Refine
Year of publication
Document Type
- Article (15)
- Monograph/Edited Volume (9)
Language
- English (24)
Is part of the Bibliography
- yes (24)
Keywords
- data profiling (4)
- Datenintegration (3)
- duplicate detection (3)
- similarity measures (3)
- Data Integration (2)
- Functional dependencies (2)
- data matching (2)
- data quality (2)
- data wrangling (2)
- entity resolution (2)
Institute
- Hasso-Plattner-Institut für Digital Engineering gGmbH (24) (remove)
Data Preparation
(2020)
Raw data are often messy: they follow different encodings, records are not well structured, values do not adhere to patterns, etc. Such data are in general not fit to be ingested by downstream applications, such as data analytics tools, or even by data management systems. The act of obtaining information from raw data relies on some data preparation process. Data preparation is integral to advanced data analysis and data management, not only for data science but for any data-driven applications. Existing data preparation tools are operational and useful, but there is still room for improvement and optimization. With increasing data volume and its messy nature, the demand for prepared data increases day by day. <br /> To cater to this demand, companies and researchers are developing techniques and tools for data preparation. To better understand the available data preparation systems, we have conducted a survey to investigate (1) prominent data preparation tools, (2) distinctive tool features, (3) the need for preliminary data processing even for these tools and, (4) features and abilities that are still lacking. We conclude with an argument in support of automatic and intelligent data preparation beyond traditional and simplistic techniques.
Matching dependencies (MDs) are data profiling results that are often used for data integration, data cleaning, and entity matching. They are a generalization of functional dependencies (FDs) matching similar rather than same elements. As their discovery is very difficult, existing profiling algorithms find either only small subsets of all MDs or their scope is limited to only small datasets.
We focus on the efficient discovery of all interesting MDs in real-world datasets. For this purpose, we propose HyMD, a novel MD discovery algorithm that finds all minimal, non-trivial MDs within given similarity boundaries. The algorithm extracts the exact similarity thresholds for the individual MDs from the data instead of using predefined similarity thresholds. For this reason, it is the first approach to solve the MD discovery problem in an exact and truly complete way. If needed, the algorithm can, however, enforce certain properties on the reported MDs, such as disjointness and minimum support, to focus the discovery on such results that are actually required by downstream use cases. HyMD is technically a hybrid approach that combines the two most popular dependency discovery strategies in related work: lattice traversal and inference from record pairs. Despite the additional effort of finding exact similarity thresholds for all MD candidates, the algorithm is still able to efficiently process large datasets, e.g., datasets larger than 3 GB.
This paper shows that the law, in subtle ways, may set hitherto unrecognized incentives for the adoption of explainable machine learning applications. In doing so, we make two novel contributions. First, on the legal side, we show that to avoid liability, professional actors, such as doctors and managers, may soon be legally compelled to use explainable ML models. We argue that the importance of explainability reaches far beyond data protection law, and crucially influences questions of contractual and tort liability for the use of ML models. To this effect, we conduct two legal case studies, in medical and corporate merger applications of ML. As a second contribution, we discuss the (legally required) trade-off between accuracy and explainability and demonstrate the effect in a technical case study in the context of spam classification.
Duplicate detection algorithms produce clusters of database records, each cluster representing a single real-world entity. As most of these algorithms use pairwise comparisons, the resulting (transitive) clusters can be inconsistent: Not all records within a cluster are sufficiently similar to be classified as duplicate. Thus, one of many subsequent clustering algorithms can further improve the result. <br /> We explain in detail, compare, and evaluate many of these algorithms and introduce three new clustering algorithms in the specific context of duplicate detection. Two of our three new algorithms use the structure of the input graph to create consistent clusters. Our third algorithm, and many other clustering algorithms, focus on the edge weights, instead. For evaluation, in contrast to related work, we experiment on true real-world datasets, and in addition examine in great detail various pair-selection strategies used in practice. While no overall winner emerges, we are able to identify best approaches for different situations. In scenarios with larger clusters, our proposed algorithm, Extended Maximum Clique Clustering (EMCC), and Markov Clustering show the best results. EMCC especially outperforms Markov Clustering regarding the precision of the results and additionally has the advantage that it can also be used in scenarios where edge weights are not available.
Roughly every third Wikipedia article contains an infobox - a table that displays important facts about the subject in attribute-value form. The schema of an infobox, i.e., the attributes that can be expressed for a concept, is defined by an infobox template. Often, authors do not specify all template attributes, resulting in incomplete infoboxes. With iPopulator, we introduce a system that automatically populates infoboxes of Wikipedia articles by extracting attribute values from the article's text. In contrast to prior work, iPopulator detects and exploits the structure of attribute values for independently extracting value parts. We have tested iPopulator on the entire set of infobox templates and provide a detailed analysis of its effectiveness. For instance, we achieve an average extraction precision of 91% for 1,727 distinct infobox template attributes.
Data obtained from foreign data sources often come with only superficial structural information, such as relation names and attribute names. Other types of metadata that are important for effective integration and meaningful querying of such data sets are missing. In particular, relationships among attributes, such as foreign keys, are crucial metadata for understanding the structure of an unknown database. The discovery of such relationships is difficult, because in principle for each pair of attributes in the database each pair of data values must be compared. A precondition for a foreign key is an inclusion dependency (IND) between the key and the foreign key attributes. We present with Spider an algorithm that efficiently finds all INDs in a given relational database. It leverages the sorting facilities of DBMS but performs the actual comparisons outside of the database to save computation. Spider analyzes very large databases up to an order of magnitude faster than previous approaches. We also evaluate in detail the effectiveness of several heuristics to reduce the number of necessary comparisons. Furthermore, we generalize Spider to find composite INDs covering multiple attributes, and partial INDs, which are true INDs for all but a certain number of values. This last type is particularly relevant when integrating dirty data as is often the case in the life sciences domain - our driving motivation.
Unique column combinations (UCCs) are a fundamental concept in relational databases. They identify entities in the data and support various data management activities. Still, UCCs are usually not explicitly defined and need to be discovered. State-of-the-art data profiling algorithms are able to efficiently discover UCCs in moderately sized datasets, but they tend to fail on large and, in particular, on wide datasets due to run time and memory limitations. <br /> In this paper, we introduce HPIValid, a novel UCC discovery algorithm that implements a faster and more resource-saving search strategy. HPIValid models the metadata discovery as a hitting set enumeration problem in hypergraphs. In this way, it combines efficient discovery techniques from data profiling research with the most recent theoretical insights into enumeration algorithms. Our evaluation shows that HPIValid is not only orders of magnitude faster than related work, it also has a much smaller memory footprint.
With the advent of big data and data lakes, data are often integrated from multiple sources. Such integrated data are often of poor quality, due to inconsistencies, errors, and so forth. One way to check the quality of data is to infer functional dependencies (fds). However, in many modern applications it might be necessary to extract properties and relationships that are not captured through fds, due to the necessity to admit exceptions, or to consider similarity rather than equality of data values. Relaxed fds (rfds) have been introduced to meet these needs, but their discovery from data adds further complexity to an already complex problem, also due to the necessity of specifying similarity and validity thresholds. We propose Domino, a new discovery algorithm for rfds that exploits the concept of dominance in order to derive similarity thresholds of attribute values while inferring rfds. An experimental evaluation on real datasets demonstrates the discovery performance and the effectiveness of the proposed algorithm.
Effective query optimization is a core feature of any database management system. While most query optimization techniques make use of simple metadata, such as cardinalities and other basic statistics, other optimization techniques are based on more advanced metadata including data dependencies, such as functional, uniqueness, order, or inclusion dependencies. This survey provides an overview, intuitive descriptions, and classifications of query optimization and execution strategies that are enabled by data dependencies. We consider the most popular types of data dependencies and focus on optimization strategies that target the optimization of relational database queries. The survey supports database vendors to identify optimization opportunities as well as DBMS researchers to find related work and open research questions.
The task of expert finding is to rank the experts in the search space given a field of expertise as an input query. In this paper, we propose a topic modeling approach for this task. The proposed model uses latent Dirichlet allocation (LDA) to induce probabilistic topics. In the first step of our algorithm, the main topics of a document collection are extracted using LDA. The extracted topics present the connection between expert candidates and user queries. In the second step, the topics are used as a bridge to find the probability of selecting each candidate for a given query. The candidates are then ranked based on these probabilities. The experimental results on the Text REtrieval Conference (TREC) Enterprise track for 2005 and 2006 show that the proposed topic-based approach outperforms the state-of-the-art profile- and document-based models, which use information retrieval methods to rank experts. Moreover, we present the superiority of the proposed topic-based approach to the improved document-based expert finding systems, which consider additional information such as local context, candidate prior, and query expansion.
Extract-Transform-Load (ETL) tools are used for the creation, maintenance, and evolution of data warehouses, data marts, and operational data stores. ETL workflows populate those systems with data from various data sources by specifying and executing a DAG of transformations. Over time, hundreds of individual workflows evolve as new sources and new requirements are integrated into the system. The maintenance and evolution of large-scale ETL systems requires much time and manual effort. A key problem is to understand the meaning of unfamiliar attribute labels in source and target databases and ETL transformations. Hard-to-understand attribute labels lead to frustration and time spent to develop and understand ETL workflows. We present a schema decryption technique to support ETL developers in understanding cryptic schemata of sources, targets, and ETL transformations. For a given ETL system, our recommender-like approach leverages the large number of mapped attribute labels in existing ETL workflows to produce good and meaningful decryptions. In this way we are able to decrypt attribute labels consisting of a number of unfamiliar few-letter abbreviations, such as UNP_PEN_INT, which we can decrypt to UNPAID_PENALTY_INTEREST. We evaluate our schema decryption approach on three real-world repositories of ETL workflows and show that our approach is able to suggest high-quality decryptions for cryptic attribute labels in a given schema.
Data dependencies, or integrity constraints, are used to improve the quality of a database schema, to optimize queries, and to ensure consistency in a database. In the last years conditional dependencies have been introduced to analyze and improve data quality. In short, a conditional dependency is a dependency with a limited scope defined by conditions over one or more attributes. Only the matching part of the instance must adhere to the dependency. In this paper we focus on conditional inclusion dependencies (CINDs). We generalize the definition of CINDs, distinguishing covering and completeness conditions. We present a new use case for such CINDs showing their value for solving complex data quality tasks. Further, we define quality measures for conditions inspired by precision and recall. We propose efficient algorithms that identify covering and completeness conditions conforming to given quality thresholds. Our algorithms choose not only the condition values but also the condition attributes automatically. Finally, we show that our approach efficiently provides meaningful and helpful results for our use case.
Duplicate detection consists in determining different representations of real-world objects in a database. Recent research has considered the use of relationships among object representations to improve duplicate detection. In the general case where relationships form a graph, research has mainly focused on duplicate detection quality/effectiveness. Scalability has been neglected so far, even though it is crucial for large real-world duplicate detection tasks. In this paper we scale up duplicate detection in graph data (DDG) to large amounts of data and pairwise comparisons, using the support of a relational database system. To this end, we first generalize the process of DDG. We then present how to scale algorithms for DDG in space (amount of data processed with limited main memory) and in time. Finally, we explore how complex similarity computation can be performed efficiently. Experiments on data an order of magnitude larger than data considered so far in DDG clearly show that our methods scale to large amounts of data not residing in main memory.
How inclusive are we?
(2022)
ACM SIGMOD, VLDB and other database organizations have committed to fostering an inclusive and diverse community, as do many other scientific organizations. Recently, different measures have been taken to advance these goals, especially for underrepresented groups. One possible measure is double-blind reviewing, which aims to hide gender, ethnicity, and other properties of the authors. <br /> We report the preliminary results of a gender diversity analysis of publications of the database community across several peer-reviewed venues, and also compare women's authorship percentages in both single-blind and double-blind venues along the years. We also obtained a cross comparison of the obtained results in data management with other relevant areas in Computer Science.
Spreadsheets are among the most commonly used file formats for data management, distribution, and analysis. Their widespread employment makes it easy to gather large collections of data, but their flexible canvas-based structure makes automated analysis difficult without heavy preparation. One of the common problems that practitioners face is the presence of multiple, independent regions in a single spreadsheet, possibly separated by repeated empty cells. We define such files as "multiregion" files. In collections of various spreadsheets, we can observe that some share the same layout. We present the Mondrian approach to automatically identify layout templates across multiple files and systematically extract the corresponding regions. Our approach is composed of three phases: first, each file is rendered as an image and inspected for elements that could form regions; then, using a clustering algorithm, the identified elements are grouped to form regions; finally, every file layout is represented as a graph and compared with others to find layout templates. We compare our method to state-of-the-art table recognition algorithms on two corpora of real-world enterprise spreadsheets. Our approach shows the best performances in detecting reliable region boundaries within each file and can correctly identify recurring layouts across files.
Design and Implementation of service-oriented architectures imposes a huge number of research questions from the fields of software engineering, system analysis and modeling, adaptability, and application integration. Component orientation and web services are two approaches for design and realization of complex web-based system. Both approaches allow for dynamic application adaptation as well as integration of enterprise application. Commonly used technologies, such as J2EE and .NET, form de facto standards for the realization of complex distributed systems. Evolution of component systems has lead to web services and service-based architectures. This has been manifested in a multitude of industry standards and initiatives such as XML, WSDL UDDI, SOAP, etc. All these achievements lead to a new and promising paradigm in IT systems engineering which proposes to design complex software solutions as collaboration of contractually defined software services. Service-Oriented Systems Engineering represents a symbiosis of best practices in object-orientation, component-based development, distributed computing, and business process management. It provides integration of business and IT concerns. The annual Ph.D. Retreat of the Research School provides each member the opportunity to present his/her current state of their research and to give an outline of a prospective Ph.D. thesis. Due to the interdisciplinary structure of the Research Scholl, this technical report covers a wide range of research topics. These include but are not limited to: Self-Adaptive Service-Oriented Systems, Operating System Support for Service-Oriented Systems, Architecture and Modeling of Service-Oriented Systems, Adaptive Process Management, Services Composition and Workflow Planning, Security Engineering of Service-Based IT Systems, Quantitative Analysis and Optimization of Service-Oriented Systems, Service-Oriented Systems in 3D Computer Graphics sowie Service-Oriented Geoinformatics.
The integration of multiple data sources is a common problem in a large variety of applications. Traditionally, handcrafted similarity measures are used to discover, merge, and integrate multiple representations of the same entity-duplicates-into a large homogeneous collection of data. Often, these similarity measures do not cope well with the heterogeneity of the underlying dataset. In addition, domain experts are needed to manually design and configure such measures, which is both time-consuming and requires extensive domain expertise. <br /> We propose a deep Siamese neural network, capable of learning a similarity measure that is tailored to the characteristics of a particular dataset. With the properties of deep learning methods, we are able to eliminate the manual feature engineering process and thus considerably reduce the effort required for model construction. In addition, we show that it is possible to transfer knowledge acquired during the deduplication of one dataset to another, and thus significantly reduce the amount of data required to train a similarity measure. We evaluated our method on multiple datasets and compare our approach to state-of-the-art deduplication methods. Our approach outperforms competitors by up to +26 percent F-measure, depending on task and dataset. In addition, we show that knowledge transfer is not only feasible, but in our experiments led to an improvement in F-measure of up to +4.7 percent.
Unique column combinations of a relational database table are sets of columns that contain only unique values. Discovering such combinations is a fundamental research problem and has many different data management and knowledge discovery applications. Existing discovery algorithms are either brute force or have a high memory load and can thus be applied only to small datasets or samples. In this paper, the wellknown GORDIAN algorithm and "Apriori-based" algorithms are compared and analyzed for further optimization. We greatly improve the Apriori algorithms through efficient candidate generation and statistics-based pruning methods. A hybrid solution HCAGORDIAN combines the advantages of GORDIAN and our new algorithm HCA, and it significantly outperforms all previous work in many situations.
Entity resolution on-demand
(2022)
Entity Resolution (ER) aims to identify and merge records that refer to the same real-world entity.
ER is typically employed as an expensive cleaning step on the entire data before consuming it. Yet, determining which entities are useful once cleaned depends solely on the user's application, which may need only a fraction of them.
For instance, when dealing with Web data, we would like to be able to filter the entities of interest gathered from multiple sources without cleaning the entire, continuously-growing data.
Similarly, when querying data lakes, we want to transform data on-demand and return the results in a timely manner-a fundamental requirement of ELT (Extract-Load-Transform) pipelines.
We propose BrewER, a framework to evaluate SQL SP queries on dirty data while progressively returning results as if they were issued on cleaned data. BrewER tries to focus the cleaning effort on one entity at a time, following an ORDER BY predicate. Thus, it inherently supports top-k and stop-and-resume execution.
For a wide range of applications, a significant amount of resources can be saved. We exhaustively evaluate and show the efficacy of BrewER on four real-world datasets.