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Extracting, quantifying, and comparing dynamical and biomechanical properties of living matter through single particle tracking

  • A panoply of new tools for tracking single particles and molecules has led to an explosion of experimental data, leading to novel insights into physical properties of living matter governing cellular development and function, health and disease. In this Perspective, we present tools to investigate the dynamics and mechanics of living systems from the molecular to cellular scale via single-particle techniques. In particular, we focus on methods to measure, interpret, and analyse complex data sets that are associated with forces, materials properties, transport, and emergent organisation phenomena within biological and soft-matter systems. Current approaches, challenges, and existing solutions in the associated fields are outlined in order to support the growing community of researchers at the interface of physics and the life sciences. Each section focuses not only on the general physical principles and the potential for understanding living matter, but also on details of practical data extraction and analysis, discussing limitations,A panoply of new tools for tracking single particles and molecules has led to an explosion of experimental data, leading to novel insights into physical properties of living matter governing cellular development and function, health and disease. In this Perspective, we present tools to investigate the dynamics and mechanics of living systems from the molecular to cellular scale via single-particle techniques. In particular, we focus on methods to measure, interpret, and analyse complex data sets that are associated with forces, materials properties, transport, and emergent organisation phenomena within biological and soft-matter systems. Current approaches, challenges, and existing solutions in the associated fields are outlined in order to support the growing community of researchers at the interface of physics and the life sciences. Each section focuses not only on the general physical principles and the potential for understanding living matter, but also on details of practical data extraction and analysis, discussing limitations, interpretation, and comparison across different experimental realisations and theoretical frameworks. Particularly relevant results are introduced as examples. While this Perspective describes living matter from a physical perspective, highlighting experimental and theoretical physics techniques relevant for such systems, it is also meant to serve as a solid starting point for researchers in the life sciences interested in the implementation of biophysical methods.show moreshow less

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Author details:Shane ScottORCiD, Matthias WeissORCiDGND, Christine Selhuber-UnkelORCiDGND, Younes F. Barooji, Adal SabriORCiDGND, Janine T. Erler, Ralf MetzlerORCiDGND, Lene B. OddershedeORCiD
DOI:https://doi.org/10.1039/d2cp01384c
ISSN:1463-9076
ISSN:1463-9084
Pubmed ID:https://pubmed.ncbi.nlm.nih.gov/36546878
Title of parent work (English):Physical chemistry, chemical physics : a journal of European Chemical Societies
Publisher:RSC Publ.
Place of publishing:Cambridge
Publication type:Article
Language:English
Date of first publication:2022/12/22
Publication year:2022
Release date:2023/12/14
Volume:25
Issue:3
Number of pages:26
First page:1513
Last Page:1537
Funding institution:Volkswagen Foundation through the Initiative "Life?" [96733]
Organizational units:Mathematisch-Naturwissenschaftliche Fakultät / Institut für Physik und Astronomie
DDC classification:5 Naturwissenschaften und Mathematik / 53 Physik / 530 Physik
Peer review:Referiert
Publishing method:Open Access / Hybrid Open-Access
License (German):License LogoCreative Commons - Namensnennung, 3.0 Deutschland
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