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Noise and fluctuations are ubiquitous in living systems. Still, the interaction between complex biochemical regulatory systems and the inherent fluctuations ('noise') is only poorly understood. As a paradigmatic example, we study the implications of noise on a recently proposed model of the eukaryotic cell cycle, representing a complex network of interactions between several genes and proteins. The purpose of this work is twofold: First, we show that the inclusion of noise into the description of the system accounts for several recent experimental findings, as e.g. the existence of quantized cycle times in wee1(-) cdc25Delta double-mutant cells of fission yeast. In the main part, we then focus on more general aspects of the interplay between noise and the dynamics of the system. In particular, we demonstrate that a stochastic description leads to qualitative changes in the dynamics, such as the emergence of noise-induced oscillations. These findings will be discussed in the light of an ongoing debate on models of cell division as limit-cycle oscillators versus checkpoint mechanisms. (C) 2004 Elsevier Ltd. All rights reserved
We study the effects of mutual and external chaotic phase synchronization in ensembles of bursting oscillators. These oscillators (used for modeling neuronal dynamics) are essentially multiple time scale systems. We show that a transition to mutual phase synchronization takes place on the bursting time scale of globally coupled oscillators, while on the spiking time scale, they behave asynchronously. We also demonstrate the effect of the onset of external chaotic phase synchronization of the bursting behavior in the studied ensemble by a periodic driving applied to one arbitrarily taken neuron. We also propose an explanation of the mechanism behind this effect. We infer that the demonstrated phenomenon can be used efficiently for controlling bursting activity in neural ensembles
The photoalignment ability of poly[methyl(phenyl)silylene] (PMPSi) films makes it possible to use them as hole- transporting substrates for the preparation of organic oriented films. A PMPSi layer prepared by spin coating was irradiated, after drying, with linearly polarized UV light. Then, water-soluble hydroxyaluminium phthalocyaninesulfonate [Al(OH)Pc(SO3Na)(1-2)] was deposited by casting. The cell ITO/PMPSi/AI(OH)Pc(SO3Na)(1-2)/Al showed non-linear current- voltage characteristics. For applied voltages higher than 10 V, polarized electroluminescence was observed. Its spectral characteristic consisted of two peaks with maxima at about 320 and 700 nm; their polarized anisotropies R-EL = Phi(parallel to) / Phi(perpendicular to) were ca. 15 and 0.5, respectively
We study the dynamics of Bose-Einstein condensates in time-dependent microtraps for the purpose of understanding the influence of the mean field interaction on the performance of interferometers. We identify conditions where the nonlinearity due to atom interactions increases the sensitivity of interferometers to a phase shift. This feature is connected with the adiabatic generation of a dark soliton. We analyse the robustness of this phenomenon with respect to thermal fluctuations, due to excited near fields in an electromagnetic surface trap
Results of energy-dispersive x-ray reflectivity and grazing incidence diffraction studies of Langmuir-Blodgett films exhibited evolution of conventional three-dimensional melting from continuous melting, characteristic of two- dimensional systems, as a function of deposited monolayers. Continuous expansion followed by a sharp phase transition of the in-plane lattice was observed before the melting point and found to be independent of number of deposited layers. Evolution of conventional melting with an increase in the number of monolayers could be quantified by measuring stiffness against tilting of the vertical stack of molecules, which are kept together by an internal field. The internal field as defined in this model reduces as the in-plane lattice expands and the sample temperature approaches melting point. The sharpness of the melting transition, which has been approximated by a Langevin function, increases with the number of deposited monolayers
We study the inference of long-range correlations by means of Detrended Fluctuation Analysis (DFA) and argue that power-law scaling of the fluctuation function and thus long-memory may not be assumed a priori but have to be established. This requires the investigation of the local slopes. We account for the variability characteristic for stochastic processes by calculating empirical confidence regions. Comparing a long-memory with a short-memory model shows that the inference of long-range correlations from a finite amount of data by means of DFA is not specific. We remark that scaling cannot be concluded from a straight line fit to the fluctuation function in a log-log representation. Furthermore, we show that a local slope larger than alpha=0.5 for large scales does not necessarily imply long memory. We also demonstrate, that it is not valid to conclude from a finite scaling region of the fluctuation function to an equivalent scaling region of the autocoffelation function. Finally, we review DFA results for the Prague temperature data set and show that long-range correlations cannot not be concluded unambiguously
In this paper, we present a detailed evaluation of cross wavelet analysis of bivariate time series. We develop a statistical test for zero wavelet coherency based on Monte Carlo simulations. If at least one of the two processes considered is Gaussian white noise, an approximative formula for the critical value can be utilized. In a second part, typical pitfalls of wavelet cross spectra and wavelet coherency are discussed. The wavelet cross spectrum appears to be not suitable for significance testing the interrelation between two processes. Instead, one should rather apply wavelet coherency. Furthermore we investigate problems due to multiple testing. Based on these results, we show that coherency between ENSO and NAO is an artefact for most of the time from 1900 to 1995. However, during a distinct period from around 1920 to 1940, significant coherency between the two phenomena occurs
We present a comprehensive study of the Magellanic Cloud planetary nebula SMP 61 and of its nucleus, a Wolf- Rayet type star classified [WC 5-6]. The observational material consists of HST STIS spectroscopy and imaging, together with optical and UV spectroscopic data collected from the literature and infrared fluxes measured by IRAS. We have performed a detailed spectral analysis of the central star, using the Potsdam code for expanding atmospheres in non-LTE. For the central star we determine the following parameters: L-star = 10(3.96) L-., R-star = 0.42 R-., T-star = 87.5 kK, (M) over dot = 10(-6.12) M-. yr(-1), v(infinity) = 1400 km s(-1), and a clumping factor of D = 4. The elemental abundances by mass are X-He = 0.45, X-C = 0.52, X-N < 5 x 10(-5), X-O = 0.03, and X-Fe < 1 x 10(-4). The fluxes from the model stellar atmosphere were used to compute photoionization models of the nebula. All the available observations, within their error bars, were used to constrain these models. We find that the ionizing fluxes predicted by the stellar model are consistent with the fluxes needed by the photoionization model to reproduce the nebular emission, within the error margins. However, there are indications that the stellar model overestimates the number and hardness of Lyman continuum photons. The photoionization models imply a clumped density structure of the nebular material. The observed C III] lambda1909/C II lambda4267 line ratio implies the existence of carbon-rich clumps in the nebula. Such clumps are likely produced by stellar wind ejecta, possibly mixed with the nebular material. We discuss our results with regard to the stellar and nebular post-AGB evolution. The observed Fe-deficiency for the central star indicates that the material which is now visible on the stellar surface has been exposed to s-process nucleosynthesis during previous thermal pulses. The absence of nitrogen allows us to set an upper limit to the remaining H-envelope mass after a possible AGB final thermal pulse. Finally, we infer from the total amount of carbon detected in the nebula that the strong [WC] mass- loss may have been active only for a limited period during the post-AGB evolution
The frequency of giant arcs - highly distorted and strongly gravitationally lensed background galaxies - is a powerful test for cosmological models. Previous comparisons of arc statistics for the currently favored concordance cosmological model ( lambda cold dark matter [LCDM]) with observations have shown an apparently large discrepancy in underpredicting cluster arcs. We present new ray-shooting results, based on a high-resolution (1024(3) particles in a 320 h(-1) Mpc box) large-scale structure simulation normalized to the Wilkinson Microwave Anisotropy Probe (WMAP) observations. We follow light rays through a pseudo - three-dimensional matter distribution approximated by up to 38 lens planes and evaluate the occurrence of arcs for various source redshifts. We find that the frequency of strongly lensed background galaxies is a steep function of source redshift: the optical depth for giant arcs increases by a factor of 5 when background sources are moved from redshift z(s) = 1.0 to 1.5. This is a consequence of a small decrease of the critical surface mass density for lensing, combined with the very steep cluster mass function at the high-mass end plus a modest contribution from secondary lens planes. Our results are consistent with those of Bartelmann et al. if we - as they did - restrict all sources to be at z(s) = 1. If we allow sources extending to or beyond z(s) greater than or equal to 1.5, the apparent discrepancy vanishes: the frequency of arcs increases by about a factor of 10 as compared to previous estimates, and results in roughly one arc per 20 deg(2) over the sky, in good agreement with the observed frequency of arcs
Ab initio calculations have been carried out using the FP-APW+lo method in order to understand the atomic origin of the inverse piezoelectric effect in x-quartz. The external electric field was modelled by a saw-like potential V-ext in order to achieve translational symmetry within a supercell (SC) containing 72 atoms. The original trigonal quartz structure was repeated along the [110] direction, which corresponds to the direction of the external field. An electric field with 550 kV/mm was applied and the atomic positions of the SC were relaxed until the forces acting on the atoms vanished. In parts of the SC, V-ext changes almost linearly and thus the relaxed atomic positions can be used to determine the structural response due to the external electric field. The calculations provide the piezoelectric modulus of the correct order of magnitude. In contrast to previous models and in agreement with recent experimental results, the atomic origin of the piezoelectric effect can be described by a rotation of slightly deformed SiO4 tetrahedra against each other. The change of the Si-O bond lengths and the tetrahedral O-Si-O angles is one order of magnitude smaller than that of the Si-O-Si angles between neighbouring tetrahedra. The calculated changes of X-ray structure factors are in agreement with experiment when the theoretical data are extrapolated down to the much smaller field strength that is applied in the experiment (E < 10 kV/mm). (C) 2004 Elsevier Ltd. All rights reserved