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This thesis investigates the Casimir effect between plates made of normal and superconducting metals over a broad range of temperatures, as well as the Casimir-Polder interaction of an atom to such a surface. Numerical and asymptotical calculations have been the main tools in order to do so. The optical properties of the surfaces are described by dielectric functions or optical conductivities, which are reviewed for common models and have been analyzed with special weight on distributional properties and causality. The calculation of the Casimir energy between two normally conducting plates (cavity) is reviewed and previous work on the contribution to the Casimir energy due to the surface plasmons, present in all metallic cavities, has been generalized to finite temperatures for the first time. In the field of superconductivity, a new analytical continuation of the BCS conductivity to to purely imaginary frequencies has been obtained both inside and outside the extremely dirty limit of vanishing mean free path. The Casimir free energy calculated from this description was shown to coincide well with the values obtained from the two fluid model of superconductivity in certain regimes of the material parameters. The Casimir entropy in a superconducting cavity fulfills the third law of thermodynamics and features a characteristic discontinuity at the phase transition temperature. These effects were equally encountered in the Casimir-Polder interaction of an atom with a superconducting wall. The magnetic dipole coupling of an atom to a metal was shown to be highly sensible to dissipation and especially to the surface currents. This leads to a strong quenching of the magnetic Casimir-Polder energy at finite temperature. Violations of the third law of thermodynamics are encountered in special models, similar to phenomena in the Casimir-effect between two plates, that are debated controversely. None of these effects occurs in the analog electric dipole interaction. The results of this work suggest to reestablish the well-known plasma model as the low temperature limit of a superconductor as in London theory rather than use it for the description of normal metals. Superconductors offer the opportunity to control the dissipation of surface currents to a great extent. This could be used to access experimentally the low frequency optical response of metals, which is strongly connected to the thermal Casimir-effect. Here, differently from corresponding microwave experiments, energy and momentum are independent quantities. A measurement of the total Casimir-Polder interaction of atoms with superconductors seems to be in reach in today’s microchip-based atom-traps and the contribution due to magnetic coupling might be accessed by spectroscopic techniques
Hepcidin-25 (Hep-25) plays a crucial role in the control of iron homeostasis. Since the dysfunction of the hepcidin pathway leads to multiple diseases as a result of iron imbalance, hepcidin represents a potential target for the diagnosis and treatment of disorders of iron metabolism. Despite intense research in the last decade targeted at developing a selective immunoassay for iron disorder diagnosis and treatment and better understanding the ferroportin-hepcidin interaction, questions remain. The key to resolving these underlying questions is acquiring exact knowledge of the 3D structure of native Hep-25. Since it was determined that the N-terminus, which is responsible for the bioactivity of Hep-25, contains a small Cu(II)-binding site known as the ATCUN motif, it was assumed that the Hep-25-Cu(II) complex is the native, bioactive form of the hepcidin. This structure has thus far not been elucidated in detail. Owing to the lack of structural information on metal-bound Hep-25, little is known about its possible biological role in iron metabolism. Therefore, this work is focused on structurally characterizing the metal-bound Hep-25 by NMR spectroscopy and molecular dynamics simulations. For the present work, a protocol was developed to prepare and purify properly folded Hep-25 in high quantities. In order to overcome the low solubility of Hep-25 at neutral pH, we introduced the C-terminal DEDEDE solubility tag. The metal binding was investigated through a series of NMR spectroscopic experiments to identify the most affected amino acids that mediate metal coordination. Based on the obtained NMR data, a structural calculation was performed in order to generate a model structure of the Hep-25-Ni(II) complex. The DEDEDE tag was excluded from the structural calculation due to a lack of NMR restraints. The dynamic nature and fast exchange of some of the amide protons with solvent reduced the overall number of NMR restraints needed for a high-quality structure. The NMR data revealed that the 20 Cterminal Hep-25 amino acids experienced no significant conformational changes, compared to published results, as a result of a pH change from pH 3 to pH 7 and metal binding. A 3D model of the Hep-25-Ni(II) complex was constructed from NMR data recorded for the hexapeptideNi(II) complex and Hep-25-DEDEDE-Ni(II) complex in combination with the fixed conformation of 19 C-terminal amino acids. The NMR data of the Hep-25-DEDEDE-Ni(II) complex indicates that the ATCUN motif moves independently from the rest of the structure. The 3D model structure of the metal-bound Hep-25 allows for future works to elucidate hepcidin’s interaction with its receptor ferroportin and should serve as a starting point for the development of antibodies with improved selectivity.