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"Out of Pocket" protein binding

  • The epitope imprinting approach applies exposed peptides as templates to synthesize Molecularly Imprinted Polymers (MIPs) for the recognition of the parent protein. While generally the template protein binding to such MIPs is considered to occur via the epitope-shaped cavities, unspecific interactions of the analyte with non-imprinted polymer as well as the detection method used may add to the complexity and interpretation of the target rebinding. To get new insights on the effects governing the rebinding of analytes, we electrosynthesized two epitope-imprinted polymers using the N-terminal pentapeptide VHLTP-amide of human hemoglobin (HbA) as the template. MIPs were prepared either by single-step electrosynthesis of scopoletin/pentapeptide mixtures or electropolymerization was performed after chemisorption of the cysteine extended VHLTP peptide. Rebinding of the target peptide and the parent HbA protein to the MIP nanofilms was quantified by square wave voltammetry using a redox probe gating, surface enhanced infrared absorptionThe epitope imprinting approach applies exposed peptides as templates to synthesize Molecularly Imprinted Polymers (MIPs) for the recognition of the parent protein. While generally the template protein binding to such MIPs is considered to occur via the epitope-shaped cavities, unspecific interactions of the analyte with non-imprinted polymer as well as the detection method used may add to the complexity and interpretation of the target rebinding. To get new insights on the effects governing the rebinding of analytes, we electrosynthesized two epitope-imprinted polymers using the N-terminal pentapeptide VHLTP-amide of human hemoglobin (HbA) as the template. MIPs were prepared either by single-step electrosynthesis of scopoletin/pentapeptide mixtures or electropolymerization was performed after chemisorption of the cysteine extended VHLTP peptide. Rebinding of the target peptide and the parent HbA protein to the MIP nanofilms was quantified by square wave voltammetry using a redox probe gating, surface enhanced infrared absorption spectroscopy, and atomic force microscopy. While binding of the pentapeptide shows large influence of the amino acid sequence, all three methods revealed strong non-specific binding of HbA to both polyscopoletin-based MIPs with even higher affinities than the target peptides.show moreshow less

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Author details:Xiaorong ZhangGND, Giorgio Caserta, Aysu YarmanORCiDGND, Eszter Supala, Armel Franklin Tadjoung WaffoORCiD, Ulla WollenbergerORCiDGND, Robert E. Gyurcsanyi, Ingo ZebgerORCiDGND, Frieder W. SchellerORCiDGND
DOI:https://doi.org/10.3390/chemosensors9060128
ISSN:2227-9040
Title of parent work (English):Chemosensors
Subtitle (German):a dilemma of epitope imprinted polymers revealed for human hemoglobin
Publisher:MDPI
Place of publishing:Basel
Publication type:Article
Language:English
Date of first publication:2021/06/03
Publication year:2021
Release date:2024/01/22
Tag:Molecularly Imprinted Polymers; SEIRA spectroelectrochemistry; binding; epitope imprinting; non-specific; redox gating
Volume:9
Issue:6
Article number:128
Number of pages:13
Funding institution:Deutsche Forschungsgemeinschaft (D.F.G., German Research Foundation)German Research Foundation (DFG) [EXC 2008-390540038-UniSysCat]; EU within the European Union's Horizon 2020 research and innovation program [810856]; Einstein Foundation Berlin [EVF-2016-277]; BME Nanotechnology and Materials Science TKP2020 IE grant of NKFIH Hungary (BME IE-NATTKP2020)National Research, Development & Innovation Office (NRDIO) - Hungary
Organizational units:Mathematisch-Naturwissenschaftliche Fakultät / Institut für Biochemie und Biologie
DDC classification:5 Naturwissenschaften und Mathematik / 54 Chemie / 540 Chemie und zugeordnete Wissenschaften
Peer review:Referiert
Publishing method:DOAJ gelistet
License (German):License LogoCC-BY - Namensnennung 4.0 International
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