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Draft genome sequence, annotation, and SSR mining data of Elaeidobius kamerunicus Faust., an essential oil palm pollinating weevil

  • Elaeidobius kamerunicus Faust. (Coleoptera: Curculionidae) is an essential insect pollinator in oil palm plantations. Recently, researches have been undertaken to improve pollination efficiency using this species. A fundamental understanding of the genes related to this pollinator behavior is necessary to achieve this goal. Here, we present the draft genome sequence, annotation, and simple sequence repeat (SSR) marker data for this pollinator. In total, 34.97 Gb of sequence data from one male individual (monoisolate) were obtained using Illumina short-read platform NextSeq 500. The draft genome assembly was found to be 269.79 Mb and about 59.9% of completeness based on Benchmarking Universal Single-Copy Orthologs (BUSCO) assessment. Functional gene annotation predicted about 26.566 genes. Also, a total of 281.668 putative SSR markers were identified. This draft genome sequence is a valuable resource for understanding the population genetics, phylogenetics, dispersal patterns, and behavior of this species.

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Metadaten
Author details:Ardha ApriyantoORCiDGND, Van Basten TambunanORCiD
DOI:https://doi.org/10.1016/j.dib.2021.106745
ISSN:2352-3409
Pubmed ID:https://pubmed.ncbi.nlm.nih.gov/33537371
Title of parent work (English):Data in Brief
Publisher:Elsevier
Place of publishing:Amsterdam
Publication type:Article
Language:English
Date of first publication:2021/01/18
Publication year:2021
Release date:2023/04/21
Tag:Curculionidae; Genomics; NGS; Oil Palm; Pollinator; Simple Sequence Repeat; Weevil; Whole-genome sequencing
Volume:34
Article number:106745
Number of pages:7
Funding institution:PT. Astra Agro Lestari Tbk
Organizational units:Mathematisch-Naturwissenschaftliche Fakultät / Institut für Biochemie und Biologie
DDC classification:5 Naturwissenschaften und Mathematik / 57 Biowissenschaften; Biologie / 570 Biowissenschaften; Biologie
Peer review:Referiert
Publishing method:Open Access / Gold Open-Access
License (German):License LogoCC-BY - Namensnennung 4.0 International
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