Refine
Year of publication
- 2018 (32) (remove)
Document Type
- Doctoral Thesis (32) (remove)
Is part of the Bibliography
- yes (32)
Keywords
- Magnetismus (3)
- magnetism (3)
- Bakterien (2)
- Ferroelektrika (2)
- bacteria (2)
- ferroelectrics (2)
- mode stability (2)
- Antarctica (1)
- Antarktis (1)
- Astronomie (1)
Institute
- Institut für Physik und Astronomie (32) (remove)
Eta Carinae
(2018)
The exceptional binary star Eta Carinae has been fascinating scientists and the people in the Southern hemisphere alike for hundreds of years. It survived an enormous outbreak, comparable to a supernova energy-wise, and for a short period became the brightest star of the night sky. From observations from the radio regime to X-rays the system's characteristics and its emission in photon energies up to ~ 50 keV are well studied today. The binary is composed of two massive stars of ~ 30 and ~ 100 solar masses. Either star drives a strong stellar wind that continuously carries away a fraction of its mass. The collision of these winds leads to a shock on each side of the encounter. In the wind-wind-collision region plasma gets heated when it is overrun by the shocks. Part of the emission seen in X-rays can be attributed to this plasma. Above ~ 50 keV the emission is no longer of thermal origin: the required plasma temperature exceeds the available mechanical energy input of the stellar winds. In contrast to its observational history in thermal energies observational evidence of Eta Carinae's non-thermal emission has only recently built up. In high-energy gamma-rays Eta Carinae is the only binary of its kind that has been detected unambiguously. Its energy spectrum reaches up to ~ hundred GeV, a regime where satellite-based gamma-ray experiments run out of statistics. Ground-based gamma-ray experiments have the advantage of large photon collection areas. H.E.S.S. is the only gamma-ray experiment located in the Southern hemisphere and thus able to observe Eta Carinae in this energy range. H.E.S.S. measures gamma-rays via electromagnetic showers of particles that very-high-energy gamma-rays initiate in the atmosphere. The main challenge in observations of Eta Carinae with H.E.S.S. is the UV emission of the Carina nebula that leads to a background that is up to 10 times stronger than usual for H.E.S.S. This thesis presents the first detection of a colliding-wind binary in very-high-energy gamma-rays and documents the studies that led to it. The differential gamma-ray energy spectrum of Eta Carinae is measured up to 700 GeV. A hadronic and leptonic origin of the gamma-ray emission is discussed and based on the comparison of cooling times a hadronic scenario is favoured.
Ferroic materials have attracted a lot of attention over the years due to their wide range of applications in sensors, actuators, and memory devices. Their technological applications originate from their unique properties such as ferroelectricity and piezoelectricity. In order to optimize these materials, it is necessary to understand the coupling between their nanoscale structure and transient response, which are related to the atomic structure of the unit cell.
In this thesis, synchrotron X-ray diffraction is used to investigate the structure of ferroelectric thin film capacitors during application of a periodic electric field. Combining electrical measurements with time-resolved X-ray diffraction on a working device allows for visualization of the interplay between charge flow and structural motion. This constitutes the core of this work. The first part of this thesis discusses the electrical and structural dynamics of a ferroelectric Pt/Pb(Zr0.2,Ti0.8)O3/SrRuO3 heterostructure during charging, discharging, and polarization reversal. After polarization reversal a non-linear piezoelectric response develops on a much longer time scale than the RC time constant of the device. The reversal process is inhomogeneous and induces a transient disordered domain state. The structural dynamics under sub-coercive field conditions show that this disordered domain state can be remanent and can be erased with an appropriate voltage pulse sequence. The frequency-dependent dynamic characterization of a Pb(Zr0.52,Ti0.48)O3 layer, at the morphotropic phase boundary, shows that at high frequency, the limited domain wall velocity causes a phase lag between the applied field and both the structural and electrical responses. An external modification of the RC time constant of the measurement delays the switching current and widens the electromechanical hysteresis loop while achieving a higher compressive piezoelectric strain within the crystal.
In the second part of this thesis, time-resolved reciprocal space maps of multiferroic BiFeO3 thin films were measured to identify the domain structure and investigate the development of an inhomogeneous piezoelectric response during the polarization reversal. The presence of 109° domains is evidenced by the splitting of the Bragg peak.
The last part of this work investigates the effect of an optically excited ultrafast strain or heat pulse propagating through a ferroelectric BaTiO3 layer, where we observed an additional current response due to the laser pulse excitation of the metallic bottom electrode of the heterostructure.
Movement and navigation are essential for many organisms during some parts of their lives. This is also true for bacteria, which can move along surfaces and swim though liquid environments. They are able to sense their environment, and move towards environmental cues in a directed fashion.
These abilities enable microbial lifecyles in biofilms, improved food uptake, host infection, and many more. In this thesis we study aspects of the swimming movement - or motility - of the soil bacterium (P. putida). Like most bacteria, P. putida swims by rotating its helical flagella, but their arrangement differs from the main model organism in bacterial motility research: (E. coli). P. putida is known for its intriguing motility strategy, where fast and slow episodes can occur after each other. Up until now, it was not known how these two speeds can be produced, and what advantages they might confer to this bacterium.
Normally the flagella, the main component of thrust generation in bacteria, are not observable by ordinary light microscopy. In order to elucidate this behavior, we therefore used a fluorescent staining technique on a mutant strain of this species to specifically label the flagella, while leaving the cell body only faintly stained. This allowed us to image the flagella of the swimming bacteria with high spacial and temporal resolution with a customized high speed fluorescence microscopy setup. Our observations show that P. putida can swim in three different modes. First, It can swim with the flagella pushing the cell body, which is the main mode of swimming motility previously known from other bacteria. Second, it can swim with the flagella pulling the cell body, which was thought not to be possible in situations with multiple flagella. Lastly, it can wrap its flagellar bundle around the cell body, which results in a speed wich is slower by a factor of two. In this mode, the flagella are in a different physical conformation with a larger radius so the cell body can fit inside. These three swimming modes explain the previous observation of two speeds, as well as the non strict alternation of the different speeds.
Because most bacterial swimming in nature does not occur in smoothly walled glass enclosures under a microscope, we used an artificial, microfluidic, structured system of obstacles to study the motion of our model organism in a structured environment. Bacteria were observed in microchannels with cylindrical obstacles of different sizes and with different distances with video microscopy and cell tracking. We analyzed turning angles, run times, and run length, which we compared to a minimal model for movement in structured geometries. Our findings show that hydrodynamic interactions with the walls lead to a guiding of the bacteria along obstacles. When comparing the observed behavior with the statics of a particle that is deflected with every obstacle contact, we find that cells run for longer distances than that model.
Navigation in chemical gradients is one of the main applications of motility in bacteria. We studied the swimming response of P. putida cells to chemical stimuli (chemotaxis) of the common food preservative sodium benzoate. Using a microfluidic gradient generation device, we created gradients of varying strength, and observed the motion of cells with a video microscope and subsequent cell tracking. Analysis of different motility parameters like run lengths and times, shows that P. putida employs the classical chemotaxis strategy of E. coli: runs up the gradient are biased to be longer than those down the gradient. Using the two different run speeds we observed due to the different swimming modes, we classify runs into `fast' and `slow' modes with a Gaussian mixture model (GMM). We find no evidence that P. putida's uses its swimming modes to perform chemotaxis.
In most studies of bacterial motility, cell tracking is used to gather trajectories of individual swimming cells. These trajectories then have to be decomposed into run sections and tumble sections. Several algorithms have been developed to this end, but most require manual tuning of a number of parameters, or extensive measurements with chemotaxis mutant strains. Together with our collaborators, we developed a novel motility analysis scheme, based on generalized Kramers-Moyal-coefficients. From the underlying stochastic model, many parameters like run length etc., can be inferred by an optimization procedure without the need for explicit run and tumble classification. The method can, however, be extended to a fully fledged tumble classifier. Using this method, we analyze E. coli chemotaxis measurements in an aspartate analog, and find evidence for a chemotactic bias in the tumble angles.
Shaping via binding
(2018)
Samarium hexaboride
(2018)
Gamma-ray astronomy has proven to provide unique insights into cosmic-ray accelerators in the past few decades. By combining information at the highest photon energies with the entire electromagnetic spectrum in multi-wavelength studies, detailed knowledge of non-thermal particle populations in astronomical objects and systems has been gained: Many individual classes of gamma-ray sources could be identified inside our galaxy and outside of it. Different sources were found to exhibit a wide range of temporal evolution, ranging from seconds to stable behaviours over many years of observations. With the dawn of both neutrino- and gravitational wave astronomy, additional messengers have come into play over the last years. This development presents the advent of multi-messenger astronomy: a novel approach not only to search for sources of cosmic rays, but for astronomy in general.
In this thesis, both traditional multi-wavelength studies and multi-messenger studies will be presented. They were carried out with the H.E.S.S. experiment, an imaging air Cherenkov telescope array located in the Khomas Highland of Namibia. H.E.S.S. has entered its second phase in 2012 with the addition of a large, fifth telescope. While the initial array was limited to the study of gamma-rays with energies above 100 GeV, the new instrument allows to access gamma-rays with energies down to a few tens of GeV. Strengths of the multi-wavelength approach will be demonstrated at the example of the galaxy NGC253, which is undergoing an episode of enhanced star-formation. The gamma-ray emission will be discussed in light of all the information on this system available from radio, infrared and X-rays. These wavelengths reveal detailed information on the population of supernova remnants, which are suspected cosmic-ray accelerators. A broad-band gamma-ray spectrum is derived from H.E.S.S. and Fermi-LAT data. The improved analysis of H.E.S.S. data provides a measurement which is no longer dominated by systematic uncertainties. The long-term behaviour of cosmic rays in the starburst galaxy NGC253 is finally characterised.
In contrast to the long time-scale evolution of a starburst galaxy, multi-messenger studies are especially intriguing when shorter time-scales are being probed. A prime example of a short time-scale transient are Gamma Ray Bursts. The efforts to understand this phenomenon effectively founded the branch of gamma-ray astronomy. The multi-messenger approach allows for the study of illusive phenomena such as Gamma Ray Bursts and other transients using electromagnetic radiation, neutrinos, cosmic rays and gravitational waves contemporaneously. With contemporaneous observations getting more important just recently, the execution of such observation campaigns still presents a big challenge due to the different limitations and strengths of the infrastructures.
An alert system for transient phenomena has been developed over the course of this thesis for H.E.S.S. It aims to address many follow-up challenges in order to maximise the science return of the new large telescope, which is able to repoint much faster than the initial four telescopes. The system allows for fully automated observations based on scientific alerts from any wavelength or messenger and allows H.E.S.S. to participate in multi-messenger campaigns. Utilising this new system, many interesting multi-messenger observation campaigns have been performed. Several highlight observations with H.E.S.S. are analysed, presented and discussed in this work. Among them are observations of Gamma Ray Bursts with low latency and low energy threshold, the follow-up of a neutrino candidate in spatial coincidence with a flaring active galactic nucleus and of the merger of two neutron stars, which was revealed by the coincidence of gravitational waves and a Gamma-Ray Burst.
The interaction between surfaces displaying end-grafted hydrophilic polymer brushes plays important roles in biology and in many wet-technological applications. The outer surfaces of Gram-negative bacteria, for example, are composed of lipopolysaccharide (LPS) molecules exposing oligo- and polysaccharides to the aqueous environment. This unique, structurally complex biological interface is of great scientific interest as it mediates the interaction of bacteria with neighboring bacteria in colonies and biofilms. The interaction between polymer-decorated surfaces is generally coupled to the distance-dependent conformation of the polymer chains. Therefore, structural insight into the interacting surfaces is a prerequisite to understand the interaction characteristics as well as the underlying physical mechanisms. This problem has been addressed by theory, but accurate experimental data on polymer conformations under confinement are rare, because obtaining perturbation-free structural insight into buried soft interfaces is inherently difficult.
In this thesis, lipid membrane surfaces decorated with hydrophilic polymers of technological and biological relevance are investigated under controlled interaction conditions, i.e., at defined surface separations. For this purpose, dedicated sample architectures and experimental tools are developed. Via ellipsometry and neutron reflectometry pressure-distance curves and distance-dependent polymer conformations in terms of brush compression and reciprocative interpenetration are determined. Additional element-specific structural insight into the end-point distribution of interacting brushes is obtained by standing-wave x-ray fluorescence (SWXF).
The methodology is first established for poly[ethylene glycol] (PEG) brushes of defined length and grafting density. For this system, neutron reflectometry revealed pronounced brush interpenetration, which is not captured in common brush theories and therefore motivates rigorous simulation-based treatments. In the second step the same approach is applied to realistic mimics of the outer surfaces of Gram-negative bacteria: monolayers of wild type LPSs extracted from E. Coli O55:B5 displaying strain-specific O-side chains. The neutron reflectometry experiments yield unprecedented structural insight into bacterial interactions, which are of great relevance for the properties of biofilms.
In this dissertation the lattice and the magnetic recovery dynamics of the two heavy rare-earth metals Dy and Gd after femtosecond photoexcitation are described. For the investigations, thin films of Dy and Gd were measured at low temperatures in the antiferromagnetic phase of Dy and close to room temperature in the ferromagnetic phase of Gd. Two different optical pump-x-ray probe techniques were employed: Ultrafast x-ray diffraction with hard x-rays (UXRD) yields the structural response of heavy rare-earth metals and resonant soft (elastic) x-ray diffraction (RSXD), which allows measuring directly changes in the helical antiferromagnetic order of Dy. The combination of both techniques enables to study the complex interaction between the magnetic and the phononic subsystems.
Microswimmers, i.e. swimmers of micron size experiencing low Reynolds numbers, have received a great deal of attention in the last years, since many applications are envisioned in medicine and bioremediation. A promising field is the one of magnetic swimmers, since magnetism is biocom-patible and could be used to direct or actuate the swimmers. This thesis studies two examples of magnetic microswimmers from a physics point of view.
The first system to be studied are magnetic cells, which can be magnetic biohybrids (a swimming cell coupled with a magnetic synthetic component) or magnetotactic bacteria (naturally occurring bacteria that produce an intracellular chain of magnetic crystals). A magnetic cell can passively interact with external magnetic fields, which can be used for direction. The aim of the thesis is to understand how magnetic cells couple this magnetic interaction to their swimming strategies, mainly how they combine it with chemotaxis (the ability to sense external gradient of chemical species and to bias their walk on these gradients). In particular, one open question addresses the advantage given by these magnetic interactions for the magnetotactic bacteria in a natural environment, such as porous sediments. In the thesis, a modified Active Brownian Particle model is used to perform simulations and to reproduce experimental data for different systems such as bacteria swimming in the bulk, in a capillary or in confined geometries. I will show that magnetic fields speed up chemotaxis under special conditions, depending on parameters such as their swimming strategy (run-and-tumble or run-and-reverse), aerotactic strategy (axial or polar), and magnetic fields (intensities and orientations), but it can also hinder bacterial chemotaxis depending on the system.
The second example of magnetic microswimmer are rigid magnetic propellers such as helices or random-shaped propellers. These propellers are actuated and directed by an external rotating magnetic field. One open question is how shape and magnetic properties influence the propeller behavior; the goal of this research field is to design the best propeller for a given situation. The aim of the thesis is to propose a simulation method to reproduce the behavior of experimentally-realized propellers and to determine their magnetic properties. The hydrodynamic simulations are based on the use of the mobility matrix. As main result, I propose a method to match the experimental data, while showing that not only shape but also the magnetic properties influence the propellers swimming characteristics.