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Selection of protein-protein interactions of desired affinities with a bandpass circuit

  • We have developed a genetic circuit in Escherichia coli that can be used to select for protein-protein interactions of different strengths by changing antibiotic concentrations in the media. The genetic circuit links protein-protein interaction strength to beta-lactamase activity while simultaneously imposing tuneable positive and negative selection pressure for beta-lactamase activity. Cells only survive if they express interacting proteins with affinities that fall within set high- and low-pass thresholds; i.e. the circuit therefore acts as a bandpass filter for protein-protein interactions. We show that the circuit can be used to recover protein-protein interactions of desired affinity from a mixed population with a range of affinities. The circuit can also be used to select for inhibitors of protein-protein interactions of defined strength. (C) 2018 Elsevier Ltd. All rights reserved.

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Metadaten
Author details:Katherine Emily BrechunORCiD, Katja Maren ArndtORCiDGND, G. Andrew WoolleyORCiD
DOI:https://doi.org/10.1016/j.jmb.2018.11.011
ISSN:0022-2836
ISSN:1089-8638
Pubmed ID:https://pubmed.ncbi.nlm.nih.gov/30448232
Title of parent work (English):Journal of molecular biology : JMB
Publisher:Elsevier
Place of publishing:London
Publication type:Article
Language:English
Date of first publication:2018/11/15
Publication year:2018
Release date:2021/04/20
Tag:biological engineering; genetic circuit; protein-protein interactions; selection system; synthetic biology; twin-arginine translocation
Volume:431
Issue:2
Number of pages:10
First page:391
Last Page:400
Funding institution:National Institutes of HealthUnited States Department of Health & Human ServicesNational Institutes of Health (NIH) - USA [R33MH105724]; Natural Sciences and Engineering Research Council of CanadaNatural Sciences and Engineering Research Council of Canada; German Academic Exchange Service (DAAD) Deutscher Akademischer AustauschdienstDeutscher Akademischer Austausch Dienst (DAAD)
Organizational units:Mathematisch-Naturwissenschaftliche Fakultät / Institut für Biochemie und Biologie
DDC classification:5 Naturwissenschaften und Mathematik / 57 Biowissenschaften; Biologie / 570 Biowissenschaften; Biologie
Peer review:Referiert
Publishing method:Open Access / Green Open-Access
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