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Genome-scale metabolic models are mathematical representations of all known reactions occurring in a cell. Combined with constraints based on physiological measurements, these models have been used to accurately predict metabolic fluxes and effects of perturbations (e.g. knock-outs) and to inform metabolic engineering strategies. Recently, protein-constrained models have been shown to increase predictive potential (especially in overflow metabolism), while alleviating the need for measurement of nutrient uptake rates. The resulting modelling frameworks quantify the upkeep cost of a certain metabolic flux as the minimum amount of enzyme required for catalysis. These improvements are based on the use of in vitro turnover numbers or in vivo apparent catalytic rates of enzymes for model parameterization. In this thesis several tools for the estimation and refinement of these parameters based on in vivo proteomics data of Escherichia coli, Saccharomyces cerevisiae, and Chlamydomonas reinhardtii have been developed and applied. The difference between in vitro and in vivo catalytic rate measures for the three microorganisms was systematically analyzed. The results for the facultatively heterotrophic microalga C. reinhardtii considerably expanded the apparent catalytic rate estimates for photosynthetic organisms. Our general finding pointed at a global reduction of enzyme efficiency in heterotrophy compared to other growth scenarios. Independent of the modelled organism, in vivo estimates were shown to improve accuracy of predictions of protein abundances compared to in vitro values for turnover numbers. To further improve the protein abundance predictions, machine learning models were trained that integrate features derived from protein-constrained modelling and codon usage. Combining the two types of features outperformed single feature models and yielded good prediction results without relying on experimental transcriptomic data. The presented work reports valuable advances in the prediction of enzyme allocation in unseen scenarios using protein constrained metabolic models. It marks the first successful application of this modelling framework in the biotechnological important taxon of green microalgae, substantially increasing our knowledge of the enzyme catalytic landscape of phototrophic microorganisms.
Jews and Muslims have lived in the territory of modern-day Austria for centuries untold, yet often continue to be construed as the essential “other.” This essay explores a selection of sometimes divergent, sometimes convergent historical experiences amongst these two broad population groups, focusing specifically on demographic diversity, community-building, discrimination and persecution, and the post-war situation. The ultimate aim is to illuminate paradigmatically through the Austrian case study the complex multicultural mosaic of historical Central Europe, the understanding of which, so our contention, sheds a critical light on the often divisive present-day debates concerning immigration and diversity in Austria and Central Europe more broadly. It furthermore opens up a hitherto understudied field of historical research, namely the entangled history of Jews and Muslims in modern Europe.
The Jewish museums established in the fin-de-siècle Habsburg Empire postulated the unity of “the Jewish people,” with custodians constructing an “us” (Jews) in distinction to the “other” (non-Jews). In the difference-oriented frenzy of the time, Jewish identity was predominantly presented as Central European, enlightened, not overly religious, and middle-class. Then, when the Viennese Jewish Museum opened its doors in 1895, the painters Isidor Kaufmann and David Kohn created an installation called “Die Gute Stube” (The Parlor). This exhibit housed books, furniture, as well as decorative and ritual objects of the kind that were thought to be found in typical Eastern European Jewish households. However, as this article argues, this attempted visualization of the essence of Judaism and the range of Jewish life worlds promoted a paradigmatic stereotype with which Jewish museums would have to struggle for decades to come.
Even though Salonican Jews are not typically associated with the Habsburg Empire, some of them, nonetheless, lived there. This paper aims to examine the formation of these Salonican Jews’ (self-)identification by studying their social interactions with the local Viennese population such as the Viennese Sephardi or the Greek-Orthodox communities. The change of the milieu within which they found themselves subsequently impacted their self-perception. Thus, the issue of the surrounding environment and their relations with other groups became central to their self-understanding, as will be demonstrated. By examining different aspects, like migration patterns, financial decisions and family ties, one can understand how their intersection influenced Salonica Jews’ self-identification, which, at the same time, shaped and was shaped by the surrounding milieu. Within this framework, these people perceived themselves and were perceived as Salonican, Sephardi, Jewish, and as subjects of the Emperor.
“Domestic Foreigners”
(2024)
This paper examines the relationship between the Sephardic Jewish community of Vienna and the Ottoman and Habsburg Empires in the latter half of the 19th century. The community’s legal status was transformed following the emancipation of Austrian Jews, but very few first-hand accounts of these changes exist today. The primary sources analyzed in this paper are Judezmo-language newspapers published in Vienna at that time. The paper emphasizes the historical and political contexts surrounding these sources, particularly the community’s close ties to the Ottoman and Habsburg regimes.
Shared Spaces
(2024)
Galicia was home to the largest Jewish population of the Cisleithanian part of the Habsburg Empire. After the Josephinian “German-Jewish schools” had closed already in 1806, educational patterns differed from those in Moravia and Bohemia, where Jewish children received a secular education in a more consistent “Jewish” space. In Galicia in the constitutional era (post-1867), however, with mandatory education enforced, public schools became a shared space in which Jews and (Catholic) Christians functioned together. In Galicia, most Jewish children received public education but usually constituted a religious minority in the student body. The article analyzes how the school space, calendar, and routines were adjusted to accommodate the multi-religious character of the student body.
The article analyzes the interdependences between the history of the Habsburg Empire and the names of its Jewish inhabitants. Until today, these names tell stories about this close relationship and they are an everlasting symbol of this era. By focusing on names, this paper shows how state policies towards Jews shifted over time, and how the perspective on names and name regulations can be a tool to connect and investigate both Habsburg and Jewish studies.
This article aims to demonstrate the exceptional potential of Habsburg military records for the study of Jewish history during Europe’s Age of Revolution. We begin with the random discovery of six Jewish veterans of Freikorps Grün Loudon – a unit of mercenary freebooters – which fought for the Habsburgs during the first war against the French Republic (1792 – 97). A careful re-reading of the available archival evidence reveals that these men were the survivors of a much larger group numbering at least two dozen Jewish soldiers. While Jewish conscripts had been drafted into the Habsburg army since 1788, the fact that Jews could also serve – even volunteer – as professional soldiers in that period is completely new to us. When considered together, the personal circumstances and service experiences of the Jewish soldiers of Freikorps Grün Loudon enable us to make several observations about their motivation as well as their position vis-à-vis their non-Jewish comrades.