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Environmental Drivers of Free-Living vs. Particle-Attached Bacterial Community Composition in the Mauritania Upwelling System

  • Saharan dust input and seasonal upwelling along North-West Africa provide a model system for studying microbial processes related to the export and recycling of nutrients. This study offers the first molecular characterization of prokaryotic particle-attached (PA; > 3.0 mu m) and free-living (FL; 0.2-3.0 mu m) players in this important ecosystem during August 2016. Environmental drivers for alpha-diversity, bacterial community composition, and differences between FL and PA fractions were identified. The ultra-oligotrophic waters off Senegal were dominated by Cyanobacteria while higher relative abundances of Alphaproteobacteria, Bacteroidetes, Verrucomicrobia, and Planctomycetes (known particle-degraders) occurred in the upwelling area. Temperature, proxy for different water masses, was the best predictor for changes in FL communities. PA community variation was best explained by temperature and ammonium. Bray Curtis dissimilarities between FL and PA were generally very high and correlated with temperature and salinity in surfaceSaharan dust input and seasonal upwelling along North-West Africa provide a model system for studying microbial processes related to the export and recycling of nutrients. This study offers the first molecular characterization of prokaryotic particle-attached (PA; > 3.0 mu m) and free-living (FL; 0.2-3.0 mu m) players in this important ecosystem during August 2016. Environmental drivers for alpha-diversity, bacterial community composition, and differences between FL and PA fractions were identified. The ultra-oligotrophic waters off Senegal were dominated by Cyanobacteria while higher relative abundances of Alphaproteobacteria, Bacteroidetes, Verrucomicrobia, and Planctomycetes (known particle-degraders) occurred in the upwelling area. Temperature, proxy for different water masses, was the best predictor for changes in FL communities. PA community variation was best explained by temperature and ammonium. Bray Curtis dissimilarities between FL and PA were generally very high and correlated with temperature and salinity in surface waters. Greatest similarities between FL and PA occurred at the deep chlorophyll maximum, where bacterial substrate availability was likely highest. This indicates that environmental drivers do not only influence changes among FL and PA communities but also differences between them. This could provide an explanation for contradicting results obtained by different studies regarding the dissimilarity/similarity between FL and PA communities and their biogeochemical functions.show moreshow less

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Author details:Jennifer Bachmann, Tabea Heimbach, Christiane HassenrückORCiD, German A. KopprioORCiD, Morten Hvitfeldt Iversen, Hans-Peter GrossartORCiDGND, Astrid Gärdes
DOI:https://doi.org/10.3389/fmicb.2018.02836
ISSN:1664-302X
Pubmed ID:https://pubmed.ncbi.nlm.nih.gov/30532746
Title of parent work (English):Frontiers in microbiology
Publisher:Frontiers Research Foundation
Place of publishing:Lausanne
Publication type:Article
Language:English
Date of first publication:2018/11/23
Publication year:2018
Release date:2021/06/30
Tag:16S rRNA Illumina amplicon sequencing; Bray Curtis dissimilarity; alpha diversity; biodiversity; microbial ecology; prokaryotes; salinity; temperature
Volume:9
Number of pages:13
Funding institution:DFGGerman Research Foundation (DFG) [GR1540/28-1, IV124/3-1]; BMBFFederal Ministry of Education & Research (BMBF) [01DG12073B]; Leibniz Association [SAW-2015-ZMT-4]; HGF Young Investigator Group SeaPump "Seasonal and regional food web interactions with the biological pump" [VH-NG-1000]
Organizational units:Mathematisch-Naturwissenschaftliche Fakultät / Institut für Biochemie und Biologie
DDC classification:5 Naturwissenschaften und Mathematik / 57 Biowissenschaften; Biologie / 570 Biowissenschaften; Biologie
License (German):License LogoCC-BY - Namensnennung 4.0 International
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