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The phytohormone auxin influences virtually all aspects of plant growth and development. Auxin transport across membranes is facilitated by, among other proteins, members of the PIN-FORMED (PIN) and the structurally similar PIN-LIKES (PILS) families, which together govern directional cell-to-cell transport and intracellular accumulation of auxin. Canonical PIN proteins, which exhibit a polar localization in the plasma membrane, determine many patterning and directional growth responses. Conversely, the less-studied noncanonical PINs and PILS proteins, which mostly localize to the endoplasmic reticulum, attenuate cellular auxin responses. Here, and in the accompanying poster, we provide a brief summary of current knowledge of the structure, evolution, function and regulation of these auxin transport facilitators.
The development of the cardiovascular system in embryoid bodies deriverd from embryonic stem cells
(2004)
Transcription factors, growth factors and signal cascades capable of priming morphogenesis of heart
(2004)
Preface
(2017)
This paper reports on extremely thick and massive duricrusts in soils of two basins in the Alentejo (southern Portugal). Since different types of duricrusts (calcretes, silcretes and palycretes) have been reported from other regions in the Mediterranean, the purpose of this study was to identify the cementing agents in the duricrusts and to compare their composition in the two basins. Moreover, the study aimed at identifying the processes involved in duricrust formation, and especially the role of topography and lateral water and element transport in the landscape, and drawing conclusions about environmental conditions and time of duricrust formation.
After studying an extensive number of road cuts in the field and mapping soil patterns in parts of the two basins by manual augering, ten pedons were selected for detailed description and sampling. Thin sections were analysed under a petrographic microscope, focusing on the micromorphology and optical properties of the cementing materials. Selected samples were studied by scanning electron microscopy and energy-dispersive X-ray spectroscopy to reconfirm the optical identification. The laboratory analyses included pH, carbonate contents, and X-ray diffraction analysis.
The duricrusts in the eastern Sado basin are indurated by silica. Combination of XRD and thin section analysis allowed to identify opal-CT as a major component, while opal-A is present to a lesser extent, and chalcedony is very rare. The cementing materials of the duricrusts in the Oriola basin are palygorskite and calcite, which may occur alone or in combination within a soil profile.
The thick duricrusts formed in the basins through precipitation of calcite, palygorskite and silica from lateral water flows, which ran from the Serra de Portel into the basins, during short moist seasons in a generally warm, semi-arid climate with strong evapotranspiration. Lithology of the upper catchment areas (element sources) and topography control the spatial distribution of the different duricrusts. Their formation took place mainly during the Pliocene. Palygorskite transformation to smectite in the upper parts of the palycretes indicates that palygorskite is unstable in the present (more humid, typical Mediterranean) climate. This study demonstrates the potential role of lateral water and element transport in landscapes that need to be considered in pedological studies and concepts, and the use of mineral indicators of past climates such as palygorskite and the ageing stage of silica precipitations as tools for reconstructing environmental conditions and possible time of duricrust formation.
Here were report the combination of biocompatible click chemistry of omega-azidosphinganine with fluorescence microscopy and mass spectrometry as a powerful tool to elaborate the sphingolipid metabolism. The azide probe was efficiently synthesized over 13 steps starting from l-serine in an overall yield of 20% and was used for live-cell fluorescence imaging of the endoplasmic reticulum in living cells by bioorthogonal click reaction with a DBCO-labeled fluorophore revealing that the incorporated analogue is mainly localized in the endoplasmic membrane like the endogenous species. A LC-MS(/MS)-based microsomal in vitro assay confirmed that omega-azidosphinganine mimics the natural species enabling the identification and analysis of metabolic breakdown products of sphinganine as a key starting intermediate in the complex sphingolipid biosynthetic pathways. Furthermore, the sphinganine-fluorophore conjugate after click reaction was enzymatically tolerated to form its dihydroceramide and ceramide metabolites. Thus, omega-azidosphinganine represents a useful biofunctional tool for metabolic investigations both by in vivo fluorescence imaging of the sphingolipid subcellular localization in the ER and by in vitro high-resolution mass spectrometry analysis. This should reveal novel insights of the molecular mechanisms sphingolipids and their processing enzymes have e.g. in infection.
HPI Future SOC Lab
(2015)
Das Future SOC Lab am HPI ist eine Kooperation des Hasso-Plattner-Instituts mit verschiedenen Industriepartnern. Seine Aufgabe ist die Ermöglichung und Förderung des Austausches zwischen Forschungsgemeinschaft und Industrie.
Am Lab wird interessierten Wissenschaftlern eine Infrastruktur von neuester Hard- und Software kostenfrei für Forschungszwecke zur Verfügung gestellt. Dazu zählen teilweise noch nicht am Markt verfügbare Technologien, die im normalen Hochschulbereich in der Regel nicht zu finanzieren wären, bspw. Server mit bis zu 64 Cores und 2 TB Hauptspeicher. Diese Angebote richten sich insbesondere an Wissenschaftler in den Gebieten Informatik und Wirtschaftsinformatik. Einige der Schwerpunkte sind Cloud Computing, Parallelisierung und In-Memory Technologien.
In diesem Technischen Bericht werden die Ergebnisse der Forschungsprojekte des Jahres 2015 vorgestellt. Ausgewählte Projekte stellten ihre Ergebnisse am 15. April 2015 und 4. November 2015 im Rahmen der Future SOC Lab Tag Veranstaltungen vor.