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- Jurkat cells (2)
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Institute
Most of the matter in the universe consists of hydrogen. The hydrogen in the intergalactic medium (IGM), the matter between the galaxies, underwent a change of its ionisation state at the epoch of reionisation, at a redshift roughly between 6>z>10, or ~10^8 years after the Big Bang. At this time, the mostly neutral hydrogen in the IGM was ionised but the source of the responsible hydrogen ionising emission remains unclear. In this thesis I discuss the most likely candidates for the emission of this ionising radiation, which are a type of galaxy called Lyman alpha emitters (LAEs). As implied by their name, they emit Lyman alpha radiation, produced after a hydrogen atom has been ionised and recombines with a free electron. The ionising radiation itself (also called Lyman continuum emission) which is needed for this process inside the LAEs could also be responsible for ionising the IGM around those galaxies at the epoch of reionisation, given that enough Lyman continuum escapes. Through this mechanism, Lyman alpha and Lyman continuum radiation are closely linked and are both studied to better understand the properties of high redshift galaxies and the reionisation state of the universe.
Before I can analyse their Lyman alpha emission lines and the escape of Lyman continuum emission from them, the first step is the detection and correct classification of LAEs in integral field spectroscopic data, specifically taken with the Multi-Unit Spectroscopic Explorer (MUSE). After detecting emission line objects in the MUSE data, the task of classifying them and determining their redshift is performed with the graphical user interface QtClassify, which I developed during the work on this thesis. It uses the strength of the combination of spectroscopic and photometric information that integral field spectroscopy offers to enable the user to quickly identify the nature of the detected emission lines. The reliable classification of LAEs and determination of their redshifts is a crucial first step towards an analysis of their properties.
Through radiative transfer processes, the properties of the neutral hydrogen clouds in and around LAEs are imprinted on the shape of the Lyman alpha line. Thus after identifying the LAEs in the MUSE data, I analyse the properties of the Lyman alpha emission line, such as the equivalent width (EW) distribution, the asymmetry and width of the line as well as the double peak fraction. I challenge the common method of displaying EW distributions as histograms without taking the limits of the survey into account and construct a more independent EW distribution function that better reflects the properties of the underlying population of galaxies. I illustrate this by comparing the fraction of high EW objects between the two surveys MUSE-Wide and MUSE-Deep, both consisting of MUSE pointings (each with the size of one square arcminute) of different depths. In the 60 MUSE-Wide fields of one hour exposure time I find a fraction of objects with extreme EWs above EW_0>240A of ~20%, while in the MUSE-Deep fields (9 fields with an exposure time of 10 hours and one with an exposure time of 31 hours) I find a fraction of only ~1%, which is due to the differences in the limiting line flux of the surveys. The highest EW I measure is EW_0 = 600.63 +- 110A, which hints at an unusual underlying stellar population, possibly with a very low metallicity.
With the knowledge of the redshifts and positions of the LAEs detected in the MUSE-Wide survey, I also look for Lyman continuum emission coming from these galaxies and analyse the connection between Lyman continuum emission and Lyman alpha emission. I use ancillary Hubble Space Telescope (HST) broadband photometry in the bands that contain the Lyman continuum and find six Lyman continuum leaker candidates. To test whether the Lyman continuum emission of LAEs is coming only from those individual objects or the whole population, I select LAEs that are most promising for the detection of Lyman continuum emission, based on their rest-frame UV continuum and Lyman alpha line shape properties. After this selection, I stack the broadband data of the resulting sample and detect a signal in Lyman continuum with a significance of S/N = 5.5, pointing towards a Lyman continuum escape fraction of ~80%. If the signal is reliable, it strongly favours LAEs as the providers of the hydrogen ionising emission at the epoch of reionisation and beyond.
In this paper, we investigate the continuous version of modified iterative Runge–Kutta-type methods for nonlinear inverse ill-posed problems proposed in a previous work. The convergence analysis is proved under the tangential cone condition, a modified discrepancy principle, i.e., the stopping time T is a solution of ∥𝐹(𝑥𝛿(𝑇))−𝑦𝛿∥=𝜏𝛿+ for some 𝛿+>𝛿, and an appropriate source condition. We yield the optimal rate of convergence.
Hyperspectral remote sensing of the spatial and temporal heterogeneity of low Arctic vegetation
(2019)
Arctic tundra ecosystems are experiencing warming twice the global average and Arctic vegetation is responding in complex and heterogeneous ways. Shifting productivity, growth, species composition, and phenology at local and regional scales have implications for ecosystem functioning as well as the global carbon and energy balance. Optical remote sensing is an effective tool for monitoring ecosystem functioning in this remote biome. However, limited field-based spectral characterization of the spatial and temporal heterogeneity limits the accuracy of quantitative optical remote sensing at landscape scales. To address this research gap and support current and future satellite missions, three central research questions were posed:
• Does canopy-level spectral variability differ between dominant low Arctic vegetation communities and does this variability change between major phenological phases?
• How does canopy-level vegetation colour images recorded with high and low spectral resolution devices relate to phenological changes in leaf-level photosynthetic pigment concentrations?
• How does spatial aggregation of high spectral resolution data from the ground to satellite scale influence low Arctic tundra vegetation signatures and thereby what is the potential of upcoming hyperspectral spaceborne systems for low Arctic vegetation characterization?
To answer these questions a unique and detailed database was assembled. Field-based canopy-level spectral reflectance measurements, nadir digital photographs, and photosynthetic pigment concentrations of dominant low Arctic vegetation communities were acquired at three major phenological phases representing early, peak and late season. Data were collected in 2015 and 2016 in the Toolik Lake Research Natural Area located in north central Alaska on the North Slope of the Brooks Range. In addition to field data an aerial AISA hyperspectral image was acquired in the late season of 2016. Simulations of broadband Sentinel-2 and hyperspectral Environmental and Mapping Analysis Program (EnMAP) satellite reflectance spectra from ground-based reflectance spectra as well as simulations of EnMAP imagery from aerial hyperspectral imagery were also obtained.
Results showed that canopy-level spectral variability within and between vegetation communities differed by phenological phase. The late season was identified as the most discriminative for identifying many dominant vegetation communities using both ground-based and simulated hyperspectral reflectance spectra. This was due to an overall reduction in spectral variability and comparable or greater differences in spectral reflectance between vegetation communities in the visible near infrared spectrum.
Red, green, and blue (RGB) indices extracted from nadir digital photographs and pigment-driven vegetation indices extracted from ground-based spectral measurements showed strong significant relationships. RGB indices also showed moderate relationships with chlorophyll and carotenoid pigment concentrations. The observed relationships with the broadband RGB channels of the digital camera indicate that vegetation colour strongly influences the response of pigment-driven spectral indices and digital cameras can track the seasonal development and degradation of photosynthetic pigments.
Spatial aggregation of hyperspectral data from the ground to airborne, to simulated satel-lite scale was influenced by non-photosynthetic components as demonstrated by the distinct shift of the red edge to shorter wavelengths. Correspondence between spectral reflectance at the three scales was highest in the red spectrum and lowest in the near infra-red. By artificially mixing litter spectra at different proportions to ground-based spectra, correspondence with aerial and satellite spectra increased. Greater proportions of litter were required to achieve correspondence at the satellite scale.
Overall this thesis found that integrating multiple temporal, spectral, and spatial data is necessary to monitor the complexity and heterogeneity of Arctic tundra ecosystems. The identification of spectrally similar vegetation communities can be optimized using non-peak season hyperspectral data leading to more detailed identification of vegetation communities. The results also highlight the power of vegetation colour to link ground-based and satellite data. Finally, a detailed characterization non-photosynthetic ecosystem components is crucial for accurate interpretation of vegetation signals at landscape scales.
The knowledge of transformation pathways and identification of transformation products (TPs) of veterinary drugs is important for animal health, food, and environmental matters. The active agent Monensin (MON) belongs to the ionophore antibiotics and is widely used as a veterinary drug against coccidiosis in broiler farming. However, no electrochemically (EC) generated TPs of MON have been described so far. In this study, the online coupling of EC and mass spectrometry (MS) was used for the generation of oxidative TPs. EC-conditions were optimized with respect to working electrode material, solvent, modifier, and potential polarity. Subsequent LC/HRMS (liquid+ chromatography/high resolution mass spectrometry) and MS/MS experiments were performed to identify the structures of derived TPs by a suspected target analysis. The obtained EC-results were compared to TPs observed in metabolism tests with microsomes and hydrolysis experiments of MON. Five previously undescribed TPs of MON were identified in our EC/MS based study and one TP, which was already known from literature and found by a microsomal assay, could be confirmed. Two and three further TPs were found as products in microsomal tests and following hydrolysis, respectively. We found decarboxylation, O-demethylation and acid-catalyzed ring-opening reactions to be the major mechanisms of MON transformation
The knowledge of transformation pathways and identification of transformation products (TPs) of veterinary drugs is important for animal health, food, and environmental matters. The active agent Monensin (MON) belongs to the ionophore antibiotics and is widely used as a veterinary drug against coccidiosis in broiler farming. However, no electrochemically (EC) generated TPs of MON have been described so far. In this study, the online coupling of EC and mass spectrometry (MS) was used for the generation of oxidative TPs. EC-conditions were optimized with respect to working electrode material, solvent, modifier, and potential polarity. Subsequent LC/HRMS (liquid chromatography/high resolution mass spectrometry) and MS/MS experiments were performed to identify the structures of derived TPs by a suspected target analysis. The obtained EC-results were compared to TPs observed in metabolism tests with microsomes and hydrolysis experiments of MON. Five previously undescribed TPs of MON were identified in our EC/MS based study and one TP, which was already known from literature and found by a microsomal assay, could be confirmed. Two and three further TPs were found as products in microsomal tests and following hydrolysis, respectively. We found decarboxylation, O-demethylation and acid-catalyzed ring-opening reactions to be the major mechanisms of MON transformation.
Topologische Datenanalyse
(2019)
Bei der Analyse von höherdimensionalen Daten kann deren Gestalt wichtige Informationen über den Datensatz liefern. Bei einer gegebenen Punktwolke, die aus einem unbekannten topologischen Raum ausgewählt wurde, versucht die Topologische Datenanalyse (TDA) den ursprünglichen Raum zu rekonstruieren. Dieser Beitrag soll eine Einführung in die Topologische Datenanalyse geben und konzentriert sich dabei auf zwei wichtige Aspekte: die Persistente Homologie und den Mapper. Dabei werden zuerst die notwendigen theoretischen Grundlagen vorgestellt und anschließend wird die Methodik bei der Visualisierung von Daten eingesetzt.
Die Persistente Homologie ist eines der Standardwerkzeuge in der TDA. Sie findet ihre Anwendung beispielsweise in den Bereichen Formerkennung und -beschreibung. Der Mapper als zweites wichtiges Konzept der TDA wandelt umfangreiche, höherdimensionale Datensätze in Simplizialkomplexe um und kann dadurch geometrische und topologische Eigenschaften der Daten bestimmen. Des Weiteren ist die Mapper-Methode ein brauchbares Werkzeug zur Visualisierungen von mehrdimensionalen Daten, woran statistische Verfahren scheitern.
Permettez à l’inventeur du manuscrit dont vous avez l’édition diplomatique sous les yeux d’exposer en exergue les principales étapes qui ont conduit en 2012 à la détermination de la langue et à l’identification de l’auteur.
Étant inscrit à la conférence de linguistique missionnaire à l’université de Brème en mars 2012 et conscient que maintes bibliothèques et archives renferment des trésors non identifiés ou mal catalogués, je suivis le conseil d’un collègue de la bibliothèque de l’université de Trèves, Hans-Ulrich Seiffert, d’inspecter le manuscrit 1136 / 2048 4° de la bibliothèque municipale de Trèves. Cette bibliothèque est riche de plus de 2.500 manuscrits et incunables provenant pour la plupart des saisies révolutionnaires françaises dans les bibliothèques des ci-devant couvents trévirois. Parmi ces trésors un manuscrit portugais des missions qui était rentré dans les fonds de la bibliothèque de Trèves dès 1799 et avait été exposé en 1991 dans le cadre d’une évocation des activités missionnaires globales des Jésuites. Michael Embach, alors directeur de la bibliothèque du séminaire épiscopal de Trèves, l’avait brièvement décrit dans une notice qui prétendait qu’il était rédigé en espagnol et en portugais et avait peut-être été composé par un auteur « Meirin » dans le cadre de ses préparations pour partir dans les missions… Dans ma copie du catalogue de 1991 se trouve inscrit « la langue reste à déterminer ».
J’allais résoudre le mystère en cette mémorable journée du jeudi 23 février 2012 quand je me résolus à l’autopsier dans la salle désormais historique de la Bibliothèque municipale de Trèves, dirigée depuis peu par le collègue Embach. Il parut à l’évidence que le manuscrit ne contenait aucun mot d’espagnol mais que dans la première partie, les entrées en portugais, strictement numérotées et arrangées dans l’ordre alphabétique, étaient suivies par leurs équivalences dans une langue inconnue qui, cependant, avait pour un linguiste une forte odeur de l’Amérique amazonienne. La partie postérieure du manuscrit présentait l’arrangement inverse. Les entrées dans la langue inconnue étaient suivies de leurs équivalences portugaises. Ce n’est que plus tard que nous avons compris le mystérieux ordre des lemmata dans cette partie, basée qu’elle est sur la rime finale des mots.
Deux facteurs ont grandement facilité l’identification de la langue inconnue : 1. la permission du directeur Embach de pouvoir prendre des photos de travail de tous les folios du manuscrit et 2. l’entrée dans le premier catalogue de la Bibliothèque de Trèves de 1802 : “Codex maxime memorabiblis est, cum nondum grammatica praeter Lusitani Anchieta nota sit, et nullum vocabularium huius linguae existet. Sine dubio scriptum est a quodam Missionario Jesuita”.
Rentrant de Trèves chez moi, je fis une brève halte dans mon bureau d’alors pour consulter Internet. L’entrée “Anchieta” dans l’encyclopédie électronique Wikipedia m’informait que ce jésuite portugais avait composé une grammaire du Vieux Tupi, publiée en 1595. Sous le vocable “Old Tupi” ensuite, j’appris que l’auto-désignation pour cette langue est ñeengatú (la bonne langue, le parler correct). De là à retrouver au folio 25 de mes photos la traduction du portugais linguagem par nheénga ne prit que quelques minutes. Dès ce premier soir donc, le mystère de la langue inconnue était résolu!
Un projet de recherche international, voire transcontinental allait se mettre peu à peu en place après. À la conférence de Brème, début mars 2012, je fis la connaissance du linguiste et romaniste, le professeur Wolf Dietrich de l’université de Münster en Westphalie, un des meilleurs connaisseurs des parlers amazoniens. Il rentrait avec une copie de mes photos de travail et confirma bientôt l’importance du manuscrit de Trèves pour la connaissance de la Lingua Geral, le parler qui s’était développé à partir du Vieux Tupi moribond.
Je communiquai également ma découverte au frère Karl-Heinz Arenz de la congrégation des pères de Steyl, originaire de l’Eifel allemande et enseignant d’histoire aux universités brésiliennes de Belém et de Santarém dans l’État du Pará. Arenz est l’auteur d’une étude sur le jésuite luxembourgeois Jean-Philippe Bettendorf, actif au Maranhão dans la seconde moitié du XVIIe siècle. Nous avions collaboré en 2007 à une exposition didactique consacrée à ce personnage. Arenz ne tarda pas à passer l’information sur le manuscrit de Trèves aux deux linguistes brésiliennes Cândida Barros et Ruth Monserrat, qui à leur tour présentaient un projet de recherche qui fut accepté par les autorités brésiliennes. Les reals de ce subside furent bien investis en effet : l’étudiant doctoral Gabriel Prudente réalisa une transcription intégrale du manuscrit de Trèves qui fit apparaître des couches dialectales et sociolectales dans le texte, et même quelques mots allemands. La bibliothèque municipale de Trèves, quant à elle, contribua « en nature » les images digitales qui sont consultables sur les pages de gauche de cette édition électronique.
Début avril 2014, nous fîmes tous connaissance personnellement dans le cadre d’un colloque à l’université de Belém où fut décidée la présente édition digitale et où furent prononcées la plupart des contributions scientifiques que vous pouvez lire en guise d’introduction. Restait à percer l’énigme du véritable auteur du manuscrit. Cândida Barros avait assez tôt proposé les noms de trois Jésuites allemands, actifs dans les années 1750 dans la région du fleuve Xingu et chassés par les mesures anti-jésuites du pouvoir portugais en 1756. L’étude paléographique des Quattuor vota des trois candidats, aux archives centrales des Jésuites à Rome, me permit début septembre 2015 d’éliminer les pères Eckart et Kaulen et de ne retenir que Antonius Meisterburg, originaire de Bernkastel sur la Moselle, comme le scribe du manuscrit de Trèves. Qu’il me soit permis d’exprimer ma GRATITUDE à toutes celles et à tous ceux qui ont contribué à cette belle aventure de découverte intellectuelle et scientifique et à rendre au Brésil une petite pierre de son histoire.
Vom Monomer zum Glykopolymer
(2019)
Glykopolymere sind synthetische und natürlich vorkommende Polymere, die eine Glykaneinheit in der Seitenkette des Polymers tragen. Glykane sind durch die Glykan-Protein-Wechselwirkung verantwortlich für viele biologische Prozesse. Die Beteiligung der Glykanen in diesen biologischen Prozessen ermöglicht das Imitieren und Analysieren der Wechselwirkungen durch geeignete Modellverbindungen, z.B. der Glykopolymere. Dieses System der Glykan-Protein-Wechselwirkung soll durch die Glykopolymere untersucht und studiert werden, um die spezifische und selektive Bindung der Proteine an die Glykopolymere nachzuweisen. Die Proteine, die in der Lage sind, Kohlenhydratstrukturen selektiv zu binden, werden Lektine genannt.
In dieser Dissertationsarbeit wurden verschiedene Glykopolymere synthetisiert. Dabei sollte auf einen effizienten und kostengünstigen Syntheseweg geachtet werden.
Verschiedene Glykopolymere wurden durch funktionalisierte Monomere mit verschiedenen Zuckern, wie z.B. Mannose, Laktose, Galaktose oder N-Acetyl-Glukosamin als funktionelle Gruppe, hergestellt. Aus diesen funktionalisierten Glykomonomeren wurden über ATRP und RAFT-Polymerisation Glykopolymere synthetisiert.
Die erhaltenen Glykopolymere wurden in Diblockcopolymeren als hydrophiler Block angewendet und die Selbstassemblierung in wässriger Lösung untersucht. Die Polymere formten in wässriger Lösung Mizellen, bei denen der Zuckerblock an der Oberfläche der Mizellen sitzt. Die Mizellen wurden mit einem hydrophoben Fluoreszenzfarbstoff beladen, wodurch die CMC der Mizellenbildung bestimmt werden konnte.
Außerdem wurden die Glykopolymere als Oberflächenbeschichtung über „Grafting from“ mit SI-ATRP oder über „Grafting to“ auf verschiedene Oberflächen gebunden. Durch die glykopolymerbschichteten Oberflächen konnte die Glykan Protein Wechselwirkung über spektroskopische Messmethoden, wie SPR- und Mikroring Resonatoren untersucht werden. Hierbei wurde die spezifische und selektive Bindung der Lektine an die Glykopolymere nachgewiesen und die Bindungsstärke untersucht.
Die synthetisierten Glykopolymere könnten durch Austausch der Glykaneinheit für andere Lektine adressierbar werden und damit ein weites Feld an anderen Proteinen erschließen. Die bioverträglichen Glykopolymere wären alternativen für den Einsatz in biologischen Prozessen als Transporter von Medikamenten oder Farbstoffe in den Körper. Außerdem könnten die funktionalisierten Oberflächen in der Diagnostik zum Erkennen von Lektinen eingesetzt werden. Die Glykane, die keine selektive und spezifische Bindung zu Proteinen eingehen, könnten als antiadsorptive Oberflächenbeschichtung z.B. in der Zellbiologie eingesetzt werden.
Expanding public or publicly subsidized childcare has been a top social policy priority in many industrialized countries. It is supposed to increase fertility, promote children’s development and enhance mothers’ labor market attachment. In this paper, we analyze the causal effect of one of the largest expansions of subsidized childcare for children up to three years among industrialized countries on the employment of mothers in Germany. Identification is based on spatial and temporal variation in the expansion of publicly subsidized childcare triggered by two comprehensive childcare policy reforms. The empirical analysis is based on the German Microcensus that is matched to county level data on childcare availability. Based on our preferred specification which includes time and county fixed effects we find that an increase in childcare slots by one percentage point increases mothers’ labor market participation rate by 0.2 percentage points. The overall increase in employment is explained by the rise in part-time employment with relatively long hours (20-35 hours per week). We do not find a change in full-time employment or lower part-time employment that is causally related to the childcare expansion. The effect is almost entirely driven by mothers with medium-level qualifications. Mothers with low education levels do not profit from this reform calling for a stronger policy focus on particularly disadvantaged groups in coming years.