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Background and Aims Dynamic processes occurring at the soil-root interface crucially influence soil physical, chemical and biological properties at a local scale around the roots, and are technically challenging to capture in situ. This study presents a novel multi-imaging approach combining fluorescence and neutron radiography that is able to simultaneously monitor root growth, water content distribution, root respiration and root exudation.
Methods Germinated seeds of white lupins (Lupinus albus) were planted in boron-free glass rhizotrons. After 11 d, the rhizotrons were wetted from the bottom and time series of fluorescence and neutron images were taken during the subsequent day and night cycles for 13 d. The following day (i.e. 25 d after planting) the rhizotrons were again wetted from the bottom and the measurements were repeated. Fluorescence sensor foils were attached to the inner sides of the glass and measurements of oxygen and pH were made on the basis of fluorescence intensity. The experimental set-up allowed for simultaneous fluorescence imaging and neutron radiography.
Key Results The interrelated patterns of root growth and distribution in the soil, root respiration, exudation and water uptake could all be studied non-destructively and at high temporal and spatial resolution. The older parts of the root system with greater root-length density were associated with fast decreases of water content and rapid changes in oxygen concentration. pH values around the roots located in areas with low soil water content were significantly lower than the rest of the root system.
Conclusions The results suggest that the combined imaging set-up developed here, incorporating fluorescence intensity measurements, is able to map important biogeochemical parameters in the soil around living plants with a spatial resolution that is sufficiently high enough to relate the patterns observed to the root system.
A modern pollen dataset from China and Mongolia (18-52 degrees N, 74-132 degrees E) is investigated for its potential use in climate reconstructions. The dataset includes 2559 samples, 229 terrestrial pollen taxa and four climatic variables - mean annual precipitation (P-ann): 35-2091 mm, mean annual temperature (T-ann): -12.1-25.8 degrees C, mean temperature in the coldest month (Mt(co).): -33.8-21.7 degrees C, and mean temperature in the warmest month (Mt(wa)): 03-29.8 degrees C. Modern pollen-climate relationships are assessed using canonical correspondence analysis (CCA), Huisman-Olff-Fresco (HOF) models, the modern analogue technique (MAT), and weighted averaging partial least squares (WA-PLS). Results indicate that P-ann is the most important climatic determinant of pollen distribution and the most promising climate variable for reconstructions, as assessed by the coefficient of determination between observed and predicted environmental values (r(2)) and root mean square error of prediction (RMSEP). Mt(co) and Mt(wa) may be reconstructed too, but with caution. Samples from different depositional environments influence the performance of cross-validation differently, with samples from lake sediment-surfaces and moss polsters having the best fit with the lowest RMSEP. The better model performances of MAT are most probably caused by spatial autocorrelation. Accordingly, the WA-PLS models of this dataset are deemed most suitable for reconstructing past climate quantitatively because of their more reliable predictive power. (C) 2014 Elsevier B.V. All rights reserved.
Tian, Fang ; Herzschuh, Ulrike ; Telford, Richard J. ; Mischke, Steffen ; Van der Meeren, Thijs ; Krengel, Michael
AimFossil pollen spectra from lake sediments in central and western Mongolia have been used to interpret past climatic variations, but hitherto no suitable modern pollen-climate calibration set has been available to infer past climate changes quantitatively. We established such a modern pollen dataset and used it to develop a transfer function model that we applied to a fossil pollen record in order to investigate: (1) whether there was a significant moisture response to the Younger Dryas event in north-western Mongolia; and (2) whether the early Holocene was characterized by dry or wet climatic conditions.
LocationCentral and western Mongolia.
MethodsWe analysed pollen data from surface sediments from 90 lakes. A transfer function for mean annual precipitation (P-ann) was developed with weighted averaging partial least squares regression (WA-PLS) and applied to a fossil pollen record from Lake Bayan Nuur (49.98 degrees N, 93.95 degrees E, 932m a.s.l.). Statistical approaches were used to investigate the modern pollen-climate relationships and assess model performance and reconstruction output.
ResultsRedundancy analysis shows that the modern pollen spectra are characteristic of their respective vegetation types and local climate. Spatial autocorrelation and significance tests of environmental variables show that the WA-PLS model for P-ann is the most valid function for our dataset, and possesses the lowest root mean squared error of prediction.
Main conclusionsPrecipitation is the most important predictor of pollen and vegetation distributions in our study area. Our quantitative climate reconstruction indicates a dry Younger Dryas, a relatively dry early Holocene, a wet mid-Holocene and a dry late Holocene.
Baeten, Lander ; Warton, David I. ; Van Calster, Hans ; De Frenne, Pieter ; Verstraeten, Gorik ; Bonte, Dries ; Bernhardt-Römermann, Markus ; Cornelis, Johnny ; Decocq, Guillaume ; Eriksson, Ove ; Hedl, Radim ; Heinken, Thilo ; Hermy, Martin ; Hommel, Patrick ; Kirby, Keith J. ; Naaf, Tobias ; Petrik, Petr ; Walther, Gian-Reto ; Wulf, Monica ; Verheyen, Kris
Meier, Patrick ; Kriegel, Hendrik ; Motschmann, Uwe ; Schmidt, Jürgen ; Spahn, Frank ; Hill, Thomas W. ; Dong, Yaxue ; Jones, Geraint H.
Bacteria respond to changing environmental conditions by switching the global pattern of expressed genes. In response to specific environmental stresses the cell activates several stress-specific molecules such as sigma factors. They reversibly bind the RNA polymerase to form the so-called holoenzyme and direct it towards the appropriate stress response genes. In exponentially growing E. coli cells, the majority of the transcriptional activity is carried out by the housekeeping sigma factor, while stress responses are often under the control of alternative sigma factors. Different sigma factors compete for binding to a limited pool of RNA polymerase (RNAP) core enzymes, providing a mechanism for cross talk between genes or gene classes via the sharing of expression machinery. To quantitatively analyze the contribution of sigma factor competition to global changes in gene expression, we develop a thermodynamic model that describes binding between sigma factors and core RNAP at equilibrium, transcription, non-specific binding to DNA and the modulation of the availability of the molecular components.
Association of housekeeping sigma factor to RNAP is generally favored by its abundance and higher binding affinity to the core. In order to promote transcription by alternative sigma subunits, the bacterial cell modulates the transcriptional efficiency in a reversible manner through several strategies such as anti-sigma factors, 6S RNA and generally any kind of transcriptional regulators (e.g. activators or inhibitors). By shifting the outcome of sigma factor competition for the core, these modulators bias the transcriptional program of the cell. The model is validated by comparison with in vitro competition experiments, with which excellent agreement is found. We observe that transcription is affected via the modulation of the concentrations of the different types of holoenzymes, so saturated promoters are only weakly affected by sigma factor competition. However, in case of overlapping promoters or promoters recognized by two types of sigma factors, we find that even saturated promoters are strongly affected.
Active transcription effectively lowers the affinity between the sigma factor driving it and the core RNAP, resulting in complex cross talk effects and raising the question of how their in vitro measure is relevant in the cell. We also estimate that sigma factor competition is not strongly affected by non-specific binding of core RNAPs, sigma factors, and holoenzymes to DNA. Finally, we analyze the role of increased core RNAP availability upon the shut-down of ribosomal RNA transcription during stringent response. We find that passive up-regulation of alternative sigma-dependent transcription is not only possible, but also displays hypersensitivity based on the sigma factor competition. Our theoretical analysis thus provides support for a significant role of passive control during that global switch of the gene expression program and gives new insights into RNAP partitioning in the cell.
We apply and evaluate a recent machine learning method for the automatic classification of seismic waveforms. The method relies on Dynamic Bayesian Networks (DBN) and supervised learning to improve the detection capabilities at 3C seismic stations. A time-frequency decomposition provides the basis for the required signal characteristics we need in order to derive the features defining typical "signal" and "noise" patterns. Each pattern class is modeled by a DBN, specifying the interrelationships of the derived features in the time-frequency plane. Subsequently, the models are trained using previously labeled segments of seismic data. The DBN models can now be compared against in order to determine the likelihood of new incoming seismic waveform segments to be either signal or noise. As the noise characteristics of seismic stations varies smoothly in time (seasonal variation as well as anthropogenic influence), we accommodate in our approach for a continuous adaptation of the DBN model that is associated with the noise class. Given the difficulty for obtaining a golden standard for real data (ground truth) the proof of concept and evaluation is shown by conducting experiments based on 3C seismic data from the International Monitoring Stations, BOSA and LPAZ.
In a recent paper, the Lefschetz number for endomorphisms (modulo trace class operators) of sequences of trace class curvature was introduced. We show that this is a well defined, canonical extension of the classical Lefschetz number and establish the homotopy invariance of this number. Moreover, we apply the results to show that the Lefschetz fixed point formula holds for geometric quasiendomorphisms of elliptic quasicomplexes.
In a recent paper, the Lefschetz number for endomorphisms (modulo trace class operators) of sequences of trace class curvature was introduced. We show that this is a well defined, canonical extension of the classical Lefschetz number and establish the homotopy invariance of this number. Moreover, we apply the results to show that the Lefschetz fixed point formula holds for geometric quasiendomorphisms of elliptic quasicomplexes.
Lacustrine sediments have been widely used to investigate past climatic and environmental changes on millennial to seasonal time scales. Sedimentary archives of lakes in mountainous regions may also record non-climatic events such as earthquakes. We argue herein that a set of 64 annual laminae couplets reconciles a stratigraphically inconsistent accelerator mass spectrometry (AMS) C-14 chronology in a similar to 4-m-long sediment core from Lake Mengda, in the north-eastern Tibetan Plateau. The laminations suggest the lake was formed by a large landslide, triggered by the 1927 Gulang earthquake (M = 8.0). The lake sediment sequence can be separated into three units based on lithologic, sedimentary, and isotopic characteristics. Starting from the bottom of the sequence, these are: (1) unweathered, coarse, sandy valley-floor deposits or landslide debris that pre-date the lake, (2) landslide-induced, fine-grained soil or reworked landslide debris with a high organic content, and (3) lacustrine sediments with low organic content and laminations. These annual laminations provide a high-resolution record of anthropogenic and environmental changes during the twentieth century, recording enhanced sediment input associated with two phases of construction activities. The high mean sedimentation rates of up to 4.8 mm year(-1) underscore the potential for reconstructing such distinct sediment pulses in remote, forested, and seemingly undisturbed mountain catchments.
The present study proposes a General Probabilistic Framework (GPF) for uncertainty and global sensitivity analysis of deterministic models in which, in addition to scalar inputs, non-scalar and correlated inputs can be considered as well. The analysis is conducted with the variance-based approach of Sobol/Saltelli where first and total sensitivity indices are estimated. The results of the framework can be used in a loop for model improvement, parameter estimation or model simplification. The framework is applied to SWAP, a 113 hydrological model for the transport of water, solutes and heat in unsaturated and saturated soils. The sources of uncertainty are grouped in five main classes: model structure (soil discretization), input (weather data), time-varying (crop) parameters, scalar parameters (soil properties) and observations (measured soil moisture). For each source of uncertainty, different realizations are created based on direct monitoring activities. Uncertainty of evapotranspiration, soil moisture in the root zone and bottom fluxes below the root zone are considered in the analysis. The results show that the sources of uncertainty are different for each output considered and it is necessary to consider multiple output variables for a proper assessment of the model. Improvements on the performance of the model can be achieved reducing the uncertainty in the observations, in the soil parameters and in the weather data. Overall, the study shows the capability of the GPF to quantify the relative contribution of the different sources of uncertainty and to identify the priorities required to improve the performance of the model. The proposed framework can be extended to a wide variety of modelling applications, also when direct measurements of model output are not available.
Text displayed in a video is an essential part for the high-level semantic information of the video content. Therefore, video text can be used as a valuable source for automated video indexing in digital video libraries. In this paper, we propose a workflow for video text detection and recognition. In the text detection stage, we have developed a fast localization-verification scheme, in which an edge-based multi-scale text detector first identifies potential text candidates with high recall rate. Then, detected candidate text lines are refined by using an image entropy-based filter. Finally, Stroke Width Transform (SWT)- and Support Vector Machine (SVM)-based verification procedures are applied to eliminate the false alarms. For text recognition, we have developed a novel skeleton-based binarization method in order to separate text from complex backgrounds to make it processible for standard OCR (Optical Character Recognition) software. Operability and accuracy of proposed text detection and binarization methods have been evaluated by using publicly available test data sets.
Meyners, Christian ; Wawrzinek, Robert ; Kraemer, Andreas ; Hinz, Steffen ; Wessig, Pablo ; Meyer-Almes, Franz-Josef
High-throughput assays for drug screening applications have to fulfill particular specifications. Besides the capability to identify even compounds with low potency, one of the major issues is to minimize the number of false-positive hits in a screening campaign in order to reduce the logistic effort for the subsequent cherry picking and confirmation procedure. In this respect, fluorescence lifetime (FLT) appears as an ideal readout parameter that is supposed to be robust against autofluorescent and light-absorbing compounds, the most common source of systematic false positives. The extraordinary fluorescence features of the recently discovered [1,3]dioxolo[4,5-f][1,3]benzodioxole dyes were exploited to develop an FLT-based binding assay with exceptionally robust readout. The assay setup was comprehensively validated and shown to comply not only with all requirements for a powerful high-throughput screening assay but also to be suitable to determine accurate binding constants for inhibitors against enzymes of the histone deacetylase family. Using the described binding assay, the first inhibitors against three members of this enzyme family from Pseudomonas aeruginosa were identified. The compounds were characterized in terms of potency and selectivity profile. The novel ligand probe should also be applicable to other homologues of the histone deacetylase family that are inhibited by N-hydroxy-N'-phenyloctandiamide.
Brothers, Soren M. ; Koehler, J. ; Attermeyer, Katrin ; Grossart, Hans-Peter ; Mehner, T. ; Meyer, N. ; Scharnweber, Inga Kristin ; Hilt, Sabine
This study examines a natural, rapid, fivefold increase in dissolved organic carbon (DOC) concentrations in a temperate shallow lake, describing the processes by which increased DOC resulted in anoxic conditions and altered existing carbon cycling pathways. High precipitation for two consecutive years led to rising water levels and the flooding of adjacent degraded peatlands. Leaching from the flooded soils provided an initial increase in DOC concentrations (from a 2010 mean of 12 +/- 1 mg L-1 to a maximum concentration of 53 mg L-1 by June 2012). Increasing water levels, DOC, and phytoplankton concentrations reduced light reaching the sediment surface, eliminating most benthic primary production and promoting anoxia in the hypolimnion. From January to June 2012 there was a sudden increase in total phosphorus (from 57 mg L-1 to 216 mg L-1), DOC (from 24.6 mg L-1 to 53 mg L-1), and iron (from 0.12 mg L-1 to 1.07 mg L-1) concentrations, without any further large fluxes in water levels. We suggest that anoxic conditions at the sediment surface and flooded soils produced a dramatic release of these chemicals that exacerbated brownification and eutrophication, creating anoxic conditions that persisted roughly 6 months below a water depth of 1 m and extended periodically to the water surface. This brownification-anoxia feedback loop resulted in a near-complete loss of macroinvertebrate and fish populations, and increased surface carbon dioxide (CO2) emissions by an order of magnitude relative to previous years.
Indonesien zählt zu den weltweit führenden Ländern bei der Nutzung von geothermischer Energie. Die geothermischen Energiequellen sind im Wesentlichen an den aktiven Vulkanismus gebunden, der durch die Prozesse an der indonesischen Subduktionszone verursacht wird. Darüber hinaus sind geotektonische Strukturen wie beispielsweise die Sumatra-Störung als verstärkende Faktoren für das geothermische Potenzial von Bedeutung. Bei der geophysikalischen Erkundung der indonesischen Geothermie-Ressourcen konzentrierte man sich bisher vor allem auf die Magnetotellurik. Passive Seismologie wurde dahingegen ausschließlich für die Überwachung von im Betrieb befindlichen Geothermie-Anlagen verwendet. Jüngste Untersuchungungen z.B. in Island und in den USA haben jedoch gezeigt, dass seismologische Verfahren bereits in der Erkundungsphase wichtige Informationen zu den physikalischen Eigenschaften, zum Spannungsfeld und zu möglichen Fluid- und Wärmetransportwegen liefern können. In der vorgelegten Doktorarbeit werden verschiedene moderne Methoden der passiven Seismologie verwendet, um beispielhaft ein neues, von der indonesischen Regierung für zukünftige geothermische Energiegewinnung ausgewiesenes Gebiet im nördlichen Teil Sumatras (Indonesien) zu erkunden. Die konkreten Ziele der Untersuchungen umfassten (1) die Ableitung von 3D Strukturmodellen der P- und S-Wellen Geschwindigkeiten (Parameter Vp und Vs), (2) die Bestimmung der Absorptionseigenschaften (Parameter Qp), und (3) die Kartierung und Charakterisierung von Störungssystemen auf der Grundlage der Seismizitätsverteilung und der Herdflächenlösungen. Für diese Zwecke habe ich zusammen mit Kollegen ein seismologisches Netzwerk in Tarutung (Sumatra) aufgebaut und über einen Zeitraum von 10 Monaten (Mai 2011 – Februar 2012) betrieben. Insgesamt wurden hierbei 42 Stationen (jeweils ausgestattet mit EDL-Datenlogger, 3-Komponenten, 1 Hz Seismometer) über eine Fläche von etwa 35 x 35 km verteilt. Mit dem Netzwerk wurden im gesamten Zeitraum 2568 lokale Erdbeben registriert. Die integrierte Betrachtung der Ergebnisse aus den verschiedenen Teilstudien (Tomographie, Erdbebenverteilung) erlaubt neue Einblicke in die generelle geologische Stukturierung sowie eine Eingrenzung von Bereichen mit einem erhöhten geothermischen Potenzial. Das tomographische Vp-Modell ermöglicht eine Bestimmung der Geometrie von Sedimentbecken entlang der Sumatra-Störung. Für die Geothermie besonders interessant ist der Bereich nordwestlich des Tarutung-Beckens. Die dort abgebildeten Anomalien (erhöhtes Vp/Vs, geringes Qp) habe ich als mögliche Aufstiegswege von warmen Fluiden interpretiert. Die scheinbar asymetrische Verteilung der Anomalien wird hierbei im Zusammenhang mit der Seismizitätsverteilung, der Geometrie der Beben-Bruchflächen, sowie struktur-geologischen Modellvorstellungen diskutiert. Damit werden wesentliche Informationen für die Planung einer zukünftigen geothermischen Anlage bereitgestellt.
A very sensitive X-ray investigation of the giant HII region N11 in the Large Megallanic Cloud was performed using the Chandra X-ray Observatory. The 300 ks observation reveals X-ray sources with luminosities down to 10(32) erg s(-1), increasing the number of known point sources in the field by more than a factor of five. Among these detections are 13 massive stars (3 compact groups of massive stars, 9 O stars, and one early B star) with log(L-X/L-BOL) similar to -6.5 to -7, which may suggest that they are highly magnetic or colliding-wind systems. On the other hand, the stacked signal for regions corresponding to undetected O stars yields log(L-X/L-BOL) similar to -7.3, i.e., an emission level comparable to similar Galactic stars despite the lower metallicity. Other point sources coincide with 11 foreground stars, 6 late-B/A stars in N11, and many background objects. This observation also uncovers the extent and detailed spatial properties of the soft, diffuse emission regions, but the presence of some hotter plasma in their spectra suggests contamination by the unresolved stellar population.
We consider an extension of the Standard Model within the framework of Noncommutative Geometry. The model is based on an older model [C. A. Stephan, Phys. Rev. D 79, 065013 (2009)] which extends the Standard Model by new fermions, a new U(1)-gauge group and, crucially, a new scalar field which couples to the Higgs field. This new scalar field allows to lower the mass of the Higgs mass from similar to 170 GeV, as predicted by the Spectral Action for the Standard Model, to a value of 120-130 GeV. The shortcoming of the previous model lay in its inability to meet all the constraints on the gauge couplings implied by the Spectral Action. These shortcomings are cured in the present model which also features a "dark sector" containing fermions and scalar particles.
This study compares the duration and first two formants (F1 and F2) of 11 nominal monophthongs and five nominal diphthongs in Standard Southern British English (SSBE) and a Northern English dialect. F1 and F2 trajectories were fitted with parametric curves using the discrete cosine transform (DCT) and the zeroth DCT coefficient represented formant trajectory means and the first DCT coefficient represented the magnitude and direction of formant trajectory change to characterize vowel inherent spectral change (VISC). Cross-dialectal comparisons involving these measures revealed significant differences for the phonologically back monophthongs /D, , , u:/ and also /3z:/ and the diphthongs /eI, e, aI, I/. Most cross-dialectal differences are in zeroth DCT coefficients, suggesting formant trajectory means tend to characterize such differences, while first DCT coefficient differences were more numerous for diphthongs. With respect to VISC, the most striking differences are that /u:/is considerably more diphthongized in the Northern dialect and that the F2 trajectory of /e/proceeds in opposite directions in the two dialects. Cross-dialectal differences were found to be largely unaffected by the consonantal context in which the vowels were produced. The implications of the results are discussed in relation to VISC, consonantal context effects and speech perception. (c) 2014 Acoustical Society of America.
Time-delayed collection field (TDCF) and bias-amplified charge extraction (BACE) are applied to as-prepared and annealed poly(3-hexylthiophene):[6,6]-phenyl C-71 butyric acid methyl ester (P3HT:PCBM) blends coated from chloroform. Despite large differences in fill factor, short-circuit current, and power conversion efficiency, both blends exhibit a negligible dependence of photogeneration on the electric field and strictly bimolecular recombination (BMR) with a weak dependence of the BMR coefficient on charge density. Drift-diffusion simulations are performed using the measured coefficients and mobilities, taking into account bimolecular recombination and the possible effects of surface recombination. The excellent agreement between the simulation and the experimental data for an intensity range covering two orders of magnitude indicates that a field-independent generation rate and a density-independent recombination coefficient describe the current-voltage characteristics of the annealed P3HT: PCBM devices, while the performance of the as-prepared blend is shown to be limited by space charge effects due to a low hole mobility. Finally, even though the bimolecular recombination coefficient is small, surface recombination is found to be a negligible loss mechanism in these solar cells.
Zor, K. ; Heiskanen, A. ; Caviglia, Claudia ; Vergani, M. ; Landini, E. ; Shah, F. ; Carminati, Marco ; Martinez-Serrano, A. ; Ramos Moreno, T. ; Kokaia, M. ; Benayahu, Dafna ; Keresztes, Zs. ; Papkovsky, D. ; Wollenberger, Ursula ; Svendsen, W. E. ; Dimaki, M. ; Ferrari, G. ; Raiteri, R. ; Sampietro, M. ; Dufva, M. ; Emneus, Jenny
Downscaling of microfluidic cell culture and detection devices for electrochemical monitoring has mostly focused on miniaturization of the microfluidic chips which are often designed for specific applications and therefore lack functional flexibility. We present a compact microfluidic cell culture and electrochemical analysis platform with in-built fluid handling and detection, enabling complete cell based assays comprising on-line electrode cleaning, sterilization, surface functionalization, cell seeding, cultivation and electrochemical real-time monitoring of cellular dynamics. To demonstrate the versatility and multifunctionality of the platform, we explored amperometric monitoring of intracellular redox activity in yeast (Saccharomyces cerevisiae) and detection of exocytotically released dopamine from rat pheochromocytoma cells (PC12). Electrochemical impedance spectroscopy was used in both applications for monitoring cell sedimentation and adhesion as well as proliferation in the case of PC12 cells. The influence of flow rate on the signal amplitude in the detection of redox metabolism as well as the effect of mechanical stimulation on dopamine release were demonstrated using the programmable fluid handling capability. The here presented platform is aimed at applications utilizing cell based assays, ranging from e.g. monitoring of drug effects in pharmacological studies, characterization of neural stem cell differentiation, and screening of genetically modified microorganisms to environmental monitoring.
Zór, K. ; Heiskanen, A. ; Caviglia, Claudia ; Vergani, M. ; Landini, E. ; Shah, F. ; Carminati, Marco ; Martínez-Serrano, A. ; Ramos Moreno, T. ; Kokaia, M. ; Benayahu, Dafna ; Keresztes, Zs. ; Papkovsky, D. ; Wollenberger, Ursula ; Svendsen, W. E. ; Dimaki, M. ; Ferrari, G. ; Raiteri, R. ; Sampietro, M. ; Dufva, M. ; Emnéus, J.
Downscaling of microfluidic cell culture and detection devices for electrochemical monitoring has mostly focused on miniaturization of the microfluidic chips which are often designed for specific applications and therefore lack functional flexibility. We present a compact microfluidic cell culture and electrochemical analysis platform with in-built fluid handling and detection, enabling complete cell based assays comprising on-line electrode cleaning, sterilization, surface functionalization, cell seeding, cultivation and electrochemical real-time monitoring of cellular dynamics. To demonstrate the versatility and multifunctionality of the platform, we explored amperometric monitoring of intracellular redox activity in yeast (Saccharomyces cerevisiae) and detection of exocytotically released dopamine from rat pheochromocytoma cells (PC12). Electrochemical impedance spectroscopy was used in both applications for monitoring cell sedimentation and adhesion as well as proliferation in the case of PC12 cells. The influence of flow rate on the signal amplitude in the detection of redox metabolism as well as the effect of mechanical stimulation on dopamine release were demonstrated using the programmable fluid handling capability. The here presented platform is aimed at applications utilizing cell based assays, ranging from e.g. monitoring of drug effects in pharmacological studies, characterization of neural stem cell differentiation, and screening of genetically modified microorganisms to environmental monitoring.
Stoof-Leichsenring, Kathleen Rosemarie ; Bernhardt, Nadine ; Pestryakova, Luidmila Agafyevna ; Epp, Laura Saskia ; Herzschuh, Ulrike ; Tiedemann, Ralph
Diatom diversity in lakes of northwest Yakutia (Siberia) was investigated by microscopic and genetic analysis of surface and cored lake sediments, to evaluate the use of sedimentary DNA for paleolimnological diatom studies and to identify obscure genetic diversity that cannot be detected by microscopic methods. Two short (76 and 73 bp) and one longer (577 bp) fragments of the ribulose 1,5-bisphosphate carboxylase/oxygenase (rbcL) gene, encoding the large subunit of the rbcL, were used as genetic markers. Diverse morphological assemblages of diatoms, dominated by small benthic fragilarioid taxa, were retrieved from the sediments of each lake. These minute fragilarioid taxa were examined by scanning electron microscopy, revealing diverse morphotypes in Staurosira and Staurosirella from the different lakes. Genetic analyses indicated a dominance of haplotypes that were assigned to fragilarioid taxa and less genetic diversity in other diatom taxa. The long rbcL_577 amplicon identified considerable diversification among haplotypes clustering within the Staurosira/Staurosirella genera, revealing 19 different haplotypes whose spatial distribution appears to be primarily related to the latitude of the lakes, which corresponds to a vegetation and climate gradient. Our rbcL markers are valuable tools for tracking differences between diatom lineages that are not visible in their morphologies. These markers revealed putatively high genetic diversity within the Staurosira/Staurosirella species complex, at a finer scale than is possible to resolve by microscopic determination. The rbcL markers may provide additional reliable information on the diversity of barely distinguishable minute benthic fragilarioids. Environmental sequencing may thus allow the tracking of spatial and temporal diversification in Siberian lakes, especially in the context of diatom responses to recent environmental changes, which remains a matter of controversy.
2013 jährte sich das Inkrafttreten der Europäischen Menschenrechtskonvention zum 60. Mal. Seit ihrem Bestehen hat die Konvention insbesondere durch den auf ihrer Grundlage gegründeten Gerichtshof den Schutz der Menschenrechte in Europa wesentlich gestärkt. Mit ihren mittlerweile 47 Vertragsparteien ist sie zu einem gesamteuropäischen Grundrechtsschutzsystem geworden, dessen Akzeptanz sich nicht zuletzt an den in den vergangenen Jahren rasant gestiegenen Fallzahlen zeigt. Dennoch steht die EMRK auch in der Zukunft vor besonderen Herausforderungen. Dieser Band stellt den Versuch einer Bilanz der vergangenen 60 Jahre dar und enthält die Beiträge der Vortragenden des Workshops „60 Jahre Europäische Menschenrechtskonvention – die Konvention als ‚living instrument‘“, der anlässlich des Jubiläums durch das MenschenRechtsZentrum der Universität Potsdam veranstaltet wurde. Schwerpunktmäßig beschäftigen sich die Beiträge mit der Rechtsfortbildung durch den EGMR, insbesondere mittels einer dynamischen Auslegung der Konvention, der konstitutionellen Dimension der EMRK, der Durchsetzung seiner Urteile sowie dem Reformbedarf aufgrund gestiegener Arbeitsbelastung.
Muiva-Mutisya, Lois ; Macharia, Bernard ; Heydenreich, Matthias ; Koch, Andreas ; Akala, Hoseah M. ; Derese, Solomon ; Omosa, Leonidah K. ; Yusuf, Amir O. ; Kamau, Edwin ; Yenesew, Abiy
The CH2Cl2/MeOH (1: 1) extract of the roots of Tephrosia villosa showed good antiplasmodial activity against the chloroquine-sensitive (D6) and chloroquine-resistant (W2) strains of Plasmodium falciparum with IC50 values of 3.1 +/- 0.4 and 1.3 +/- 0.3 mu g/mL, respectively. Chromatographic separation of the extract yielded a new rotenoid, 6 alpha-hydroxy-alpha-toxicarol, along with five known rotenoids, (rotenone, deguelin, sumatrol, 12 alpha-hydroxy-alpha-toxicarol and villosinol). Similar treatment of the extract of the stem of Tephrosia purpurea (IC50 = 4.1 +/- 0.4 and 1.9 +/- 0.2 mu g/mL against D6 and W2 strains of P. falciparum, respectively) yielded a new flavone having a unique substituent at C-7/C-8 [trivial name (+)-tephrodin], along with the known flavonoids tachrosin, obovatin methyl ether and derrone. The relative configuration and the most stable conformation in (+)-tephrodin was determined by NMR and theoretical energy calculations. The rotenoids and flavones tested showed good to moderate antiplasmodial activities (IC50 = 9 +/- 23 mu M). Whereas the cytotoxicity of rotenoids is known, the flavones (+)-tephrodin and tachrosin did not show significant cytotoxicity (IC50 > 100 mu M;) against mammalian African monkey kidney (vero) and human larynx carcinoma (HEp2) cell lines. (C) 2014 Phytochemical Society of Europe. Published by Elsevier B.V. All rights reserved.
Derese, Solomon ; Barasa, Leonard ; Akala, Hoseah M. ; Yusuf, Amir O. ; Kamau, Edwin ; Heydenreich, Matthias ; Yenesew, Abiy
The CH2Cl2/MeOH (1: 1) extract of the stem bark of Millettia oblata ssp. teitensis showed antiplasmodial activity (IC50 = 10-12 mu g/mL) against the chloroquine-sensitive (D6) and chloroquine-resistant (W2) strains of Plasmodium falciparum. Chromatographic separation of the extract led to the isolation of a new isoflavone, 4'-prenyloxyderrone (1), together with known isoflavones (8-O-methylretusin, durmillone, maximaisoflavone B, maximaisoflavone H and maximaisoflavone J), a rotenoid (tephrosin) and a triterpene (lupeol). Similar investigation of Millettia leucantha resulted in the identification of the isoflavones afrormosin and wistin, and the flavone chrysin. The identification of these compounds was based on their spectroscopic data. Five of the isoflavones isolated from these plants as well as 11 previously reported compounds from Millettia dura were tested and showed good to moderate antiplasmodial activities (IC50 = 13-53 mu M), with the new compound, 4'-prenyloxyderrone, being the most active (IC50 = 13-15 mu M).
Sarauli, David ; Peters, Kristina ; Xu, Chenggang ; Schulz, Burkhard ; Fattakhova-Rohlfing, Dina ; Lisdat, Fred
We report on the fabrication of a complex electrode architecture for efficient direct bioelectrocatalysis. In the developed procedure, the redox enzyme pyrroloquinoline quinone-dependent glucose dehydrogenase entrapped in a sulfonated polyaniline [poly(2-methoxyaniline-5-sulfonic acid)-co-aniline] was immobilized on macroporous indium tin oxide (macroITO) electrodes. The use of the 3D-conducting scaffold with a large surface area in combination with the conductive polymer enables immobilization of large amounts of enzyme and its efficient communication with the electrode, leading to enhanced direct bioelectrocatalysis. In the presence of glucose, the fabricated bioelectrodes show an exceptionally high direct bioelectrocatalytical response without any additional mediator. The catalytic current is increased more than 200-fold compared to planar ITO electrodes. Together with a high long-term stability (the current response is maintained for >90% of the initial value even after 2 weeks of storage), the transparent 3D macroITO structure with a conductive polymer represents a valuable basis for the construction of highly efficient bioelectronic units, which are useful as indicators for processes liberating glucose and allowing optical and electrochemical transduction.
Atilaw, Yoseph ; Heydenreich, Matthias ; Ndakala, Albert ; Akala, Hoseah M. ; Kamau, Edwin ; Yenesew, Abiy
The stem bark extract of Schizozygia coffaeoides (Apocynaceae) showed moderate antiplasmodial activity (IC50 = 8-12 mu g/mL) against the chloroquine-sensitive (D6) and chloroquine-resistant (W2) strains of Plasmodium falciparum. Chromatographic separation of the extract led to the isolation of a new schizozygane indoline alkaloid, named 3-oxo-14 alpha, 15 alpha-epoxyschizozygine. In addition, two dimeric anthraquinones, cassiamin A and cassiamin B, were identified for the first time in the family Apocynaceae. The structures of the isolated compounds were deduced on the basis of spectroscopic evidence. The schizozygane indole alkaloids showed good to moderate antiplasmodial activities (IC50 = 13-52 mu m). (C) 2014 Phytochemical Society of Europe. Published by Elsevier B.V. All rights reserved.
In the context of examining the potential usage of safe and sustainable geothermal energy in the Alberta Basin, whether in deep sediments or crystalline rock, the understanding of the in situ stress state is crucial. It is a key challenge to estimate the 3-D stress state at an arbitrarily chosen point in the crust, based on sparsely distributed in situ stress data.
To address this challenge, we present a large-scale 3-D geomechanical-numerical model (700 km x 1200 km x 80 km) from a large portion of the Alberta Basin, to provide a 3-D continuous quantification of the contemporary stress orientations and stress magnitudes. To calibrate the model, we use a large database of in situ stress orientation (321 S-Hmax) as well as stress magnitude data (981 S-V, 1720 S-hmin and 2 (+11) S-Hmax) from the Alberta Basin. To find the best-fit model, we vary the material properties and primarily the displacement boundary conditions of the model. This study focusses in detail on the statistical calibration procedure, because of the large amount of available data, the diversity of data types, and the importance of the order of data tests.
The best-fit model provides the total 3-D stress tensor for nearly the whole Alberta Basin, and allows estimation of stress orientation and stress magnitudes in advance of any well. First-order implications for the well design and configuration of enhanced geothermal systems are revealed. Systematic deviations of the modelled stress from the in situ data are found for stress orientations in the Peace River and the Bow Island Arch as well as for leak-off test magnitudes.
'Mitfühlend sprechen'
(2014)
Im Zentrum dieser interaktional-linguistischen Untersuchung steht die Frage, welchen Beitrag die prosodisch-phonetische Gestaltung einer Äußerung zu ihrer Interpretation als Darstellung von Empathie leistet. Dem liegt eine interaktionale Auffassung von Empathie zu Grunde: Empathie wird nicht als psychoemotionaler Zustand konzeptualisiert, sondern als Darstellung von Verstehen/ Verständnis/ Mitgefühl/ Mitleid in sozialer Interaktion. Gegenstand der Untersuchung ist die interaktive Bearbeitung persönlicher Erlebnisse in deutschen Alltagsgesprächen. Es wird gezeigt, dass – an spezifischen sequentiellen Positionen – Kombinationen folgender prosodisch-phonetischer Ressourcen potenziell relevant sind, um Äußerungen als empathisch, hier i.S.v. 'mitfühlend', interpretierbar zu machen: geringere und/ oder abnehmende Lautstärke/ Diminuendo, tiefes Tonhöhenregister, flach auslaufende Kontur, Behauchung, Knarrstimme, geringe Sprechspannung/ weiche Artikulation, Silbendehnung, Lippenrundung, rhythmische Integration/ Legato-Rhythmus.
"Tolerantes Brandenburg"
(2014)
1. Einleitung
2. Kriminalitätsprävention und Rechtsextremismusprävention
3. Ausgewählte Strukturelemente des Kooperationsverbundes TBB
3.1 Aufgabendefinition zwischen Rechtsextremismusbekämpfung und Demokratieförderung
3.2 Status der landesweiten Zentralstelle
3.3 Ressortübergreifende Aufgaben im Verhältnis zu den Fachressorts
3.4 Vernetzung und Hierarchie
3.5 Verhältnis zur Zivilgesellschaft
3.6 Evaluation
4. Fazit