The search result changed since you submitted your search request. Documents might be displayed in a different sort order.
  • search hit 36 of 523
Back to Result List

Bayesian deep learning for error estimation in the analysis of anomalous diffusion

  • Sprache Englisch Modern single-particle-tracking techniques produce extensive time-series of diffusive motion in a wide variety of systems, from single-molecule motion in living-cells to movement ecology. The quest is to decipher the physical mechanisms encoded in the data and thus to better understand the probed systems. We here augment recently proposed machine-learning techniques for decoding anomalous-diffusion data to include an uncertainty estimate in addition to the predicted output. To avoid the Black-Box-Problem a Bayesian-Deep-Learning technique named Stochastic-Weight-Averaging-Gaussian is used to train models for both the classification of the diffusionmodel and the regression of the anomalous diffusion exponent of single-particle-trajectories. Evaluating their performance, we find that these models can achieve a wellcalibrated error estimate while maintaining high prediction accuracies. In the analysis of the output uncertainty predictions we relate these to properties of the underlying diffusion models, thus providingSprache Englisch Modern single-particle-tracking techniques produce extensive time-series of diffusive motion in a wide variety of systems, from single-molecule motion in living-cells to movement ecology. The quest is to decipher the physical mechanisms encoded in the data and thus to better understand the probed systems. We here augment recently proposed machine-learning techniques for decoding anomalous-diffusion data to include an uncertainty estimate in addition to the predicted output. To avoid the Black-Box-Problem a Bayesian-Deep-Learning technique named Stochastic-Weight-Averaging-Gaussian is used to train models for both the classification of the diffusionmodel and the regression of the anomalous diffusion exponent of single-particle-trajectories. Evaluating their performance, we find that these models can achieve a wellcalibrated error estimate while maintaining high prediction accuracies. In the analysis of the output uncertainty predictions we relate these to properties of the underlying diffusion models, thus providing insights into the learning process of the machine and the relevance of the output.show moreshow less

Download full text files

  • zmnr1314.pdfeng
    (1384KB)

    SHA-512:8ad0514271b851d855e2a0bb6a76c2a4f04039d930255a65b467982a675c7360a9f94fefc7b945579e1d86085f9ce285e82c5a75dad07e9b2d51bd5cde987b96

Export metadata

Additional Services

Search Google Scholar Statistics
Metadaten
Author details:Henrik SecklerORCiD, Ralf MetzlerORCiDGND
URN:urn:nbn:de:kobv:517-opus4-586025
DOI:https://doi.org/10.25932/publishup-58602
ISSN:1866-8372
Title of parent work (German):Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe
Publication series (Volume number):Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe (1314)
Publication type:Postprint
Language:English
Date of first publication:2022/11/07
Publication year:2022
Publishing institution:Universität Potsdam
Release date:2023/04/06
Tag:models; random-walk
Issue:1314
Number of pages:13
Source:Nature Communications 13 (2022), Art. 6717. DOI: 10.1038/s41467-022-34305-6
Organizational units:Mathematisch-Naturwissenschaftliche Fakultät / Institut für Physik und Astronomie
DDC classification:5 Naturwissenschaften und Mathematik / 50 Naturwissenschaften / 500 Naturwissenschaften und Mathematik
5 Naturwissenschaften und Mathematik / 53 Physik / 530 Physik
Peer review:Referiert
Publishing method:Open Access / Green Open-Access
License (German):License LogoCC-BY - Namensnennung 4.0 International
External remark:Bibliographieeintrag der Originalveröffentlichung
Accept ✔
This website uses technically necessary session cookies. By continuing to use the website, you agree to this. You can find our privacy policy here.