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A Quasi Random Walk to Model a Biological Transport Process

  • Transport molecules play a crucial role for cell viability. Amongst others, linear motors transport cargos along rope-like structures from one location of the cell to another in a stochastic fashion. Thereby each step of the motor, either forwards or backwards, bridges a fixed distance and requires several biochemical transformations, which are modeled as internal states of the motor. While moving along the rope, the motor can also detach and the walk is interrupted. We give here a mathematical formalization of such dynamics as a random process which is an extension of Random Walks, to which we add an absorbing state to model the detachment of the motor from the rope. We derive particular properties of such processes that have not been available before. Our results include description of the maximal distance reached from the starting point and the position from which detachment takes place. Finally, we apply our theoretical results to a concrete established model of the transport molecule Kinesin V.

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Metadaten
Author details:Peter Keller, Sylvie RoellyGND, Angelo VallerianiORCiDGND
DOI:https://doi.org/10.1007/s11009-013-9372-5
ISSN:1387-5841
ISSN:1573-7713
Title of parent work (English):Methodology and computing in applied probability
Publisher:Springer
Place of publishing:Dordrecht
Publication type:Article
Language:English
Year of first publication:2015
Publication year:2015
Release date:2017/03/27
Tag:Birth-and-death process; Kinesin V; Markov Chain; Molecular motor; Quasi Random Walk
Volume:17
Issue:1
Number of pages:13
First page:125
Last Page:137
Organizational units:Mathematisch-Naturwissenschaftliche Fakultät / Institut für Mathematik
Peer review:Referiert
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