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Ecologists carry a well-stocked toolbox with a great variety of sampling methods, statistical analyses and modelling tools, and new methods are constantly appearing. Evaluation and optimisation of these methods is crucial to guide methodological choices. Simulating error-free data or taking high-quality data to qualify methods is common practice. Here, we emphasise the methodology of the 'virtual ecologist' (VE) approach where simulated data and observer models are used to mimic real species and how they are 'virtually' observed. This virtual data is then subjected to statistical analyses and modelling, and the results are evaluated against the 'true' simulated data. The VE approach is an intuitive and powerful evaluation framework that allows a quality assessment of sampling protocols, analyses and modelling tools. It works under controlled conditions as well as under consideration of confounding factors such as animal movement and biased observer behaviour. In this review, we promote the approach as a rigorous research tool, and demonstrate its capabilities and practical relevance. We explore past uses of VE in different ecological research fields, where it mainly has been used to test and improve sampling regimes as well as for testing and comparing models, for example species distribution models. We discuss its benefits as well as potential limitations, and provide some practical considerations for designing VE studies. Finally, research fields are identified for which the approach could be useful in the future. We conclude that VE could foster the integration of theoretical and empirical work and stimulate work that goes far beyond sampling methods, leading to new questions, theories, and better mechanistic understanding of ecological systems.
Germination marks a critical transition in plant life that is prone to high mortality. Strong selection pressure is therefore expected to finely tune it to environmental conditions. Our study on the common Mediterranean grass Brachypodium hybridum assessed whether germination behavior changes systematically along a steep natural rainfall gradient ranging from harsh desert to rather mild mesic-Mediterranean conditions, We specifically tested hypotheses that germination behavior confers greater risk-spreading in populations from drier, unpredictable environments, and that seeds from wetter populations are better competitors. In 14 populations (spanning 114-954 mm annual rainfall) we assessed three alternative key parameters of germination in a greenhouse experiment: between-year dormancy, days to emergence within a season, and temporal spread. Addition of neighbor seeds accounted for competition as another crucial environmental factor. In six of the 14 populations, we also compared seeds originating from corresponding north (more mesic) and south (more arid) exposed hill slopes to test whether germination patterns along the large-scale rainfall gradient are paralleled at this smaller scale. B. hybridum exhibited generally high germination fractions and rapid emergence with very little temporal spread, indicating overall little risk-spreading germination. Surprisingly, none of the three parameters changed systematically with increasing aridity, neither at large scale along the rainfall gradient nor at small scale between north and south exposures. Neighbor seeds, however, mildly suppressed germination. Germination of neighbor seeds, in turn, was more strongly suppressed by B. hybridum seeds from drier populations, and this effect was stronger for forb than for grass neighbor species. Our results provide strong evidence that increased risk-spreading germination is not a universal, essential strategy to persist in increasingly dry, unpredictable environments. They also highlight that competition with neighbors occurs even at the earliest plant life stage. Since neighbor effects were species-specific, competition among seeds can affect community composition at later plant stages.
Although the effects of grazing-induced savannah degradation on animal diversity are well documented, knowledge of how they affect space use or responding behaviour remains poor. In this study, we analysed space use of the spotted sand lizard (Pedioplanis l. lineoocellata) in degraded versus nondegraded habitats of southern Kalahari savannah habitats. Lizards were radio tracked, daily movement distances recorded and home range sizes calculated. In degraded Kalahari savannah habitats where plant diversity and perennial grass cover are low but shrub cover high, P. lineoocellata moves larger distances (40.88 +/- 6.42 m versus 27.43 +/- 5.08 m) and occupies larger home ranges (646.64 +/- 244.84 m(2) versus 209.15 +/- 109.84 m(2)) than in nondegraded habitats (high plant diversity, high perennial grass cover and low shrub cover). We assume that this increase in daily movement distances and home range sizes is a behavioural plasticity to limited food resources in degraded savannah habitats. Although P. lineoocellata is able to adjust to resource-poor savannah habitats, the increase in the lizard's movement activities is likely to result in a higher predation risk. This is supported by the lower availability of protective vegetation i.e. perennial grass cover. Hence, we conclude that despite behavioural plasticity of P. lineoocellata, overgrazing has a severe negative impact on the space use of P. lineoocellata.
The present-day vegetation in the tropics is mainly characterized by forests worldwide except in tropical East Africa, where forests only occur as patches at the coast and in the uplands. These forest patches result from the peculiar aridity that is linked to the uplift of the region during the Late Cenozoic. The Late Cenozoic vegetation history of East Africa is of particular interest as it has set the scene for the contemporary events in mammal and hominin evolution. In this study, we investigate the conditions under which these forest patches could have been connected, and a previous continuous forest belt could have extended and fragmented. We apply a dynamic vegetation model with a set of climatic scenarios in which we systematically alter the present-day environmental conditions such that they would be more favourable for a continuous forest belt in tropical East Africa. We consider varying environmental factors, namely temperature, precipitation and atmospheric CO2 concentrations. Our results show that all of these variables play a significant role in supporting the forest biomes and a continuous forest belt could have occurred under certain combinations of these settings. With our current knowledge of the palaeoenvironmental history of East Africa, it is likely that the region hosted these conditions during the Late Cenozoic. Recent improvements on environmental hypotheses of hominin evolution highlight the role of periods of short and extreme climate variability during the Late Cenozoic specific to East Africa in driving evolution. Our results elucidate how the forest biomes of East Africa can appear and disappear under fluctuating environmental conditions and demonstrate how this climate variability might be recognized on the biosphere level.
Military areas are valuable habitats and refuges for rare and endangered plants and animals. We developed a new approach applying innovative methods of hyperspectral remote sensing to bridge the existing gap between remote sensing technology and the demands of the nature conservation community. Remote sensing has already proven to be a valuable monitoring instrument. However, the approaches lack the consideration of the demands of applied nature conservation which includes the legal demands of the EU Habitat Directive. Following the idea of the Vital Signs Monitoring in the USA, we identified a subset of the highest priority monitoring indicators for our study area. We analyzed continuous spectral response curves and tested the measurability of N=19 indicators on the basis of complexity levels aggregated from extensive vegetation assemblages. The spectral differentiability for the floristic as well as faunistic indicators revealed values up to 100% accuracy. We point out difficulties when it comes to distinguishing faunistic habitat requirements of several species adapted to dry open landscapes, which in this case results in OVERALL ACCURACY of 67, 87-95, and 35% in the error matrix. In summary, we provide an applicable and feasible method to facilitating monitoring military areas by hyperspectral remote sensing in the following. (C) 2014 Elsevier Ltd. All rights reserved.
Improving our understanding of biodiversity and ecosystem functioning and our capacity to inform ecosystem management requires an integrated framework for functional biodiversity research (FBR). However, adequate integration among empirical approaches (monitoring and experimental) and modelling has rarely been achieved in FBR. We offer an appraisal of the issues involved and chart a course towards enhanced integration. A major element of this path is the joint orientation towards the continuous refinement of a theoretical framework for FBR that links theory testing and generalization with applied research oriented towards the conservation of biodiversity and ecosystem functioning. We further emphasize existing decision-making frameworks as suitable instruments to practically merge these different aims of FBR and bring them into application. This integrated framework requires joint research planning, and should improve communication and stimulate collaboration between modellers and empiricists, thereby overcoming existing reservations and prejudices. The implementation of this integrative research agenda for FBR requires an adaptation in most national and international funding schemes in order to accommodate such joint teams and their more complex structures and data needs.
GrassPlot is a collaborative vegetation-plot database organised by the Eurasian Dry Grassland Group (EDGG) and listed in the Global Index of Vegetation-Plot Databases (GIVD ID EU-00-003). GrassPlot collects plot records (releves) from grasslands and other open habitats of the Palaearctic biogeographic realm. It focuses on precisely delimited plots of eight standard grain sizes (0.0001; 0.001;... 1,000 m(2)) and on nested-plot series with at least four different grain sizes. The usage of GrassPlot is regulated through Bylaws that intend to balance the interests of data contributors and data users. The current version (v. 1.00) contains data for approximately 170,000 plots of different sizes and 2,800 nested-plot series. The key components are richness data and metadata. However, most included datasets also encompass compositional data. About 14,000 plots have near-complete records of terricolous bryophytes and lichens in addition to vascular plants. At present, GrassPlot contains data from 36 countries throughout the Palaearctic, spread across elevational gradients and major grassland types. GrassPlot with its multi-scale and multi-taxon focus complements the larger international vegetationplot databases, such as the European Vegetation Archive (EVA) and the global database " sPlot". Its main aim is to facilitate studies on the scale-and taxon-dependency of biodiversity patterns and drivers along macroecological gradients. GrassPlot is a dynamic database and will expand through new data collection coordinated by the elected Governing Board. We invite researchers with suitable data to join GrassPlot. Researchers with project ideas addressable with GrassPlot data are welcome to submit proposals to the Governing Board.
The cover of large trees in African savannahs is rapidly declining, mainly due to human land-use practices. Trees improve grass nutrient quality and contribute to species and structural diversity of savannah vegetation. However, the response of herbivores to trees as habitat features is unknown We quantified the habitat use of wild and domestic ungulates in two eastern and southern African savannahs. We assessed grazing intensities and quantified dung depositions beneath and around canopies of different sized trees. Grasses were eaten and dung was deposited twice as frequently beneath large (ca. 5 m in height) and very large trees (7-10 m) than in open grasslands. Small trees (<2.5 m) did not show this trend. Grazing intensity and dung deposition decreased with distance away from trees at both study sites. These results suggest that large trees represent essential habitat features for domestic and wild herbivores. Increased dung depositions beneath large trees may further promote the maintenance of a patchy nutrient distribution in savannahs. Small trees cannot provide the same structural and functional advantages as large trees do. We recommend that land-use practices be promoted which conserve large single-standing trees to benefit the flora and fauna of African savannahs.
Drylands worldwide are exposed to a highly variable environment and face a high risk of degradation. The effects of global climate change such as altered precipitation patterns and increased temperature leading to reduced water availability will likely increase this risk. At the same time, an elevated atmospheric CO2 level could mitigate the effects of reduced water availability by increasing the water use efficiency of plants. To prevent degradation of drylands, it is essential to understand the underlying processes that affect water availability and vegetation cover. Since water and vegetation are strongly interdependent in water-limited ecosystems, changes can lead to highly non- linear effects. We assess these effects by developing an ecohydrological model of soil moisture and vegetation cover. The water component of the model simulates the daily dynamics of surface water and water contents in two soil layers. Vegetation is represented by two functional types: shrubs and grasses. These compete for soil water and strongly influence hydrological processes. We apply the model to a Namibian thornbush savanna and evaluate the separate and combined effects of decreased annual precipitation, increased temperature, more variable precipitation and elevated atmospheric CO2 on soil moisture and on vegetation cover. The results show that two main factors control the response of plant types towards climate change, namely a change in water availability and a change in water allocation to a specific plant type. Especially, reduced competitiveness of grasses can lead to a higher risk of shrub encroachment in these systems.