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SynBioWave : a real-time communication platform for molecular and synthetic biology

  • Synthetic Biology is advanced by many users and relies on the assembly of genetic elements to devices, systems and finally genomes. SynBioWave is a software suite that enables multiple distributed users to analyze and construct genetic parts in real-time collaboration. It builds on Google Wave and provides an extensible robot-robot-user communication framework, a menu driven user interface, biological data handling including DAS and an internal database communication. We demonstrate its use by implementing robots for gene-data retrieval, manipulation and display. The initial development of SynBioWave demonstrates the power of the underlying Google Wave protocol for Synthetic Biology and lays the foundation for continuous and user-friendly extensions. Specialized wave-robots with a manageable set of capabilities will divide and conquer the complex task of creating a genome in silico.

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Author details:Paul R. Staab, Jörg Walossek, David Nellessen, Raik Grünberg, Katja Maren ArndtORCiDGND, Kristian M. Müller
URL:http://bioinformatics.oxfordjournals.org/
DOI:https://doi.org/10.1093/bioinformatics/btq518
ISSN:1367-4803
Publication type:Article
Language:English
Year of first publication:2010
Publication year:2010
Release date:2017/03/25
Source:Bioinformatics. - ISSN 1367-4803. - 26 (2010), 21, S. 2782 - 2783
Organizational units:Mathematisch-Naturwissenschaftliche Fakultät / Institut für Biochemie und Biologie
Peer review:Referiert
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