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Institute
- Institut für Geowissenschaften (179) (remove)
This thesis investigates how the permafrost microbiota responds to global warming. In detail, the constraints behind methane production in thawing permafrost were linked to methanogenic activity, abundance and composition. Furthermore, this thesis offers new insights into microbial adaptions to the changing environmental conditions during global warming. This was assesed by investigating the potential ecological relevant functions encoded by plasmid DNA within the permafrost microbiota. Permafrost of both interglacial and glacial origin spanning the Holocene to the late Pleistocene, including Eemian, were studied during long-term thaw incubations. Furthermore, several permafrost cores of different stratigraphy, soil type and vegetation cover were used to target the main constraints behind methane production during short-term thaw simulations. Short- and long-term incubations simulating thaw with and without the addition of substrate were combined with activity measurements, amplicon and metagenomic sequencing of permanently frozen and seasonally thawed active layer. Combined, it allowed to address the following questions. i) What constraints methane production when permafrost thaws and how is this linked to methanogenic activity, abundance and composition? ii) How does the methanogenic community composition change during long-term thawing conditions? iii) Which potential ecological relevant functions are encoded by plasmid DNA in active layer soils?
The major outcomes of this thesis are as follows. i) Methane production from permafrost after long-term thaw simulation was found to be constrained mainly by the abundance of methanogens and the archaeal community composition. Deposits formed during periods of warmer temperatures and increased precipitation, (here represented by deposits from the Late Pleistocene of both interstadial and interglacial periods) were found to respond strongest to thawing conditions and to contain an archaeal community dominated by methanogenic archaea (40% and 100% of all detected archaea). Methanogenic population size and carbon density were identified as main predictors for potential methane production in thawing permafrost in short-term incubations when substrate was sufficiently available.
ii) Besides determining the methanogenic activity after long-term thaw, the paleoenvironmental conditions were also found to influence the response of the methanogenic community composition. Substantial shifts within methanogenic community structure and a drop in diversity were observed in deposits formed during warmer periods, but not in deposits from stadials, when colder and drier conditions occurred. Overall, a shift towards a dominance of hydrogenotrophic methanogens was observed in all samples, except for the oldest interglacial deposits from the Eemian, which displayed a potential dominance of acetoclastic methanogens. The Eemian, which is discussed to serve as an analogue to current climate conditions, contained highly active methanogenic communities. However, all potential limitation of methane production after permafrost thaw, it means methanogenic community structure, methanogenic population size, and substrate pool might be overcome after permafrost had thawed on the long-term. iii) Enrichments with soil from the seasonally thawed active layer revealed that its plasmid DNA (‘metaplasmidome’) carries stress-response genes. In particular it encoded antibiotic resistance genes, heavy metal resistance genes, cold shock proteins and genes encoding UV-protection. Those are functions that are directly involved in the adaptation of microbial communities to stresses in polar environments. It was further found that metaplasmidomes from the Siberian active layer originate mainly from Gammaproteobacteria. By applying enrichment cultures followed by plasmid DNA extraction it was possible to obtain a higher average contigs length and significantly higher recovery of plasmid sequences than from extracting plasmid sequences from metagenomes. The approach of analyzing ‘metaplasmidomes’ established in this thesis is therefore suitable for studying the ecological role of plasmids in polar environments in general.
This thesis emphasizes that including microbial community dynamics have the potential to improve permafrost-carbon projections. Microbially mediated methane release from permafrost environments may significantly impact future climate change. This thesis identified drivers of methanogenic composition, abundance and activity in thawing permafrost landscapes. Finally, this thesis underlines the importance to study how the current warming Arctic affects microbial communities in order to gain more insight into microbial response and adaptation strategies.
The transfer of particulate organic carbon from continents to the ocean is an important component of the global carbon cycle. Transfer to and burial of photosynthetically fixed biospheric organic carbon in marine sediments can effectively sequester atmospheric carbon dioxide over geological timescales. The exhumation and erosion of fossil organic carbon contained in sedimentary rocks, i.e. petrogenic carbon, can result in remineralization, releasing carbon to the atmosphere. In contrast, eroded petrogenic organic carbon that gets transferred back to the ocean and reburied does not affect atmospheric carbon content.
Mountain ranges play a key role in this transfer since they can source vast amounts of sediment including particulate organic carbon. Globally, the export of both, biospheric and petrogenic organic carbon has been linked to sediment export. Additionally, short transfer times from mountains to the ocean and high sediment concentrations have been shown to increase the likelihood of organic carbon burial. While the importance of mountain ranges in the organic carbon cycle is now widely recognized, the processes acting within mountain ranges to influence the storage, cycling and mobilization of organic carbon, as well as carbon fluxes from mountain ranges remain poorly constrained.
In this thesis, I employ different methods to assess the nature and fate of particulate organic carbon in mountain belts, ranging from the molecular to regional landscape scale. These studies are located along the Trans-Himalayan Kali Gandaki River in Central Nepal. This river traverses all major geological and climatic zones of the Himalaya, from the dry northern Tibetan plateau to the high-relief, monsoon dominated steep High Himalaya and the lower relief and abundant vegetation of the Lesser Himalayan region.
First, I document how biospheric organic matter has accumulated during the Holocene in the headwaters of the Kali Gandaki River valley, by combining compound specific isotope measurements with different dating methods and grain size data, and investigate the stability of this organic carbon reservoir on millennial timescales. I show, that around 1.6 ka an eco-geomorphic tipping point occurred leading to a destabilization of the landscape resulting in today’s high erosion rates and the excavation of the aged organic carbon reservoir. This study highlights the climatic and geomorphic controls on biospheric organic carbon storage and release from mountain ranges.
Second, I systematically investigate the spatial variation of particulate organic carbon fluxes across the Himalaya along the Kali Gandaki River, using bulk stable and radioactive isotopes combined with a new Bayesian modeling approach. The detailed dataset allows the distinction of aged and modern biospheric organic carbon as well as petrogenic organic carbon across the Himalayan mountain range and the investigation of the role of climatic and geomorphic factors in their riverine export. The data suggest a decoupling of the particulate organic carbon from the sediment yield along the Kali Gandaki River, partially driven by climatic and geomorphic processes. In contrast to the suspended sediment, a large part of the particulate organic carbon exported by the river originates from the Tibetan part of the catchment and is dominated by petrogenic organic carbon derived from Jurassic shales with only minor contributions of modern and aged biospheric organic carbon. These findings emphasize the importance of organic carbon source distribution and erosion mechanisms in determining the organic carbon export from mountain ranges.
In a third step, I explore the potential of ultra-high resolution mass spectrometry for particulate organic carbon transport studies. I have generated a novel and unprecedented high-resolution molecular dataset, which contains up to 103 molecular formulas of the lipid fraction of particulate organic matter for modern and aged biospheric carbon, petrogenic organic carbon and river sediments. First, I test if this dataset can be used to better resolve different organic carbon sources and to identify new geochemical tracers. Using multivariate statistics, I identify up to 10² characteristic molecular formulas for the major organic carbon sources in the upper part of the Kali Gandaki catchment, and trace their transfer from the surrounding landscape into the river sediment. Second, I test the potential of the molecular dataset to trace molecular transformations along source-to-sink pathways. I identify changes in molecular metrics derived from the dataset, which are characteristic of transformation processes during incorporation of litter into soil, the aging of soil material, and the mobilization of the organic carbon into the river. These two studies demonstrate that high-resolution molecular datasets open a promising analytical window on particulate organic carbon and can provide novel insights into the composition, sourcing and transformation of riverine particulate organic carbon.
Collectively, these studies advance our understanding of the processes contributing to the storage and mobilization of organic carbon in the Central Himalaya, the mountain belt that dominates global erosional fluxes. They do so by identifying the major sources of particulate organic carbon to the Trans-Himalayan Kali Gandaki River, by elucidating their sensitivity to climate and geomorphic processes, and by identifying some of the transformations of this material on the molecular scale. As a result, the thesis demonstrates that the amount and composition of organic carbon routed from mountain belts is a function of the dynamic interactions of geologic, biologic, geomorphic and climatic processes within the mountain belt. This understanding will ultimately help in answering whether the build-up and erosion of mountain ranges over geological time represents a net carbon source or sink to the atmosphere. Beyond this, the thesis contributes to our technical ability to characterize organic matter and attribute it to sources by scoping the potential of high-end molecular analysis.
Selenite pseudomorphs
(2019)
During lower sea levels in glacial periods, deep permafrost formed on large continental shelf areas of the Arctic Ocean. Subsequent sea level rise and coastal erosion created subsea permafrost, which generally degrades after inundation under the influence of a complex suite of marine, near-shore processes. Global warming is especially pronounced in the Arctic, and will increase the transition to and the degradation of subsea permafrost, with implications for atmospheric climate forcing, offshore infrastructure, and aquatic ecosystems.
This thesis combines new geophysical, borehole observational and modelling approaches to enhance our understanding of subsea permafrost dynamics. Three specific areas for advancement were identified: (I) sparsity of observational data, (II) lacking implementation of salt infiltration mechanisms in models, and (III) poor understanding of the regional differences in key driving parameters. This study tested the combination of spectral ratios of the ambient vibration seismic wavefield, together with estimated shear wave velocity from seismic interferometry analysis, for estimating the thickness of the unfrozen sediment overlying the ice-bonded permafrost offshore. Mesoscale numerical calculations (10^1 to 10^2 m, thousands of years) were employed to develop and solve the coupled heat diffusion and salt transport equations including phase change effects. Model soil parameters were constrained by borehole data, and the impact of a variety of influences during the transgression was tested in modelling studies. In addition, two inversion schemes (particle swarm optimization and a least-square method) were used to reconstruct temperature histories for the past 200-300 years in the Laptev Sea region in Siberia from two permafrost borehole temperature records. These data were evaluated against larger scale reconstructions from the region.
It was found (I) that peaks in spectral ratios modelled for three-layer, one-dimensional systems corresponded with thaw depths. Around Muostakh Island in the central Laptev Sea seismic receivers were deployed on the seabed. Derived depths of the ice-bonded permafrost table were between 3.7-20.7 m ± 15 %, increasing with distance from the coast. (II) Temperatures modelled during the transition to subsea permafrost resembled isothermal conditions after about 2000 years of inundation at Cape Mamontov Klyk, consistent with observations from offshore boreholes. Stratigraphic scenarios showed that salt distribution and infiltration had a large impact on the ice saturation in the sediments. Three key factors were identified that, when changed, shifted the modelled permafrost thaw depth most strongly: bottom water temperatures, shoreline retreat rate and initial temperature before inundation. Salt transport based on diffusion and contribution from arbitrary density-driven mechanisms only accounted for about 50 % of observed thaw depths at offshore sites hundreds to thousands of years after inundation. This bias was found consistently at all three sites in the Laptev Sea region. (III) In the temperature reconstructions, distinct differences in the local temperature histories between the western Laptev Sea and the Lena Delta sites were recognized, such as a transition to warmer temperatures a century later in the western Laptev Sea as well as a peak in warming three decades later. The local permafrost surface temperature history at Sardakh Island in the Lena Delta was reminiscent of the circum-Arctic regional average trends. However, Mamontov Klyk in the western Laptev Sea was consistent to Arctic trends only in the most recent decade and was more similar to northern hemispheric mean trends. Both sites were consistent with a rapid synoptic recent warming.
In conclusion, the consistency between modelled response, expected permafrost distribution, and observational data suggests that the passive seismic method is promising for the determination of the thickness of unfrozen sediment on the continental Arctic shelf. The quantified gap between currently modelled and observed thaw depths means that the impact of degradation on climate forcing, ecosystems, and infrastructure is larger than current models predict. This discrepancy suggests the importance of further mechanisms of salt penetration and thaw that have not been considered – either pre-inundation or post-inundation, or both. In addition, any meaningful modelling of subsea permafrost would have to constrain the identified key factors and their regional differences well. The shallow permafrost boreholes provide missing well-resolved short-scale temperature information in the coastal permafrost tundra of the Arctic. As local differences from circum-Arctic reconstructions, such as later warming and higher warming magnitude, were shown to exist in this region, these results provide a basis for local surface temperature record parameterization of climate and, in particular, permafrost models. The results of this work bring us one step further to understanding the full picture of the transition from terrestrial to subsea permafrost.
The Atlantic Meridional Overturning Circulation (AMOC) is likely the most well-known system of ocean currents on Earth, redistributing heat, nutrients and carbon over a large part of the Earth’s surface and affecting global climate as a result. Due to enhanced freshwater fluxes into the subpolar North Atlantic as a response to global warming, the AMOC is expected, and may have already started, to weaken and these changes will likely have global impacts. It is therefore of considerable relevance to improve our understanding of past and future AMOC changes. My thesis tries to answer some of the open questions in this field by giving strong evidence that the AMOC has already weakened over the last century, by narrowing future projections of this slowdown and
by studying the impacts on global surface warming.
While there have been various studies trying to reconstruct the strength of the overturning circulation in the past, often based on model simulations in combination with observations (Jackson et al., 2016, Kanzow et al., 2010) or proxies (Frajka-Williams, 2015, Latif et al., 2006), the results so far, due to lack of direct measurements, have been inconclusive. In the first paper I build on previous work that links the anomalously low sea surface temperatures (SSTs) in the North Atlantic with the reduced meridional heat transport due to a weaker AMOC. Using the output of a high-resolution global climate model, I derive a characteristic spatial and seasonal SST fingerprint of an AMOC slowdown and an improved SST-based AMOC index. The same fingerprint is seen in
the observational SSTs since the late 19th Century, giving strong evidence that since then the AMOC has slowed down. In addition, the reconstruction of the historical overturning strength with the new AMOC index agrees well with and extends the results of earlier studies as well as the direct measurements from the RAPID project and shows a strong decline of the AMOC by about 15% (3±1 Sv) since the mid-20th Century (Caesar et al., 2018).
The reconstruction of the historical overturning strength with the AMOC index enables us to weight future AMOC projections based on their skill in modeling the historical AMOC as described in the second paper of this thesis (Olson et al., 2018). Using Bayesian model averaging we considerably narrow the projections of the CMIP5 ensemble to a decrease of -4.0 Sv and -6.8 Sv between the years 1960-1999 and 2060-2099 for the RCP4.5 and RCP8.5 emission scenarios, respectively. These values fit to, yet are at the lower end of, previously published estimates.
In the third paper I examine how the AMOC slowdown affects the global mean surface temperature (GMST) with a focus on how it will change the ocean heat uptake (OHC). Accounting for the effect of changes in the radiative forcing on the GMST, I test how AMOC variations correlate with the residual part of surface temperature changes in the past. I find that the correlation is positive which fits the understanding that the deep-water formation that is important in driving the AMOC cools the deep ocean and therefore warms the surface (Caesar et al., 2019). The future weakening of the overturning circulation could therefore delay global surface warming.
Due to nonlinear behavior and scale specific changes it can be difficult to study the dominant processes and modes that drive climate variability. In the fourth paper we develop and test a new technique based on the wavelet multiscale correlation (WMC) similarity measure to study climate variability on different temporal and spatial scales (Agarwal et al., 2018). In a fifth contribution to my thesis this method is applied to the observed sea surface temperatures. The results reconfirm well-known relations between SST anomalies such as the El Niño-Southern Oscillation (ENSO) and the Pacific Decadal Oscillation (PDO) on inter-annual and decadal timescales, respectively. They
furthermore give new insights into the characteristics and origins of long-range teleconnections, for example, that the teleconnection between ENSO and Indian Ocean dipole exist mainly between the northern part of the ENSO tongue and the equatorial Indian Ocean, and provides therefore valuable knowledge about the regions that are necessary to include when modeling regional climate variability at a certain scale (Agarwal et al., 2019).
In summary, my PhD thesis investigates past and future AMOC variability and its effects on global mean surface temperature by utilizing a combination of observational sea surface data and the output of historical and future climate model simulations from both the high-resolution CM2.6 model as well as the CMIP5 ensemble. It further includes the development and validation of a new method to study climate variability, that, applied to the observed sea surface temperatures, gives new insight about teleconnections in the Earth System. My findings provide evidence that the AMOC has already slowed down, will continue to do so in the future, and will impact the global mean temperature. Further impacts of an AMOC slowdown may include increased sea-level rise at the U.S. east coast (Ezer, 2015), heat extremes in Europe (Duchez et al., 2016) and increased storm activity in the North Atlantic region (Jackson et al., 2015), all of which have significant socio-economic implications.