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The innovation of information techniques has changed many aspects of our life. In health care field, we can obtain, manage and communicate high-quality large volumetric image data by computer integrated devices, to support medical care. In this dissertation I propose several promising methods that could assist physicians in processing, observing and communicating the image data. They are included in my three research aspects: telemedicine integration, medical image visualization and image segmentation. And these methods are also demonstrated by the demo software that I developed. One of my research point focuses on medical information storage standard in telemedicine, for example DICOM, which is the predominant standard for the storage and communication of medical images. I propose a novel 3D image data storage method, which was lacking in current DICOM standard. I also created a mechanism to make use of the non-standard or private DICOM files. In this thesis I present several rendering techniques on medical image visualization to offer different display manners, both 2D and 3D, for example, cut through data volume in arbitrary degree, rendering the surface shell of the data, and rendering the semi-transparent volume of the data. A hybrid segmentation approach, designed for semi-automated segmentation of radiological image, such as CT, MRI, etc, is proposed in this thesis to get the organ or interested area from the image. This approach takes advantage of the region-based method and boundary-based methods. Three steps compose the hybrid approach: the first step gets coarse segmentation by fuzzy affinity and generates homogeneity operator; the second step divides the image by Voronoi Diagram and reclassifies the regions by the operator to refine segmentation from the previous step; the third step handles vague boundary by level set model. Topics for future research are mentioned in the end, including new supplement for DICOM standard for segmentation information storage, visualization of multimodal image information, and improvement of the segmentation approach to higher dimension.
The Andean orogen is the most outstanding example of mountain building caused by the subduction of oceanic below continental lithosphere. The Andes formed by the subduction of the Nazca and Antarctic oceanic plates under the South American continent over at least ~200 million years. Tectonic and climatic conditions vary markedly along this north-south–oriented plate boundary, which thus represents an ideal natural laboratory to study tectonic and climatic segmentation processes and their possible feedbacks. Most of the seismic energy on Earth is released by earthquakes in subduction zones, like the giant 1960, Mw 9.5 event in south-central Chile. However, the segmentation mechanisms of surface deformation during and between these giant events have remained poorly understood. The Andean margin is a key area to study seismotectonic processes because of its along-strike variability under similar plate kinematic boundary conditions. Active deformation has been widely studied in the central part of the Andes, but the south-central sector of the orogen has gathered less research efforts. This study focuses on tectonics at the Neogene and late Quaternary time scales in the Main Cordillera and coastal forearc of the south-central Andes. For both domains I document the existence of previously unrecognized active faults and present estimates of deformation rates and fault kinematics. Furthermore these data are correlated to address fundamental mountain building processes like strain partitioning and large-scale segmentation. In the Main Cordillera domain and at the Neogene timescale, I integrate structural and stratigraphic field observations with published isotopic ages to propose four main phases of coupled styles of tectonics and distribution of volcanism and magmatism. These phases can be related to the geometry and kinematics of plate convergence. At the late Pleistocene timescale, I integrate field observations with lake seismic and bathymetric profiles from the Lago Laja region, located near the Andean drainage divide. These data reveal Holocene extensional faults, which define the Lago Laja fault system. This fault system has no significant strike-slip component, contrasting with the Liquiñe-Ofqui dextral intra-arc system to the south, where Holocene strike-slip markers are ubiquitous. This contrast in structural style along the arc is coincident with a marked change in along-strike fault geometries in the forearc, across the Arauco Peninsula. Thereon I propose that a net gradient in the degree of partitioning of oblique subduction occurs across the Arauco transition zone. To the north, the margin parallel component of oblique convergence is distributed in a wide zone of diffuse deformation, while to the south it is partitioned along an intra-arc, margin-parallel strike-slip fault zone. In the coastal forearc domain and at the Neogene timescale, I integrate structural and stratigraphic data from field observations, industry reflection-seismic profiles and boreholes to emphasize the influence of climate-driven filling of the trench on the mechanics and kinematics of the margin. I show that forearc basins in the 34-45°S segment record Eocene to early Pliocene extension and subsidence followed by ongoing uplift and contraction since the late Pliocene. I interpret the first stage as caused by tectonic erosion due to high plate convergence rates and reduced trench fill. The subsequent stage, in turn, is related to accretion caused by low convergence rates and the rapid increase in trench fill after the onset of Patagonian glaciations and climate-driven exhumation at ~6-5 Ma. On the late Quaternary timescale, I integrate off-shore seismic profiles with the distribution of deformed marine terraces from Isla Santa María, dated by the radiocarbon method, to show that inverted reverse faulting controls the coastal geomorphology and segmentation of surface deformation. There, a cluster of microearthquakes illuminates one of these reverse faults, which presumingly reaches the plate interface. Furthermore, I use accounts of coseismic uplift during the 1835 M>8 earthquake made by Charles Darwin, to propose that this active reverse fault has been mechanically coupled to the megathrust. This has important implications on the assessment of seismic hazards in this, and other similar regions. These results underscore the need to study plate-boundary deformation processes at various temporal and spatial scales and to integrate geomorphologic, structural, stratigraphic, and geophysical data sets in order to understand the present distribution and causes of tectonic segmentation.
Analysis and modelling of nutrient transport and transformation processes on the catchment scale
(2007)
Analysis and modelling of nutrient transport and transformation processes on the catchment scale
(2007)
A water quality model for shallow river-lake systems and its application in river basin management
(2007)
This work documents the development and application of a new model for simulating mass transport and turnover in rivers and shallow lakes. The simulation tool called 'TRAM' is intended to complement mesoscale eco-hydrological catchment models in studies on river basin management. TRAM aims at describing the water quality of individual water bodies, using problem- and scale-adequate approaches for representing their hydrological and ecological characteristics. The need for such flexible water quality analysis and prediction tools is expected to further increase during the implementation of the European Water Framework Directive (WFD) as well as in the context of climate change research. The developed simulation tool consists of a transport and a reaction module with the latter being highly flexible with respect to the description of turnover processes in the aquatic environment. Therefore, simulation approaches of different complexity can easily be tested and model formulations can be chosen in consideration of the problem at hand, knowledge of process functioning, and data availability. Consequently, TRAM is suitable for both heavily simplified engineering applications as well as scientific ecosystem studies involving a large number of state variables, interactions, and boundary conditions. TRAM can easily be linked to catchment models off-line and it requires the use of external hydrodynamic simulation software. Parametrization of the model and visualization of simulation results are facilitated by the use of geographical information systems as well as specific pre- and post-processors. TRAM has been developed within the research project 'Management Options for the Havel River Basin' funded by the German Ministry of Education and Research. The project focused on the analysis of different options for reducing the nutrient load of surface waters. It was intended to support the implementation of the WFD in the lowland catchment of the Havel River located in North-East Germany. Within the above-mentioned study TRAM was applied with two goals in mind. In a first step, the model was used for identifying the magnitude as well as spatial and temporal patterns of nitrogen retention and sediment phosphorus release in a 100~km stretch of the highly eutrophic Lower Havel River. From the system analysis, strongly simplified conceptual approaches for modeling N-retention and P-remobilization in the studied river-lake system were obtained. In a second step, the impact of reduced external nutrient loading on the nitrogen and phosphorus concentrations of the Havel River was simulated (scenario analysis) taking into account internal retention/release. The boundary conditions for the scenario analysis such as runoff and nutrient emissions from river basins were computed by project partners using the catchment models SWIM and ArcEGMO-Urban. Based on the output of TRAM, the considered options of emission control could finally be evaluated using a site-specific assessment scale which is compatible with the requirements of the WFD. Uncertainties in the model predictions were also examined. According to simulation results, the target of the WFD -- with respect to total phosphorus concentrations in the Lower Havel River -- could be achieved in the medium-term, if the full potential for reducing point and non-point emissions was tapped. Furthermore, model results suggest that internal phosphorus loading will ease off noticeably until 2015 due to a declining pool of sedimentary mobile phosphate. Mass balance calculations revealed that the lakes of the Lower Havel River are an important nitrogen sink. This natural retention effect contributes significantly to the efforts aimed at reducing the river's nitrogen load. If a sustainable improvement of the river system's water quality is to be achieved, enhanced measures to further reduce the immissions of both phosphorus and nitrogen are required.