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Emerged marine terraces and paleoshorelines along plate margins are prominent geomorphic markers that can be used to quantify the rates and patterns of crustal deformation. The northern margin of the Central Anatolian Plateau has been interpreted as an actively deforming orogenic wedge between the North Anatolian Fault and the Black Sea. Here we use uplifted marine terraces across principal faults on the Sinop Peninsula at the central northern side of the Pontide orogenic wedge to unravel patterns of Quaternary faulting and orogenic wedge behavior. We leveled the present-day elevations of paleoshorelines and dated marine terrace deposits using optically stimulated luminescence (OSL) to determine coastal uplift. The elevations of the paleoshorelines vary between 4 +/- 0.2 and 67 +/- 1.4 m above sea level and OSL ages suggest terrace formation episodes during interglacial periods at ca 125, 190, 400 and 570 ka, corresponding to marine isotopic stages (MIS) 5e, 7a, 11 and 15. Mean apparent vertical displacement rates (without eustatic correction) deduced from these terraces range between 0.02 and 0.18 mm/a, with intermittent faster rates of up to 0.26 mm/a. We obtained higher rates at the eastern and southern parts of the peninsula, toward the hinterland, indicating non-uniform uplift across the different morphotectonic segments of the peninsula. Our data are consistent with active on- and offshore faulting across the Sinop Peninsula. When integrated with regional tectonic observations, the faulting pattern reflects shortening distributed over a broad region of the northern margin of the Central Anatolian Plateau during the Quaternary.
We document Quaternary fluvial incision driven by fault-controlled surface deformation in the inverted intermontane Gökirmak Basin in the Central Pontide mountains along the northern margin of the Central Anatolian Plateau. In-situ-produced Be-10, Ne-21, and Cl-36 concentrations from gravel-covered fluvial terraces and pediment surfaces along the trunk stream of the basin (the Gökirmak River) yield model exposure ages ranging from 71ka to 34645ka and average fluvial incision rates over the past similar to 350ka of 0.280.01mm a(-1). Similarities between river incision rates and coastal uplift rates at the Black Sea coast suggest that regional uplift is responsible for the river incision. Model exposure ages of deformed pediment surfaces along tributaries of the trunk stream range from 605ka to 110 +/- 10ka, demonstrating that the thrust faults responsible for pediment deformation were active after those times and were likely active earlier as well as explaining the topographic relief of the region. Together, our data demonstrate cumulative incision that is linked to active internal shortening and uplift of similar to 0.3mm a(-1) in the Central Pontide orogenic wedge, which may ultimately contribute to the lateral growth of the northern Anatolian Plateau.
Surface uplift at the northern margin of the Central Anatolian Plateau (CAP) is integrally tied to the evolution of the Central Pontides (CP), between the North Anatolian Fault (NAF) and the Black Sea. Our regional morphometric and plate kinematic analyses reveal topographic anomalies, steep channel gradients, and local high relief areas as indicators of ongoing differential surface uplift, which is higher in the western CP compared to the eastern CP and fault-normal components of geodetic slip vectors and the character of tectonic activity of the NAF suggest that stress is accumulated in its broad restraining bend. Seismic reflection and structural field data show evidence for a deep structural detachment horizon responsible for the formation of an actively northward growing orogenic wedge with a positive flower-structure geometry across the CP and the NAF. Taken together, the tectonic, plate kinematic, and geomorphic observations imply that the NAF is the main driving mechanism for wedge tectonics and uplift in the CP. In addition, the NAF Zone defines the boundary between the extensional CAP and the contractional CP. The syntectonic deposits within inverted intermontane basins and deeply incised gorges suggest that the formation of relief, changes in sedimentary dynamics, and > 1 km fluvial incision resulted from accelerated uplift starting in the early Pliocene. The Central Pontides thus provide an example of an accretionary wedge with surface-breaking faults that play a critical role in mountain building processes, sedimentary basin development, and ensuing lateral growth of a continental plateau since the end of the Miocene.
An electrochemical assay for the indication of the activity of the cell bound differentiation marker alkaline phosphatase (ALP) is proposed using voltammetry on an in-vitro cell culture. The basis of the assay is cultivation of cells on gold microelectrodes in wells of a microplate, catalytic hydrolysis of p-aminophenyl phosphate by ALP and indication of p-aminophenol oxidation by square wave voltammetry (SWV) with the sensors onto which the cells attached. The morphology of the bone marrow stromal cell line (MBA-15) on the electrode surface was investigated and it exhibited in vitro osteogenic characteristics. Since ALP is expressed on the cell surface in early differentiation stage of osteoblastic cells, its activity was followed after different culture times over a period of 144 h by recording repetitive voltammograms at different time points upon addition of the substrate p-aminophenyl phosphate. The ALP activity was estimated from the signal increase related to formation rate of p-aminophenol and the number of cells. The highest value was measured at 120 h, when the cells reached confluence. The results of the electrochemical activity assay are consistent with the colorimetric acquired value from p-nitrophenol formation rate.
TusA is a versatile protein that links translation efficiency to cell division in Escherichia coli
(2021)
To enable accurate and efficient translation, sulfur modifications are introduced posttranscriptionally into nucleosides in tRNAs. The biosynthesis of tRNA sulfur modifications involves unique sulfur trafficking systems for the incorporation of sulfur atoms in different nucleosides of tRNA. One of the proteins that is involved in inserting the sulfur for 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U34) modifications in tRNAs is the TusA protein. TusA, however, is a versatile protein that is also involved in numerous other cellular pathways. Despite its role as a sulfur transfer protein for the 2-thiouridine formation in tRNA, a fundamental role of TusA in the general physiology of Escherichia coli has also been discovered. Poor viability, a defect in cell division, and a filamentous cell morphology have been described previously for tusA-deficient cells. In this report, we aimed to dissect the role of TusA for cell viability. We were able to show that the lack of the thiolation status of wobble uridine (U-34) nucleotides present on Lys, Gln, or Glu in tRNAs has a major consequence on the translation efficiency of proteins; among the affected targets are the proteins RpoS and Fis. Both proteins are major regulatory factors, and the deregulation of their abundance consequently has a major effect on the cellular regulatory network, with one consequence being a defect in cell division by regulating the FtsZ ring formation. <br /> IMPORTANCE More than 100 different modifications are found in RNAs. One of these modifications is the mnm(5)s(2)U modification at the wobble position 34 of tRNAs for Lys, Gln, and Glu. The functional significance of U34 modifications is substantial since it restricts the conformational flexibility of the anticodon, thus providing translational fidelity. We show that in an Escherichia coli TusA mutant strain, involved in sulfur transfer for the mnm(5)s(2)U34 thio modifications, the translation efficiency of RpoS and Fis, two major cellular regulatory proteins, is altered. Therefore, in addition to the transcriptional regulation and the factors that influence protein stability, tRNA modifications that ensure the translational efficiency provide an additional crucial regulatory factor for protein synthesis.
The Gezi uprising can be considered a crucial turning in Turkish politics. As a response to countrywide democratic protests, the Justice and Development Party (AKP) government revived the security state, escalated authoritarian tendencies, and started to organize a nationalist, Islamist, and conservative backlash. This essay argues that the Gezi Park protests revealed both the fragility of the AKP's hegemony and the limits of the dominant political group habitus, which were promoted by the party to consolidate political polarization in favor of the party's hegemony. Moreover, it is argued that the Gezi uprising transformed the culture of political protests in the country and paved the way for the emergence of affirmative resistance, radical imagination, and a new politics of desire and dignity against authoritarian and neoliberal policies.
Almost half of the political life has been experienced under the state of emergency and state of siege policies in the Turkish Republic. In spite of such a striking number and continuity in the deployment of legal emergency powers, there are just a few legal and political studies examining the reasons for such permanency in governing practices. To fill this gap, this paper aims to discuss one of the most important sources of the ‘permanent’ political crisis in the country: the historical evolution of legal emergency power. In order to highlight how these policies have intensified the highly fragile citizenship regime by weakening the separation of power, repressing the use of political rights and increasing the discretionary power of both the executive and judiciary authorities, the paper sheds light on the emergence and production of a specific form of legality based on the idea of emergency and the principle of executive prerogative. In that context, it aims to provide a genealogical explanation of the evolution of the exceptional form of the nation-state, which is based on the way political society, representation, and legitimacy have been instituted and accompanying failure of the ruling classes in building hegemony in the country.
Tuning of the excited-state properties and photovoltaic performance in PPV-based polymer blends
(2008)
We study the global singularity structure of solutions to 3-D semilinear wave equations with discontinuous initial data. More precisely, using Strichartz' inequality we show that the solutions stay conormal after nonlinear interaction if the Cauchy data are conormal along a circle. (C) 2003 Elsevier Inc. All rights reserved
Closed and re-opened for business: C-2 branched carbohydrates 1 cyclize under conditions of decarboxylation to the hitherto unknown carbohydrate 1,2-lactones 2 in high yields. The gluco isomer can be opened at the anomeric position with various nuceophiles in the presence of Sc(OTf)3, which allows the stereoselective synthesis of 1-functionalized glucose derivatives 3. Thus, 1,2-bis-C-branched saccharides become available in only a few steps starting from glycals.
Bicyclic carbohydrate 1,2-lactones have been synthesized in only two steps and high yields by saponification and subsequent cyclization from known malonate addition products to glycals. The gluco-configured lactone serves as an important precursor for diversity-oriented syntheses. Thus, stereoselective opening of the lactone ring was realized with various nucleophiles in the presence of Sc(OTf)(3). This enabled the introduction of different substituents at the anomeric position, to afford a broad variety of 1-functionalized carbohydrates. On the other hand, stereoselective alpha-substitution of the gluco-configured lactone with different electrophiles and subsequent ring opening gives a collection of 2-functionalized saccharides. More than 30 products have been isolated in analytically pure form, and their configurations were unequivocally established by various NMR methods. Thus, carbohydrate 1,2-lactones are attractive precursors for the stereoselective synthesis of diverse saccharides.
C-branched carbohydrates are of current interest for glycochemistry, are widely found in nature and serve as important subunits in many antibiotics, bacterial polysaccharides and macrolides. Among C-functionalized saccharides, 2-C-branched carbohydrates represent challenging structures for synthetic chemists, since in contrast to C-glycosides they are not easily accessible from glycosyl bromides or other simple precursors. In this perspective we want to summarize recent approaches to 2-C-branched carbohydrates over the past fifteen years. The two main strategies are based on ring-opening of 1,2-cyclopropanated carbohydrates by various reagents, as well as radical additions to glycals and further transformations, developed in our group. Both methods are characterized by high stereoselectivities and good yields and give access to a broad variety of functionalized carbohydrate 2-C-analogs.
Hydration shells around ions are crucial for many fundamental biological and chemical processes. Their local physicochemical properties are quite different from those of bulk water and hard to probe experimentally. We address this problem by combining soft X-ray spectroscopy using a liquid jet and molecular dynamics (MD) simulations together with ab initio electronic structure calculations to elucidate the water ion interaction in a MgCl2 solution at the molecular level. Our results reveal that salt ions mainly affect the electronic properties of water molecules in close vicinity and that the oxygen K-edge X-ray emission spectrum of water molecules in the first solvation shell differs significantly from that of bulk water. Ion-specific effects are identified by fingerprint features in the water X-ray emission spectra. While Mg2+ ions cause a bathochromic shift of the water lone pair orbital, the 3p orbital of the Cl- ions causes an additional peak in the water emission spectrum at around 528 eV.
In the current work, X-ray emission spectra of aqueous solutions of different inorganic salts within the Hofmeister series are presented. The results reflect the direct interaction of the ions with the water molecules and therefore, reveal general properties of the salt-water interactions. Within the experimental precision a significant effect of the ions on the water structure has been observed but no ordering according to the structure maker/structure breaker concept could be mirrored in the results indicating that the Hofmeister effect if existent may be caused by more complex interactions.
X-ray spectroscopy is a powerful tool to study the local charge distribution of chemical systems. Together with the liquid jet it becomes possible to probe chemical systems in their natural environment, the liquid phase. In this work, we present X-ray absorption (XA), X-ray emission (XE) and resonant inelastic X-ray scattering (RIXS) data of pure water and various salt solutions and show the possibilities these methods offer to elucidate the nature of ion-water interaction.
Excitable solitons
(2020)
Excitable pulses are among the most widespread dynamical patterns that occur in many different systems, ranging from biological cells to chemical reactions and ecological populations. Traditionally, the mutual annihilation of two colliding pulses is regarded as their prototypical signature. Here we show that colliding excitable pulses may exhibit solitonlike crossover and pulse nucleation if the system obeys a mass conservation constraint. In contrast to previous observations in systems without mass conservation, these alternative collision scenarios are robustly observed over a wide range of parameters. We demonstrate our findings using a model of intracellular actin waves since, on time scales of wave propagations over the cell scale, cells obey conservation of actin monomers. The results provide a key concept to understand the ubiquitous occurrence of actin waves in cells, suggesting why they are so common, and why their dynamics is robust and long-lived.
CAMPHOR: A GOOD MODEL FOR ILLUSTRATING NMR TECHNIQUES. The use of Nuclear Magnetic Resonance spectroscopy to establish the three-dimensional structures of molecules is an important component of modern Chemistry courses. The combination of techniques that can be used for this purpose is conveniently illustrated by their application to the camphor molecule. This paper presents applications of several techniques used in NMR spectral interpretation in an increasing order of complexity. The result of individual experiments is illustrated in order to familiarize the user with the way connectivity through bonds and through space is established from 1D/2D-NMR spectra and molecular stereochemistry is determined from different NMR experiments
Low-frequency fluctuations are pervasively observed in the solar wind. The present paper theoretically calculates the steady state spectra of low-frequency electromagnetic (EM) fluctuations of the Alfvenic type for thermal equilibrium plasma. The analysis is based upon a recently formulated theory of spontaneously emitted EM fluctuations in magnetized thermal plasmas. It is found that the fluctuations in the magnetosonic mode branch is constant, while the kinetic Alfvenic mode spectrum is dependent on a form factor that is a function of perpendicular wave number. Potential applicability of the present work in the wider context of heliospheric research is also discussed.