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- foraging (5)
- fragmentation (5)
- frailty (5)
- freedom (5)
- fruit (5)
- functionalization (5)
- galaxies: haloes (5)
- galaxies: halos (5)
- galaxies: nuclei (5)
- gene regulation (5)
- geovisualization (5)
- giftedness (5)
- glacier (5)
- globular clusters: general (5)
- government (5)
- green chemistry (5)
- groundwater (5)
- groundwater recharge (5)
- gut microbiota (5)
- habitat use (5)
- hazard (5)
- heart failure (5)
- heart rate (5)
- height (5)
- hemoglobin amount (5)
- herbivory (5)
- heritage language (5)
- heteroatoms (5)
- heterosis (5)
- heuristics (5)
- high pressure (5)
- homeostasis (5)
- hospitals (5)
- hydrogen peroxide (5)
- hydrological modeling (5)
- hydrological modelling (5)
- hydropower (5)
- hydrothermal (5)
- hydroxyapatite (5)
- hyperspectral (5)
- hypochondriasis (5)
- hyporheic zone (5)
- ice-sheet (5)
- identity management (5)
- impulsivity (5)
- industry 4.0 (5)
- infection pathway (5)
- information (5)
- inheritance (5)
- inorganic perovskites (5)
- insects (5)
- institutional change (5)
- institutional design (5)
- integral field spectroscopy (5)
- inter-individual differences (5)
- interest (5)
- international relations (5)
- intersectionality (5)
- intimate partner violence (5)
- intraspecific trait variation (5)
- inundation (5)
- ionische Flüssigkeiten (5)
- ionosphere (5)
- island biogeography (5)
- komplexe Netzwerke (5)
- kosmogene Nuklide (5)
- landscape (5)
- language comprehension (5)
- language processing (5)
- laterality (5)
- learning environment (5)
- lexicon size (5)
- lifespan (5)
- lifestyle (5)
- linear term (5)
- lipid membranes (5)
- lipopolysaccharide (5)
- liposomes (5)
- livestock (5)
- local governance (5)
- localization (5)
- locus of control (5)
- logic (5)
- long-term effects (5)
- macrophages (5)
- magnetic nanoparticles (5)
- magnetohydrodynamics (5)
- magnetostratigraphy (5)
- massive stars (5)
- maturity (5)
- mechanical properties (5)
- metabolic network (5)
- metacognition (5)
- metal (5)
- metal-organic frameworks (5)
- microbial interactions (5)
- microbiology (5)
- microcontact printing (5)
- microgels (5)
- micronutrients (5)
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- microsaccades (5)
- microsimulation (5)
- mind wandering (5)
- mineralization (5)
- minimum wage (5)
- mitochondrial genome (5)
- molekulare Motoren (5)
- monoclonal antibodies (5)
- morphologically complex words (5)
- mouse (5)
- multiblock copolymer (5)
- multicore architectures (5)
- multiplicative noise (5)
- museum specimens (5)
- musicality (5)
- narrative (5)
- natural hazard (5)
- neovascularization (5)
- neuromuscular (5)
- new public management (5)
- next-generation sequencing (5)
- nonlinear time series analysis (5)
- norepinephrine (5)
- oncology (5)
- online (5)
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- ontology (5)
- opposition (5)
- optimism (5)
- organizations (5)
- outcome (5)
- oxidation (5)
- paleomagnetism (5)
- palladium (5)
- parental mediation (5)
- partial melting (5)
- participatory research (5)
- particle-in-cell simulations (5)
- pathways (5)
- perceptual reorganization (5)
- periodization (5)
- permafrost degradation (5)
- permeability (5)
- perovskite (5)
- peroxides (5)
- phase separation (5)
- phenomenology (5)
- philosophy (5)
- phonology (5)
- photophysics (5)
- photovoltaics (5)
- physical performance (5)
- physics education (5)
- planet-star interactions (5)
- plant community (5)
- plant functional trait (5)
- plant functional traits (5)
- plateau (5)
- plyometric exercise (5)
- policy advice (5)
- politeness (5)
- political education (5)
- poly(lactic acid) (5)
- polyethylene (5)
- polymer chemistry (5)
- polymer degradation (5)
- polymorphism (5)
- polypeptide (5)
- population genomics (5)
- populations (5)
- pornography (5)
- positive selection (5)
- postural sway (5)
- poverty (5)
- predictability (5)
- preferences (5)
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- pressure (5)
- presupposition (5)
- private households (5)
- probabilistic (5)
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- problem solving (5)
- process mining (5)
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- prosocial behavior (5)
- protein modification (5)
- protein-protein interactions (5)
- psychometric properties (5)
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- pupillometry (5)
- purification (5)
- qualitative analysis (5)
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- quantitative analysis (5)
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- random diffusivity (5)
- random-walks (5)
- range shifts (5)
- rare earth elements (5)
- reading comprehension (5)
- real-time rendering (5)
- record (5)
- reflexives (5)
- regional development (5)
- reionization (5)
- rejection sensitivity (5)
- relational aggression (5)
- relativistic jets (5)
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- resonance energy transfer (5)
- resource competition (5)
- rhythmic grouping (5)
- rice (5)
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- risk-factors (5)
- rotifers (5)
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- salicylic acid (5)
- salt stress (5)
- savanna (5)
- scaling (5)
- scenario (5)
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- school shooting (5)
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- selectivity (5)
- self-employment (5)
- self-evaluation (5)
- semi-arid (5)
- semi-parliamentary government (5)
- sentence production (5)
- sentiment analysis (5)
- service-oriented systems engineering (5)
- shape-memory polymers (5)
- shotgun sequencing (5)
- silica (5)
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- sol-gel (5)
- spatial autocorrelation (5)
- spatial cognition (5)
- spatial-distribution (5)
- species coexistence (5)
- species distribution models (5)
- speech motor control (5)
- sphingosine-1-phosphate (5)
- sport-specific performance (5)
- standards (5)
- starch phosphorylation (5)
- stars: chemically peculiar (5)
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- state (5)
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- tiefes Lernen (5)
- top-down control (5)
- tourism (5)
- trajectories (5)
- transcriptome (5)
- trend analysis (5)
- tunneling (5)
- tyramine (5)
- ultraviolet: ISM (5)
- uncertainties (5)
- uncertainty quantification (5)
- upconversion (5)
- urban (5)
- usability (5)
- validation study (5)
- vegetation change (5)
- victim blame (5)
- virus (5)
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- 1814-1831 (4)
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- 4 (4)
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- Fredholm complexes (4)
- Friedrich Wilhelm III. (4)
- Functional diversity (4)
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- GC-MS (4)
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- Galaxy: structure (4)
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- ISM: molecules (4)
- IT-Infrastruktur (4)
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- India-Asia collision (4)
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- Johann Gottfried Herder (4)
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- Quantenpunkte (4)
- Quantitative Trait Locus (4)
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- RAFT-Polymerisation (4)
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- Turkish-German bilingualism (4)
- Typ-2-Diabetes (4)
- Typologie (4)
- Tyramin (4)
- UAV (4)
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- process (4)
- properties (4)
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- redox (4)
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- relatedness (4)
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- replication (4)
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- salt (4)
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- smartphone (4)
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- sport (4)
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- victim (4)
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- 1800 (3)
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- 4-nitrophenol (3)
- 5-methoxycarbonylmethyl-2-thiouridine (3)
- ABCB7 (3)
- AGN (3)
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- Abandonment (3)
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- Affekt (3)
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- Age (3)
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- Agreement (3)
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- Aleatory variability (3)
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- Analyse (3)
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- Azobenzen (3)
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- BIAT (3)
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- BL Lacertae objects: individual: Mrk 421 (3)
- BL Lacertae objects: individual: PKS 2155-304 (3)
- BRD (3)
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- type 2 (3)
- type specimens (3)
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Institute
- Institut für Biochemie und Biologie (5417)
- Institut für Physik und Astronomie (5307)
- Institut für Geowissenschaften (3622)
- Institut für Chemie (3403)
- Wirtschaftswissenschaften (2488)
- Department Psychologie (2219)
- Historisches Institut (2078)
- Sozialwissenschaften (1838)
- Institut für Mathematik (1816)
- Institut für Romanistik (1762)
Vom 18. bis 20. September 2014 versammelten sich an der Universität Potsdam kultur- und filmwissenschaftlich arbeitende Wissenschaftler zu einem Andrej Tarkovskij gewidmeten Symposium, dem ersten internationalen. Die 25 Teilnehmer kamen nämlich aus neun Ländern. Dadurch, dass nicht wenige auch eine – wie man heute sagt – „Migrationsbiographie“ haben, potenzierte sich die durch die jeweils unterschiedliche Herkunft bedingte Multiperspektivik, zu der jedoch der Modus der Wissenschaftlichkeit ein deutlich relativierendes Korrektiv bildet. Der vorliegende Band enthält im Wesentlichen die dort vorgestellten Beiträge, aber auch die der Fachleute, die nicht persönlich hatten nach Potsdam kommen können.
Research on novel and advanced biomaterials is an indispensable step towards their applications in desirable fields such as tissue engineering, regenerative medicine, cell culture, or biotechnology. The work presented here focuses on such a promising material: polyelectrolyte multilayer (PEM) composed of hyaluronic acid (HA) and poly(L-lysine) (PLL). This gel-like polymer surface coating is able to accumulate (bio-)molecules such as proteins or drugs and release them in a controlled manner. It serves as a mimic of the extracellular matrix (ECM) in composition and intrinsic properties. These qualities make the HA/PLL multilayers a promising candidate for multiple bio-applications such as those mentioned above. The work presented aims at the development of a straightforward approach for assessment of multi-fractional diffusion in multilayers (first part) and at control of local molecular transport into or from the multilayers by laser light trigger (second part).
The mechanism of the loading and release is governed by the interaction of bioactives with the multilayer constituents and by the diffusion phenomenon overall. The diffusion of a molecule in HA/PLL multilayers shows multiple fractions of different diffusion rate. Approaches, that are able to assess the mobility of molecules in such a complex system, are limited. This shortcoming motivated the design of a novel evaluation tool presented here.
The tool employs a simulation-based approach for evaluation of the data acquired by fluorescence recovery after photobleaching (FRAP) method. In this approach, possible fluorescence recovery scenarios are primarily simulated and afterwards compared with the data acquired while optimizing parameters of a model until a sufficient match is achieved. Fluorescent latex particles of different sizes and fluorescein in an aqueous medium are utilized as test samples validating the analysis results. The diffusion of protein cytochrome c in HA/PLL multilayers is evaluated as well.
This tool significantly broadens the possibilities of analysis of spatiotemporal FRAP data, which originate from multi-fractional diffusion, while striving to be widely applicable. This tool has the potential to elucidate the mechanisms of molecular transport and empower rational engineering of the drug release systems.
The second part of the work focuses on the fabrication of such a spatiotemporarily-controlled drug release system employing the HA/PLL multilayer. This release system comprises different layers of various functionalities that together form a sandwich structure. The bottom layer, which serves as a reservoir, is formed by HA/PLL PEM deposited on a planar glass substrate. On top of the PEM, a layer of so-called hybrids is deposited. The hybrids consist of thermoresponsive poly(N-isopropylacrylamide) (PNIPAM) -based hydrogel microparticles with surface-attached gold nanorods. The layer of hybrids is intended to serve as a gate that controls the local molecular transport through the PEM–solution-interface. The possibility of stimulating the molecular transport by near-infrared (NIR) laser irradiation is being explored.
From several tested approaches for the deposition of hybrids onto the PEM surface, the drying-based approach was identified as optimal. Experiments, that examine the functionality of the fabricated sandwich at elevated temperature, document the reversible volume phase transition of the PEM-attached hybrids while sustaining the sandwich stability. Further, the gold nanorods were shown to effectively absorb light radiation in the tissue- and cell-friendly NIR spectral region while transducing the energy of light into heat. The rapid and reversible shrinkage of the PEM-attached hybrids was thereby achieved. Finally, dextran was employed as a model transport molecule. It loads into the PEM reservoir in a few seconds with the partition constant of 2.4, while it spontaneously releases in a slower, sustained manner. The local laser irradiation of the sandwich, which contains the fluorescein isothiocyanate tagged dextran, leads to a gradual reduction of fluorescence intensity in the irradiated region.
The release system fabricated employs renowned photoresponsivity of the hybrids in an innovative setting. The results of the research are a step towards a spatially-controlled on-demand drug release system that paves the way to spatiotemporally controlled drug release.
The approaches developed in this work have the potential to elucidate the molecular dynamics in ECM and to foster engineering of multilayers with properties tuned to mimic the ECM. The work aims at spatiotemporal control over the diffusion of bioactives and their presentation to the cells.
The large literature that aims to find evidence of climate migration delivers mixed findings. This meta-regression analysis i) summarizes direct links between adverse climatic events and migration, ii) maps patterns of climate migration, and iii) explains the variation in outcomes. Using a set of limited dependent variable models, we meta-analyze thus-far the most comprehensive sample of 3,625 estimates from 116 original studies and produce novel insights on climate migration. We find that extremely high temperatures and drying conditions increase migration. We do not find a significant effect of sudden-onset events. Climate migration is most likely to emerge due to contemporaneous events, to originate in rural areas and to take place in middle-income countries, internally, to cities. The likelihood to become trapped in affected areas is higher for women and in low-income countries, particularly in Africa. We uniquely quantify how pitfalls typical for the broader empirical climate impact literature affect climate migration findings. We also find evidence of different publication biases.
In this paper, we move from the large strand of research that looks at evidence of climate migration to the questions: who are the climate migrants? and where do they go? These questions are crucial to design policies that mitigate welfare losses of migration choices due to climate change. We study the direct and heterogeneous associations between weather extremes and migration in rural India. We combine ERAS reanalysis data with the India Human Development Survey household panel and conduct regression analyses by applying linear probability and multinomial logit models. This enables us to establish a causal relationship between temperature and precipitation anomalies and overall migration as well as migration by destination. We show that adverse weather shocks decrease rural-rural and international migration and push people into cities in different, presumably more prosperous states. A series of positive weather shocks, however, facilitates international migration and migration to cities within the same state. Further, our results indicate that in contrast to other migrants, climate migrants are likely to be from the lower end of the skill distribution and from households strongly dependent on agricultural production. We estimate that approximately 8% of all rural-urban moves between 2005 and 2012 can be attributed to weather. This figure might increase as a consequence of climate change. Thus, a key policy recommendation is to take steps to facilitate integration of less educated migrants into the urban labor market.
While estimated numbers of past and future climate migrants are alarming, the growing empirical evidence suggests that the association between adverse climate-related events and migration is not universally positive. This dissertation seeks to advance our understanding of when and how climate migration emerges by analyzing heterogeneous climatic influences on migration in low- and middle-income countries. To this end, it draws on established economic theories of migration, datasets from physical and social sciences, causal inference techniques and approaches from systematic literature review. In three of its five chapters, I estimate causal effects of processes of climate change on inequality and migration in India and Sub-Saharan Africa. By employing interaction terms and by analyzing sub-samples of data, I explore how these relationships differ for various segments of the population. In the remaining two chapters, I present two systematic literature reviews. First, I undertake a comprehensive meta-regression analysis of the econometric climate migration literature to summarize general climate migration patterns and explain the conflicting findings. Second, motivated by the broad range of approaches in the field, I examine the literature from a methodological perspective to provide best practice guidelines for studying climate migration empirically. Overall, the evidence from this dissertation shows that climatic influences on human migration are highly heterogeneous. Whether adverse climate-related impacts materialize in migration depends on the socio-economic characteristics of the individual households, such as wealth, level of education, agricultural dependence or access to adaptation technologies and insurance. For instance, I show that while adverse climatic shocks are generally associated with an increase in migration in rural India, they reduce migration in the agricultural context of Sub-Saharan Africa, where the average wealth levels are much lower so that households largely cannot afford the upfront costs of moving. I find that unlike local climatic shocks which primarily enhance internal migration to cities and hence accelerate urbanization, shocks transmitted via agricultural producer prices increase migration to neighboring countries, likely due to the simultaneous decrease in real income in nearby urban areas. These findings advance our current understanding by showing when and how economic agents respond to climatic events, thus providing explicit contexts and mechanisms of climate change effects on migration in the future. The resulting collection of findings can guide policy interventions to avoid or mitigate any present and future welfare losses from climate change-related migration choices.
Ökonomen wie Wirtschaftspolitiker berufen sich auf die Neutralitätstheorie des Geldes, wenn sie eine Entpolitisierung der Geldpolitik fordern. Sowohl die Theorie der Geldneutralität als auch das Paradigma der Entpolitisierung der Geldpolitik sind jedoch problematisch. Die politökonomischen Entwicklungen nach der globalen Finanz- und Wirtschaftskrise 2007/2008 und die jüngsten Kontroversen über die Rolle und Bedeutung von Geld haben dies deutlich vor Augen geführt. Die vorliegende Arbeit diskutiert zunächst die konzeptionellen Grundlagen und theoretischen Modelle der Geldneutralität. Anschließend werden die zentralen theoretischen Annahmen und Aussagen der Neutralitätstheorie aus einer kritischen heterodoxen Perspektive hinterfragt. Es wird argumentiert, dass Geld eine nicht-neutrale Produktionskraft ist, die weder ökonomisch noch sozial neutral ist. Die Bedingungen, unter denen Geld verfügbar ist und zirkuliert, sind richtungsweisend für die ökonomische Entwicklung. Daher kann es auch kein neutrales Geld oder gar eine apolitische Geldpolitik geben.
Ökonomen wie Wirtschaftspolitiker berufen sich auf die Neutralitätstheorie des Geldes, wenn sie eine Entpolitisierung der Geldpolitik fordern. Sowohl die Theorie der Geldneutralität als auch das Paradigma der Entpolitisierung der Geldpolitik sind jedoch problematisch. Die politökonomischen Entwicklungen nach der globalen Finanz- und Wirtschaftskrise 2007/2008 und die jüngsten Kontroversen über die Rolle und Bedeutung von Geld haben dies deutlich vor Augen geführt. Die vorliegende Arbeit diskutiert zunächst die konzeptionellen Grundlagen und theoretischen Modelle der Geldneutralität. Anschließend werden die zentralen theoretischen Annahmen und Aussagen der Neutralitätstheorie aus einer kritischen heterodoxen Perspektive hinterfragt. Es wird argumentiert, dass Geld eine nicht-neutrale Produktionskraft ist, die weder ökonomisch noch sozial neutral ist. Die Bedingungen, unter denen Geld verfügbar ist und zirkuliert, sind richtungsweisend für die ökonomische Entwicklung. Daher kann es auch kein neutrales Geld oder gar eine apolitische Geldpolitik geben.
Die vorliegende Arbeit untersucht die Politik der Zentralbankunabhängigkeit (ZBU) am Beispiel der Türkei. Im Mittelpunkt der Arbeit stehen theoretische und empirische Fragen und Probleme, die sich im Zusammenhang mit der ZBU stellen und anhand der türkischen Geldpolitik diskutiert werden. Ein zentrales Ziel der Arbeit besteht darin, zu untersuchen, ob und inwiefern die türkische Zentralbank nach Erlangung der de jure institutionellen Unabhängigkeit tatsächlich als unabhängig und entpolitisiert eingestuft werden kann. Um diese Forschungsfrage zu beantworten, werden die institutionellen Bedingungen, die Ziele und die Regeln, nach denen sich die türkische Geldpolitik richtet, geklärt. Anschließend wird empirisch überprüft, ob die geldpolitische Praxis der CBRT sich an dem offiziell vorgegebenen Regelwerk orientiert. Die Hauptthese dieser Arbeit lautet, dass die formelle Unabhängigkeit der CBRT und die regelorientierte Geldpolitik nicht mit einer Entpolitisierung der Geldpolitik in der Türkei gleichzusetzen ist. Als Alternative schlägt die vorliegende Studie vor, den institutionellen Status der CBRT als einen der relativen Autonomie zu untersuchen. Auch eine de jure unabhängige Zentralbank kann sich nicht von politischen Eingriffen abkoppeln, wie das Fallbeispiel Türkei zeigen wird.
We show that the codifference is a useful tool in studying the ergodicity breaking and non-Gaussianity properties of stochastic time series. While the codifference is a measure of dependence that was previously studied mainly in the context of stable processes, we here extend its range of applicability to random-parameter and diffusing-diffusivity models which are important in contemporary physics, biology and financial engineering. We prove that the codifference detects forms of dependence and ergodicity breaking which are not visible from analysing the covariance and correlation functions. We also discuss a related measure of dispersion, which is a nonlinear analogue of the mean squared displacement.
Recent advances in single particle tracking and supercomputing techniques demonstrate the emergence of normal or anomalous, viscoelastic diffusion in conjunction with non-Gaussian distributions in soft, biological, and active matter systems. We here formulate a stochastic model based on a generalised Langevin equation in which non-Gaussian shapes of the probability density function and normal or anomalous diffusion have a common origin, namely a random parametrisation of the stochastic force. We perform a detailed analysis demonstrating how various types of parameter distributions for the memory kernel result in exponential, power law, or power-log law tails of the memory functions. The studied system is also shown to exhibit a further unusual property: the velocity has a Gaussian one point probability density but non-Gaussian joint distributions. This behaviour is reflected in the relaxation from a Gaussian to a non-Gaussian distribution observed for the position variable. We show that our theoretical results are in excellent agreement with stochastic simulations.
Recent advances in single particle tracking and supercomputing techniques demonstrate the emergence of normal or anomalous, viscoelastic diffusion in conjunction with non-Gaussian distributions in soft, biological, and active matter systems. We here formulate a stochastic model based on a generalised Langevin equation in which non-Gaussian shapes of the probability density function and normal or anomalous diffusion have a common origin, namely a random parametrisation of the stochastic force. We perform a detailed analysis demonstrating how various types of parameter distributions for the memory kernel result in exponential, power law, or power-log law tails of the memory functions. The studied system is also shown to exhibit a further unusual property: the velocity has a Gaussian one point probability density but non-Gaussian joint distributions. This behaviour is reflected in the relaxation from a Gaussian to a non-Gaussian distribution observed for the position variable. We show that our theoretical results are in excellent agreement with stochastic simulations.
We show that the codifference is a useful tool in studying the ergodicity breaking and non-Gaussianity properties of stochastic time series. While the codifference is a measure of dependence that was previously studied mainly in the context of stable processes, we here extend its range of applicability to random-parameter and diffusing-diffusivity models which are important in contemporary physics, biology and financial engineering. We prove that the codifference detects forms of dependence and ergodicity breaking which are not visible from analysing the covariance and correlation functions. We also discuss a related measure of dispersion, which is a nonlinear analogue of the mean squared displacement.
Many studies on biological and soft matter systems report the joint presence of a linear mean-squared displacement and a non-Gaussian probability density exhibiting, for instance, exponential or stretched-Gaussian tails. This phenomenon is ascribed to the heterogeneity of the medium and is captured by random parameter models such as ‘superstatistics’ or ‘diffusing diffusivity’. Independently, scientists working in the area of time series analysis and statistics have studied a class of discrete-time processes with similar properties, namely, random coefficient autoregressive models. In this work we try to reconcile these two approaches and thus provide a bridge between physical stochastic processes and autoregressive models.Westart from the basic Langevin equation of motion with time-varying damping or diffusion coefficients and establish the link to random coefficient autoregressive processes. By exploring that link we gain access to efficient statistical methods which can help to identify data exhibiting Brownian yet non-Gaussian diffusion.
Many studies on biological and soft matter systems report the joint presence of a linear mean-squared displacement and a non-Gaussian probability density exhibiting, for instance, exponential or stretched-Gaussian tails. This phenomenon is ascribed to the heterogeneity of the medium and is captured by random parameter models such as ‘superstatistics’ or ‘diffusing diffusivity’. Independently, scientists working in the area of time series analysis and statistics have studied a class of discrete-time processes with similar properties, namely, random coefficient autoregressive models. In this work we try to reconcile these two approaches and thus provide a bridge between physical stochastic processes and autoregressive models.Westart from the basic Langevin equation of motion with time-varying damping or diffusion coefficients and establish the link to random coefficient autoregressive processes. By exploring that link we gain access to efficient statistical methods which can help to identify data exhibiting Brownian yet non-Gaussian diffusion.
Background:
Plant phenotypic data shrouds a wealth of information which, when accurately analysed and linked
to other data types, brings to light the knowledge about the mechanisms of life. As phenotyping is a field of research
comprising manifold, diverse and time
‑consuming experiments, the findings can be fostered by reusing and combin‑
ing existing datasets. Their correct interpretation, and thus replicability, comparability and interoperability, is possible
provided that the collected observations are equipped with an adequate set of metadata. So far there have been no
common standards governing phenotypic data description, which hampered data exchange and reuse.
Results:
In this paper we propose the guidelines for proper handling of the information about plant phenotyping
experiments, in terms of both the recommended content of the description and its formatting. We provide a docu‑
ment called “Minimum Information About a Plant Phenotyping Experiment”, which specifies what information about
each experiment should be given, and a Phenotyping Configuration for the ISA
‑Tab format, which allows to practically
organise this information within a dataset. We provide examples of ISA
‑Tab
‑formatted phenotypic data, and a general
description of a few systems where the recommendations have been implemented.
Conclusions:
Acceptance of the rules described in this paper by the plant phenotyping community will help to
achieve findable, accessible, interoperable and reusable data.
The Proteasome Acts as a Hub for Plant Immunity and Is Targeted by Pseudomonas Type III Effectors
(2016)
Recent evidence suggests that the ubiquitin-proteasome system is involved in several aspects of plant immunity and that a range of plant pathogens subvert the ubiquitin-proteasome system to enhance their virulence. Here, we show that proteasome activity is strongly induced during basal defense in Arabidopsis (Arabidopsis thaliana). Mutant lines of the proteasome subunits RPT2a and RPN12a support increased bacterial growth of virulent Pseudomonas syringae pv tomato DC3000 (Pst) and Pseudomonas syringae pv maculicola ES4326. Both proteasome subunits are required for pathogen-associated molecular pattern-triggered immunity responses. Analysis of bacterial growth after a secondary infection of systemic leaves revealed that the establishment of systemic acquired resistance (SAR) is impaired in proteasome mutants, suggesting that the proteasome also plays an important role in defense priming and SAR. In addition, we show that Pst inhibits proteasome activity in a type III secretion-dependent manner. A screen for type III effector proteins from Pst for their ability to interfere with proteasome activity revealed HopM1, HopAO1, HopA1, and HopG1 as putative proteasome inhibitors. Biochemical characterization of HopM1 by mass spectrometry indicates that HopM1 interacts with several E3 ubiquitin ligases and proteasome subunits. This supports the hypothesis that HopM1 associates with the proteasome, leading to its inhibition. Thus, the proteasome is an essential component of pathogen-associated molecular pattern-triggered immunity and SAR, which is targeted by multiple bacterial effectors.
XopJ is a Xanthomonas type III effector protein that promotes bacterial virulence on susceptible pepper plants through the inhibition of the host cell proteasome and a resultant suppression of salicylic acid (SA) - dependent defense responses. We show here that Nicotiana benthamiana leaves transiently expressing XopJ display hypersensitive response (HR) -like symptoms when exogenously treated with SA. This apparent avirulence function of XopJ was further dependent on effector myristoylation as well as on an intact catalytic triad, suggesting a requirement of its enzymatic activity for HR-like symptom elicitation. The ability of XopJ to cause a HR-like symptom development upon SA treatment was lost upon silencing of SGT1 and NDR1, respectively, but was independent of EDS1 silencing, suggesting that XopJ is recognized by an R protein of the CC-NBS-LRR class. Furthermore, silencing of NPR1 abolished the elicitation of HR-like symptoms in XopJ expressing leaves after SA application. Measurement of the proteasome activity indicated that proteasome inhibition by XopJ was alleviated in the presence of SA, an effect that was not observed in NPR1 silenced plants. Our results suggest that XopJ - triggered HR-like symptoms are closely related to the virulence function of the effector and that XopJ follows a two-signal model in order to elicit a response in the non-host plant N. benthamiana.
XopJ is a Xanthomonas type III effector protein that promotes bacterial virulence on susceptible pepper plants through the inhibition of the host cell proteasome and a resultant suppression of salicylic acid (SA) - dependent defense responses. We show here that Nicotiana benthamiana leaves transiently expressing XopJ display hypersensitive response (HR) -like symptoms when exogenously treated with SA. This apparent avirulence function of XopJ was further dependent on effector myristoylation as well as on an intact catalytic triad, suggesting a requirement of its enzymatic activity for HR-like symptom elicitation. The ability of XopJ to cause a HR-like symptom development upon SA treatment was lost upon silencing of SGT1 and NDR1, respectively, but was independent of EDS1 silencing, suggesting that XopJ is recognized by an R protein of the CC-NBS-LRR class. Furthermore, silencing of NPR1 abolished the elicitation of HR-like symptoms in XopJ expressing leaves after SA application. Measurement of the proteasome activity indicated that proteasome inhibition by XopJ was alleviated in the presence of SA, an effect that was not observed in NPR1 silenced plants. Our results suggest that XopJ - triggered HR-like symptoms are closely related to the virulence function of the effector and that XopJ follows a two-signal model in order to elicit a response in the non-host plant N. benthamiana.
Quantitative estimates of sea-level rise in the Mediterranean Basin become increasingly accurate thanks to detailed satellite monitoring. However, such measuring campaigns cover several years to decades, while longer-term sea-level records are rare for the Mediterranean. We used a data archeological approach to reanalyze monthly mean sea-level data of the Antalya-I (1935–1977) tide gauge to fill this gap. We checked the accuracy and reliability of these data before merging them with the more recent records of the Antalya-II (1985–2009) tide gauge, accounting for an eight-year hiatus. We obtain a composite time series of monthly and annual mean sea levels spanning some 75 years, providing the longest record for the eastern Mediterranean Basin, and thus an essential tool for studying the region's recent sea-level trends. We estimate a relative mean sea-level rise of 2.2 ± 0.5 mm/year between 1935 and 2008, with an annual variability (expressed here as the standard deviation of the residuals, σresiduals = 41.4 mm) above that at the closest tide gauges (e.g., Thessaloniki, Greece, σresiduals = 29.0 mm). Relative sea-level rise accelerated to 6.0 ± 1.5 mm/year at Antalya-II; we attribute roughly half of this rate (~3.6 mm/year) to tectonic crustal motion and anthropogenic land subsidence. Our study highlights the value of data archeology for recovering and integrating historic tide gauge data for long-term sea-level and climate studies.
Landslides are frequent natural hazards in rugged terrain, when the resisting frictional force of the surface of rupture yields to the gravitational force. These forces are functions of geological and morphological factors, such as angle of internal friction, local slope gradient or curvature, which remain static over hundreds of years; whereas more dynamic triggering events, such as rainfall and earthquakes, compromise the force balance by temporarily reducing resisting forces or adding transient loads. This thesis investigates landslide distribution and orientation due to landslide triggers (e.g. rainfall) at different scales (6-4∙10^5 km^2) and aims to link rainfall movement with the landslide distribution. It additionally explores the local impacts of the extreme rainstorms on landsliding and the role of precursory stability conditions that could be induced by an earlier trigger, such as an earthquake.
Extreme rainfall is a common landslide trigger. Although several studies assessed rainfall intensity and duration to study the distribution of thus triggered landslides, only a few case studies quantified spatial rainfall patterns (i.e. orographic effect). Quantifying the regional trajectories of extreme rainfall could aid predicting landslide prone regions in Japan. To this end, I combined a non-linear correlation metric, namely event synchronization, and radial statistics to assess the general pattern of extreme rainfall tracks over distances of hundreds of kilometers using satellite based rainfall estimates. Results showed that, although the increase in rainfall intensity and duration positively correlates with landslide occurrence, the trajectories of typhoons and frontal storms were insufficient to explain landslide distribution in Japan. Extreme rainfall trajectories inclined northwestwards and were concentrated along some certain locations, such as coastlines of southern Japan, which was unnoticed in the landslide distribution of about 5000 rainfall-triggered landslides. These landslides seemed to respond to the mean annual rainfall rates.
Above mentioned findings suggest further investigation on a more local scale to better understand the mechanistic response of landscape to extreme rainfall in terms of landslides. On May 2016 intense rainfall struck southern Germany triggering high waters and landslides. The highest damage was reported at the Braunsbach, which is located on the tributary-mouth fan formed by the Orlacher Bach. Orlacher Bach is a ~3 km long creek that drains a catchment of about ~6 km^2. I visited this catchment in June 2016 and mapped 48 landslides along the creek. Such high landslide activity was not reported in the nearby catchments within ~3300 km^2, despite similar rainfall intensity and duration based on weather radar estimates. My hypothesis was that several landslides were triggered by rainfall-triggered flash floods that undercut hillslope toes along the Orlacher Bach. I found that morphometric features such as slope and curvature play an important role in landslide distribution on this micro scale study site (<10 km^2). In addition, the high number of landslides along the Orlacher Bach could also be boosted by accumulated damages on hillslopes due karst weathering over longer time scales.
Precursory damages on hillslopes could also be induced by past triggering events that effect landscape evolution, but this interaction is hard to assess independently from the latest trigger. For example, an earthquake might influence the evolution of a landscape decades long, besides its direct impacts, such as landslides that follow the earthquake. Here I studied the consequences of the 2016 Kumamoto Earthquake (MW 7.1) that triggered some 1500 landslides in an area of ~4000 km^2 in central Kyushu, Japan. Topography, i.e. local slope and curvature, both amplified and attenuated seismic waves, thus controlling the failure mechanism of those landslides (e.g. progressive). I found that topography fails in explaining the distribution and the preferred orientation of the landslides after the earthquake; instead the landslides were concentrated around the northeast of the rupture area and faced mostly normal to the rupture plane. This preferred location of the landslides was dominated mainly by the directivity effect of the strike-slip earthquake, which is the propagation of wave energy along the fault in the rupture direction; whereas amplitude variations of the seismic radiation altered the preferred orientation. I suspect that the earthquake directivity and the asymmetry of seismic radiation damaged hillslopes at those preferred locations increasing landslide susceptibility. Hence a future weak triggering event, e.g. scattered rainfall, could further trigger landslides at those damaged hillslopes.
Reading requires the assembly of cognitive processes across a wide spectrum from low-level visual perception to high-level discourse comprehension. One approach of unravelling the dynamics associated with these processes is to determine how eye movements are influenced by the characteristics of the text, in particular which features of the words within the perceptual span maximise the information intake due to foveal, spillover, parafoveal, and predictive processing. One way to test the generalisability of current proposals of such distributed processing is to examine them across different languages. For Turkish, an agglutinative language with a shallow orthography-phonology mapping, we replicate the well-known canonical main effects of frequency and predictability of the fixated word as well as effects of incoming saccade amplitude and fixation location within the word on single-fixation durations with data from 35 adults reading 120 nine-word sentences. Evidence for previously reported effects of the characteristics of neighbouring words and interactions was mixed. There was no evidence for the expected Turkish-specific morphological effect of the number of inflectional suffixes on single-fixation durations. To control for word-selection bias associated with single-fixation durations, we also tested effects on word skipping, single-fixation, and multiple-fixation cases with a base-line category logit model, assuming an increase of difficulty for an increase in the number of fixations. With this model, significant effects of word characteristics and number of inflectional suffixes of foveal word on probabilities of the number of fixations were observed, while the effects of the characteristics of neighbouring words and interactions were mixed.
Because of political conflicts and climate change, migration will be increased worldwide and integration in host societies is a challenge also for migrants. We hypothesize that migrants, who take up the challenge in a new social environment are taller than migrants who do not pose this challenge. We analyze by a questionnaire possible social, nutritional and ethnic influencing factors to body height (BH) of adult offspring of Turkish migrants (n = 82, 39 males) aged from 18 to 34 years (mean age 24.6 years). The results of multiple regression (downward selection) show that the more a male adult offspring of Turkish migrants feels like belonging to the Turkish culture, the smaller he is (95% CI, -3.79, -0.323). Further, the more a male adult offspring of Turkish migrants feels like belonging to the German culture, the taller he is (95% CI, -0.152, 1.738). We discussed it comparable to primates taking up their challenge in dominance, where as a result their body size increase is associated with higher IGF-1 level. IGF-1 is associated with emotional belonging and has a fundamental role in the regulation of metabolism and growth of the human body. With all pilot characteristics of our study results show that the successful challenge of integration in a new society is strongly associated with the emotional integration and identification in the sense of a personal sense of belonging to society. We discuss taller BH as a signal of social growth adjustment. In this sense, a secular trend of BH adaptation of migrants to hosts is a sign of integration.
In this study, the spatial and temporal impacts of the Ataturk Dam on agro-meteorological aspects of the Southeastern Anatolia region have been investigated. Change detection and environmental impacts due to water-reserve changes in Ataturk Dam Lake have been determined and evaluated using multi-temporal Landsat satellite imageries and meteorological datasets within a period of 1984-2011. These time series have been evaluated for three time periods. Dam construction period constitutes the first part of the study. Land cover/use changes especially on agricultural fields under the Ataturk Dam Lake and its vicinity have been identified between the periods of 1984-1992. The second period comprises the 10-year period after the completion of filling up the reservoir in 1992. At this period, Landsat and meteorological time-series analyses are examined to assess the impact of the Ataturk Dam Lake on selected irrigated agricultural areas. For the last 9-year period from 2002 to 2011, the relationships between seasonal water-reserve changes and irrigated plains under changing climatic factors primarily driving vegetation activity (monthly, seasonal, and annual fluctuations of rainfall rate, air temperature, humidity) on the watershed have been investigated using a 30-year meteorological time series. The results showed that approximately 368 km(2) of agricultural fields have been affected because of inundation due to the Ataturk Dam Lake. However, irrigated agricultural fields have been increased by 56.3% of the total area (1552 of 2756 km(2)) on Harran Plain within the period of 1984-2011.
Unser modernes Strafrechtsbild ist geprägt von dem Gedanken, dass das Strafrecht den Bürgern ein freies und friedliches Zusammenleben unter Gewährleistung aller verfassungsrechtlich garantierten Grundrechte sichert. Der Einsatz des Strafrechts bedarf der Legitimation und darf nicht aus moralischen Vorstellungen oder Gedanken abgeleitet werden. Strafbar kann es demnach nicht sein, wenn ein Rechtsgutsträger über ein ihm disponibles Rechtsgut frei verfügt. Oftmals stehen hierbei der strafrechtliche Lebensschutz und das Selbstbestimmungsrecht des Einzelnen in einem Spannungsverhältnis.
Die vorliegende Arbeit hat untersucht, wie sich dieses Spannungsverhältnis in der höchstrichterlichen Judikatur entwickelt hat und wie es nunmehr gelöst wird. Konkret stellt sich hierbei die Frage, wie es strafrechtlich bewertet wurde, wenn jemand einen Tötungserfolg mitverursacht hat, der zugleich auf einem freiverantwortlichen Willensentschluss des Opfers beruhte.
Mit der Liberalisierung des Strommarkts, den unsicheren Aussichten in der Klimapolitik und stark schwankenden Preisen bei Brennstoffen, Emissionsrechten und Kraftwerkskomponenten hat bei Kraftwerksinvestitionen das Risikomanagement an Bedeutung gewonnen. Dies äußert sich im vermehrten Einsatz probabilistischer Verfahren. Insbesondere bei regulativen Risiken liefert der klassische, häufigkeitsbasierte Wahrscheinlichkeitsbegriff aber keine Handhabe zur Risikoquantifizierung. In dieser Arbeit werden Kraftwerksinvestitionen und -portfolien in Deutschland mit Methoden des Bayes'schen Risikomanagements bewertet. Die Bayes'sche Denkschule begreift Wahrscheinlichkeit als persönliches Maß für Unsicherheit. Wahrscheinlichkeiten können auch ohne statistische Datenanalyse allein mit Expertenbefragungen gewonnen werden. Das Zusammenwirken unsicherer Werttreiber wurde mit einem probabilistischen DCF-Modell (Discounted Cash Flow-Modell) spezifiziert und in ein Einflussdiagramm mit etwa 1200 Objekten umgesetzt. Da der Überwälzungsgrad von Brennstoff- und CO2-Kosten und damit die Höhe der von den Kraftwerken erwirtschafteten Deckungsbeiträge im Wettbewerb bestimmt werden, reicht eine einzelwirtschaftliche Betrachtung der Kraftwerke nicht aus. Strompreise und Auslastungen werden mit Heuristiken anhand der individuellen Position der Kraftwerke in der Merit Order bestimmt, d.h. anhand der nach kurzfristigen Grenzkosten gestaffelten Einsatzreihenfolge. Dazu wurden 113 thermische Großkraftwerke aus Deutschland in einer Merit Order vereinigt. Das Modell liefert Wahrscheinlichkeitsverteilungen für zentrale Größen wie Kapitalwerte von Bestandsportfolien sowie Stromgestehungskosten und Kapitalwerte von Einzelinvestitionen (Steinkohle- und Braunkohlekraftwerke mit und ohne CO2-Abscheidung sowie GuD-Kraftwerke). Der Wert der Bestandsportfolien von RWE, E.ON, EnBW und Vattenfall wird primär durch die Beiträge der Braunkohle- und Atomkraftwerke bestimmt. Erstaunlicherweise schlägt sich der Emissionshandel nicht in Verlusten nieder. Dies liegt einerseits an den Zusatzgewinnen der Atomkraftwerke, andererseits an den bis 2012 gratis zugeteilten Emissionsrechten, welche hohe Windfall-Profite generieren. Dadurch erweist sich der Emissionshandel in seiner konkreten Ausgestaltung insgesamt als gewinnbringendes Geschäft. Über die Restlaufzeit der Bestandskraftwerke resultiert ab 2008 aus der Einführung des Emissionshandels ein Barwertvorteil von insgesamt 8,6 Mrd. €. In ähnlicher Dimension liegen die Barwertvorteile aus der 2009 von der Bundesregierung in Aussicht gestellten Laufzeitverlängerung für Atomkraftwerke. Bei einer achtjährigen Laufzeitverlängerung ergäben sich je nach CO2-Preisniveau Barwertvorteile von 8 bis 15 Mrd. €. Mit höheren CO2-Preisen und Laufzeitverlängerungen von bis zu 28 Jahren würden 25 Mrd. € oder mehr zusätzlich anfallen. Langfristig erscheint fraglich, ob unter dem gegenwärtigen Marktdesign noch Anreize für Investitionen in fossile Kraftwerke gegeben sind. Zu Beginn der NAP 2-Periode noch rentable Investitionen in Braunkohle- und GuD-Kraftwerke werden mit der auslaufenden Gratiszuteilung von Emissionsrechten zunehmend unrentabler. Die Rentabilität wird durch Strommarkteffekte der erneuerbaren Energien und ausscheidender alter Gas- und Ölkraftwerke stetig weiter untergraben. Steinkohlekraftwerke erweisen sich selbst mit anfänglicher Gratiszuteilung als riskante Investition. Die festgestellten Anreizprobleme für Neuinvestitionen sollten jedoch nicht dem Emissionshandel zugeschrieben werden, sondern resultieren aus den an Grenzkosten orientierten Strompreisen. Das Anreizproblem ist allerdings bei moderaten CO2-Preisen am größten. Es gilt auch für Kraftwerke mit CO2-Abscheidung: Obwohl die erwarteten Vermeidungskosten für CCS-Kraftwerke gegenüber konventionellen Kohlekraftwerken im Jahr 2025 auf 25 €/t CO2 (Braunkohle) bzw. 38,5 €/t CO2 (Steinkohle) geschätzt werden, wird ihr Bau erst ab CO2-Preisen von 50 bzw. 77 €/t CO2 rentabel. Ob und welche Kraftwerksinvestitionen sich langfristig rechnen, wird letztlich aber politisch entschieden und ist selbst unter stark idealisierten Bedingungen kaum vorhersagbar.
We present the fabrication of TiO2 nanotube electrodes with high biocompatibility and extraordinary spectroscopic properties. Intense surface-enhanced resonance Raman signals of the heme unit of the redox enzyme Cytochromeb(5) were observed upon covalent immobilization of the protein matrix on the TiO2 surface, revealing overall preserved structural integrity and redox behavior. The enhancement factor could be rationally controlled by varying the electrode annealing temperature, reaching a record maximum value of over 70 at 475 degrees C. For the first time, such high values are reported for non-directly surface-interacting probes, for which the involvement of charge-transfer processes in signal amplification can be excluded. The origin of the surface enhancement is exclusively attributed to enhanced localized electric fields resulting from the specific optical properties of the nanotubular geometry of the electrode.
The Sun is a star, which due to its proximity has a tremendous influence on Earth. Since its very first days mankind tried to "understand the Sun", and especially in the 20th century science has uncovered many of the Sun's secrets by using high resolution observations and describing the Sun by means of models. As an active star the Sun's activity, as expressed in its magnetic cycle, is closely related to the sunspot numbers. Flares play a special role, because they release large energies on very short time scales. They are correlated with enhanced electromagnetic emissions all over the spectrum. Furthermore, flares are sources of energetic particles. Hard X-ray observations (e.g., by NASA's RHESSI spacecraft) reveal that a large fraction of the energy released during a flare is transferred into the kinetic energy of electrons. However the mechanism that accelerates a large number of electrons to high energies (beyond 20 keV) within fractions of a second is not understood yet. The thesis at hand presents a model for the generation of energetic electrons during flares that explains the electron acceleration based on real parameters obtained by real ground and space based observations. According to this model photospheric plasma flows build up electric potentials in the active regions in the photosphere. Usually these electric potentials are associated with electric currents closed within the photosphere. However as a result of magnetic reconnection, a magnetic connection between the regions of different magnetic polarity on the photosphere can establish through the corona. Due to the significantly higher electric conductivity in the corona, the photospheric electric power supply can be closed via the corona. Subsequently a high electric current is formed, which leads to the generation of hard X-ray radiation in the dense chromosphere. The previously described idea is modelled and investigated by means of electric circuits. For this the microscopic plasma parameters, the magnetic field geometry and hard X-ray observations are used to obtain parameters for modelling macroscopic electric components, such as electric resistors, which are connected with each other. This model demonstrates that such a coronal electric current is correlated with large scale electric fields, which can accelerate the electrons quickly up to relativistic energies. The results of these calculations are encouraging. The electron fluxes predicted by the model are in agreement with the electron fluxes deduced from the measured photon fluxes. Additionally the model developed in this thesis proposes a new way to understand the observed double footpoint hard X-ray sources.
We develop a method of finding analytical sotutions of the Bogolyubov-de Gennes equations for the excitations of a Bose condensate in the Thomas-Fermi regime in harmonic traps of any asymmetry and introduce a classification of eigenstates. In the case of cylindrical symmetry we emphasize the presence of an accidental degeneracy in the excitation spectrum at certain values of the projection of orbital angular momentum on the symmetry axis and discuss possible consequences of the degeneracy in the context of new signatures of Bose- Einstein condensation
Heutzutage ist es üblich, die Ehre als einen obsoleten Begriff zu betrachten, der nur einem archaischen Denkmodell zuzuordnen ist und keine handlungsprägende Größe in der Gegenwartsgesellschaft darstellt. Die Ehrenmorde, die heute noch in unterschiedlichen Teilen der Welt verübt werden, scheinen diese Behauptung zu bestätigen. In diesem Buch wird jedoch die These vertreten, dass nicht der Ehrbegriff, sondern seine Deutungen archaischer Natur und daher in Frage zu stellen sind. Die Ehre ist die Bezeichnung des sozialen Werts eines Menschen, den er infolge seiner achtenswerten Handlungen erlangt. Also kann sie kein Motiv für moralisch fragwürdige Praktiken bilden. Vor diesem Hintergrund werden die Formen und die Voraussetzungen der Ehre dargestellt, die sowohl in Bezug auf unsere Zeit anpassungsfähig als auch ethisch tragbar sind.
Next-generation sequencing methods provide comprehensive data for the analysis of structural and functional analysis of the genome. The draft genomes with low contig number and high N50 value can give insight into the structure of the genome as well as provide information on the annotation of the genome. In this study, we designed a pipeline that can be used to assemble prokaryotic draft genomes with low number of contigs and high N50 value. We aimed to use combination of two de novo assembly tools (SPAdes and IDBA-Hybrid) and evaluate the impact of this approach on the quality metrics of the assemblies. The followed pipeline was tested with the raw sequence data with short reads (< 300) for a total of 10 species from four different genera. To obtain the final draft genomes, we firstly assembled the sequences using SPAdes to find closely related organism using the extracted 16 s rRNA from it. IDBA-Hybrid assembler was used to obtain the second assembly data using the closely related organism genome. SPAdes assembler tool was implemented using the second assembly, produced by IDBA-hybrid as a hint. The results were evaluated using QUAST and BUSCO. The pipeline was successful for the reduction of the contig numbers and increasing the N50 statistical values in the draft genome assemblies while preserving the coverage of the draft genomes.
Literarische Grammatik
(2023)
Dieser Band versammelt neun Beiträge mit dem Ziel, Sprach- und Literaturwissenschaft aufeinander zu beziehen: Literatur grammatisch zu betrachten und Grammatik für Literatur (neu) zu denken. Jeder Beitrag nimmt mindestens einen grammatischen und einen literarischen Gegenstand zum Ausgangspunkt. Dabei ist die Bandbreite groß; sie reicht von Bodo Kirchhoffs Roman ‚Dämmer und Aufruhr‘ über die Kurzgeschichte ‚Das Brot‘ von Wolfgang Borchert bis hin zu Marion Poschmanns Gedichtzyklus ‚Kindergarten Lichtenberg‘ und deckt unterschiedlichste sprachliche Bereiche wie Tempus, semantische Rollen, Interpunktionszeichen oder Metaphern ab.
Ist es in der Schule geradezu erwünscht, Grammatik und Literatur integrativ zu unterrichten, verfolgen sie als universitäre Disziplinen oft ganz unterschiedliche Fragestellungen an verschiedenen Sprachwerken. Vor diesem Hintergrund ist dieser Band ein interdisziplinärer Versuch, Anregungen und neue Perspektiven für schulische wie universitäre Bildungskontexte zu geben.
Literarische Grammatik
(2023)
Dieser Band versammelt neun Beiträge mit dem Ziel, Sprach- und Literaturwissenschaft aufeinander zu beziehen: Literatur grammatisch zu betrachten und Grammatik für Literatur (neu) zu denken. Jeder Beitrag nimmt mindestens einen grammatischen und einen literarischen Gegenstand zum Ausgangspunkt. Dabei ist die Bandbreite groß; sie reicht von Bodo Kirchhoffs Roman ‚Dämmer und Aufruhr‘ über die Kurzgeschichte ‚Das Brot‘ von Wolfgang Borchert bis hin zu Marion Poschmanns Gedichtzyklus ‚Kindergarten Lichtenberg‘ und deckt unterschiedlichste sprachliche Bereiche wie Tempus, semantische Rollen, Interpunktionszeichen oder Metaphern ab.
Ist es in der Schule geradezu erwünscht, Grammatik und Literatur integrativ zu unterrichten, verfolgen sie als universitäre Disziplinen oft ganz unterschiedliche Fragestellungen an verschiedenen Sprachwerken. Vor diesem Hintergrund ist dieser Band ein interdisziplinärer Versuch, Anregungen und neue Perspektiven für schulische wie universitäre Bildungskontexte zu geben.
Measures for interoperability of phenotypic data: minimum information requirements and formatting
(2016)
Background: Plant phenotypic data shrouds a wealth of information which, when accurately analysed and linked to other data types, brings to light the knowledge about the mechanisms of life. As phenotyping is a field of research comprising manifold, diverse and time-consuming experiments, the findings can be fostered by reusing and combining existing datasets. Their correct interpretation, and thus replicability, comparability and interoperability, is possible provided that the collected observations are equipped with an adequate set of metadata. So far there have been no common standards governing phenotypic data description, which hampered data exchange and reuse. Results: In this paper we propose the guidelines for proper handling of the information about plant phenotyping experiments, in terms of both the recommended content of the description and its formatting. We provide a document called "Minimum Information About a Plant Phenotyping Experiment", which specifies what information about each experiment should be given, and a Phenotyping Configuration for the ISA-Tab format, which allows to practically organise this information within a dataset. We provide examples of ISA-Tab-formatted phenotypic data, and a general description of a few systems where the recommendations have been implemented. Conclusions: Acceptance of the rules described in this paper by the plant phenotyping community will help to achieve findable, accessible, interoperable and reusable data.
Migration and development in Senegal : a system dynamics analysis of the feedback relationships
(2011)
This thesis investigates the reciprocal relationship between migration and development in Senegal. Therewith, it contributes to the debate as to whether migration in developing countries enhances or rather impedes the development process. Even though extensive and controversial discussions can be found in the scientific literature regarding the impact of migration on development, research has scarcely examined the feedback relationships between migration and development. Science however agrees with both the fact that migration affects development as well as that the level of development in a country determines migration behaviour. Thus, both variables are neither dependent nor independent, but endogenous variables influencing each other and producing behavioural pattern that cannot be investigated using a static and unidirectional approach. On account of this, the thesis studies the feedback mechanisms existing between migration and development and the behavioural pattern generated by the high interdependence in order to be able to draw conclusions concerning the impact of changes in migration behaviour on the development process. To explore these research questions, the study applies the computer simulation method ‘System Dynamics’ and amplifies the simulation model for national development planning called ‘Threshold 21’ (T21), representing development processes endogenously and integrating economic, social and environmental aspects, using a structure that portrays the reasons and consequences of migration. The model has been customised to Senegal, being an appropriate representative of the theoretical interesting universe of cases. The comparison of the model generated scenarios - in which the intensity of emigration, the loss and gain of education, the remittances or the level of dependence changes - facilitates the analysis. The present study produces two important results. The first outcome is the development of an integrative framework representing migration and development in an endogenous way and incorporating several aspects of different theories. This model can be used as a starting point for further discussions and improvements and it is a fairly relevant and useful result against the background that migration is not integrated into most of the development planning tools despite its significant impact. The second outcome is the gained insights concerning the feedback relations between migration and development and the impact of changes in migration on development. To give two examples: It could be found that migration impacts development positively, indicated by HDI, but that the dominant behaviour of migration and development is a counteracting behaviour. That means that an increase in emigration leads to an improvement in development, while this in turn causes a decline in emigration, counterbalancing the initial increase. Another insight concerns the discovery that migration causes a decline in education in the short term, but leads to an increase in the long term, after approximately 25 years - a typical worse-before-better behaviour. From these and further observations, important policy implications can be derived for the sending and receiving countries. Hence, by overcoming the unidirectional perspective, this study contributes to an improved understanding of the highly complex relationship between migration and development and their feedback relations.
The pressure dependence of sheath gas assisted electrospray ionization (ESI) was investigated based on two complementary experimental setups, namely an ESI-ion mobility (IM) spectrometer and an ESI capillary - Faraday plate setup housed in an optically accessible vacuum chamber. The ESI-IM spectrometer is capable of working in the pressure range between 300 and 1000 mbar. Another aim was the assessment of the analytical capabilities of a subambient pressure ESI-IM spectrometer. The pressure dependence of ESI was characterized by imaging the electrospray and recording current-voltage (I-U) curves. Qualitatively different behavior was observed in both setups. While the current rises continuously with the voltage in the capillary-plate setup, a sharp increase of the current was measured in the IM spectrometer above a pressure-dependent threshold voltage. The different character can be attributed to the detection of different species in both experiments. In the capillary-plate experiment, a multitude of charged species are detected while only desolvated ions attribute to the IM spectrometer signal. This finding demonstrates the utility of IM spectrometry for the characterization of ESI, since in contrast to the capillary-plate setup, the release of ions from the electrospray droplets can be observed. The I-U curves change significantly with pressure. An important result is the reduction of the maximum current with decreasing pressure. The connected loss of ionization efficiency can be compensated by a more efficient transfer of ions in the IM spectrometer at increased E/N. Thus, similar limits of detection could be obtained at 500 mbar and 1 bar.
The capability of electrospray ionization (ESI)-ion mobility (IM) spectrometry for reaction monitoring is assessed both as a stand-alone real-time technique and in combination with HPLC. A three-step chemical reaction, consisting of a Williamson ether synthesis followed by a hydrogenation and an N-alkylation step, is chosen for demonstration. Intermediates and products are determined with a drift time to mass-per-charge correlation. Addition of an HPLC column to the setup increases the separation power and allows the determination of further species. Monitoring of the intensities of the various species over the reaction time allows the detection of the end of reaction, determination of the rate-limiting step, observation of the system response in discontinuous processes, and optimization of the mass ratios of the starting materials. However, charge competition in ESI influences the quantitative detection of substances in the reaction mixture. Therefore, two different methods are investigated, which allow the quantification and investigation of reaction kinetics. The first method is based on the pre-separation of the compounds on an HPLC column and their subsequent individual detection in the ESI-IM spectrometer. The second method involves an extended calibration procedure, which considers charge competition effects and facilitates nearly real-time quantification.
The application of electrospray ionization (ESI) ion mobility (IM) spectrometry on the detection end of a high-performance liquid chromatograph has been a subject of study for some time. So far, this method has been limited to low flow rates or has required splitting of the liquid flow. This work presents a novel concept of an ESI source facilitating the stable operation of the spectrometer at flow rates between 10 mu L min(-1) and 1500 mu L min(-1) without flow splitting, advancing the T-cylinder design developed by Kurnin and co-workers. Flow rates eight times faster than previously reported were achieved because of a more efficient dispersion of the liquid at increased electrospray voltages combined with nebulization by a sheath gas. Imaging revealed the spray operation to be in a rotationally symmetric multijet-mode. The novel ESI-IM spectrometer tolerates high water contents (<= 90%) and electrolyte concentrations up to 10 mM, meeting another condition required of high-performance liquid chromatography (HPLC) detectors. Limits of detection of 50 nM for promazine in the positive mode and 1 mu M for 1,3-dinitrobenzene in the negative mode were established. Three mixtures of reduced complexity (five surfactants, four neuroleptics, and two isomers) were separated in the millisecond regime in stand-alone operation of the spectrometer. Separations of two more complex mixtures (five neuroleptics and 13 pesticides) demonstrate the application of the spectrometer as an HPLC detector. The examples illustrate the advantages of the spectrometer over the established diode array detector, in terms of additional IM separation of substances not fully separated in the retention time domain as well as identification of substances based on their characteristic IMs.
The combination of high-performance liquid chromatography and electrospray ionization ion mobility spectrometry facilitates the two-dimensional separation of complex mixtures in the retention and drift time plane. The ion mobility spectrometer presented here was optimized for flow rates customarily used in high-performance liquid chromatography between 100 and 1500 mu L/min. The characterization of the system with respect to such parameters as the peak capacity of each time dimension and of the 2D spectrum was carried out based on a separation of a pesticide mixture containing 24 substances. While the total ion current chromatogram is coarsely resolved, exhibiting coelutions for a number of compounds, all substances can be separately detected in the 2D plane due to the orthogonality of the separations in retention and drift dimensions. Another major advantage of the ion mobility detector is the identification of substances based on their characteristic mobilities. Electrospray ionization allows the detection of substances lacking a chromophore. As an example, the separation of a mixture of 18 amino acids is presented. A software built upon the free mass spectrometry package OpenMS was developed for processing the extensive 2D data. The different processing steps are implemented as separate modules which can be arranged in a graphic workflow facilitating automated processing of data.
The increasing development of antibiotic resistance in bacteria has been a major problem for years, both in human and veterinary medicine. Prophylactic measures, such as the use of vaccines, are of great importance in reducing the use of antibiotics in livestock. These vaccines are mainly produced based on formaldehyde inactivation. However, the latter damages the recognition elements of the bacterial proteins and thus could reduce the immune response in the animal. An alternative inactivation method developed in this work is based on gentle photodynamic inactivation using carbon nanodots (CNDs) at excitation wavelengths λex > 290 nm. The photodynamic inactivation was characterized on the nonvirulent laboratory strain Escherichia coli K12 using synthesized CNDs. For a gentle inactivation, the CNDs must be absorbed into the cytoplasm of the E. coli cell. Thus, the inactivation through photoinduced formation of reactive oxygen species only takes place inside the bacterium, which means that the outer membrane is neither damaged nor altered. The loading of the CNDs into E. coli was examined using fluorescence microscopy. Complete loading of the bacterial cells could be achieved in less than 10 min. These studies revealed a reversible uptake process allowing the recovery and reuse of the CNDs after irradiation and before the administration of the vaccine. The success of photodynamic inactivation was verified by viability assays on agar. In a homemade flow photoreactor, the fastest successful irradiation of the bacteria could be carried out in 34 s. Therefore, the photodynamic inactivation based on CNDs is very effective. The membrane integrity of the bacteria after irradiation was verified by slide agglutination and atomic force microscopy. The method developed for the laboratory strain E. coli K12 could then be successfully applied to the important avian pathogens Bordetella avium and Ornithobacterium rhinotracheale to aid the development of novel vaccines.
The increasing development of antibiotic resistance in bacteria has been a major problem for years, both in human and veterinary medicine. Prophylactic measures, such as the use of vaccines, are of great importance in reducing the use of antibiotics in livestock. These vaccines are mainly produced based on formaldehyde inactivation. However, the latter damages the recognition elements of the bacterial proteins and thus could reduce the immune response in the animal. An alternative inactivation method developed in this work is based on gentle photodynamic inactivation using carbon nanodots (CNDs) at excitation wavelengths λex > 290 nm. The photodynamic inactivation was characterized on the nonvirulent laboratory strain Escherichia coli K12 using synthesized CNDs. For a gentle inactivation, the CNDs must be absorbed into the cytoplasm of the E. coli cell. Thus, the inactivation through photoinduced formation of reactive oxygen species only takes place inside the bacterium, which means that the outer membrane is neither damaged nor altered. The loading of the CNDs into E. coli was examined using fluorescence microscopy. Complete loading of the bacterial cells could be achieved in less than 10 min. These studies revealed a reversible uptake process allowing the recovery and reuse of the CNDs after irradiation and before the administration of the vaccine. The success of photodynamic inactivation was verified by viability assays on agar. In a homemade flow photoreactor, the fastest successful irradiation of the bacteria could be carried out in 34 s. Therefore, the photodynamic inactivation based on CNDs is very effective. The membrane integrity of the bacteria after irradiation was verified by slide agglutination and atomic force microscopy. The method developed for the laboratory strain E. coli K12 could then be successfully applied to the important avian pathogens Bordetella avium and Ornithobacterium rhinotracheale to aid the development of novel vaccines.
Die Elektrosprayionisation (ESI) ist eine der weitverbreitetsten Ionisationstechniken für flüssige Pro-ben in der Massen- und Ionenmobilitäts(IM)-Spektrometrie. Aufgrund ihrer schonenden Ionisierung wird ESI vorwiegend für empfindliche, komplexe Moleküle in der Biologie und Medizin eingesetzt. Überdies ist sie allerdings für ein sehr breites Spektrum an Substanzklassen anwendbar. Die IM-Spektrometrie wurde ursprünglich zur Detektion gasförmiger Proben entwickelt, die hauptsächlich durch radioaktive Quellen ionisiert werden. Sie ist die einzige analytische Methode, bei der Isomere in Echtzeit getrennt und über ihre charakteristische IM direkt identifiziert werden können. ESI wurde in den 90ger Jahren durch die Hill Gruppe in die IM-Spektrometrie eingeführt. Die Kombination wird bisher jedoch nur von wenigen Gruppen verwendet und hat deshalb noch ein hohes Entwick-lungspotential. Ein vielversprechendes Anwendungsfeld ist der Einsatz in der Hochleistungs-flüssigkeitschromatographie (HPLC) zur mehrdimensionalen Trennung. Heutzutage ist die HPLC die Standardmethode zur Trennung komplexer Proben in der Routineanalytik. HPLC-Trennungsgänge sind jedoch häufig langwierig und der Einsatz verschiedener Laufmittel, hoher Flussraten, von Puffern, sowie Laufmittelgradienten stellt hohe Anforderungen an die Detektoren. Die ESI-IM-Spektrometrie wurde in einigen Studien bereits als HPLC-Detektor eingesetzt, war dort bisher jedoch auf Flussratensplitting oder geringe Flussraten des Laufmittels beschränkt.
In dieser kumulativen Doktorarbeit konnte daher erstmals ein ESI IM-Spektrometer als HPLC-Detektor für den Flussratenbereich von 200-1500 μl/min entwickelt werden. Anhand von fünf Publi-kationen wurden (1) über eine umfassende Charakterisierung die Eignung des Spektrometers als HPLC-Detektor festgestellt, (2) ausgewählte komplexe Trenngänge präsentiert und (3) die Anwen-dung zum Reaktionsmonitoring und (4, 5) mögliche Weiterentwicklungen gezeigt.
Erfolgreich konnten mit dem selbst-entwickelten ESI IM-Spektrometer typische HPLC-Bedingungen wie Wassergehalte im Laufmittel von bis zu 90%, Pufferkonzentrationen von bis zu 10 mM, sowie Nachweisgrenzen von bis zu 50 nM erreicht werden. Weiterhin wurde anhand der komplexen Trennungsgänge (24 Pestizide/18 Aminosäuren) gezeigt, dass die HPLC und die IM-Spektrometrie eine hohe Orthogonalität besitzen. Eine effektive Peakkapazität von 240 wurde so realisiert. Auf der HPLC-Säule koeluierende Substanzen konnten über die Driftzeit getrennt und über ihre IM identifi-ziert werden, sodass die Gesamttrennzeiten erheblich minimiert werden konnten. Die Anwend-barkeit des ESI IM-Spektrometers zur Überwachung chemischer Synthesen wurde anhand einer dreistufigen Reaktion demonstriert. Es konnten die wichtigsten Edukte, Zwischenprodukte und Produkte aller Stufen identifiziert werden. Eine quantitative Auswertung war sowohl über eine kurze HPLC-Vortrennung als auch durch die Entwicklung eines eigenen Kalibrierverfahrens, welches die Ladungskonkurrenz bei ESI berücksichtigt, ohne HPLC möglich. Im zweiten Teil der Arbeit werden zwei Weiterentwicklungen des Spektrometers präsentiert. Eine Möglichkeit ist die Reduzierung des Drucks in den intermediären Bereich (300 - 1000 mbar) mit dem Ziel der Verringerung der benötigten Spannungen. Mithilfe von Streulichtbildern und Strom-Spannungs-Kurven wurden für geringe Drücke eine verminderte Freisetzung der Analyt-Ionen aus den Tropfen festgestellt. Die Verluste konnten jedoch über höhere elektrische Feldstärken ausgeglichen werden, sodass gleiche Nachweisgrenzen bei 500 mbar und bei 1 bar erreicht wurden. Die zweite Weiterentwicklung ist ein neuartiges Ionentors mit Pulsschaltung, welches eine Verdopplung der Auflösung auf bis zu R > 100 bei gleicher Sensitivität ermöglichte. Eine denkbare Anwendung im Bereich der Peptidanalytik wurde mit beachtlichen Auflösungen der Peptide von R = 90 gezeigt.