Refine
Year of publication
Is part of the Bibliography
- yes (49)
Keywords
- X-ray structure (7)
- EPR (4)
- copper(II) (4)
- electron paramagnetic resonance (4)
- Ionic liquids (3)
- tetrabromidocuprate(II) (3)
- Alkylpyridinium salts (2)
- Copper (2)
- Copper(II) (2)
- Crystal structure (2)
Institute
Six N-alkylpyridinium salts [CnPy](2)[MCl4] (n = 4 or 12 and M = Co, Cu, Zn) were synthesized, and their structure and thermal properties were studied. The [C4Py](2)[MCl4] compounds are monoclinic and crystallize in the space group P2(1)/n. The crystals of the longer chain analogues [C12Py](2)[MCl4] are triclinic and crystallize in the space group P (1) over bar. Above the melting temperature, all compounds are ionic liquids (ILs). The derivatives with the longer C12 chain exhibit liquid crystallinity and the shorter chain compounds only show a melting transition. Consistent with single-crystal analysis, electron paramagnetic resonance spectroscopy suggests that the [CuCl4](2-) ions in the Cu-based ILs have a distorted tetrahedral geometry.
Six N-alkylpyridinium salts [CnPy](2)[MCl4] (n = 4 or 12 and M = Co, Cu, Zn) were synthesized, and their structure and thermal properties were studied. The [C4Py](2)[MCl4] compounds are monoclinic and crystallize in the space group P2(1)/n. The crystals of the longer chain analogues [C12Py](2)[MCl4] are triclinic and crystallize in the space group P (1) over bar. Above the melting temperature, all compounds are ionic liquids (ILs). The derivatives with the longer C12 chain exhibit liquid crystallinity and the shorter chain compounds only show a melting transition. Consistent with single-crystal analysis, electron paramagnetic resonance spectroscopy suggests that the [CuCl4](2-) ions in the Cu-based ILs have a distorted tetrahedral geometry.
A series of new 2 2'-bipyridine/1 2-dithiolate transition metal complexes has been synthesised and characterised As 1,2-dithiolate ligands 1,2 dithiooxalate (dto) and 1 2-dithiosquarate (dtsq) were used It follows from the IR spectra that the multidentate dithiolate ligands coordinate exclusively via their sulfur atoms forming an MN2S2 coordination sphere The central metal ions (M) are Cu2+ Ni2+ Pd2+ Pt2+, and Zn2+ The complex [Cu-II(bpy)(dto)] could be studied by EPR spectroscopy and was measured as powder diamagnetically diluted in the isostructural [Ni-II(bpy)(dto)] host structure The spin density contribution calculated from the experimental parameters is compared with the electronic situation in the frontier orbitals namely in the semi occupied SOMO of the copper complex derived from quantum chemical calculations on different levels (EHT and DFT)
A series of new N2S2 mixed ligand transition metal complexes, where N-2 is phenanthroline and S-2 is 1,2- dithiooxalate (dto) or 1,2-dithiosquarate (dtsq), has been synthesized and characterized. IR spectra reveal that the 1,2- dithiolate ligands are coordinated via the sulfur atoms forming a N2S2 coordination sphere. The copper(II) complex [Cu(phen)(dto)] was studied by EPR spectroscopy as a diamagnetically diluted powder. The diamagnetic dilution resulted from doping of the copper complex into the isostructural host lattice of the nickel complex [Ni(phen)(dto)]. The electronic situation in the frontier orbitals of the copper complex calculated from the experimental data is compared to the results of EHT and DFT calculations. Furthermore, one side product, chlorobis(1,10-phenanthroline)copper(I) ethanol solvate hydrate [(phen)(2)CuCl]center dot C2H5OH center dot H2O, was formed by a reduction process and characterized by X-ray diffraction. In the crystal packing one-dimensional columns of dimers are formed, stabilized by significant pi-pi interactions.
A series of new heteroleptic MN2S2 transition metal complexes with M = Cu2+ for EPR measurements and as diamagnetic hosts Ni2+, Zn2+, and Pd2+ were synthesized and characterized. The ligands are N2 = 4, 4'-bis(tert-butyl)-2, 2'-bipyridine (tBu2bpy) and S2 =1, 2-dithiooxalate, (dto), 1, 2-dithiosquarate, (dtsq), maleonitrile-1, 2-dithiolate, or 1, 2-dicyanoethene-1, 2-dithiolate, (mnt). The CuII complexes were studied by EPR in solution and as powders, diamagnetically diluted in the isostructural planar [NiII(tBu2bpy)(S2)] or[PdII(tBu2bpy)(S2)] as well as in tetrahedrally coordinated[ZnII(tBu2bpy)(S2)] host structures to put steric stress on the coordination geometry of the central CuN2S2 unit. The spin density contributions for different geometries calculated from experimental parameters are compared with the electronic situation in the frontier orbital, namely in the semi-occupied molecular orbital (SOMO) of the copper complex, derived from quantum chemical calculations on different levels (EHT and DFT). One of the hosts, [NiII(tBu2bpy)(mnt)], is characterized by X-ray structure analysis to prove the coordination geometry. The complex crystallizes in a square-planar coordination mode in the monoclinic space group P21/a with Z = 4 and the unit cell parameters a = 10.4508(10) angstrom, b = 18.266(2) angstrom, c = 12.6566(12) angstrom, beta = 112.095(7)degrees. Oxidation and reductions potentials of one of the host complexes, [Ni(tBu2bpy)(mnt)], were obtained by cyclovoltammetric measurements.
4,4 '-Bis(tert-butyl)-2,2 '-bipyridinedichlorometal(II) - Synthesis, structure and EPR spectroscopy
(2011)
Due to the better solubility of the 4,4'-substituted bipyridine ligand a series of 4,4'0-bis(tert-butyl)-2,2'-bipyridinedichlorometal(II) complexes, [M(tbbpy)Cl(2)], with M = Cu, Ni, Zn, Pd, Pt was synthesised and characterised. The blue copper complex 4,4'-bis(tert-butyl)-2,2'-bipyridinedichlorocopper(II) was isolated in two different polymorphic forms, as prisms 1 with a solvent inclusion and solvent-free as needles 2. Both structures were determined by X-ray structure analysis. They crystallise in the monoclinic space group P2(1)/c with four molecules in the unit cell, but with different unit cells and packing motifs. Whereas in the prisms 1, with the unit cell parameters a = 12.1613(12), b = 10.6363(7), c = 16.3074(15) angstrom, eta = 94.446(8)degrees, the packing is dominated by intra-and intermolecular hydrogen bonds, in the needles 2, with a = 7.738(1), b = 18. 333(2), c = 13.291(3) angstrom, beta = 97.512(15)degrees, only intramolecular hydrogen bonds appear and the complex molecules are arranged in columns which are stabilised by p-p-stacking interactions. In both complexes the copper has a tetrahedrally distorted coordination sphere. These copper complexes were also studied by EPR spectroscopy in solution, as frozen glass and diamagnetically diluted powder with the analogue [Pd(tbbpy)Cl(2)] as host lattice.
We report on attempts towards the synthesis of titanium nanoparticles using a wet chemical approach in imidazolium-based ionic liquids (ILs) under reducing conditions. Transmission electron microscopy finds nanoparticles in all cases. UV/Vis spectroscopy confirms the nanoparticulate nature of the precipitate, as in all cases an absorption band between ca. 280 and 300 nm is visible. IR spectroscopy shows that even after extensive washing and drying, some IL remains adsorbed on the nanoparticles. Raman spectroscopy suggests the formation of anatase nanoparticles, but X-ray diffraction reveals that, possibly, amorphous titania forms or that the nanoparticles are so small that a clear structure assignment is not possible. The report thus shows that (possibly amorphous) titanium oxides even form under reducing conditions and that the chemical synthesis of titanium nanoparticles in ILs remains elusive.
Magnetotactic bacteria produce chains of magnetite nanoparticles, which are called magnetosomes and are used for navigational purposes. We use these cells as a biological template to prepare a hollow hybrid material based on silica and magnetite, and show that the synthetic route is nondestructive as the material conserves the cell morphology as well as the alignment of the magnetic particles. The hybrid material can be resuspended in aqueous solution, and can be shown to orient itself in an external magnetic field. We anticipate that chemical modification of the silica can be used to functionalize the material surface in order to obtain multifunctional materials with specialized applications, e.g. targeted drug delivery.
Tetrahalidocuprates(II) show a high degree of structural flexibility. We present the results of crystallographic and electron paramagnetic resonance (EPR) spectroscopic analyses of four new tetrabromidocuprate(II) compounds and compare the results with previously reported data. The cations in the new compounds are the sterically demanding benzyltriphenylphosphonium, methyltriphenylphosphonium, tetraphenylphosphonium, and hexadecyltrimethylammonium ions; they were used to achieve a reasonable separation of the paramagnetic Cu(II) ions for EPR spectroscopy. X-Ray crystallography shows that in all four complexes the [CuBr4](2-) units have a distorted tetrahedral coordination geometry which is in agreement with DFT calculations. The EPR hyperfine structure was not resolved. This is due to the exchange broadening resulting from still incomplete separation of the paramagnetic Cu(II) centres. Nevertheless, the principal values of the electron Zeemann tensor (g(parallel to) and g(perpendicular to)) of the complexes could be determined. A correlation of structural (X-ray) parameters with the spin density at the copper centres (DFT) is well reflected in the EPR spectra of the bromidocuprates. This enables the correlation of X-ray and EPR parameters to predict the structure of tetrabromidocuprates in physical states other than the crystalline state. As a result, we provide a method to structurally characterize [CuBr4](2-) in, for example, ionic liquids or in solution, which has important implications for e.g. catalysis or materials science.
An anionic microporous polymer network prepared by the polymerization of weakly coordinating anions
(2013)
Magnetosome Organization in Magnetotactic Bacteria Unraveled by Ferromagnetic Resonance Spectroscopy
(2017)
Magnetotactic bacteria form assemblies of magnetic nanoparticles called magnetosomes. These magnetosomes are typically arranged in chains, but other forms of assemblies such as clusters can be observed in some species and genetic mutants. As such, the bacteria have developed as a model for the understanding of how organization of particles can influence the magnetic properties. Here, we use ferromagnetic resonance spectroscopy to measure the magnetic anisotropies in different strains of Magnetosprillum gtyphiswaldense MSR-1, a bacterial species that is amendable to genetic mutations. We combine our experimental results with a model describing the spectra. The model includes chain imperfections and misalignments following a Fisher distribution function, in addition to the intrinsic magnetic properties of the magnetosomes. Therefore, by applying the model to analyze the ferromagnetic resonance data, the distribution of orientations in the bulk sample can be retrieved in addition to the average magnetosome arrangement. In this way, we quantitatively characterize the magnetosome arrangement in both wild-type cells and Delta mamJ mutants, which exhibit differing magnetosome organization.
Deprotonation of ligand-appended alkoxyl groups in mononuclear copper(II) complexes of N,O ligands L-1 and L-2, gave dinuclear complexes sharing symmetrical Cu2O2 cores. Molecular structures of these mono-and binuclear complexes have been characterized by XRD, and their electronic structures by UV/Vis, H-1 NMR, EPR and DFT; moreover, catalytic performance as models of catechol oxidase was studied. The binuclear complexes with anti-ferromagnetically coupled copper(II) centers are moderately active in quinone formation from 3,5-di-tert-butyl-catechol under the estab-lished conditions of oxygen saturation, but are strongly activated when additional dioxygen is administered during catalytic turnover. This unforeseen and unprecedented effect is attributed to increased maximum reaction rates v(max), whereas the substrate affinity KM remains unaffected. Oxygen administration is capable of (partially) removing limitations to turnover caused by product inhibition. Because product inhibition is generally accepted to be a major limitation of catechol oxidase models, we think that our observations will be applicable more widely.
Nicotinamide (nia) has been employed as a supramolecular reagent in the synthesis of four copper(II) chloro- and dichlorobenzoate (Clbz/Cl(2)bz) complexes. The structures of the compounds [Cu(2-Clbz)(2) (nia)(2)(H2O)(2)] (1), icu(4-clbz)(2)(nia)(2)(H2O)(2)] (2), [Cu(3,5-Cl(2)bz)(2)(nia)(2)(H2O)(2)] (3), and [Cu(2,5-Cl(2)bz)(2) (nia)(2)(H2O)]center dot H2O (4) were determined. All the investigated compounds 1-4 reveal water molecules as coordinated. Their structures show distorted octahedral chromophores (CuN2O2O)-N-II'(2), though some are better described as square-planar or square-pyramid due to a large deviation of the axial ligand away from the octahedral z-axis along with different Cu center dot center dot center dot O (axial) lengths. The equatorial positions are occupied in all four cases by two nitrogen (nia-py) atoms and two carboxylate oxygen atoms of two Clbz/Cl(2)bz ligands, while the axial positions are occupied by water molecules. The EPR spectra reveal for all 1-4 compounds a spin state of S = 1/2, mostly with axial symmetry of the spectra. Their resolution is clearly dependant to the crystal symmetry related equivalence of the magnetic sites. The coordination molecules of all compounds are connected by N-H center dot center dot center dot O and O-H center dot center dot center dot O H-bonds from nicotinamide NH2 groups, carboxylate anions and/or water molecules, which create supramolecular chains or further H-bonded into 2D sheets. Steric hindering of the chlorine atoms of the Clbz/Cl(2)bz, especially seen at the coordination of the water molecules, demonstrates its role at the coordination sphere appearance. Despite this influence, the water molecules in 1-4 always assist at the similar supramolecular H-bonded network, almost at the same manner.
Four copper(II) coordination compounds with the neutral ligand bis(3,5-dimethylpyrazol-1-yl)acetic acid (Hbdmpza, C(12)H(16)N(4)O(2)) and its anionic form (bdmpza(-)), namely [Cu(Hbdmpza)(2)](HSO(4))(2) (1), [Cu(Hbdmpza)(2)]Cl(2) (2), [Cu(bdmpza)(2)](CH(3)COOH)(H(2)O) (3), and [Cu(bdmpza)(2)][Cu(2)(O(2)CCH(3))(4)] (4) have been synthesized starting from different metal salts. All the compounds have been fully characterized by physical and analytical methods. In addition, a single-crystal XRD analysis revealed the 3D structure of 1, which exhibits tridentate, vicinal N,N,O-coordination of two symmetry-related Hbdmpza ligands in an elongated octahedral arrangement with four equatorial nitrogen atoms and two axial oxygen atoms. The neutral carboxylic moiety acts as a hydrogen-bond donor to a HSO(4)(-) counterion. The two hydrogensulfates form a unique hydrogen-bonded pair (HSO(4)(-))(2) with very short O center dot center dot center dot O distances (2.59 angstrom) bridged between adjacent [Cu(HL)(2)](2+) coordination units. Also a short O center dot center dot center dot O contact (2.54 angstrom) is present between the C-OH and an 0 of a hydrogensulfate. A characteristic IR C=O vibration is observed at 1700 cm(-1) for 1 and 2, whereas the v(as)(O(2)C) vibration is present at 1650 cm(-1) for 3 and 4. These IR data strongly suggest the presence of Hbdmpza ligands in 1 and 2 and the deprotonated form bdmpza- in 3 and 4. A mononuclear coordination unit [CuL(2)], as proven for 1 by X-ray diffraction, is also proposed for the other compounds 2-4. In compound 4, an additional dinuclear [Cu(2)(O(2)CCH(3))(4)] neutral coordination unit is present, as deduced from the vibration bands v(as)(O(2)C) at 1600 cm(-1) and v(s)(O(2)C) at 1420 cm(-1), which are typical of a carboxylate function, and from the two-species analysis of the chi(M)T(T) curve of the magnetic susceptibility data (2J = -322 cm(-1)). Also, the EPR spectra recorded at different temperatures agree with this structure.
The crystal structure of cis-[Cu(C8H7O3)(2)(H2O)(2)] (115 K data) reveals bidentate vanillinate ions coordinated via methoxy and deprotonated hydroxy oxygen atoms and water molecules in a distorted octahedral CuO6 chromophore. A cis orientation of the ligands enables two non-identical O(methoxy)-Cu-O(water) coordination axes (2.354(l) + 2.163(1); 2.151(1) + 2.020(1) angstrom), and the third shortest O(hydroxy)-Cu-O(hydroxy) axis (1.919(1) + 1.914(1) angstrom). This 115 K coordination sphere differs importantly to the one obtained from the 293 K data of the same compound, where two long 0(methoxy)-Cu-O(water) axes are of the same length, and only minor changes at the short 0(hydroxy)-Cu-O(hydroxy) axis are noticed. An axial symmetry of the complex with an inverse g(1.2)(g(perpendicular to)) > g(3)(g(parallel to)) pattern is observed in the temperature range from 298 to 180 K. A further decrease of temperature reveals gradual changes from axial to rhombic symmetry (g(1) > g(2) > g(3)) that is reversible. A mean-square displacement amplitude (MDSA) analysis reveals a disorder in the Cu-O(methoxy) bonds, but not in the other metal-ligand Cu-O(hydroxy) and Cu-O(water) bonds at 293 and 115 K. The disorder is significantly weaker in the 115 K structure. The MSDA analysis and the structural-EPR agreement show vibrational disorder in two coordination axes, due to the cis conformation of the complex with two 0(methoxy)-Cu-O(water) axes.
In order to elucidate the interactions of copper with wood, three mononuclear copper(II) coordination compounds with a vanillinate anion, cis-[Cu(C8H7O3)(2)(H2O)(2)] (1), trans-[Cu(C8H7O3)(2)(H2O)(2)].2H(2)O (2), and trans- [Cu(C8H7O3)(2)(H2O)(2)] (3), have been characterized. X-ray structure analysis of the cis isomer 1 reveals two bidentate vanillinate ions coordinated via methoxy (Cu-O1 2.260(2) angstrom) and deprotonated hydroxy oxygen atoms (Cu-O2 1.909(2) angstrom), and two water molecules (Cu-O1w 2.087(2) angstrom) in the octahedral CuO6 chromophore. Two axes O1-Cu- O1w' in the octahedron have the same length, while the third axis O2-Cu-O2' is shorter. This is in agreement with the room temperature EPR spectrum of 1, showing two signals (g(12) 2.302, g(3) 2.005), but interestingly, three signals (g(1) 2.393, g(2) 2.214, g(3) 2.010) in the 115 K spectrum were found. The same coordination atoms were found also in the trans isomer 2 (Cu-O2 1.950(2), Cu-O1w 1.994(2), Cu-O1 2.334(2) angstrom), however here, two axes of almost equal length are short (O2-Cu-O2' O1w-Cu-O1w'), while the third axis is longer (O1-Cu-O1'). On the other hand, three (rhombic) signals (g(1) 2.289, g(2) 2.163, g(3) 2.086) in the room temperature EPR spectrum of 2 suggest three different axes in the coordination octahedron. In the EPR spectrum, of the second trans complex 3, a slightly rhombically distorted elongated axial spectrum is found. The 115 K EPR spectra of the two trans complexes 2 and 3 do not differ significantly from the features observed at room temperature. These results indicate that there is not always a straightforward correlation between the results of XRD structure analysis and EPR spectroscopy. Nevertheless, both methods can act also complementarily and give a deeper insight into the nature of copper(II) chromophores
A new ionic compound (C5H6NO)(2)[CU2(mu-O2CH)(4)(O2CH)(2)], 1 formed of 4-hydroxypyridinium cations and a complex anion was synthesized. The anion is a paddle-wheel dicopper carboxylate complex with four syn,syn-bridging and two axial anionic methanoato ligands. The XRD structure determination of 1 reveals that the molecular structure is stabilized by two H-bonds between the cations and the axial paddle-wheel anions (N-H center dot center dot center dot O 2.755(3), O-H center dot center dot center dot O 2.489(2) angstrom). The compound exhibits a very strong (2J = 500 cm(- 1)) intra-binuclear anti ferromagnetic interaction noticed already at room temperature attributed to the methanoato intra-binuclear bridges. The typical EPR S = 1 spin system signals of the dicopper paddle-wheel complexes at 90 and 450- 700 mT are found in the room temperature spectrum, but they are poorly seen in the 110 K spectrum. These signals are of very low intensity and are accompanied by a dominant signal at 320 mT, all closely related to a very strong anti ferromagnetic interaction present in 1.
Several copper(II) methanoato complexes, namely mononuclear [Cu(O2CH)(2)(2-mpy)(2)] (1) (2-mpy = 2- methylpyridine), binuclear [Cu-2(mu-O2CH)(4)(2-mpy)(2)] (2), and the polynuclear {[Cu(mu-O2CH)(2)(2-mpy)(2)] [Cu-2(mu- O2CH)(4)]}(n) (3) and {Na-2[Cu(mu-O2CH)(2)(O2CH)(2)][Cu-2(mu-O2CH)(4)]}(n) (4), have been synthesized. The mononuclear complex I is formed by two asymmetric chelate methanoate anions and two 2-methylpyridine molecules, giving a highly distorted 'elongated octahedral' coordination sphere. Complex I decomposes outside the mother-liquid, transforming into a regular isolated binuclear paddle-wheel complex 2 with four intra-binuclear bridging methanoates and two axial 2-mpy ligands. The polynuclear complex 3 is formed of alternate mononuclear and binuclear building blocks resembling the central cores of I and 2, but with significant differences, especially for the methanoates of the mononuclear units. The oxygen atom of the mononuclear unit in the octahedral axial position in 3 is simultaneously coordinated to the axial position of the binuclear paddle-wheel central core, thus enabling a chain type of structure. A chain of alternate mononuclear and binuclear building blocks, as in the neutral compound 3. are found as well in the ionic polymeric compound 4, though two types of bridges are found in 4, while there is only one type in 3. Namely, the axial position of the octahedral mononuclear unit in 4 is occupied by the methanoate oxygen atom that is already a part of the binuclear paddle-wheel unit, while one equatorial methanoate from the mononuclear unit serves as a triatomic bridge to the axial position of the binuclear building block. A very strong antiferromagnetic interaction is found for all the complexes with the paddle-wheel building blocks [Cu-2(mu-O2CH)(4)] 2-4 (-2J = 444-482 cm(-1)), attributed to the methanoate intra-binuclear bridges. On the other hand, this strong antiferromagnetism, found already at room temperature, reduces the intensity of the EPR S = 1 spin signals reported for the isolated paddle-wheel complex 2. For the polymeric 3, only the spin S = 1/2 signals are found in the EPR spectra, and they are assigned to the mononuclear building blocks. No signals with a clear origin are however seen in the room temperature EPR spectrum of the polymeric analogue 4, only the S = 1/2 signals in the low temperature spectra. This feature is suggested to be due to a specific influence between the adjacent S = 1 (binuclear) and S = 1/2 (mononuclear) species via their bridges.
Two copper(II) coordination compounds with vanillic acid C8H8O4 (1), namely [Cu- 2(C8H7O4)(2)(O2CCH3)(2)(CH3OH)(2)] (2) and [Cu-2(C8H7O4)(4)(H2O2)(2)] (3), were synthesized and characterized. Single crystals of 1-3 were obtained and their crystal structures determined. The structure of 2 shows dinuclear cage structure of copper acetate hydrate type, however with two different carboxylates, acetates and vanillic acid anions,. respectively. Both bridging anions are in pairs in trans orientation. Methanol molecules are apically coordinated (Cu-O7 2.160(2) angstrom), fulfilling square-pyramidal coordination sphere around both copper ions. The compound 2 decomposes outside mother-liquid (yielding [Cu-2(C8H7O4)(2)(O2CCH3)(2)(H2O)(2)] (2a)) with the removal of methanol, but without significant change of the dicopper tetracarboxylate cage structure, as noticed by mu(eff) 1.48 BM for 2a. Similar was found also in the X-band EPR spectra with three signals H-z1, H-perpendicular to 2 and H-z2 in the region from 0 to 600 mT. The structure of free vanillic acid 1 is composed of dimeric units of two molecules, connected by two parallel hydrogen bonds between carboxylate group of each other (O1-H(...)O2 2.642(3) angstrom), while the structure of 3 is of [Cu-2(O2CCH3)(4)(H2O)(2)] type. Interestingly, an additional signal in the EPR spectra of 3 is found at 80 mT (H- perpendicular to 1) at 298 and at 116 K, next to three signals H-z1, H-perpendicular to 2 and H-z2.