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There is a tremendous demand for highly Na+-selective fluoroionophores to monitor the top analyte Na+ in life science. Here, we report a systematic route to develop highly Na+/K+ selective fluorescent probes. Thus, we synthesized a set of fluoroionophores 1, 3, 4, 5, 8 and 9 (see Scheme 1) to investigate the Na+/K+ selectivity and Na(+-)complex stability in CH3CN and H2O. These Na+-probes bear different 15-crown-5 moieties to bind Na+ stronger than K+. In the set of the diethylaminocoumarin-substituted fluoroionophores 1-5, the following trend of fluorescence quenching 1 > 3 > 2 > 4 > 5 in CH3CN was observed. Therefore, the flexibility of the aza-15-crown-5 moieties in 1-4 determines the conjugation of the nitrogen lone pair with the aromatic ring. As a consequence, 1 showed in CH3CN the highest Na+-induced fluorescence enhancement (FE) by a factor of 46.5 and a weaker K+ induced FE of 3.7. The Na+-complex stability of 1-4 in CH3CN is enhanced in the following order of 2 > 4 > 3 > 1, assuming that the O-atom of the methoxy group in the ortho-position, as shown in 2, strengthened the Na+-complex formation. Furthermore, we found for the N( o-methoxyphenyl) aza-15-crown-5 substituted fluoroionophores 2, 8 and 9 in H2O, an enhanced Na+-complex stability in the following order 8 > 2 > 9 and an increased Na+/K+ selectivity in the reverse order 9 > 2 > 8. Notably, the Na+-induced FE of 8 (FEF = 10.9), 2 (FEF = 5.0) and 9 (FEF = 2.0) showed a similar trend associated with a decreased K+-induced FE [8 (FEF = 2.7) > 2 (FEF = 1.5) > 9 (FEF = 1.1)]. Here, the Na+-complex stability and Na+/K+ selectivity is also influenced by the fluorophore moiety. Thus, fluorescent probe 8 (K-d = 48 mm) allows high-contrast, sensitive, and selective Na+ measurements over extracellular K+ levels. A higher Na+/K+ selectivity showed fluorescent probe 9, but also a higher Kd value of 223 mm. Therefore, 9 is a suitable tool to measure Na+ concentrations up to 300 mm at a fluorescence emission of 614 nm.
The new K+-selective fluorescent probes 1 and 2 were obtained by Cu-I-catalyzed 1,3-dipolar azide alkyne cycloaddition (CuAAC) reactions of an alkyne-substituted [1,3]dioxolo[4,5-f][1,3]benzodioxole (DBD) ester fluorophore with azido-functionalized N-phenylaza-18-crown-6 ether and N-(o-isopropoxy) phenylaza-18-crown-6 ether, respectively. Probes 1 and 2 allow the detection of K+ in the presence of Na+ in water by fluorescence enhancement (2.2 for 1 at 2000mm K+ and 2.5 for 2 at 160mm K+). Fluorescence lifetime measurements in the absence and presence of K+ revealed bi-exponential decay kinetics with similar lifetimes, however with different proportions changing the averaged fluorescence decay times ((f(av))). For 1 a decrease of (f(av)) from 12.4 to 9.3ns and for 2 an increase from 17.8 to 21.8ns was observed. Variation of the substituent in ortho position of the aniline unit of the N-phenylaza-18-crown-6 host permits the modulation of the K-d value for a certain K+ concentration. For example, substitution of H in 1 by the isopropoxy group (2) decreased the K-d value from >300mm to 10mm. 2 was chosen for studying the efflux of K+ from human red blood cells (RBC). Upon addition of the Ca2+ ionophor ionomycin to a RBC suspension in a buffer containing Ca2+, the fluorescence of 2 slightly rose within 10min, however, after 120min a significant increase was observed.
Microwave heating (MW)-assisted synthesis has been widely applied as an alternative method for the chemical synthesis of organic and inorganic materials. In this work, we report MW-assisted synthesis of three isostructural 3D frameworks with a flexible linker arm of the chelating linker 2-substituted imidazolate- 4-amide-5-imidate, named IFP-7-MW (M = Zn, R = OMe), IFP-8-MW (M = Co; R = OMe) and IFP-10-MW (M = Co; R = OEt) (IFP = Imidazolate Framework Potsdam). These chelating ligands were generated in situ by partial hydrolysis of 2-substituted 4,5-dicyanoimidazoles under MW-and also conventional electrical heating (CE)-assisted conditions in DMF. The structure of these materials was determined by IR spectroscopy and powder X-ray diffraction (PXRD) and the identity of the materials synthesized under CE-conditions was established. Materials obtained from MW-heating show many fold enhancement of CO2 and H-2 uptake capacities, compared to the analogous CE-heating method based materials. To understand the inner pore-sizes of IFP structures and variations of gas sorptions, we performed positron annihilation lifetime spectroscopy (PALS), which shows that MW-assisted materials have smaller pore sizes than materials synthesized under CE-conditions. The "kinetically controlled" MW-synthesized material has an inherent ability to trap extra linkers, thereby reducing the pore sizes of CE-materials to ultra/micropores. These ultramicropores are responsible for high gas sorption.
Two-Level Shape Changes of Polymeric Microcuboids Prepared from Crystallizable Copolymer Networks
(2017)
Polymeric microdevices bearing features like nonspherical shapes or spatially segregated surface properties are of increasing importance in biological and medical analysis, drug delivery, and bioimaging or microfluidic systems as well as in micromechanics, sensors, information storage, or data carrier devices. Here, a method to fabricate programmable microcuboids with shape-memory capability and the quantification of their recovery at different levels is reported. The method uses the soft lithographic technique to create microcuboids with well-defined sizes and surface properties. Microcuboids having an edge length of 25 mu m and a height of 10 mu m were prepared from cross-linked poly[ethylene-co-(vinyl acetate)] (cPEVA) with different vinyl acetate contents and were programmed by compression with various deformation degrees at elevated temperatures. The microlevel shape-recovery of the cuboidal geometry during heating was monitored by optical microscopy (OM) and atomic force microscopy (AFM) studying the related changes in the projected area (PA) or height, while the nanolevel changes of the nanosurface roughness were investigated by in situ AFM. The shape-memory effect at the microlevel was quantified by the recovery ratio of cuboids (R-r,R-micro), while at the. nanolevel, the recovery ratio of the nanoroughness (R-r,R-nano) was measured. The values of R-r,R-micro,,micro could be tailored in a range from 42 +/- 1% to 102 +/- 1% and Rr,nano from 89 +/- 6% to 136 +/- 21% depending on the applied compression ratio and the amount of vinyl acetate content in the cPEVA microcuboids.
Im Rahmen dieser Arbeit wurden zum einen erste Oligospiro(thio)ketal (OS(T)K)-basierte Modellsysteme (molekulare Sonden) für abstandsabhängige Messungen mittels Förster-Resonanz-Energietransfer (FRET) und zum anderen Sensorfluorophore, basierend auf einem DBD-Fluorophor und BAPTA, zur Messung der intrazellulären Calcium-Konzentration dargestellt.
Für die Synthese von molekularen Sonden für abstandsabhängige Messungen wurden verschiedenste einfach- und doppelt-markierte OS(T)K-Stäbe entwickelt und spektroskopisch untersucht. Die OS(T)K-Stäbe, sogenannte molekulare Stäbe, dienten als starre Abstandshalter zwischen den Fluorophoren. Als Fluorophore wurden Derivate von 6,7-Dihydroxy-4-methylcoumarin (Donor) und Acyl-DBD (Akzeptor) verwendet, die zusammen ein FRET-Paar bilden. Die Fluorophore wurden so funktionalisiert, dass sie sowohl unbeweglich bzw. „starr“, als auch beweglich bzw. „flexibel“ an den OS(T)K-Stab gebunden werden konnten. Für die Synthese der OS(T)K-Stäbe wurden ebenfalls eine Reihe an unterschiedlich langen und kurzen Stabbausteinen synthetisiert. Auf diese Weise wurden eine Vielzahl an verschiedensten einfach- und doppelt-markierten OS(T)K-Stäben dargestellt, deren Fluorophore sowohl „starr“ als auch „flexibel“ gebunden sind. Die dargestellten Stäbe wurden in verschiedensten Lösungsmitteln spektroskopisch untersucht, um anschließend das Verhalten in Vesikel, die eine biomimetische Umgebung darstellen, zu beurteilen. Es wurde festgestellt, dass sich die Stäbe erfolgreich in die Vesikelmembran einlagerten und hohe FRET-Effizienzen aufweisen.
Des Weiteren wurde ein FRET-Paar dargestellt, das sich durch 2-Photonenabsorpion im NIR-Bereich anregen lässt. Es wurde in den lebenden Zellen mittels Fluoreszenzlebenszeitmikroskopie (FLIM) untersucht.
Zur Untersuchung von intrazellulärem Calcium wurden zwei verschiedene DBD-Fluorophore über einen kurzen Linker mit dem Calcium-Chelator BAPTA verknüpft. Die dargestellten Fluorophore wurden sowohl in vitro als auch in vivo auf ihre Calcium-Sensitivität überprüft. Mittels FLIM wurden in lebenden Zellen die Fluoreszenzlebenszeitverteilungen der Fluorophore nach Calcium-Konzentrationsänderungen detektiert.
Noninvasive imaging in the root soil compartment is mandatory for improving knowledge about root soil interactions and uptake processes which eventually control crop growth and productivity. Here we propose a method of MRI T-1 relaxation mapping to investigate water uptake patterns, and as second example, in combination with neutron tomography (NT), property changes in the rhizosphere. The first part demonstrates quantification of solute enrichment by advective transport to the roots due to water uptake. This accumulation is counterbalanced by net downward flow and dispersive spreading. One can furthermore discriminate between zones of high accumulation patterns and zones with much less enrichment. This behavior persists over days. The second part presents the novel combination of MRI with neutron tomography to couple static, proton density information of roots and their interface to the surrounding soil with information about the local water dynamics, reflected by NMR relaxation times. The root soil interface of a broad bean plant is characterized by slightly increasing MRI and NT signal intensity but decreasing T-1 relaxation time indicating locally changed soil properties.
The field of nanophotonics focuses on the interaction between electromagnetic radiation and matter on the nanometer scale. The elements of nanoscale photonic devices can transfer excitation energy non-radiatively from an excited donor molecule to an acceptor molecule by Förster resonance energy transfer (FRET). The efficiency of this energy transfer is highly dependent on the donor-acceptor distance. Hence, in these nanoscale photonic devices it is of high importance to have a good control over the spatial assembly of used fluorophores. Based on molecular self-assembly processes, various nanostructures can be produced. Here, DNA nanotechnology and especially the DNA origami technique are auspicious self-assembling methods. By using DNA origami nanostructures different fluorophores can be introduced with a high local control to create a variety of nanoscale photonic objects. The applications of such nanostructures range from photonic wires and logic gates for molecular computing to artificial light harvesting systems for artificial photosynthesis.
In the present cumulative doctoral thesis, different FRET systems on DNA origami structures have been designed and thoroughly analyzed. Firstly, the formation of guanine (G) quadruplex structures from G rich DNA sequences has been studied based on a two-color FRET system (Fluorescein (FAM)/Cyanine3 (Cy3)). Here, the influences of different cations (Na+ and K+), of the DNA origami structure and of the DNA sequence on the G-quadruplex formation have been analyzed. In this study, an ion-selective K+ sensing scheme based on the G-quadruplex formation on DNA origami structures has been developed. Subsequently, the reversibility of the G-quadruplex formation on DNA origami structures has been evaluated. This has been done for the simple two-color FRET system which has then been advanced to a switchable photonic wire by introducing additional fluorophores (FAM/Cy3/Cyanine5 (Cy5)/IRDye®700). In the last part, the emission intensity of the acceptor molecule (Cy5) in a three-color FRET cascade has been tuned by arranging multiple donor (FAM) and transmitter (Cy3) molecules around the central acceptor molecule. In such artificial light harvesting systems, the excitation energy is absorbed by several donor and transmitter molecules followed by an energy transfer to the acceptor leading to a brighter Cy5 emission. Furthermore, the range of possible excitation wavelengths is extended by using several different fluorophores (FAM/Cy3/Cy5). In this part of the thesis, the light harvesting efficiency (antenna effect) and the FRET efficiency of different donor/transmitter/acceptor assemblies have been analyzed and the artificial light harvesting complex has been optimized in this respect.
Complete sticking at low incidence energies and broad angular scattering distributions at higher energies are often observed in molecular beam experiments on gas-surface systems which feature a deep chemisorption well and lack early reaction barriers. Although CO binds strongly on Ru(0001), scattering is characterized by rather narrow angular distributions and sticking is incomplete even at low incidence energies. We perform molecular dynamics simulations, accounting for phononic (and electronic) energy loss channels, on a potential energy surface based on first-principles electronic structure calculations that reproduce the molecular beam experiments. We demonstrate that the mentioned unusual behavior is a consequence of a very strong rotational anisotropy in the molecule-surface interaction potential. Beyond the interpretation of scattering phenomena, we also discuss implications of our results for the recently proposed role of a precursor state for the desorption and scattering of CO from ruthenium.
We present a rigorous method to set up a system-bath Hamiltonian for the coupling of adsorbate vibrations (the system) to surface phonons (the bath). The Hamiltonian is straightforward to derive and exact up to second order in the environment coordinates, thus capable of treating one- and two-phonon contributions to vibration-phonon coupling. The construction of the Hamiltonian uses orthogonal coordinates for system and bath modes, is based on an embedded cluster approach, and generalizes previous Hamiltonians of a similar type, but avoids several (additional) approximations. While the parametrization of the full Hamiltonian is in principle feasible by a first principles quantum mechanical treatment, here we adopt in the spirit of a QM/MM model a combination of density functional theory (“QM”, for the system) and a semiempirical forcefield (“MM”, for the bath). We apply the Hamiltonian to a fully H-covered Si(100)-(2 × 1) surface, using Fermi’s Golden Rule to obtain vibrational relaxation rates of various H–Si bending modes of this system. As in earlier work it is found that the relaxation is dominated by two-phonon contributions because of an energy gap between the Si–H bending modes and the Si phonon bands. We obtain vibrational lifetimes (of the first excited state) on the order of 2 ps at K. The lifetimes depend only little on the type of bending mode (symmetric vs. antisymmetric, parallel vs. perpendicular to the Si2H2 dimers). They decrease by a factor of about two when heating the surface to 300 K. We also study isotope effects by replacing adsorbed H atoms by deuterium, D. The Si–D bending modes are shifted into the Si phonon band of the solid, opening up one-phonon decay channels and reducing the lifetimes to few hundred fs.
Serological diagnosis and prognosis of severe acute pancreatitis by analysis of serum glycoprotein 2
(2017)
To better understand emerging adults’ perceptions of family interactions and value transmission to the next generation, we examined Hmong American emerging adults’ reflections on their parents’ parenting. Participants discussed what parenting practices they would do differently and others they hoped to emulate with their future adolescent children. Thirty Hmong American emerging adults (18-25 years; M = 21.2 years; 50% female) participated in interviews that focused retrospectively on the parent–adolescent relationship. Results revealed that emerging adults wanted to parent differently in three ways: less pressure about education, fewer restrictions, and more open communication. Emerging adults imagined being a similar
parent in four ways: promoting education, promoting life values, giving
guidance, and offering love and support. The findings highlight parenting practices that Hmong American emerging adults plan on transmitting (and not transmitting) to their own children, offering a glimpse into the type of parents the emerging adults may become.
Reversible movements of current polymeric actuators stem from the continuous response to signals from a controlling unit, and subsequently cannot be interrupted without stopping or eliminating the input trigger. Here, we present actuators based on cross-linked blends of two crystallizable polymers capable of pausing their movements in a defined manner upon continuous cyclic heating and cooling. This noncontinuous actuation can be adjusted by varying the applied heating and cooling rates. The feasibility of these devices for technological applications was shown in a 140 cycle experiment of free-standing noncontinuous shape shifts, as well as by various demonstrators.
Die klassische Physik/Chemie unterscheidet zwischen drei Bindungstypen: Der kovalenten Bindung, der ionischen Bindung und der metallischen Bindung. Moleküle untereinander werden hingegen durch schwache Wechselwirkungen zusammen gehalten, sie sind trotz ihrer schwachen Kräfte weniger verstanden, aber dabei nicht weniger wichtig. In zukunftsweisenden Gebieten wie der Nanotechnologie, der Supramolekularen Chemie und Biochemie sind sie von elementarer Bedeutung.
Um schwache, intermolekulare Wechselwirkungen zu beschreiben, vorauszusagen und zu verstehen, sind sie zunächst theoretisch zu erfassen. Hierzu gehören verschiedene quantenchemische Methoden, die in dieser Arbeit vorgestellt, verglichen, weiterentwickelt und schließlich auch exemplarisch auf Problemstellungen in der Chemie angewendet werden. Aufbauend auf einer Hierarchie von Methoden unterschiedlicher Genauigkeit werden sie für diese Ziele eingesetzt, ausgearbeitet und kombiniert.
Berechnet wird die Elektronenstruktur, also die Verteilung und Energie von Elektronen, die im Wesentlichen die Atome zusammen halten. Da Ungenauigkeiten von der Beschreibung der Elektronenstruktur von den verwendeten Methoden abhängen, kann man die Effekte detailliert untersuchen, sie beschreiben und darauf aufbauend weiter entwickeln, um sie anschließend an verschiedenen Modellen zu testen. Die Geschwindigkeit der Berechnungen mit modernen Computern ist eine wesentliche, zu berücksichtigende Komponente, da im Allgemeinen die Genauigkeit mit der Rechenzeit exponentiell steigt, und die damit an die Grenzen der Möglichkeiten stoßen muss.
Die genaueste der verwendeten Methoden basiert auf der Coupled-Cluster-Theorie, die sehr gute Voraussagen ermöglicht. Für diese wird eine sogenannte spektroskopische Genauigkeit mit Abweichungen von wenigen Wellenzahlen erzielt, was Vergleiche mit experimentellen Daten zeigen. Eine Möglichkeit zur Näherung von hochgenauen Methoden basiert auf der Dichtefunktionaltheorie: Hier wurde das „Boese-Martin for Kinetics“ (BMK)-Funktional entwickelt, dessen Funktionalform sich in vielen nach 2010 veröffentlichten Dichtefunktionalen wiederfindet.
Mit Hilfe der genaueren Methoden lassen sich schließlich semiempirische Kraftfelder zur Beschreibung intermolekularer Wechselwirkungen für individuelle Systeme parametrisieren, diese benötigen weit weniger Rechenzeit als die Methoden, die auf der genauen Berechnung der Elektronenstruktur von Molekülen beruhen.
Für größere Systeme lassen sich auch verschiedene Methoden kombinieren. Dabei wurden Einbettungsverfahren verfeinert und mit neuen methodischen Ansätzen vorgeschlagen. Sie verwenden sowohl die symmetrieadaptierte Störungstheorie als auch die quantenchemische Einbettung von Fragmenten in größere, quantenchemisch berechnete Systeme.
Die Entwicklungen neuer Methoden beziehen ihren Wert im Wesentlichen durch deren Anwendung:
In dieser Arbeit standen zunächst die Wasserstoffbrücken im Vordergrund. Sie zählen zu den stärkeren intermolekularen Wechselwirkungen und sind nach wie vor eine Herausforderung. Im Gegensatz dazu sind van-der-Waals Wechselwirkungen relativ einfach durch Kraftfelder zu beschreiben. Deshalb sind viele der heute verwendeten Methoden für Systeme, in denen Wasserstoffbrücken dominieren, vergleichsweise schlecht.
Eine Untersuchung molekularer Aggregate mit Auswirkungen intermolekularer Wechselwirkungen auf die Schwingungsfrequenzen von Molekülen schließt sich an. Dabei wird auch über die sogenannte starrer-Rotor-harmonischer-Oszillator-Näherung hinausgegangen.
Eine weitreichende Anwendung behandelt Adsorbate, hier die von Molekülen auf ionischen/metallischen Oberflächen. Sie können mit ähnlichen Methoden behandelt werden wie die intermolekularen Wechselwirkungen, und sind mit speziellen Einbettungsverfahren sehr genau zu beschreiben. Die Resultate dieser theoretischen Berechnungen stimulierten eine Neubewertung der bislang bekannten experimentellen Ergebnisse.
Molekulare Kristalle sind ein äußerst wichtiges Forschungsgebiet. Sie werden durch schwache Wechselwirkungen zusammengehalten, die von van-der-Waals Kräften bis zu Wasserstoffbrücken reichen. Auch hier wurden neuentwickelte Methoden eingesetzt, die eine interessante, mindestens ebenso genaue Alternative zu den derzeit gängigen Methoden darstellen.
Von daher sind die entwickelten Methoden, als auch deren Anwendung äußerst vielfältig. Die behandelten Berechnungen der Elektronenstruktur erstrecken sich von den sogenannten post-Hartree-Fock-Methoden über den Einsatz der Dichtefunktionaltheorie bis zu semiempirischen Kraftfeldern und deren Kombinationen. Die Anwendung reicht von einzelnen Molekülen in der Gasphase über die Adsorption auf Oberflächen bis zum molekularen Festkörper.
This project was focused on generating ultra thin stimuli responsive membranes with an embedded transmembrane protein to act as the pore. The membranes were formed by crosslinking of transmembrane protein polymer conjugates. The conjugates were self assembled on air water interface and the polymer chains crosslinked using a UV crosslinkable comonomer to engender the membrane. The protein used for the studies reported herein was one of the largest transmembrane channel proteins, ferric hydroxamate uptake protein component A (FhuA), found in the outer membrane of Escherichia coli (E. coli). The wild type protein and three genetic variants of FhuA were provided by the group of Prof. Schwaneberg in Aachen. The well known thermo responsive poly(N isopropylacrylamide) (PNIPAAm) and the pH and thermo responsive polymer poly((2-dimethylamino)ethyl methacrylate) (PDMAEMA) were conjugated to FhuA and the genetic variants via controlled radical polymerization (CRP) using grafting from technique. These polymers were chosen because they would provide stimuli handles in the resulting membranes. The reported polymerization was the first ever attempt to attach polymer chains onto a membrane protein using site specific modification.
The conjugate synthesis was carried out in two steps – a) FhuA was first converted into a macroinitiator by covalently linking a water soluble functional CRP initiator to the lysine residues. b) Copper mediated CRP was then carried out in pure buffer conditions with and without sacrificial initiator to generate the conjugates.
The challenge was carrying out the modifications on FhuA without denaturing it. FhuA, being a transmembrane protein, requires amphiphilic species to stabilize its highly hydrophobic transmembrane region. For the experiments reported in this thesis, the stabilizing agent was 2 methyl 2,4-pentanediol (MPD). Since the buffer containing MPD cannot be considered a purely aqueous system, and also because MPD might interfere with the polymerization procedure, the reaction conditions were first optimized using a model globular protein, bovine serum albumin (BSA). The optimum conditions were then used for the generation of conjugates with FhuA.
The generated conjugates were shown to be highly interfacially active and this property was exploited to let them self assemble onto polar apolar interfaces. The emulsions stabilized by particles or conjugates are referred to as Pickering emulsions. Crosslinking conjugates with a UV crosslinkable co monomer afforded nano thin micro compartments. Interfacial self assembly at the air water interface and subsequent UV crosslinking also yielded nano thin, stimuli responsive membranes which were shown to be mechanically robust. Initial characterization of the flux and permeation of water through these membranes is also reported herein. The generated nano thin membranes with PNIPAAm showed reduced permeation at elevated temperatures owing to the resistance by the hydrophobic and thus water-impermeable polymer matrix, hence confirming the stimulus responsivity.
Additionally, as a part of collaborative work with Dr. Changzhu Wu, TU Dresden, conjugates of three enzymes with current/potential industrial relevance (candida antarctica lipase B, benzaldehyde lyase and glucose oxidase) with stimuli responsive polymers were synthesized. This work aims at carrying out cascade reactions in the Pickering emulsions generated by self assembled enzyme polymer conjugate.
I. Ceric ammonium nitrate (CAN) mediated thiocyanate radical additions to glycals
In this dissertation, a facile entry was developed for the synthesis of 2-thiocarbohydrates and their transformations. Initially, CAN mediated thiocyanation of carbohydrates was carried out to obtain the basic building blocks (2-thiocyanates) for the entire studies. Subsequently, 2-thiocyanates were reduced to the corresponding thiols using appropriate reagents and reaction conditions. The screening of substrates, stereochemical outcome and the reaction mechanism are discussed briefly (Scheme I).
Scheme I. Synthesis of the 2-thiocyanates II and reductions to 2-thiols III & IV.
An interesting mechanism was proposed for the reduction of 2-thiocyanates II to 2-thiols III via formation of a disulfide intermediate. The water soluble free thiols IV were obtained by cleaving the thiocyanate and benzyl groups in a single step. In the subsequent part of studies, the synthetic potential of the 2-thiols was successfully expanded by simple synthetic transformations.
II. Transformations of the 2-thiocarbohydrates
The 2-thiols were utilized for convenient transformations including sulfa-Michael additions, nucleophilic substitutions, oxidation to disulfides and functionalization at the anomeric position. The diverse functionalizations of the carbohydrates at the C-2 position by means of the sulfur linkage are the highlighting feature of these studies. Thus, it creates an opportunity to expand the utility of 2-thiocarbohydrates for biological studies.
Reagents and conditions: a) I2, pyridine, THF, rt, 15 min; b) K2CO3, MeCN, rt, 1 h; c) MeI, K2CO3, DMF, 0 °C, 5 min; d) Ac2O, H2SO4 (1 drop), rt, 10 min; e) CAN, MeCN/H2O, NH4SCN, rt, 1 h; f) NaN3, ZnBr2, iPrOH/H2O, reflux, 15 h; g) NaOH (1 M), TBAI, benzene, rt, 2 h; h) ZnCl2, CHCl3, reflux, 3 h.
Scheme II. Functionalization of 2-thiocarbohydrates.
These transformations have enhanced the synthetic value of 2-thiocarbohydrates for the preparative scale. Worth to mention is the Lewis acid catalyzed replacement of the methoxy group by other nucleophiles and the synthesis of the (2→1) thiodisaccharides, which were obtained with complete β-selectivity. Additionally, for the first time, the carbohydrate linked thiotetrazole was synthesized by a (3 + 2) cycloaddition approach at the C-2 position.
III. Synthesis of thiodisaccharides by thiol-ene coupling.
In the final part of studies, the synthesis of thiodisaccharides by a classical photoinduced thiol-ene coupling was successfully achieved.
Reagents and conditions: 2,2-Dimethoxy-2-phenylacetophenone (DPAP), CH2Cl2/EtOH, hv, rt.
Scheme III. Thiol-ene coupling between 2-thiols and exo-glycals.
During the course of investigations, it was found that the steric hindrance plays an important role in the addition of bulky thiols to endo-glycals. Thus, we successfully screened the suitable substrates for addition of various thiols to sterically less hindered alkenes (Scheme III). The photochemical addition of 2-thiols to three different exo-glycals delivered excellent regio- and diastereoselectivities as well as yields, which underlines the synthetic potential of this convenient methodology.
In dieser Arbeit werden drei Themen im Zusammenhang mit den spektroskopischen Eigenschaften von Cumarin- (Cou) und DBD-Farbstoffen ([1,3]Dioxolo[4,5-f][1,3]benzodioxol) behandelt. Der erste Teil zeigt die grundlegende spektroskopische Charakterisierung von 7-Aminocumarinen und ihre potentielle Anwendung als Fluoreszenzsonde für Fluoreszenzimmunassays. Im zweiten Teil werden mit die photophysikalischen Eigenschaften der Cumarine genutzt um Cou- und DBD-funktionalisierte Oligo-Spiro-Ketal-Stäbe (OSTK) und ihre Eigenschaften als Membransonden zu untersuchen. Der letzte Teil beschäftigt sich mit der Synthese und der Charakterisierung von Cou- und DBD-funktionalisierten Polyprolinen als Referenzsysteme für schwefelfunktionalisierte OSTK-Stäbe und ihrer Kopplung an Goldnanopartikel.
Immunochemische Analysemethoden sind in der klinischen Diagnostik sehr erfolgreich und werden heute auch für die Nahrungsmittelkontrolle und Überwachung von Umweltfragen mit einbezogen. Dadurch sind sie von großem Interesse für weitere Forschungen. Unter den verschiedenen Immunassays zeichnen sich lumineszenzbasierte Formate durch ihre herausragende Sensitivität aus, die dieses Format für zukünftige Anwendungen besonders attraktiv macht. Die Notwendigkeit von Multiparameterdetektionsmöglichkeiten erfordert einen Werkzeugkasten mit Farbstoffen, um die biochemische Reaktion in ein optisch detektierbares Signal umzuwandeln. Hier wird bei einem Multiparameteransatz jeder Analyt durch einen anderen Farbstoff mit einer einzigartigen Emissionsfarbe, die den blauen bis roten Spektralbereich abdecken, oder eine einzigartige Abklingzeit detektiert. Im Falle eines kompetitiven Immunassayformats wäre für jeden der verschiedenen Farbstoffe ein einzelner Antikörper erforderlich. In der vorliegenden Arbeit wird ein leicht modifizierter Ansatz unter Verwendung einer Cumarineinheit, gegen die hochspezifische monoklonale Antikörper (mAb) erzeugt wurden, als grundlegendes Antigen präsentiert. Durch eine Modifikation der Stammcumarineinheit an einer Position des Moleküls, die für die Erkennung durch den Antikörper nicht relevant ist, kann auf den vollen Spektralbereich von blau bis tiefrot zugegriffen werden. In dieser Arbeit wird die photophysikalische Charakterisierung der verschiedenen Cumarinderivate und ihrer entsprechenden Immunkomplexe mit zwei verschiedenen, aber dennoch hochspezifischen, Antikörpern präsentiert. Die Cumarinfarbstoffe und ihre Immunkomplexe wurden durch stationäre und zeitaufgelöste Absorptions- sowie Fluoreszenzemissionsspektroskopie charakterisiert. Darüber hinaus wurden Fluoreszenzdepolarisationsmessungen durchgeführt, um die Daten zu vervollständigen, die die verschiedenen Bindungsmodi der beiden Antikörper betonten. Im Gegensatz zu häufig eingesetzten Nachweissystemen wurde eine massive Fluoreszenzverstärkung bei der Bildung des Antikörper-Farbstoffkomplexes bis zu einem Faktor von 50 gefunden. Wegen der leichten Emissionsfarbenänderung durch das Anpassen der Cumarinsubstitution in der für die Antigenbindung nicht relevanten Position des Elternmoleküls, ist eine Farbstoff-Toolbox vorhanden, die bei der Konstruktion von kompetitiven Multiparameterfluoreszenzverstärkungsimmunassays verwendet werden kann.
Oligo-Spiro-Thio-Ketal-Stäbe werden aufgrund ihres hydrophoben Rückgrats leicht in Doppellipidschichten eingebaut und deshalb als optische Membransonde verwendet. Wegen ihres geringen Durchmessers wird nur eine minimale Störung der Doppellipidschicht verursacht. Durch die Markierung mit Fluoreszenzfarbstoffen sind neuartige Förster-Resonanz-Energietransfersonden mit hoch definierten relativen Orientierungen der Übergangsdipolmomente der Donor- und Akzeptorfarbstoffe zugänglich und macht die Klasse der OSTK-Sonden zu einem leistungsstarken, flexiblen Werkzeugkasten für optische Biosensoranwendungen. Mit Hilfe von stationären und zeitaufgelösten Fluoreszenzexperimenten wurde der Einbau von Cumarin- und DBD markierten OSTK-Stäben in großen unilamellaren Vesikeln untersucht und die Ergebnisse durch Fluoreszenzdepolarisationsmessungen untermauert.
Der letzte Teil dieser Arbeit beschäftigt sich mit der Synthese und Charakterisierung von Cou- und DBD-funktionalisierten Polyprolinen und ihrer Kopplung an Goldnanopartikel. Die farbstoffmarkierten Polyproline konnten erfolgreich hergestellt werden. Es zeigten sich deutlich Einflüsse auf die spektroskopischen Eigenschaften der Farbstoffe durch die Bindung an die Polyprolinhelix. Die Kopplung an die 5 nm großen AuNP konnte erfolgreich durchgeführt werden. Die Erfahrungen, die durch die Kopplung der Polyproline an die AuNP, gewonnen wurde, ist die Basis für eine Einzelmolekül-AFM-FRET-Nanoskopie mit OSTK-Stäben.
Despite the myriad of organic donor:acceptor materials, only few systems have emerged in the life of organic solar cells to, exhibit considerable reduced bimolecular recombination, with respect to the random encounter rate given by the Langevin equation. Monte Carlo simulations have revealed that the rate constant of the formation of electron-hole bound states depends on the random encounter of opposite charges and is nearly given by the Langevin equation for the domain sizes relevant to efficient bulk heterojunction systems. Recently, three studies :suggested that charge transfer states dissociating much faster than their decay rate to the ground state, can result in reduced bimolecular recombination by lowering the recombination rate to the ground state as a loss pathway. A separate study identified another loss pathway and suggested that forbidden back electron transfer from triplet charge transfer states to triplet excitons is a key to achieving reduced recombination. Herein we further explain the reduced bimolecular recombination by investigating the limitations of these two proposals. By solving kinetic rate equations for a BHJ system with realistic rates, we show that both of these previously presented conditions must only be held at the same time fora system to exhibit non-Langevin behavior. We demonstrate that suppression of both of the parallel loss channels of singlet and triplet states can be achieved through increasing the dissociation rate of the charge transfer states; a crucial requirement to achieve a high charge carrier extraction efficiency.
2-Deoxy-D-ribose-5-phosphate aldolase (DERA) is a biocatalyst that is capable of converting acetaldehyde and a second aldehyde as acceptor into enantiomerically pure mono- and diyhydroxyaldehydes, which are important structural motifs in a number of pharmaceutically active compounds. However, substrate as well as product inhibition requires a more-sophisticated process design for the synthesis of these motifs. One way to do so is to the couple aldehyde conversion with transport processes, which, in turn, would require an immobilization of the enzyme within a thin film that can be deposited on a membrane support. Consequently, we developed a fabrication process for such films that is based on the formation of DERA-poly(N-isopropylacrylamide) conjugates that are subsequently allowed to self-assemble at an air-water interface to yield the respective film. In this contribution, we discuss the conjugation conditions, investigate the interfacial properties of the conjugates, and, finally, demonstrate a successful film formation under the preservation of enzymatic activity.
It is known that aqueous keratin hydrolysate solutions can be produced from feathers using superheated water as solvent. This method is optimized in this study by varying the time and temperature of the heat treatment in order to obtain a high solute content in the solution. With the dissolved polypeptides, films are produced using methyl cellulose as supporting material. Thereby, novel composite membranes are produced from bio-waste. It is expected that these materials exhibit both protein and polysaccharide properties. The influence of the embedded keratin hydrolysates on the methyl cellulose structure is investigated using Fourier transform infrared spectroscopy (FTIR) and wide angle X-ray diffraction (WAXD). Adsorption peaks of both components are present in the spectra of the membranes, while the X-ray analysis shows that the polypeptides are incorporated into the semi-crystalline methyl cellulose structure. This behavior significantly influences the mechanical properties of the composite films as is shown by tensile tests. Since further processing steps, e.g., crosslinking, may involve a heat treatment, thermogravimetric analysis (TGA) is applied to obtain information on the thermal stability of the composite materials.
Surface acoustic wave (SAW) devices are well-known for gravimetric sensor applications. In biosensing applications, chemical-and biochemically evoked adsorption processes at surfaces are detected in liquid environments using delay-line or resonator sensor configurations, preferably in combination with appropriate microfluidic devices. In this paper, a novel SAW-based impedance sensor type is introduced which uses only one interdigital electrode transducer (IDT) simultaneously as SAW generator and sensor element. It is shown that the amplitude of the reflected S-11 signal directly depends on the input impedance of the SAW device. The input impedance is strongly influenced by mass adsorption which causes a characteristic and measurable impedance mismatch.
Polydepsipeptide Block-Stabilized Polyplexes for Efficient Transfection of Primary Human Cells
(2017)
The rational design of a polyplex gene carrier aims to balance maximal effectiveness of nucleic acid transfection into cells with minimal adverse effects. Depsipeptide blocks with an M (n) similar to 5 kDa exhibiting strong physical interactions were conjugated with PEI moieties (2.5 or 10 kDa) to di- and triblock copolymers. Upon nanoparticle formation and complexation with DNA, the resulting polyplexes (sizes typically 60-150 nm) showed remarkable stability compared to PEI-only or lipoplex and facilitated efficient gene delivery. Intracellular trafficking was visualized by observing fluorescence-labeled pDNA and highlighted the effective cytoplasmic uptake of polyplexes and release of DNA to the perinuclear space. Specifically, a triblock copolymer with a middle depsipeptide block and two 10 kDa PEI swallowtail structures mediated the highest levels of transgenic VEGF secretion in mesenchymal stem cells with low cytotoxicity. These nanocarriers form the basis for a delivery platform technology, especially for gene transfer to primary human cells.
The tissue integration of synthetic polymers can be promoted by displaying RGD peptides at the biointerface with the objective of enhancing colonization of the material by endogenous cells. A firm but flexible attachment of the peptide to the polymer matrix, still allowing interaction with receptors, is therefore of interest. Here, the covalent coupling of flexible physical anchor groups, allowing for temporary immobilization on polymeric surfaces via hydrophobic or dipole-dipole interactions, to a RGD peptide was investigated. For this purpose, a stearate or an oligo(ethylene glycol) (OEG) was attached to GRGDS in 51-69% yield. The obtained RGD linker constructs were characterized by NMR, IR and MALDI-ToF mass spectrometry, revealing that the commercially available OEG and stearate linkers are in fact mixtures of similar compounds. The RGD linker constructs were co-electrospun with poly(p-dioxanone) (PPDO). After electrospinning, nitrogen could be detected on the surface of the PPDO fibers by X-ray photoelectron spectroscopy. The nitrogen content exceeded the calculated value for the homogeneous material mixture suggesting a pronounced presentation of the peptide on the fiber surface. Increasing amounts of RGD linker constructs in the electrospinning solution did not lead to a detection of an increased amount of peptide on the scaffold surface, suggesting inhomogeneous distribution of the peptide on the PPDO fiber surface. Human adipose-derived stem cells cultured on the patches showed similar viability as when cultured on PPDO containing pristine RGD. The fully characterized RGD linker constructs could serve as valuable tools for the further development of tissue-integrating polymeric scaffolds. Copyright (c) 2016 John Wiley & Sons, Ltd.
Polymer degradation occurs under physiological conditions in vitro and in vivo, especially when bonds susceptible to hydrolysis are present in the polymer. Understanding of the degradation mechanism, changes of material properties over time, and overall rate of degradation is a necessary prerequisite for the knowledge-based design of polymers with applications in biomedicine. Here, hydrolytic degradation studies of gelatin-based networks synthesized by copper-catalyzed azide-alkyne cycloaddition reaction are reported, which were performed with or without addition of an enzyme. In all cases, networks with a stilbene as crosslinker proofed to be more resistant to degradation than when an octyl diazide was used. Without addition of an enzyme, the rate of degradation was ruled by the crosslinking density of the network and proceeded via a bulk degradation mechanism. Addition of Clostridium histolyticum collagenase resulted in a much enhanced rate of degradation, which furthermore occurred via surface erosion. The mesh size of the hydrogels (>7nm) was in all cases larger than the hydrodynamic radius of the enzyme (4.5nm) so that even in very hydrophilic networks with large mesh size enzymes may be used to induce a fast surface degradation mechanism. This observation is of general interest when designing hydrogels to be applied in the presence of enzymes, as the degradation mechanism and material performance are closely interlinked. Copyright (c) 2016 John Wiley & Sons, Ltd.
Surfactants are required for the formation and stabilization of hydrophobic polymeric particles in aqueous environment. In order to form submicron particles of varying sizes from oligo[3-(S)-sec-butylmorpholine-2,5-dione]diols ((OBMD)-diol), different surfactants were investigated. As new surfactants, four-armed star-shaped oligo(ethylene glycol)s of molecular weights of 5-20 kDa functionalized with desamino-tyrosine (sOEG-DAT) resulted in smaller particles with lower PDI than with desaminotyrosyl tyrosine (sOEG-DATT) in an emulsion/solvent evaporation method. In a second set of experiments, sOEG-DAT of M-n= 10 kDa was compared with the commonly employed emulsifiers polyvinylalcohol (PVA), polyoxyethylene (20) sorbitan monolaurate (Tween 20), and D-alpha-tocopherol polyethylene glycol succinate (VIT E-TPGS) for OBMD particle preparation. sOEG-DAT allowed to systematically change sizes in a range of 300 up to 900 nm with narrow polydispersity, while in the other cases, a lower size range (250-400 nm, PVA; 300 nm, Tween 20) or no effective particle formation was observed. The ability of tailoring particle size in a broad range makes sOEG-DAT of particular interest for the formation of oligodepsipeptide particles, which can further be investigated as drug carriers for controlled delivery. (C) 2016 Elsevier B.V. All rights reserved.
Spot variation fluorescence correlation spectroscopy (SV-FCS) is a variant of the FCS techniques which may give useful information about the structural organisation of the medium in which the diffusion takes place. We show that the same results can be obtained by post-processing the photon count data from ordinary FCS measurements. By using this method, one obtains the fluorescence autocorrelation functions for sizes of confocal volume, which are effectively smaller than that of the initial FCS measurement. The photon counts of the initial experiment are first transformed into smooth intensity trace using kernel smoothing method or to a piecewise-continuous intensity trace using binning and then a non-linear transformation is applied to this trace. The result of this transformation mimics the photon count rate in an experiment performed with a smaller confocal volume. The applicability of the method is established in extensive numerical simulations and directly supported in in-vitro experiments. The procedure is then applied to the diffusion of AlexaFluor647-labeled streptavidin in living cells.
Water deficit (drought stress) massively restricts plant growth and the yield of crops; reducing the deleterious effects of drought is therefore of high agricultural relevance. Drought triggers diverse cellular processes including the inhibition of photosynthesis, the accumulation of cell-damaging reactive oxygen species and gene expression reprogramming, besides others. Transcription factors (TF) are central regulators of transcriptional reprogramming and expression of many TF genes is affected by drought, including members of the NAC family. Here, we identify the NAC factor JUNGBRUNNEN1 (JUB1) as a regulator of drought tolerance in tomato (Solanum lycopersicum). Expression of tomato JUB1 (SlJUB1) is enhanced by various abiotic stresses, including drought. Inhibiting SlJUB1 by virus-induced gene silencing drastically lowers drought tolerance concomitant with an increase in ion leakage, an elevation of hydrogen peroxide (H2O2) levels and a decrease in the expression of various drought-responsive genes. In contrast, overexpression of AtJUB1 from Arabidopsis thaliana increases drought tolerance in tomato, alongside with a higher relative leaf water content during drought and reduced H2O2 levels. AtJUB1 was previously shown to stimulate expression of DREB2A, a TF involved in drought responses, and of the DELLA genes GAI and RGL1. We show here that SlJUB1 similarly controls the expression of the tomato orthologs SlDREB1, SlDREB2 and SlDELLA. Furthermore, AtJUB1 directly binds to the promoters of SlDREB1, SlDREB2 and SlDELLA in tomato. Our study highlights JUB1 as a transcriptional regulator of drought tolerance and suggests considerable conservation of the abiotic stress-related gene regulatory networks controlled by this NAC factor between Arabidopsis and tomato.
The separation of ethane/ethene mixtures (as well as other paraffin/olefin mixtures) is one of the most important but challenging processes in the petrochemical industry. In this work, we report the synthesis of ZIF-318, isostructural to ZIF-8 but built from the mixed linkers of 2-methylimidazole (L1) and 2-trifluoromethylimidazole (L2) (ZIF-318 = [(Zn(L1)(L2)](n)). The synthesis has been optimized to proceed without ZnO-formation. Using only the L2 linker under solvothermal conditions afforded ZnO-embedded in the H-bonded and non-porous coordination polymer ZnO@[Zn-2(L2)(2)(HCOO)(OH)](n). The slight differences in the size of the substituents (-CH3 vs. -CF3) possibly in combination with different electronic inductive effects led to small but significant changes to the pore size and properties respectively, though the effective pore opening (aperture) size of ZIF-318 remained the same in comparison with ZIF-8. ZIF-318 is chemically (boiling water, methanol, benzene, and wide pH range at room temperature for 1 day), thermally (up to 310 degrees C) stable, and more hydrophobic than ZIF-8 which is proven by contact angle measurement. ZIF-318 can be activated for N-2, CO2, CH4, H-2, ethane, ethane, propane, and propene gases sorptions. Consequently, in breakthrough experiments, the ethane/ethene mixtures can be separated.
Four metal organic frameworks with similar topology but different chemical environment inside the pore structure, namely, IFP-1, IFP-3, IFP-5, and IFP-7, have been investigated with respect to the separation potential for olefin paraffin mixtures as well as the influence of the different linkers on adsorption properties using experiments and Monte Carlo simulations. All IFP structures show a higher adsorption of ethane compared to ethene with the exception of IFP-7 which shows no selectivity in breakthrough experiments. For propane/propane separation, all adsorbents show a higher adsorption for the olefin. The experimental results agree quite well with the simulated values except for the IFP-7, which is presumably due to the flexibility of the structure. Moreover, the experimental and simulated isotherms were confirmed with breakthrough experiments that render IFP-1, IFP-3, and IFP-5 as suitable for the purification of ethene from ethane.
Calcium carbonate formation
(2017)
4-Methyl-1-vinyl-1,2,4-triazolium triiodide ionic liquid and its polymer poly(4-methyl-1-vinyl-1,2,4-triazolium) triiodide were prepared for the first time from their iodide precursors via the reaction of iodide (I-) with elemental iodine (I-2). The change from iodide to triiodide (I-3(-)) was found to introduce particular variations in the physical properties of these two compounds, including lower melting point/glass transition temperature and altered solubility. The compounds were characterized by single-crystal X-ray diffraction, elemental analysis, and their electrochemical properties examined in solution and in the solid-state. Compared with their iodide analogues, the triiodide salts exhibited lower electrical impedance and higher current in the cyclic voltammetry. We found that poly(4-methyl-1,2,4-triazolium triiodide) was proven to be a promising solid polymer electrolyte candidate. (C) 2017 Elsevier Ltd. All rights reserved.
Cholesteryl Hemisuccinate Monolayers Efficiently Control Calcium Phosphate Nucleation and Growth
(2017)
The article describes the phase behavior of cholesteryl hemisuccinate at the air-liquid interface and its effect on calcium phosphate (CP) mineralization. The amphiphile forms stable monolayers with phase transitions at the air-liquid interface from a gas to a tilted liquid-condensed (TLC) and finally to an untilted liquid-condensed (ULC) phase. CP mineralization beneath these monolayers leads to crumpled CP layers made from individual plates. The main crystal phase is octacalcium phosphate (OCP) along with a minor fraction of hydroxyapatite (HAP), as confirmed by X-ray photoelectron spectroscopy, energy dispersive X-ray spectroscopy, bright field transmission electron microscopy, and electron diffraction.
Composition inversion takes place in equimolar solid mixtures of sodium or ammonium carbonate and calcium chloride with respect to the combination of anions and cations leading to the corresponding chloride and calcite in complete conversion. The transformation takes place spontaneously under a variety of different situations, even in a powdery mixture resting under ambient conditions. Powder X-ray diffraction data and scanning electron microscopy micrographs are presented to describe the course of the reaction and to characterize the reaction products. The incomplete reaction in the interspace between two compressed tablets of pure starting materials leads to an electric potential due to the presence of uncompensated charges.
New hybrid clay materials with good affinity for phosphate ions were developed from a combination of biomass-Carica papaya seeds (PS) and Musa paradisiaca (Plantain peels-PP), ZnCl2 and Kaolinite clay to produce iPS-HYCA and iPP-HYCA composite adsorbents respectively. Functionalization of these adsorbents with an organosilane produced NPS-HYCA and NPP-HYCA composite adsorbents. The pH(pzc) for the adsorbents were 7.83, 6.91, 7.66 and 6.55 for iPS-HYCA, NPS-HYCA, iPP-HYCA and NPP-HYCA respectively. Using the Brouer-Sotolongo isotherm model which best predict the adsorption capacity of composites for phosphate, iPP-HYCA, iPS-HYCA, NPP-HYCA, and NPS-HYCA composite adsorbents respectively. When compared with some commercial resins, the amino-functionalized adsorbents had better adsorption capacities. Furthermore, amino-functionalized adsorbents showed improved adsorption capacity and rate of phosphate uptake (as much as 40-fold), as well as retain 94% (for NPS-HYCA) and 84.1% (for NPP-HYCA) efficiency for phosphate adsorption after 5 adsorption-desorption cycles (96 h of adsorption time with 100 mg/L of phosphate ions) as against 37.5% (for iPS-HYCA) and 35% (for iPP-HYCA) under similar conditions. In 25 min desorption of phosphate ion attained equilibrium. These new amino-functionalized hybrid clay composite adsorbents, which were prepared by a simple means that is sustainable, have potentials for the efficient capture of phosphate ions from aqueous solution. They are quickly recovered from aqueous solution, non-biodegradable (unlike many biosorbent) with potentials to replace expensive adsorbents in the future. They have the further advantage of being useful in the recovery of phosphate for use in agriculture which could positively impact the global food security programme. (C) 2017 Elsevier Ltd. All rights reserved.
Novel metal-doped bacteriostatic hybrid clay composites for point-of-use disinfection of water
(2017)
This study reports the facile microwave-assisted thermal preparation of novel metal-doped hybrid clay composite adsorbents consisting of Kaolinite clay, Carica papaya seeds and/or plantain peels (Musa paradisiaca) and ZnCl2. Fourier Transformed IR spectroscopy, X-ray diffraction, Scanning Electron Microscopy and Brunauer-Emmett-Teller (BET) analysis are employed to characterize these composite adsorbents. The physicochemical analysis of these composites suggests that they act as bacteriostatic rather than bacteriacidal agents. This bacterostactic action is induced by the ZnO phase in the composites whose amount correlates with the efficacy of the composite. The composite prepared with papaya seeds (PS-HYCA) provides the best disinfection efficacy (when compared with composite prepared with Musa paradisiaca peels-PP-HYCA) against gram-negative enteric bacteria with a breakthrough time of 400 and 700 min for the removal of 1.5 x10(6) cfu/mL S. typhi and V. cholerae from water respectively. At 10(3) cfu/mL of each bacterium in solution, 2 g of both composite adsorbents kept the levels the bacteria in effluent solutions at zero for up to 24 h. Steam regeneration of 2 g of bacteria-loaded Carica papaya prepared composite adsorbent shows a loss of ca. 31% of its capacity even after the 3rd regeneration cycle of 25 h of service time. The composite adsorbent prepared with Carica papaya seeds will be useful for developing simple point-of-use water treatment systems for water disinfection application. This composite adsorbent is comparatively of good performance and shows relatively long hydraulic contact times and is expected to minimize energy intensive traditional treatment processes.
The article describes the synthesis and properties of alpha-((4-cyanobenzoyl)oxy)-omega-methyl poly(ethylene glycol), the first poly(ethylene glycol) stabilizer for metal nanoparticles that is based on a cyano rather than a thiol or thiolate anchor group. The silver particles used to evaluate the effectiveness of the new stabilizer typically have a bimodal size distribution with hydrodynamic diameters of ca. 13 and ca. 79 nm. Polymer stability was evaluated as a function of the pH value both for the free stabilizer and for the polymers bound to the surface of the silver nanoparticles using H-1 NMR spectroscopy and zeta potential measurements. The polymer shows a high stability between pH 3 and 9. At pH 12 and higher the polymer coating is degraded over time suggesting that alpha-((4-cyanobenzoyl) oxy)-omega-methyl poly(ethylene glycol) is a good stabilizer for metal nanoparticles in aqueous media unless very high pH conditions are present in the system. The study thus demonstrates that cyano groups can be viable alternatives to the more conventional thiol/thiolate anchors.
The article describes the synthesis and properties of new ionogels for ion transport. A new preparation process using an organic linker, bis(3-(trimethoxysilyl) propyl) amine (BTMSPA), yields stable organosilica matrix materials. The second ionogel component, the ionic liquid 1-methyl-3-(4-sulfobutyl) imidazolium 4-methylbenzenesulfonate, [BmimSO(3)H][PTS], can easily be prepared with near-quantitative yields. [BmimSO(3)H][PTS] is the proton conducting species in the ionogel. By combining the stable organosilica matrix with the sulfonated ionic liquid, mechanically stable, and highly conductive ionogels with application potential in sensors or fuel cells can be prepared.
In der vorliegenden Arbeit wurden verschiedene Polymere hergestellt, die bestimmte funktionelle Gruppen beinhalten. Diese Gruppen werden zum Teil durch Alkylketten geschützt, zum Teil liegen sie ungeschützt im Polymer vor. Mit diesen Polymeren wurden Untersuchungen mit knochenähnlichen Materialien sogenanntem Calciumphosphat durchgeführt. Es wurde der Einfluss der verschiedenen Polymere auf die Bildung dieser knochenähnlichen Substanzen untersucht und auch der Einfluss auf die Stabilität und das Auflösungsverhalten der Calciumphosphate. Dabei sollte ein besonderes Augenmerk auf die funktionellen Gruppen, sogenannte Phosphonsäuren und deren Ester, die die Phosphonsäuren schützen, gesetzt werden. Es stellte sich heraus, dass bei der Bildung der knochenähnlichen Materialien die Polymere mit Estergruppen eine leichte Förderung der Calciumphosphat-Bildung verursachen, während die ungeschützten Polymere die Bildung des „Knochenmaterials“ sehr stark verzögern. Dieser Effekt verstärkt sich noch, wenn eine weitere bestimmte Komponente zum Polymer hinzukommt und somit ein Copolymer gebildet wird. Diese Copolymere beschleunigen bzw. verlangsamen die Calciumphosphatbildung noch stärker. Werden Polymere mit einem anderen Polymergerüst aber den gleichen Phosphonsäuresetern in den Seitenketten verwendet, ändert sich der Einfluss der Calciumphosphat-Bildung wenig. Verglichen mit Polymeren ohne solche Phosphonsäuregruppen wird erkennbar, dass es weniger die Phosphonsäuregruppe ist, die die Mineralisation beeinflusst, sondern es eher eine Folge der Säure im Polymer ist.
Wird die Stabilisierung und Auflösung der Knochenähnlichen Substanzen betrachtet, fällt auf, dass auch hier wieder die Säuren den größten Effekt ausüben. Die Phosphonsäuregruppen scheinen dabei jedoch tatsächlich einen besonderen Effekt auszuüben, da bei diesen die Stabilisierung und auch das Auflösungsvermögen von Calciumphospaht von allen untersuchten Polymeren am größten sind.
In der Arbeit konnte außerdem gezeigt werden, dass die Polymere und Copolymere mit Phosphonsäuregruppen einen leicht positiven Effekt auf die Zahngesundheit zeigen. Die Zahl von Bakterien auf der Zahnoberfläche konnte reduziert werden und bei der Untersuchung der Zahnauflösung wurde eine glattere Zahnoberfläche erhalten, jedoch wurde auch mit den untersuchten Polymeren der Zahn im Inneren angegriffen. Weitere Untersuchungen können hier noch genaueren Aufschluss geben. Außerdem sollten auch die Polymere mit dem unterschiedlichen Polymergerüst und Phosphonsäureestergruppen untersucht werden.
Letztere Polymere wurden verwendet, um festere “gelartige“ Polymernetzwerke herzustellen und deren Einfluss auf die Calciumphosphatmineralisation zu untersuchen. Es stellte sich heraus, dass ohne das Einbetten einiger Calciumphosphatteilchen keine Bildung von Calciumphospaht an den Materialien ausgelöst wurde, wurden die sogenannten Hydrogele jedoch mit Calciumphosphatpartikeln geimpft, konnte deutliches weiteres Calciumphosphatwachstum beobachtet werden. Das Material lässt sich auch in verschiedene Formen bringen. Somit könnte das System nach weiteren Untersuchungen zur Verträglichkeit mit Zellen oder Geweben ein mögliches Material für Implantate darstellen, mit denen gezielt Knochenwachstum eingeleitet werden könnte.
In der vorliegenden Arbeit konnten erfolgreich zwei unterschiedliche Hybridmaterialien (HM) über die Sol-Gel-Methode synthetisiert werden. Bei den HM handelt es sich um Monolithe mit einem Durchmesser von bis zu 4,5 cm. Das erste HM besteht aus Titandioxid und Bombyx mori Seide und wird als TS bezeichnet, während das zweite weniger Seide und zusätzlich Polyethylenoxid (PEO) enthält und daher als TPS abgekürzt wird. Einige der HM wurden nach der Synthese in eine wässrige Tetrachloridogoldsäure-Lösung getaucht, wodurch sich auf der Oberfläche Goldnanopartikel gebildet haben.
Die Materialien wurden mittels Elektronenmikroskopie, energiedispersiver Röntgenspektroskopie, Ramanspektroskopie sowie Röntgenpulverdiffraktometrie charakterisiert. Die Ergebnisse zeigen, dass beide HM aus etwa 5 nm großen, sphärischen Titandioxidnanopartikeln aufgebaut sind, die primär aus Anatas und zu einem geringen Anteil aus Brookit bestehen. Die Goldnanopartikel bei TPS_Au waren größer und polydisperser als die Goldnanopartikel auf dem TS_Au HM. Darüber hinaus sind die Goldnanopartikel im TS HM tiefer in das Material eingedrungen als beim TPS HM.
Die weiterführende Analyse der HM mittels Elementaranalyse und thermogravimetrischer Analyse ergab für TPS einen geringeren Anteil an organischen Bestandteilen im HM als für TS, obwohl für beide Synthesen die gleiche Masse an organischen Materialien eingesetzt wurde. Es wird vermutet, dass das PEO während der Synthese teilweise wieder aus dem Material herausgewaschen wird. Diese Theorie korreliert mit den Ergebnissen aus der Stickstoffsorption und der Quecksilberporosimetrie, die für das TPS HM eine höhere Oberfläche als für das TS HM anzeigten.
Die Variation einiger Syntheseparameter wie die Menge an Seide und PEO oder die Zusammensetzung der Titandioxidvorläuferlösung hatte einen großen Einfluss auf die synthetisierten HM. Während unterschiedliche Mengen an PEO die Größe des HM beeinflussten, konnte ohne Seide kein HM in einer ähnlichen Größe hergestellt werden. Die Bildung der HM wird stark von der Zusammensetzung der Titandioxidvorläuferlösung beeinflusst. Eine Veränderung führte daher nur selten zur Bildung eines homogenen HM.
Die in dieser Arbeit synthetisierten HM wurden als Photokatalysatoren für die Wasserspaltung und den Abbau von Methylenblau eingesetzt. Bei der photokatalytischen Wasserspaltung wurde zunächst der Einfluss unterschiedlicher Goldkonzentrationen beim TPS HM auf die Wasserstoffausbeute untersucht. Die besten Ergebnisse wurden bei einer Menge von 2,5 mg Tetrachloridogoldsäure erhalten. Darüber hinaus wurde gezeigt, dass mit dem TPS HM eine deutlich höhere Menge an Wasserstoff gewonnen werden konnte als mit dem TS HM. Die Ursachen für die schlechtere Aktivität werden in der geringeren spezifischen Oberfläche, der unterschiedlichen Porenstruktur, dem höheren Anteil an Seide und besonders in der geringeren Größe und höheren Eindringtiefe der Goldnanopartikel vermutet. Darüber hinaus konnte mit einem höheren UV-Anteil in der Lichtquelle sowie durch die Zugabe von Ethanol als Opferreagenz eine Zunahme der Wasserstoffausbeute erzielt werden.
Bei dem Methylenblauabbau wurde für beide HM zunächst nur eine Adsorption des Methylenblaus beobachtet. Nach der Zugabe von Wasserstoffperoxid konnte nach 8 h bereits eine fast vollständige Oxidation des Methylenblaus unter sichtbarem Licht beobachtet werden. Die Ursache für die etwas höhere Aktivität von TPS gegenüber TS wird in der unterschiedlichen Porenstruktur und dem höheren Anteil an Seide im TS HM vermutet. Insgesamt zeigen beide HM eine gute photokatalytische Aktivität für den Abbau von Methylenblau im Vergleich zu den erhaltenen Werten aus der Literatur.
Magnetische Eisenoxidnanopartikel werden bereits seit geraumer Zeit erfolgreich als MRT-Kontrastmittel in der klinischen Bildgebung eingesetzt. Durch Optimierung der magnetischen Eigenschaften der Nanopartikel kann die Aussagekraft von MR-Aufnahmen verbessert und somit der diagnostische Wert einer MR-Anwendung weiter erhöht werden. Neben der Verbesserung bestehender Verfahren wird die bildgebende Diagnostik ebenso durch die Entwicklung neuer Verfahren, wie dem Magnetic Particle Imaging, vorangetrieben. Da hierbei das Messsignal von den magnetischen Nanopartikeln selbst erzeugt wird, birgt das MPI einen enormen Vorteil hinsichtlich der Sensitivität bei gleichzeitig hoher zeitlicher und räumlicher Auflösung. Da es aktuell jedoch keinen kommerziell vertriebenen in vivo-tauglichen MPI-Tracer gibt, besteht ein dringender Bedarf an geeigneten innovativen Tracermaterialien. Daraus resultierte die Motivation dieser Arbeit biokompatible und superparamagnetische Eisenoxidnanopartikel für den Einsatz als in vivo-Diagnostikum insbesondere im Magnetic Particle Imaging zu entwickeln. Auch wenn der Fokus auf der Tracerentwicklung für das MPI lag, wurde ebenso die MR-Performance bewertet, da geeignete Partikel somit alternativ oder zusätzlich als MR-Kontrastmittel mit verbesserten Kontrasteigenschaften eingesetzt werden könnten.
Die Synthese der Eisenoxidnanopartikel erfolgte über die partielle Oxidation von gefälltem Eisen(II)-hydroxid und Green Rust sowie eine diffusionskontrollierte Kopräzipitation in einem Hydrogel.
Mit der partiellen Oxidation von Eisen(II)-hydroxid und Green Rust konnten erfolgreich biokompatible und über lange Zeit stabile Eisenoxidnanopartikel synthetisiert werden. Zudem wurden geeignete Methoden zur Formulierung und Sterilisierung etabliert, wodurch zahlreiche Voraussetzungen für eine Anwendung als in vivo-Diagnostikum geschaffen wurden. Weiterhin ist auf Grundlage der MPS-Performance eine hervorragende Eignung dieser Partikel als MPI-Tracer zu erwarten, wodurch die Weiterentwicklung der MPI-Technologie maßgeblich vorangetrieben werden könnte. Die Bestimmung der NMR-Relaxivitäten sowie ein initialer in vivo-Versuch zeigten zudem das große Potential der formulierten Nanopartikelsuspensionen als MRT-Kontrastmittel. Die Modifizierung der Partikeloberfläche ermöglicht ferner die Herstellung zielgerichteter Nanopartikel sowie die Markierung von Zellen, wodurch das mögliche Anwendungsspektrum maßgeblich erweitert wurde.
Im zweiten Teil wurden Partikel durch eine diffusionskontrollierte Kopräzipitation im Hydrogel, wobei es sich um eine bioinspirierte Modifikation der klassischen Kopräzipitation handelt, synthetisiert, wodurch Partikel mit einer durchschnittlichen Kristallitgröße von 24 nm generiert werden konnten. Die Bestimmung der MPS- und MR-Performance elektrostatisch stabilisierter Partikel ergab vielversprechende Resultate. In Vorbereitung auf die Entwicklung eines in vivo-Diagnostikums wurden die Partikel anschließend erfolgreich sterisch stabilisiert, wodurch der kolloidale Zustand in MilliQ-Wasser über lange Zeit aufrechterhalten werden konnte. Durch Zentrifugation konnten die Partikel zudem erfolgreich in verschiedene Größenfraktionen aufgetrennt werden. Dies ermöglichte die Bestimmung der idealen Aggregatgröße dieses Partikelsystems in Bezug auf die MPS-Performance.
Ionogels (IGs) based on poly(methyl methacrylate) (PMMA) and the metal-containing ionic liquids (ILs) bis-1-butyl-3-methlimidazolium tetrachloridocuprate(II), tetrachloride cobaltate(II), and tetrachlorido manganate(II) have been synthesized and their mechanical and electrical properties have been correlated with their microstructure. Unlike many previous examples, the current IGs show a decreasing stability in stress-strain experiments on increasing IL fractions. The conductivities of the current IGs are lower than those observed in similar examples in the literature. Both effects are caused by a two-phase structure with micrometer-sized IL-rich domains homogeneously dispersed an IL-deficient continuous PMMA phase. This study demonstrates that the IL-polymer miscibility and the morphology of the IGs are key parameters to control the (macroscopic) properties of IGs.
In der vorliegenden Arbeit konnte gezeigt werden, dass die beiden verwendeten Amphiphile mit Cholesterol als hydrophoben Block, gute Template für die Mineralisation von Calciumphosphat an der Wasser/Luft-Grenzfläche sind. Mittels Infrarot-Reflexions-Absorptions-Spektroskopie (IRRAS), Röntgenphotoelektronenspektroskopie (XPS), Energie dispersiver Röntgenspektroskopie (EDXS), Elektronenbeugung (SAED) und hochauflösende Transmissionselektronenmikroskopie (HRTEM) konnte die erfolgreiche Mineralisation von Calciumphosphat für beide Amphiphile an der Wasser/Luft-Grenzfläche nachgewiesen werden. Es konnte auch gezeigt werden, dass das Phasenverhalten der beiden Amphiphile und die bei der Mineralisation von Calciumphosphat gebildeten Kristallphasen nicht identisch sind. Beide Amphiphile üben demnach einen unterschiedlichen Einfluss auf den Mineralisationsverlauf aus.
Beim CHOL-HEM konnte sowohl nach 3 h als auch nach 5 h Octacalciumphosphat (OCP) als einzige Kristallphase mittels XPS, SAED, HRTEM und EDXS nachgewiesen werden. Das A-CHOL hingegen zeigte bei der Mineralisation von Calciumphosphat nach 1 h zunächst eine nicht eindeutig identifizierbare Vorläuferphase aus amorphen Calciumphosphat, Brushit (DCPD) oder OCP. Diese wandelte sich dann nach 3 h und 5 h in ein Gemisch, bestehend aus OCP und ein wenig Hydroxylapatit (HAP) um.
Die Schlussfolgerung daraus ist, dass das CHOL-HEM in der Lage ist, dass während der Mineralisation entstandene OCP zu stabilisieren. Dies geschieht vermutlich durch die Adsorption des Amphiphils bevorzugt an der OCP Oberfläche in [100] Orientierung. Dadurch wird die Spaltung entlang der c-Achse unterdrückt und die Hydrolyse zum HAP verhindert.
Das A-CHOL ist hingegen sterisch anspruchsvoller und kann wahrscheinlich aufgrund seiner Größe nicht so gut an der OCP Kristalloberfläche adsorbieren verglichen zum CHOL HEM. Das CHOL-HEM kann also die Hydrolyse von OCP zu HAP besser unterdrücken als das A-CHOL. Da jedoch auch beim A-CHOL nach einer Mineralisationszeit von 5 h nur wenig HAP zu finden ist, wäre auch hier ein Stabilisierungseffekt der OCP Kristalle möglich. Um eine genaue Aussage darüber treffen zu können, sind jedoch zusätzliche Kontrollexperimente notwendig. Es wäre zum einen denkbar, die Mineralisationsexperimente über einen längeren Zeitraum durchzuführen. Diese könnten zeigen, ob das CHOL-HEM die Hydrolyse vom OCP zum HAP komplett unterdrückt. Außerdem könnte nachgewiesen werden, ob beim A-CHOL das OCP weiter zum HAP umgesetzt wird oder ob ein Gemisch beider Kristallphasen erhalten bleibt.
Um die Mineralisation an der Wasser/Luft-Grenzfläche mit der Mineralisation in Bulklösung zu vergleichen, wurden zusätzlich Mineralisationsexperimente in Bulklösung durchgeführt. Dazu wurden Nitrilotriessigsäure (NTA) und Ethylendiamintetraessigsäure (EDTA) als Mineralisationsadditive verwendet, da NTA unter anderem der Struktur der hydrophilen Kopfgruppe des A-CHOLs ähnelt. Es konnte gezeigt werden, dass ein Vergleich der Mineralisation an der Grenzfläche mit der Mineralisation in Bulklösung nicht ohne weiteres möglich ist. Bei der Mineralisation in Bulklösung wird bei tiefen pH-Werten DCPD und bei höheren pH-Werten HAP gebildet. Diese wurde mittels Röntgenpulverdiffraktometrie Messungen nachgewiesen und durch Infrarotspektroskopie bekräftigt. Die Bildung von OCP wie an der Wasser/Luft-Grenzfläche konnte nicht beobachtet werden.
Es konnte auch gezeigt werden, dass beide Additive NTA und EDTA einen unterschiedlichen Einfluss auf den Verlauf der Mineralisation nehmen. So unterscheiden sich zum einen die Morphologien des gebildeten DCPDs und zum anderen wurde beispielsweise in Anwesenheit von 10 und 15 mM NTA neben DCPD auch HAP bei einem Ausgangs-pH-Wert von 7 nachgewiesen.
Da unser Augenmerk speziell auf der Mineralisation von Calciumphosphat an der Wasser/Luft-Grenzfläche liegt, könnten Folgeexperimente wie beispielsweise GIXD Messungen durchgeführt werden. Dadurch wäre es möglich, einen Überblick über die gebildeten Kristallphasen nach unterschiedlichen Reaktionszeiten direkt auf dem Trog zu erhalten.
Es konnte weiterhin gezeigt werden, dass auch einfache Amphiphile in der Lage sind, die Mineralisation von Calciumphosphat zu steuern. Amphiphile mit Cholesterol als hydrophoben Block bilden offensichtlich besonders stabile Monolagen an der Wasser/Luft-Grenzfläche. Eine Untersuchung des Einflusses ähnlicher Amphiphile mit unterschiedlichen hydrophilen Kopfgruppen auf das Mineralisationsverhalten von Calciumphosphat wäre durchaus interessant.
Thermal cis-trans isomerization of azobenzene studied by path sampling and QM/MM stochastic dynamics
(2017)
Azobenzene-based molecular photoswitches have extensively been applied to biological systems, involving photo-control of peptides, lipids and nucleic acids. The isomerization between the stable trans and the metastable cis state of the azo moieties leads to pronounced changes in shape and other physico-chemical properties of the molecules into which they are incorporated. Fast switching can be induced via transitions to excited electronic states and fine-tuned by a large number of different substituents at the phenyl rings. But a rational design of tailor-made azo groups also requires control of their stability in the dark, the half-lifetime of the cis isomer. In computational chemistry, thermally activated barrier crossing on the ground state Born-Oppenheimer surface can efficiently be estimated with Eyring’s transition state theory (TST) approach; the growing complexity of the azo moiety and a rather heterogeneous environment, however, may render some of the underlying simplifying assumptions problematic.
In this dissertation, a computational approach is established to remove two restrictions at once: the environment is modeled explicitly by employing a quantum mechanical/molecular mechanics (QM/MM) description; and the isomerization process is tracked by analyzing complete dynamical pathways between stable states. The suitability of this description is validated by using two test systems, pure azo benzene and a derivative with electron donating and electron withdrawing substituents (“push-pull” azobenzene). Each system is studied in the gas phase, in toluene and in polar DMSO solvent. The azo molecules are treated at the QM level using a very recent, semi-empirical approximation to density functional theory (density functional tight binding approximation). Reactive pathways are sampled by implementing a version of the so-called transition path sampling method (TPS), without introducing any bias into the system dynamics. By analyzing ensembles of reactive trajectories, the change in isomerization pathway from linear inversion to rotation in going from apolar to polar solvent, predicted by the TST approach, could be verified for the push-pull derivative. At the same time, the mere presence of explicit solvation is seen to broaden the distribution of isomerization pathways, an effect TST cannot account for.
Using likelihood maximization based on the TPS shooting history, an improved reaction coordinate was identified as a sine-cosine combination of the central bend angles and the rotation dihedral, r (ω,α,α′). The computational van’t Hoff analysis for the activation entropies was performed to gain further insight into the differential role of solvent for the case of the unsubstituted and the push-pull azobenzene. In agreement with the experiment, it yielded positive activation entropies for azobenzene in the DMSO solvent while negative for the push-pull derivative, reflecting the induced ordering of solvent around the more dipolar transition state associated to the latter compound. Also, the dynamically corrected rate constants were evaluated using the reactive flux approach where an increase comparable to the experimental one was observed for a high polarity medium for both azobenzene derivatives.
This cumulative doctoral dissertation, based on three publications, is devoted to the investigation of several aspects of azobenzene molecular switches, with the aid of computational chemistry.
In the first paper, the isomerization rates of a thermal cis → trans isomerization of azobenzenes for species formed upon an integer electron transfer, i.e., with added or removed electron, are calculated from Eyring’s transition state theory and activation energy barriers, computed by means of density functional theory. The obtained results are discussed in connection with an experimental study of the thermal cis → trans isomerization of azobenzene derivatives in the presence of gold nanoparticles, which is demonstrated to be greatly accelerated in comparison to the same isomerization reaction in the absence of nanoparticles.
The second paper is concerned with electronically excited states of (i) dimers, composed of two photoswitchable units placed closely side-by-side, as well as (ii) monomers and dimers adsorbed on a silicon cluster. A variety of quantum chemistry methods, capable of calculating molecular electronic absorption spectra, based on density functional and wave function theories, is employed to quantify changes in optical absorption upon dimerization and covalent grafting to a surface. Specifically, the exciton (Davydov) splitting between states of interest is determined from first-principles calculations with the help of natural transition orbital analysis, allowing for insight into the nature of excited states.
In the third paper, nonadiabatic molecular dynamics with trajectory surface hopping is applied to model the photoisomerization of azobenzene dimers, (i) for the isolated case (exhibiting the exciton coupling between two molecules) as well as (ii) for the constrained case (providing the van der Waals interaction with environment in addition to the exciton coupling between two monomers). For the latter, the additional azobenzene molecules, surrounding the dimer, are introduced, mimicking a densely packed self-assembled monolayer. From obtained results it is concluded that the isolated dimer is capable of isomerization likewise the monomer, whereas the steric hindrance considerably suppresses trans → cis photoisomerization.
Furthermore, the present dissertation comprises the general introduction describing the main features of the azobenzene photoswitch and objectives of this work, theoretical basis of the employed methods, and discussion of gained findings in the light of existing literature. Also, additional results on (i) activation parameters of the thermal cis → trans isomerization of azobenzenes, (ii) an approximate scheme to account for anharmonicity of molecular vibrations in calculation of the activation entropy, as well as (iii) absorption spectra of photoswitch–silicon composites obtained from time-demanding wave function-based methods are presented.
A variety of azobenzenes were synthesized to study the behavior of their E and Z isomers upon electrochemical reduction. Our results show that the radical anion of the Z isomer is able to rapidly isomerize to the corresponding E configured counterpart with a dramatically enhanced rate as compared to the neutral species. Due to a subsequent electron transfer from the formed E radical anion to the neutral Z starting material the overall transformation is catalytic in electrons; i.e., a substoichiometric amount of reduced species can isomerize the entire mixture. This pathway greatly increases the efficiency of (photo)switching while also allowing one to reach photostationary state compositions that are not restricted to the spectral separation of the individual azobenzene isomers and their quantum yields. In addition, activating this radical isomerization pathway with photoelectron transfer agents allows us to override the intrinsic properties of an azobenzene species by triggering the reverse isomerization direction (Z -> E) by the same wavelength of light, which normally triggers E -> Z isomerization. The behavior we report appears to be general, implying that the metastable isomer of a photoswitch can be isomerized to the more stable one catalytically upon reduction, permitting the optimization of azobenzene switching in new as well as indirect ways.
Molecular dynamics simulations in conjunction with the Martini coarse-grained model have been used to investigate the (nonequilibrium) behavior of helical 22-residue poly(gamma-benzyl-L-glutamate) (PBLG) peptides at the water/vapor interface. Preformed PBLG mono- or bilayers homogeneously covering the water surface laterally collapse in tens of nanoseconds, exposing significant proportions of empty water surface. This behavior was also observed in recent AFM experiments at similar areas per monomer, where a complete coverage had been assumed in earlier work. In the simulations, depending on the area per monomer, either elongated clusters or fibrils form, whose heights (together with the portion of empty water surface) increase over time. Peptides tend to align with respect to the fiber axis or with the major principal axis of the cluster, respectively. The aspect ratio of the cluster observed is 1.7 and, hence, comparable to though somewhat smaller than the aspect ratio of the peptides in alpha-helical conformation, which is 2.2. The heights of the fibrils is 3 nm after 20 ns and increases to 4.5 nm if the relaxation time is increased by 2 orders of magnitude, in agreement with the experiment. Aggregates with heights of about 3 or 4.5 nm are found to correspond to local bi- or trilayer structures, respectively.
A series of new fluorescent dye bearing monomers, including glycomonomers, based on maleamide and maleic esteramide was synthesized. The dye monomers were incorporated by radical copolymerization into thermo-responsive poly(N-vinyl-caprolactam) that displays a lower critical solution temperature (LCST) in aqueous solution. The effects of the local molecular environment on the polymers' luminescence, in particular on the fluorescence intensity and the extent of solvatochromism, were investigated below as well as above the phase transition. By attaching substituents of varying size and polarity in the close vicinity of the fluorophore, and by varying the spacer groups connecting the dyes to the polymer backbone, we explored the underlying structure-property relationships, in order to establish rules for successful sensor designs, e.g., for molecular thermometers. Most importantly, spacer groups of sufficient length separating the fluorophore from the polymer backbone proved to be crucial for obtaining pronounced temperature regulated fluorescence responses.
The effect of cellulose-based polyelectrolytes on biomimetic calcium phosphate mineralization is described. Three cellulose derivatives, a polyanion, a polycation, and a polyzwitterion were used as additives. Scanning electron microscopy, X-ray diffraction, IR and Raman spectroscopy show that, depending on the composition of the starting solution, hydroxyapatite or brushite precipitates form. Infrared and Raman spectroscopy also show that significant amounts of nitrate ions are incorporated in the precipitates. Energy dispersive X-ray spectroscopy shows that the Ca/P ratio varies throughout the samples and resembles that of other bioinspired calcium phosphate hybrid materials. Elemental analysis shows that the carbon (i.e., polymer) contents reach 10% in some samples, clearly illustrating the formation of a true hybrid material. Overall, the data indicate that a higher polymer concentration in the reaction mixture favors the formation of polymer-enriched materials, while lower polymer concentrations or high precursor concentrations favor the formation of products that are closely related to the control samples precipitated in the absence of polymer. The results thus highlight the potential of (water-soluble) cellulose derivatives for the synthesis and design of bioinspired and bio-based hybrid materials.
Six N-alkylpyridinium salts [CnPy](2)[MCl4] (n = 4 or 12 and M = Co, Cu, Zn) were synthesized, and their structure and thermal properties were studied. The [C4Py](2)[MCl4] compounds are monoclinic and crystallize in the space group P2(1)/n. The crystals of the longer chain analogues [C12Py](2)[MCl4] are triclinic and crystallize in the space group P (1) over bar. Above the melting temperature, all compounds are ionic liquids (ILs). The derivatives with the longer C12 chain exhibit liquid crystallinity and the shorter chain compounds only show a melting transition. Consistent with single-crystal analysis, electron paramagnetic resonance spectroscopy suggests that the [CuCl4](2-) ions in the Cu-based ILs have a distorted tetrahedral geometry.
Six N-alkylpyridinium salts [CnPy](2)[MCl4] (n = 4 or 12 and M = Co, Cu, Zn) were synthesized, and their structure and thermal properties were studied. The [C4Py](2)[MCl4] compounds are monoclinic and crystallize in the space group P2(1)/n. The crystals of the longer chain analogues [C12Py](2)[MCl4] are triclinic and crystallize in the space group P (1) over bar. Above the melting temperature, all compounds are ionic liquids (ILs). The derivatives with the longer C12 chain exhibit liquid crystallinity and the shorter chain compounds only show a melting transition. Consistent with single-crystal analysis, electron paramagnetic resonance spectroscopy suggests that the [CuCl4](2-) ions in the Cu-based ILs have a distorted tetrahedral geometry.
The thermal Z -> E (back-) isomerization of azobenzenes is a prototypical reaction occurring in molecular switches. It has been studied for decades, yet its kinetics is not fully understood. In this paper, quantum chemical calculations are performed to model the kinetics of an experimental benchmark system, where a modified azobenzene (AzoBiPyB) is embedded in a metal-organic framework (MOF). The molecule can be switched thermally from cis to trans, under solvent-free conditions. We critically test the validity of Eyring transition state theory for this reaction. As previously found for other azobenzenes (albeit in solution), good agreement between theory and experiment emerges for activation energies and activation free energies, already at a comparatively simple level of theory, B3LYP/6-31G* including dispersion corrections. However, theoretical Arrhenius prefactors and activation entropies are in qualitiative disagreement with experiment. Several factors are discussed that may have an influence on activation entropies, among them dynamical and geometric constraints (imposed by the MOF). For a simpler model-Z -> E isomerization in azobenzene-a systematic test of quantum chemical methods from both density functional theory and wavefunction theory is carried out in the context of Eyring theory. Also, the effect of anharmonicities on activation entropies is discussed for this model system. Our work highlights capabilities and shortcomings of Eyring transition state theory and quantum chemical methods, when applied for the Z -> E (back-) isomerization of azobenzenes under solvent-free conditions.
N-terminal methacrylation of peptide MAXI, which is capable of conformational changes variation of the pH, results in a peptide, named VK20. Increasing the reactivity of this terminal group enables further coupling reactions or chemical modifications of the peptidc. However, this end group functionalization may influence the ability of confonnational changes of VK20; as well as its properties. In this paper; the influence of pH on the transition between random coil and beta-sheet conformation of VK20; including the transition kinetics, were investigated. At pH values of 9 and higher, the kinetics beta-sheet formation increased tor VK(2 0, compared to MAXI. The self-assembly into beta-sheets recognized by the formation of a physically crosslinked gel was furthermore indicated by a significant increase of G. An increase in pH (from 9 to 9.5) led to a faster gelation of the peptide VK20. Simultaneously, G was increased from 460 +/- 70 Pa (at pH 9) to 1520 +/- 180 Pa (at pH 9.5). At the nanoscale, the gel showed a highly interconnected fibrillar/network structure with uniform fibril widths of approximately 3.4 +/- 0.5 nm (N=30). The recovery of the peptide conformation back to random coil resulted in the dissolution of the gel; whereby the kinetics of the recovery depended on the pH. Conclusively, the ability of MAXI to undergo confommtional changes was not affected by N-terminal methacrylation whereas the kinetics of pH-sensitive beta-sheet formations has been increased.
We report on photoinduced remote control of work function and surface potential of a silicon surface modified with a photosensitive self-assembled monolayer consisting of chemisorbed azobenzene molecules (4-nitroazobenzene). Itwas found that the attachment of the organic monolayer increases the work function by hundreds of meV due to the increase in the electron affinity of silicon substrates. The change in the work function on UV light illumination is more pronounced for the azobenzene jacketed silicon substrate (ca. 250 meV) in comparison to 50 meV for the unmodified surface. Moreover, the photoisomerization of azobenzene results in complex kinetics of thework function change: immediate decrease due to light-driven processes in the silicon surface followed by slower recovery to the initial state due to azobenzene isomerization. This behavior could be of interest for electronic devices where the reaction on irradiation should be more pronounced at small time scales but the overall surface potential should stay constant over time independent of the irradiation conditions. Published by AIP Publishing.
A new isoflavone, 8-prenylmilldrone (1), and four new rotenoids, oblarotenoids A-D (2-5), along with nine known compounds (6-14), were isolated from the CH2Cl2/CH3OH (1:1) extract of the leaves of Millettia oblata ssp. teitensis by chromatographic separation. The purified compounds were identified by NMR spectroscopic and mass spectrometric analyses, whereas the absolute configurations of the rotenoids were established on the basis of chiroptical data and in some cases by single-crystal X-ray crystallography. Maximaisoflavone J (11) and oblarotenoid C (4) showed weak activity against the human breast cancer cell line MDA-MB-231 with IC50 values of 33.3 and 93.8 mu M, respectively.
The high interfacial activity of protein-polymer conjugates has inspired their use as stabilizers for Pickering emulsions, resulting in many interesting applications such as synthesis of templated micro-compartments and protocells or vehicles for drug and gene delivery. In this study we report, for the first time, the stabilization of Pickering emulsions with conjugates of a genetically modified transmembrane protein, ferric hydroxamate uptake protein component A (FhuA). The lysine residues of FhuA with open pore (FhuA Delta CVFtev) were modified to attach an initiator and consequently controlled radical polymerization (CRP) carried out via the grafting-from technique. The resulting conjugates of FhuA Delta CVFtev with poly(N-isopropylacrylamide) (PNIPAAm) and poly((2-dimethylamino) ethyl methacrylate) (PDMAEMA), the so-called building blocks based on transmembrane proteins (BBTP), have been shown to engender larger structures. The properties such as pH-responsivity, temperature-responsivity and interfacial activity of the BBTP were analyzed using UV-Vis spectrophotometry and pendant drop tensiometry. The BBTP were then utilized for the synthesis of highly stable Pickering emulsions, which could remain non-coalesced for well over a month. A new UV-crosslinkable monomer was synthesized and copolymerized with NIPAAm from the protein. The emulsion droplets, upon crosslinking of polymer chains, yielded micro-compartments. Fluorescence microscopy proved that these compartments are of micrometer scale, while cryo-scanning electron microscopy and scanning force microscopy analysis yielded a thickness in the range of 11.1 +/- 0.6 to 38.0 +/- 18.2 nm for the stabilizing layer of the conjugates. Such micro-compartments would prove to be beneficial in drug delivery applications, owing to the possibility of using the channel of the transmembrane protein as a gate and the smart polymer chains as trigger switches to tune the behavior of the capsules.
The construction of nano-sized, two-dimensionally ordered nanoparticle (NP) superstructures is important for various advanced applications such as photonics, sensing, catalysis, or nano-circuitry. Currently, such structures are fabricated using the templated organization approach, in which the templates are mainly created by photo-lithography or laser-lithography and other invasive top-down etching procedures. In this work, we present an alternative bottom-up preparation method for the controlled deposition of NPs into hierarchical structures. Lamellar polystyrene-block-poly(2-vinylpyridinium) thin films featuring alternating stripes of neutral PS and positively charged P2VP domains serve as templates, allowing for the selective adsorption of negatively charged gold NPs. Dense NP assembly is achieved by a simple immersion process, whereas two-dimensionally ordered arrays of NPs are realized by microcontact printing (mu CP), utilizing periodic polydimethylsiloxane wrinkle grooves loaded with gold NPs. This approach enables the facile construction of hierarchical NP arrays with variable geometries. Copyright (C) 2016 John Wiley & Sons, Ltd.
The combination of stimuli-responsive polymers and proteins that can transport drugs is a promising approach for drug delivery. The formation of ferritin-poly(2-dimethylaminoethyl methacrylate) (PDMAEMA) conjugates by atom-transfer radical polymerization from the protein macroinitiator is described. PDMAEMA is a dual-stimuli-responsive polymer and the thermo- and pH-responsive properties of the resulting conjugates are studied in detail with dynamic light scattering (DLS). Additionally, it is demonstrated that the lower critical solution temperature (LCST) of the protein-polymer conjugates can be further adjusted by the ionic strength of the solution. The conjugates are also characterized by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), matrix-assisted laser desorption ionization-time of flight (MALDI-ToF) mass spectrometry, and NMR spectroscopy. The obtained MALDI-ToF mass spectra are exceptional for protein-polymer conjugates and have not been so often reported.
This work presents a fabrication of thermoresponsive plasmonic core-satellite nanoassemblies. The structure has a silica nanoparticle core surrounded by gold nanoparticle satellites using thermoresponsive poly(N-isopropylacrylamide) (PNIPAM) chains as scaffolds. The thiol-terminated PNIPAM shell is densely grafted on the silica core via surface-initiated reversible addition-fragmentation chain transfer polymerization and used to anchor numerous gold nanoparticle satellites with a tunable stoichiometry. Below and above lower critical solution temperature, the chain conformation of PNIPAM reversibly changes between swollen and shrunken state. The reversible change of the polymer size varies the refractive index of the local medium surrounding the satellites and the distance between them. The two effects together lead to the thermoresponsive plasmonic properties of the nanoassemblies. Under different satellite densities, two distinctive plasmonic features appear.
The isothermal vacuum-induced dehydration of thin films made of poly(methoxy diethylene glycol acrylate) (PMDEGA), which were swollen under ambient conditions, is studied. The dehydration behavior of the homopolymer film as well as of a nanostructured film of the amphiphilic triblock copolymer polystyrene-block-poly(methoxy diethylene glycol acrylate)-block-polystyrene, abbreviated as PS-b-PMDEGA-b-PS, are probed, and compared to the thermally induced dehydration behavior of such thin thermo-responsive films when they pass through their LCST-type coil-to globule collapse transition. The dehydration kinetics is followed by in-situ neutron reflectivity measurements. Contrast results from the use of deuterated water. Water content and film thickness are significantly reduced during the process, which can be explained by Schott second order kinetics theory for both films. The water content of the dehydrated equilibrium state from this model is very close to the residual water content obtained from the final static measurements, indicating that residual water still remains in the film even after prolonged exposure to the vacuum. In the PS-b-PMDEGA-b-PS film that shows micro-phase separation, the hydrophobic PS domains modify the dehydration process by hindering the water removal, and thus retarding dehydration by about 30%. Whereas residual water remains tightly bound in the PMDEGA domains, water is completely removed from the PS domains of the block copolymer film. (C) 2017 Elsevier Ltd. All rights reserved.
A series of new sulfobetaine methacrylates, including nitrogen-containing saturated heterocycles, was synthesised by systematically varying the substituents of the zwitterionic group. Radical polymerisation via the RAFT (reversible addition–fragmentation chain transfer) method in trifluoroethanol proceeded smoothly and was well controlled, yielding polymers with predictable molar masses. Molar mass analysis and control of the end-group fidelity were facilitated by end-group labeling with a fluorescent dye. The polymers showed distinct thermo-responsive behaviour of the UCST (upper critical solution temperature) type in an aqueous solution, which could not be simply correlated to their molecular structure via an incremental analysis of the hydrophilic and hydrophobic elements incorporated within them. Increasing the spacer length separating the ammonium and the sulfonate groups of the zwitterion moiety from three to four carbons increased the phase transition temperatures markedly, whereas increasing the length of the spacer separating the ammonium group and the carboxylate ester group on the backbone from two to three carbons provoked the opposite effect. Moreover, the phase transition temperatures of the analogous polyzwitterions decreased in the order dimethylammonio > morpholinio > piperidinio alkanesulfonates. In addition to the basic effect of the polymers’ precise molecular structure, the concentration and the molar mass dependence of the phase transition temperatures were studied. Furthermore, we investigated the influence of added low molar mass salts on the aqueous-phase behaviour for sodium chloride and sodium bromide as well as sodium and ammonium sulfate. The strong effects evolved in a complex way with the salt concentration. The strength of these effects depended on the nature of the anion added, increasing in the order sulfate < chloride < bromide, thus following the empirical Hofmeister series. In contrast, no significant differences were observed when changing the cation, i.e. when adding sodium or ammonium sulfate.
This paper is focused on the temperature-dependent synthesis of gold nanotriangles in a vesicular template phase, containing phosphatidylcholine and AOT, by adding the strongly alternating polyampholyte PalPhBisCarb.
UV-vis absorption spectra in combination with TEM micrographs show that flat gold nanoplatelets are formed predominantly in the presence of the polyampholyte at 45°C. The formation of triangular and hexagonal nanoplatelets can be directly influenced by the kinetic approach, i.e., by varying the polyampholyte dosage rate at 45°C. Corresponding zeta potential measurements indicate that a temperature-dependent adsorption of the polyampholyte on the {111} faces will induce the symmetry breaking effect, which is responsible for the kinetically controlled hindered vertical and preferred lateral growth of the nanoplatelets.