TY - JOUR A1 - Hartung, Niklas A1 - Wahl, Martin A1 - Rastogi, Abhishake A1 - Huisinga, Wilhelm T1 - Nonparametric goodness-of-fit testing for parametric covariate models in pharmacometric analyses JF - CPT: pharmacometrics & systems pharmacology N2 - The characterization of covariate effects on model parameters is a crucial step during pharmacokinetic/pharmacodynamic analyses. Although covariate selection criteria have been studied extensively, the choice of the functional relationship between covariates and parameters, however, has received much less attention. Often, a simple particular class of covariate-to-parameter relationships (linear, exponential, etc.) is chosen ad hoc or based on domain knowledge, and a statistical evaluation is limited to the comparison of a small number of such classes. Goodness-of-fit testing against a nonparametric alternative provides a more rigorous approach to covariate model evaluation, but no such test has been proposed so far. In this manuscript, we derive and evaluate nonparametric goodness-of-fit tests for parametric covariate models, the null hypothesis, against a kernelized Tikhonov regularized alternative, transferring concepts from statistical learning to the pharmacological setting. The approach is evaluated in a simulation study on the estimation of the age-dependent maturation effect on the clearance of a monoclonal antibody. Scenarios of varying data sparsity and residual error are considered. The goodness-of-fit test correctly identified misspecified parametric models with high power for relevant scenarios. The case study provides proof-of-concept of the feasibility of the proposed approach, which is envisioned to be beneficial for applications that lack well-founded covariate models. Y1 - 2021 U6 - https://doi.org/10.1002/psp4.12614 SN - 2163-8306 VL - 10 IS - 6 SP - 564 EP - 576 PB - Nature Publ. Group CY - London ER - TY - JOUR A1 - Démaris, Alix A1 - Widigson, Ella S. K. A1 - Ilvemark, Johan F. K. F. A1 - Steenholdt, Casper A1 - Seidelin, Jakob B. A1 - Huisinga, Wilhelm A1 - Michelet, Robin A1 - Aulin, Linda B. S. A1 - Kloft, Charlotte T1 - Ulcerative colitis and acute severe ulcerative colitis patients are overlooked in infliximab population pharmacokinetic models BT - results from a comprehensive review JF - Pharmaceutics / Molecular Diversity Preservation International N2 - Ulcerative colitis (UC) is part of the inflammatory bowels diseases, and moderate to severe UC patients can be treated with anti-tumour necrosis alpha monoclonal antibodies, including infliximab (IFX). Even though treatment of UC patients by IFX has been in place for over a decade, many gaps in modelling of IFX PK in this population remain. This is even more true for acute severe UC (ASUC) patients for which early prediction of IFX pharmacokinetic (PK) could highly improve treatment outcome. Thus, this review aims to compile and analyse published population PK models of IFX in UC and ASUC patients, and to assess the current knowledge on disease activity impact on IFX PK. For this, a semi-systematic literature search was conducted, from which 26 publications including a population PK model analysis of UC patients receiving IFX therapy were selected. Amongst those, only four developed a model specifically for UC patients, and only three populations included severe UC patients. Investigations of disease activity impact on PK were reported in only 4 of the 14 models selected. In addition, the lack of reported model codes and assessment of predictive performance make the use of published models in a clinical setting challenging. Thus, more comprehensive investigation of PK in UC and ASUC is needed as well as more adequate reports on developed models and their evaluation in order to apply them in a clinical setting. KW - infliximab KW - inflammatory bowel disease KW - ulcerative colitis KW - acute severe KW - disease activity KW - pharmacokinetic KW - pharmacometrics Y1 - 2022 U6 - https://doi.org/10.3390/pharmaceutics14102095 SN - 1999-4923 VL - 14 IS - 10 PB - MDPI CY - Basel ER - TY - JOUR A1 - Moldenhawer, Ted A1 - Moreno, Eduardo A1 - Schindler, Daniel A1 - Flemming, Sven A1 - Holschneider, Matthias A1 - Huisinga, Wilhelm A1 - Alonso, Sergio A1 - Beta, Carsten T1 - Spontaneous transitions between amoeboid and keratocyte-like modes of migration JF - Frontiers in Cell and Developmental Biology N2 - The motility of adherent eukaryotic cells is driven by the dynamics of the actin cytoskeleton. Despite the common force-generating actin machinery, different cell types often show diverse modes of locomotion that differ in their shape dynamics, speed, and persistence of motion. Recently, experiments in Dictyostelium discoideum have revealed that different motility modes can be induced in this model organism, depending on genetic modifications, developmental conditions, and synthetic changes of intracellular signaling. Here, we report experimental evidence that in a mutated D. discoideum cell line with increased Ras activity, switches between two distinct migratory modes, the amoeboid and fan-shaped type of locomotion, can even spontaneously occur within the same cell. We observed and characterized repeated and reversible switchings between the two modes of locomotion, suggesting that they are distinct behavioral traits that coexist within the same cell. We adapted an established phenomenological motility model that combines a reaction-diffusion system for the intracellular dynamics with a dynamic phase field to account for our experimental findings. KW - cell migration KW - amoeboid motility KW - keratocytle-like motility KW - modes of KW - migration KW - D. discoideum KW - actin dynamics Y1 - 2022 U6 - https://doi.org/10.3389/fcell.2022.898351 SN - 2296-634X VL - 10 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Hafner, Verena A1 - Hommel, Bernhard A1 - Kayhan, Ezgi A1 - Lee, Dongheui A1 - Paulus, Markus A1 - Verschoor, Stephan T1 - Editorial: The mechanisms underlying the human minimal self JF - Frontiers in psychology KW - agents KW - self KW - minimal self KW - robotics KW - humanoids KW - cognition Y1 - 2022 U6 - https://doi.org/10.3389/fpsyg.2022.961480 SN - 1664-1078 VL - 13 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Havermann, Felix A1 - Ghirardo, Andrea A1 - Schnitzler, Jörg-Peter A1 - Nendel, Claas A1 - Hoffmann, Mathias A1 - Kraus, David A1 - Grote, Rüdiger T1 - Modeling intra- and interannual variability of BVOC emissions from maize, oil-seed rape, and ryegrass JF - Journal of advances in modeling earth systems N2 - Air chemistry is affected by the emission of biogenic volatile organic compounds (BVOCs), which originate from almost all plants in varying qualities and quantities. They also vary widely among different crops, an aspect that has been largely neglected in emission inventories. In particular, bioenergy-related species can emit mixtures of highly reactive compounds that have received little attention so far. For such species, long-term field observations of BVOC exchange from relevant crops covering different phenological phases are scarcely available. Therefore, we measured and modeled the emission of three prominent European bioenergy crops (maize, ryegrass, and oil-seed rape) for full rotations in north-eastern Germany. Using a proton transfer reaction-mass spectrometer combined with automatically moving large canopy chambers, we were able to quantify the characteristic seasonal BVOC flux dynamics of each crop species. The measured BVOC fluxes were used to parameterize and evaluate the BVOC emission module (JJv) of the physiology-oriented LandscapeDNDC model, which was enhanced to cover de novo emissions as well as those from plant storage pools. Parameters are defined for each compound individually. The model is used for simulating total compound-specific reactivity over several years and also to evaluate the importance of these emissions for air chemistry. We can demonstrate substantial differences between the investigated crops with oil-seed rape having 37-fold higher total annual emissions than maize. However, due to a higher chemical reactivity of the emitted blend in maize, potential impacts on atmospheric OH-chemistry are only 6-fold higher. KW - biogenic volatile organic compounds KW - process-based modeling KW - Zea mays KW - Brassica napus KW - Lolium multiflorum KW - plant ontogenetic stage Y1 - 2022 U6 - https://doi.org/10.1029/2021MS002683 SN - 1942-2466 VL - 14 IS - 3 PB - American Geophysical Union CY - Washington ER - TY - JOUR A1 - Wicha, Sebastian G. A1 - Huisinga, Wilhelm A1 - Kloft, Charlotte T1 - Translational pharmacometric evaluation of typical antibiotic broad-spectrum combination therapies against staphylococcus aureus exploiting in vitro information JF - CPT: pharmacometrics & systems pharmacology N2 - Broad-spectrum antibiotic combination therapy is frequently applied due to increasing resistance development of infective pathogens. The objective of the present study was to evaluate two common empiric broad-spectrum combination therapies consisting of either linezolid (LZD) or vancomycin (VAN) combined with meropenem (MER) against Staphylococcus aureus (S. aureus) as the most frequent causative pathogen of severe infections. A semimechanistic pharmacokinetic-pharmacodynamic (PK-PD) model mimicking a simplified bacterial life-cycle of S. aureus was developed upon time-kill curve data to describe the effects of LZD, VAN, and MER alone and in dual combinations. The PK-PD model was successfully (i) evaluated with external data from two clinical S. aureus isolates and further drug combinations and (ii) challenged to predict common clinical PK-PD indices and breakpoints. Finally, clinical trial simulations were performed that revealed that the combination of VAN-MER might be favorable over LZD-MER due to an unfavorable antagonistic interaction between LZD and MER. Y1 - 2017 U6 - https://doi.org/10.1002/psp4.12197 SN - 2163-8306 VL - 6 SP - 512 EP - 522 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Hülscher, Julian A1 - Sobel, Edward A1 - Kallnik, Niklas A1 - Hoffmann, J. Elis A1 - Millar, Ian L. A1 - Hartmann, Kai A1 - Bernhardt, Anne T1 - Apatites record sedimentary provenance change 4-5 myrs before clay in the Oligocene/Miocene Alpine molasse JF - Frontiers in Earth Science N2 - Extracting information about past tectonic or climatic environmental changes from sedimentary records is a key objective of provenance research. Interpreting the imprint of such changes remains challenging as signals might be altered in the sediment-routing system. We investigate the sedimentary provenance of the Oligocene/Miocene Upper Austrian Northern Alpine Foreland Basin and its response to the tectonically driven exhumation of the Tauern Window metamorphic dome (28 +/- 1 Ma) in the Eastern European Alps by using the unprecedented combination of Nd isotopic composition of bulk-rock clay-sized samples and partly previously published multi-proxy (Nd isotopic composition, trace-element geochemistry, U-Pb dating) sand-sized apatite single-grain analysis. The basin offers an excellent opportunity to investigate environmental signal propagation into the sedimentary record because comprehensive stratigraphic and seismic datasets can be combined with present research results. The bulk-rock clay-sized fraction epsilon Nd values of well-cutting samples from one well on the northern basin slope remained stable at similar to-9.7 from 27 to 19 Ma but increased after 19 Ma to similar to-9.1. In contrast, apatite single-grain distributions, which were extracted from 22 drill-core samples, changed significantly around 23.3 Ma from apatites dominantly from low-grade ( The detailed vegetation cover and structure information in the first two datasets are of use for ecological applications, on one hand for summergreen and evergreen needle-leaf forests and also for tundra-taiga ecotones. Datasets 1 and 2 further support the generation and validation of land cover remote-sensing products in radar and optical remote sensing. In addition to providing information on forest structure and vegetation composition of the vegetation plots, the third and fourth datasets are prepared as training and validation data for machine-learning purposes. For example, the synthetic tree-crown dataset is generated from the raw UAV images and optimized to be used in neural networks. Furthermore, the fourth SiDroForest dataset contains S-2 labeled image patches processed to a high standard that provide training data on vegetation class categories for machine-learning classification with JavaScript Object Notation (JSON) labels provided. The SiDroForest data collection adds unique insights into remote hard-to-reach circumboreal forest regions. Y1 - 2022 U6 - https://doi.org/10.5194/essd-14-4967-2022 SN - 1866-3508 SN - 1866-3516 VL - 14 IS - 11 SP - 4967 EP - 4994 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Dietze, Elisabeth A1 - Mangelsdorf, Kai A1 - Andreev, Andrei A1 - Karger, Cornelia A1 - Schreuder, Laura T. A1 - Hopmans, Ellen C. A1 - Rach, Oliver A1 - Sachse, Dirk A1 - Wennrich, Volker A1 - Herzschuh, Ulrike T1 - Relationships between low-temperature fires, climate and vegetation during three late glacials and interglacials of the last 430 kyr in northeastern Siberia reconstructed from monosaccharide anhydrides in Lake El’gygytgyn sediments JF - Climate of the Past N2 - Landscapes in high northern latitudes are assumed to be highly sensitive to future global change, but the rates and long-term trajectories of changes are rather uncertain. In the boreal zone, fires are an important factor in climate-vegetation interactions and biogeochemical cycles. Fire regimes are characterized by small, frequent, low-intensity fires within summergreen boreal forests dominated by larch, whereas evergreen boreal forests dominated by spruce and pine burn large areas less frequently but at higher intensities. Here, we explore the potential of the monosaccharide anhydrides (MA) levoglucosan, mannosan and galactosan to serve as proxies of low-intensity biomass burning in glacial-to-interglacial lake sediments from the high northern latitudes. We use sediments from Lake El'gygytgyn (cores PG 1351 and ICDP 5011-1), located in the far north-east of Russia, and study glacial and interglacial samples of the last 430 kyr (marine isotope stages 5e, 6, 7e, 8, 11c and 12) that had different climate and biome configurations. Combined with pollen and non-pollen palynomorph records from the same samples, we assess how far the modern relationships between fire, climate and vegetation persisted during the past, on orbital to centennial timescales. We find that MAs attached to particulates were well-preserved in up to 430 kyr old sediments with higher influxes from low-intensity biomass burning in interglacials compared to glacials. MA influxes significantly increase when summergreen boreal forest spreads closer to the lake, whereas they decrease when tundra-steppe environments and, especially, Sphagnum peatlands spread. This suggests that low-temperature fires are a typical characteristic of Siberian larch forests also on long timescales. The results also suggest that low-intensity fires would be reduced by vegetation shifts towards very dry environments due to reduced biomass availability, as well as by shifts towards peatlands, which limits fuel dryness. In addition, we observed very low MA ratios, which we interpret as high contributions of galactosan and mannosan from biomass sources other than those currently monitored, such as the moss-lichen mats in the understorey of the summergreen boreal forest. Overall, sedimentary MAs can provide a powerful proxy for fire regime reconstructions and extend our knowledge of long-term natural fire-climate-vegetation feedbacks in the high northern latitudes. KW - molecular tracers KW - organic aerosols KW - emission factors KW - carbonaceous aerosols KW - pollen records KW - core PG1351 KW - biomass KW - holocene KW - levoglucosan KW - charcoal Y1 - 2020 U6 - https://doi.org/10.5194/cp-16-799-2020 SN - 1814-9332 SN - 1814-9324 VL - 16 IS - 2 SP - 788 EP - 818 PB - Copernicus Publications CY - Göttingen ER - TY - JOUR A1 - Miesner, Timon A1 - Herzschuh, Ulrike A1 - Pestryakova, Luidmila Agafyevna A1 - Wieczorek, Mareike A1 - Zakharov, Evgenii S. A1 - Kolmogorov, Alexei I. A1 - Davydova, Paraskovya V. A1 - Kruse, Stefan T1 - Forest structure and individual tree inventories of northeastern Siberia along climatic gradients JF - Earth system science data : ESSD N2 - We compile a data set of forest surveys from expeditions to the northeast of the Russian Federation, in Krasnoyarsk Krai, the Republic of Sakha (Yakutia), and the Chukotka Autonomous Okrug (59-73 degrees N, 97-169 degrees E), performed between the years 2011 and 2021. The region is characterized by permafrost soils and forests dominated by larch (Larix gmelinii Rupr. and Larix cajanderi Mayr). Our data set consists of a plot database describing 226 georeferenced vegetation survey plots and a tree database with information about all the trees on these plots. The tree database, consisting of two tables with the same column names, contains information on the height, species, and vitality of 40 289 trees. A subset of the trees was subject to a more detailed inventory, which recorded the stem diameter at base and at breast height, crown diameter, and height of the beginning of the crown. We recorded heights up to 28.5 m (median 2.5 m) and stand densities up to 120 000 trees per hectare (median 1197 ha(-1)), with both values tending to be higher in the more southerly areas. Observed taxa include Larix Mill., Pinus L., Picea A. Dietr., Abies Mill., Salix L., Betula L., Populus L., Alnus Mill., and Ulmus L. In this study, we present the forest inventory data aggregated per plot. Additionally, we connect the data with different remote sensing data products to find out how accurately forest structure can be predicted from such products. Allometries were calculated to obtain the diameter from height measurements for every species group. For Larix, the most frequent of 10 species groups, allometries depended also on the stand density, as denser stands are characterized by thinner trees, relative to height. The remote sensing products used to compare against the inventory data include climate, forest biomass, canopy height, and forest loss or disturbance. We find that the forest metrics measured in the field can only be reconstructed from the remote sensing data to a limited extent, as they depend on local properties. This illustrates the need for ground inventories like those data we present here. The data can be used for studying the forest structure of northeastern Siberia and for the calibration and validation of remotely sensed data. Y1 - 2022 U6 - https://doi.org/10.5194/essd-14-5695-2022 SN - 1866-3508 SN - 1866-3516 VL - 14 IS - 12 SP - 5695 EP - 5716 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Kruse, Stefan A1 - Stünzi, Simone Maria A1 - Boike, Julia A1 - Langer, Moritz A1 - Gloy, Josias A1 - Herzschuh, Ulrike T1 - Novel coupled permafrost-forest model (LAVESI-CryoGrid v1.0) revealing the interplay between permafrost, vegetation, and climate across eastern Siberia JF - Geoscientific model development : GMD ; an interactive open access journal of the European Geosciences Union N2 - Boreal forests of Siberia play a relevant role in the global carbon cycle. However, global warming threatens the existence of summergreen larch-dominated ecosystems, likely enabling a transition to evergreen tree taxa with deeper active layers. Complex permafrost-vegetation interactions make it uncertain whether these ecosystems could develop into a carbon source rather than continuing atmospheric carbon sequestration under global warming. Consequently, shedding light on the role of current and future active layer dynamics and the feedbacks with the apparent tree species is crucial to predict boreal forest transition dynamics and thus for aboveground forest biomass and carbon stock developments. Hence, we established a coupled model version amalgamating a one-dimensional permafrost multilayer forest land-surface model (CryoGrid) with LAVESI, an individual-based and spatially explicit forest model for larch species (Larix Mill.), extended for this study by including other relevant Siberian forest species and explicit terrain.
Following parameterization, we ran simulations with the coupled version to the near future to 2030 with a mild climate-warming scenario. We focus on three regions covering a gradient of summergreen forests in the east at Spasskaya Pad, mixed summergreen-evergreen forests close to Nyurba, and the warmest area at Lake Khamra in the southeast of Yakutia, Russia. Coupled simulations were run with the newly implemented boreal forest species and compared to runs allowing only one species at a time, as well as to simulations using just LAVESI. Results reveal that the coupled version corrects for overestimation of active layer thickness (ALT) and soil moisture, and large differences in established forests are simulated. We conclude that the coupled version can simulate the complex environment of eastern Siberia by reproducing vegetation patterns, making it an excellent tool to disentangle processes driving boreal forest dynamics. Y1 - 2022 U6 - https://doi.org/10.5194/gmd-15-2395-2022 SN - 1991-959X SN - 1991-9603 VL - 15 IS - 6 SP - 2395 EP - 2422 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Radosavljevic, Boris A1 - Lantuit, Hugues A1 - Knoblauch, Christian A1 - Couture, Nicole A1 - Herzschuh, Ulrike A1 - Fritz, Michael T1 - Arctic nearshore sediment dynamics - an example from Herschel Island - Qikiqtaruk, Canada JF - Journal of marine science and engineering N2 - Increasing arctic coastal erosion rates imply a greater release of sediments and organic matter into the coastal zone. With 213 sediment samples taken around Herschel Island-Qikiqtaruk, Canadian Beaufort Sea, we aimed to gain new insights on sediment dynamics and geochemical properties of a shallow arctic nearshore zone. Spatial characteristics of nearshore sediment texture (moderately to poorly sorted silt) are dictated by hydrodynamic processes, but ice-related processes also play a role. We determined organic matter (OM) distribution and inferred the origin and quality of organic carbon by C/N ratios and stable carbon isotopes delta C-13. The carbon content was higher offshore and in sheltered areas (mean: 1.0 wt.%., S.D.: 0.9) and the C/N ratios also showed a similar spatial pattern (mean: 11.1, S.D.: 3.1), while the delta C-13 (mean: -26.4 parts per thousand VPDB, S.D.: 0.4) distribution was more complex. We compared the geochemical parameters of our study with terrestrial and marine samples from other studies using a bootstrap approach. Sediments of the current study contained 6.5 times and 1.8 times less total organic carbon than undisturbed and disturbed terrestrial sediments, respectively. Therefore, degradation of OM and separation of carbon pools take place on land and continue in the nearshore zone, where OM is leached, mineralized, or transported beyond the study area. KW - permafrost KW - Arctic Ocean KW - stable carbon isotopes KW - nitrogen KW - sediment KW - chemistry KW - sediment dynamics KW - Beaufort Sea KW - grain size Y1 - 2022 U6 - https://doi.org/10.3390/jmse10111589 SN - 2077-1312 VL - 10 IS - 11 PB - MDPI CY - Basel ER - TY - JOUR A1 - Dallmeyer, Anne A1 - Kleinen, Thomas A1 - Claussen, Martin A1 - Weitzel, Nils A1 - Cao, Xianyong A1 - Herzschuh, Ulrike T1 - The deglacial forest conundrum JF - Nature Communications N2 - How fast the Northern Hemisphere (NH) forest biome tracks strongly warming climates is largely unknown. Regional studies reveal lags between decades and millennia. Here we report a conundrum: Deglacial forest expansion in the NH extra-tropics occurs approximately 4000 years earlier in a transient MPI-ESM1.2 simulation than shown by pollen-based biome reconstructions. Shortcomings in the model and the reconstructions could both contribute to this mismatch, leaving the underlying causes unresolved. The simulated vegetation responds within decades to simulated climate changes, which agree with pollen-independent reconstructions. Thus, we can exclude climate biases as main driver for differences. Instead, the mismatch points at a multi-millennial disequilibrium of the NH forest biome to the climate signal. Therefore, the evaluation of time-slice simulations in strongly changing climates with pollen records should be critically reassessed. Our results imply that NH forests may be responding much slower to ongoing climate changes than Earth System Models predict.
Deglacial forest expansion in the Northern Hemisphere poses a conundrum: Model results agree with the climate signal but are several millennia ahead of reconstructed forest dynamics. The underlying causes remain unsolved. Y1 - 2022 U6 - https://doi.org/10.1038/s41467-022-33646-6 SN - 2041-1723 VL - 13 IS - 1 PB - Nature Publishing Group UK CY - [London] ER - TY - JOUR A1 - Li, Chenzhi A1 - Postl, Alexander K. A1 - Böhmer, Thomas A1 - Cao, Xianyong A1 - Dolman, Andrew M. A1 - Herzschuh, Ulrike T1 - Harmonized chronologies of a global late Quaternary pollen dataset (LegacyAge 1.0) JF - Earth system science data : ESSD N2 - We present a chronology framework named LegacyAge 1.0 containing harmonized chronologies for 2831 pollen records (downloaded from the Neotoma Paleoecology Database and the supplementary Asian datasets) together with their age control points and metadata in machine-readable data formats. All chronologies use the Bayesian framework implemented in Bacon version 2.5.3. Optimal parameter settings of priors (accumulation.shape, memory.strength, memory.mean, accumulation.rate, and thickness) were identified based on information in the original publication or iteratively after preliminary model inspection. The most common control points for the chronologies are radiocarbon dates (86.1 %), calibrated by the latest calibration curves (IntCal20 and SHCal20 for the terrestrial radiocarbon dates in the Northern Hemisphere and Southern Hemisphere and Marine20 for marine materials). The original publications were consulted when dealing with outliers and inconsistencies. Several major challenges when setting up the chronologies included the waterline issue (18.8% of records), reservoir effect (4.9 %), and sediment deposition discontinuity (4.4 %). Finally, we numerically compare the LegacyAge 1.0 chronologies to those published in the original publications and show that the reliability of the chronologies of 95.4% of records could be improved according to our assessment. Our chronology framework and revised chronologies provide the opportunity to make use of the ages and age uncertainties in synthesis studies of, for example, pollen-based vegetation and climate change. The LegacyAge 1.0 dataset, including metadata, datings, harmonized chronologies, and R code used, is openaccess and available at PANGAEA (https://doi.org/10.1594/PANGAEA.933132; Li et al., 2021) and Zenodo (https://doi.org/10.5281/zenodo.5815192; Li et al., 2022), respectively. Y1 - 2022 U6 - https://doi.org/10.5194/essd-14-1331-2022 SN - 1866-3508 SN - 1866-3516 VL - 14 IS - 3 SP - 1331 EP - 1343 PB - Copernics Publications CY - Katlenburg-Lindau ER - TY - JOUR A1 - Courtin, Jérémy A1 - Andreev, Andrei A1 - Raschke, Elena A1 - Bala, Sarah A1 - Biskaborn, Boris A1 - Liu, Sisi A1 - Zimmermann, Heike A1 - Diekmann, Bernhard A1 - Stoof-Leichsenring, Kathleen R. A1 - Pestryakova, Luidmila Agafyevna A1 - Herzschuh, Ulrike T1 - Vegetation changes in Southeastern Siberia during the late pleistocene and the holocene JF - Frontiers in Ecology and Evolution N2 - Relationships between climate, species composition, and species richness are of particular importance for understanding how boreal ecosystems will respond to ongoing climate change. This study aims to reconstruct changes in terrestrial vegetation composition and taxa richness during the glacial Late Pleistocene and the interglacial Holocene in the sparsely studied southeastern Yakutia (Siberia) by using pollen and sedimentary ancient DNA (sedaDNA) records. Pollen and sedaDNA metabarcoding data using the trnL g and h markers were obtained from a sediment core from Lake Bolshoe Toko. Both proxies were used to reconstruct the vegetation composition, while metabarcoding data were also used to investigate changes in plant taxa richness. The combination of pollen and sedaDNA approaches allows a robust estimation of regional and local past terrestrial vegetation composition around Bolshoe Toko during the last similar to 35,000 years. Both proxies suggest that during the Late Pleistocene, southeastern Siberia was covered by open steppe-tundra dominated by graminoids and forbs with patches of shrubs, confirming that steppe-tundra extended far south in Siberia. Both proxies show disturbance at the transition between the Late Pleistocene and the Holocene suggesting a period with scarce vegetation, changes in the hydrochemical conditions in the lake, and in sedimentation rates. Both proxies document drastic changes in vegetation composition in the early Holocene with an increased number of trees and shrubs and the appearance of new tree taxa in the lake's vicinity. The sedaDNA method suggests that the Late Pleistocene steppe-tundra vegetation supported a higher number of terrestrial plant taxa than the forested Holocene. This could be explained, for example, by the "keystone herbivore" hypothesis, which suggests that Late Pleistocene megaherbivores were able to maintain a high plant diversity. This is discussed in the light of the data with the broadly accepted species-area hypothesis as steppe-tundra covered such an extensive area during the Late Pleistocene. KW - last glacial KW - Holocene KW - Lake Bolshoe Toko KW - paleoenvironments KW - sedimentary ancient DNA KW - metabarcoding KW - trnL KW - pollen Y1 - 2021 U6 - https://doi.org/10.3389/fevo.2021.625096 SN - 2296-701X VL - 9 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Heim, Birgit A1 - Lisovski, Simeon A1 - Wieczorek, Mareike A1 - Morgenstern, Anne A1 - Juhls, Bennet A1 - Shevtsova, Iuliia A1 - Kruse, Stefan A1 - Boike, Julia A1 - Fedorova, Irina A1 - Herzschuh, Ulrike T1 - Spring snow cover duration and tundra greenness in the Lena Delta, Siberia BT - two decades of MODIS satellite time series (2001-2021) JF - Environmental research letters N2 - The Lena Delta in Siberia is the largest delta in the Arctic and as a snow-dominated ecosystem particularly vulnerable to climate change. Using the two decades of MODerate resolution Imaging Spectroradiometer satellite acquisitions, this study investigates interannual and spatial variability of snow-cover duration and summer vegetation vitality in the Lena Delta. We approximated snow by the application of the normalized difference snow index and vegetation greenness by the normalized difference vegetation index (NDVI). We consolidated the analyses by integrating reanalysis products on air temperature from 2001 to 2021, and air temperature, ground temperature, and the date of snow-melt from time-lapse camera (TLC) observations from the Samoylov observatory located in the central delta. We extracted spring snow-cover duration determined by a latitudinal gradient. The 'regular year' snow-melt is transgressing from mid-May to late May within a time window of 10 days across the delta. We calculated yearly deviations per grid cell for two defined regions, one for the delta, and one focusing on the central delta. We identified an ensemble of early snow-melt years from 2012 to 2014, with snow-melt already starting in early May, and two late snow-melt years in 2004 and 2017, with snow-melt starting in June. In the times of TLC recording, the years of early and late snow-melt were confirmed. In the three summers after early snow-melt, summer vegetation greenness showed neither positive nor negative deviations. Whereas, vegetation greenness was reduced in 2004 after late snow-melt together with the lowest June monthly air temperature of the time series record. Since 2005, vegetation greenness is rising, with maxima in 2018 and 2021. The NDVI rise since 2018 is preceded by up to 4 degrees C warmer than average June air temperature. The ongoing operation of satellite missions allows to monitor a wide range of land surface properties and processes that will provide urgently needed data in times when logistical challenges lead to data gaps in land-based observations in the rapidly changing Arctic. KW - Arctic vegetation KW - tundra KW - snow cover duration KW - NDVI KW - NDSI KW - MODIS KW - Lena Delta Y1 - 2022 U6 - https://doi.org/10.1088/1748-9326/ac8066 SN - 1748-9326 VL - 17 IS - 8 PB - IOP Publ. Ltd. CY - Bristol ER - TY - JOUR A1 - Herzschuh, Ulrike A1 - Li, Chenzhi A1 - Boehmer, Thomas A1 - Postl, Alexander K. A1 - Heim, Birgit A1 - Andreev, Andrei A. A1 - Cao, Xianyong A1 - Wieczorek, Mareike A1 - Ni, Jian T1 - LegacyPollen 1.0 BT - a taxonomically harmonized global late Quaternary pollen dataset of 2831 records with standardized chronologies JF - Earth system science data : ESSD N2 - Here we describe the LegacyPollen 1.0, a dataset of 2831 fossil pollen records with metadata, a harmonized taxonomy, and standardized chronologies. A total of 1032 records originate from North America, 1075 from Europe, 488 from Asia, 150 from Latin America, 54 from Africa, and 32 from the Indo-Pacific. The pollen data cover the late Quaternary (mostly the Holocene). The original 10 110 pollen taxa names (including variations in the notations) were harmonized to 1002 terrestrial taxa (including Cyperaceae), with woody taxa and major herbaceous taxa harmonized to genus level and other herbaceous taxa to family level. The dataset is valuable for synthesis studies of, for example, taxa areal changes, vegetation dynamics, human impacts (e.g., deforestation), and climate change at global or continental scales. The harmonized pollen and metadata as well as the harmonization table are available from PANGAEA (https://doi.org/10.1594/PANGAEA.929773; Herzschuh et al., 2021). R code for the harmonization is provided at Zenodo (https://doi.org/10.5281/zenodo.5910972; Herzschuh et al., 2022) so that datasets at a customized harmonization level can be easily established. Y1 - 2022 U6 - https://doi.org/10.5194/essd-14-3213-2022 SN - 1866-3508 SN - 1866-3516 VL - 14 IS - 7 SP - 3213 EP - 3227 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Weinelt, Ferdinand Anton A1 - Stegemann, Miriam Songa A1 - Theloe, Anja A1 - Pfäfflin, Frieder A1 - Achterberg, Stephan A1 - Weber, Franz A1 - Dübel, Lucas A1 - Mikolajewska, Agata A1 - Uhrig, Alexander A1 - Kiessling, Peggy A1 - Huisinga, Wilhelm A1 - Michelet, Robin A1 - Hennig, Stefanie A1 - Kloft, Charlotte T1 - Evaluation of a meropenem and piperacillin monitoring program in intensive care unit patients calls for the regular assessment of empirical targets and easy-to-use dosing decision tools JF - Antibiotics : open access journal N2 - The drug concentrations targeted in meropenem and piperacillin/tazobactam therapy also depend on the susceptibility of the pathogen. Yet, the pathogen is often unknown, and antibiotic therapy is guided by empirical targets. To reliably achieve the targeted concentrations, dosing needs to be adjusted for renal function. We aimed to evaluate a meropenem and piperacillin/tazobactam monitoring program in intensive care unit (ICU) patients by assessing (i) the adequacy of locally selected empirical targets, (ii) if dosing is adequately adjusted for renal function and individual target, and (iii) if dosing is adjusted in target attainment (TA) failure. In a prospective, observational clinical trial of drug concentrations, relevant patient characteristics and microbiological data (pathogen, minimum inhibitory concentration (MIC)) for patients receiving meropenem or piperacillin/tazobactam treatment were collected. If the MIC value was available, a target range of 1-5 x MIC was selected for minimum drug concentrations of both drugs. If the MIC value was not available, 8-40 mg/L and 16-80 mg/L were selected as empirical target ranges for meropenem and piperacillin, respectively. A total of 356 meropenem and 216 piperacillin samples were collected from 108 and 96 ICU patients, respectively. The vast majority of observed MIC values was lower than the empirical target (meropenem: 90.0%, piperacillin: 93.9%), suggesting empirical target value reductions. TA was found to be low (meropenem: 35.7%, piperacillin 50.5%) with the lowest TA for severely impaired renal function (meropenem: 13.9%, piperacillin: 29.2%), and observed drug concentrations did not significantly differ between patients with different targets, indicating dosing was not adequately adjusted for renal function or target. Dosing adjustments were rare for both drugs (meropenem: 6.13%, piperacillin: 4.78%) and for meropenem irrespective of TA, revealing that concentration monitoring alone was insufficient to guide dosing adjustment. Empirical targets should regularly be assessed and adjusted based on local susceptibility data. To improve TA, scientific knowledge should be translated into easy-to-use dosing strategies guiding antibiotic dosing. KW - meropenem KW - piperacillin/tazobactam KW - antimicrobial stewardship KW - critically ill KW - antibiotics KW - pharmacokinetic/pharmacodynamic Y1 - 2022 U6 - https://doi.org/10.3390/antibiotics11060758 SN - 2079-6382 VL - 11 IS - 6 PB - MDPI CY - Basel ER - TY - JOUR A1 - Ehmann, Lisa A1 - Zoller, Michael A1 - Minichmayr, Iris K. A1 - Scharf, Christina A1 - Maier, Barbara A1 - Schmitt, Maximilian V. A1 - Hartung, Niklas A1 - Huisinga, Wilhelm A1 - Vogeser, Michael A1 - Frey, Lorenz A1 - Zander, Johannes A1 - Kloft, Charlotte T1 - Role of renal function in risk assessment of target non-attainment after standard dosing of meropenem in critically ill patients BT - a prospective observational study JF - Critical care N2 - Background: Severe bacterial infections remain a major challenge in intensive care units because of their high prevalence and mortality. Adequate antibiotic exposure has been associated with clinical success in critically ill patients. The objective of this study was to investigate the target attainment of standard meropenem dosing in a heterogeneous critically ill population, to quantify the impact of the full renal function spectrum on meropenem exposure and target attainment, and ultimately to translate the findings into a tool for practical application. Methods: A prospective observational single-centre study was performed with critically ill patients with severe infections receiving standard dosing of meropenem. Serial blood samples were drawn over 4 study days to determine meropenem serum concentrations. Renal function was assessed by creatinine clearance according to the Cockcroft and Gault equation (CLCRCG). Variability in meropenem serum concentrations was quantified at the middle and end of each monitored dosing interval. The attainment of two pharmacokinetic/pharmacodynamic targets (100% T->MIC, 50% T->4xMIC) was evaluated for minimum inhibitory concentration (MIC) values of 2 mg/L and 8 mg/L and standard meropenem dosing (1000 mg, 30-minute infusion, every 8 h). Furthermore, we assessed the impact of CLCRCG on meropenem concentrations and target attainment and developed a tool for risk assessment of target non-attainment. Results: Large inter-and intra-patient variability in meropenem concentrations was observed in the critically ill population (n = 48). Attainment of the target 100% T->MIC was merely 48.4% and 20.6%, given MIC values of 2 mg/L and 8 mg/L, respectively, and similar for the target 50% T->4xMIC. A hyperbolic relationship between CLCRCG (25-255 ml/minute) and meropenem serum concentrations at the end of the dosing interval (C-8h) was derived. For infections with pathogens of MIC 2 mg/L, mild renal impairment up to augmented renal function was identified as a risk factor for target non-attainment (for MIC 8 mg/L, additionally, moderate renal impairment). Conclusions: The investigated standard meropenem dosing regimen appeared to result in insufficient meropenem exposure in a considerable fraction of critically ill patients. An easy-and free-to-use tool (the MeroRisk Calculator) for assessing the risk of target non-attainment for a given renal function and MIC value was developed. KW - beta-Lactam KW - Intensive care KW - Pharmacokinetics/Pharmacodynamics KW - Target attainment KW - Renal function KW - Risk assessment tool KW - Continuous renal replacement therapy Y1 - 2017 U6 - https://doi.org/10.1186/s13054-017-1829-4 SN - 1466-609X SN - 1364-8535 VL - 21 PB - BioMed Central CY - London ER - TY - JOUR A1 - Stachanow, Viktoria A1 - Neumann, Uta A1 - Blankenstein, Oliver A1 - Bindellini, Davide A1 - Melin, Johanna A1 - Ross, Richard A1 - Whitaker, Martin J. J. A1 - Huisinga, Wilhelm A1 - Michelet, Robin A1 - Kloft, Charlotte T1 - Exploring dried blood spot cortisol concentrations as an alternative for monitoring pediatric adrenal insufficiency patients BT - a model-based analysis JF - Frontiers in pharmacology N2 - Congenital adrenal hyperplasia (CAH) is the most common form of adrenal insufficiency in childhood; it requires cortisol replacement therapy with hydrocortisone (HC, synthetic cortisol) from birth and therapy monitoring for successful treatment. In children, the less invasive dried blood spot (DBS) sampling with whole blood including red blood cells (RBCs) provides an advantageous alternative to plasma sampling. Potential differences in binding/association processes between plasma and DBS however need to be considered to correctly interpret DBS measurements for therapy monitoring. While capillary DBS samples would be used in clinical practice, venous cortisol DBS samples from children with adrenal insufficiency were analyzed due to data availability and to directly compare and thus understand potential differences between venous DBS and plasma. A previously published HC plasma pharmacokinetic (PK) model was extended by leveraging these DBS concentrations. In addition to previously characterized binding of cortisol to albumin (linear process) and corticosteroid-binding globulin (CBG; saturable process), DBS data enabled the characterization of a linear cortisol association with RBCs, and thereby providing a quantitative link between DBS and plasma cortisol concentrations. The ratio between the observed cortisol plasma and DBS concentrations varies highly from 2 to 8. Deterministic simulations of the different cortisol binding/association fractions demonstrated that with higher blood cortisol concentrations, saturation of cortisol binding to CBG was observed, leading to an increase in all other cortisol binding fractions. In conclusion, a mathematical PK model was developed which links DBS measurements to plasma exposure and thus allows for quantitative interpretation of measurements of DBS samples. KW - adrenal insufficiency KW - cortisol KW - dried blood spots KW - pediatrics KW - pharmacokinetics KW - binding KW - association KW - red blood cells Y1 - 2022 U6 - https://doi.org/10.3389/fphar.2022.819590 SN - 1663-9812 VL - 13 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Abiuso, Paolo A1 - Holubec, Viktor A1 - Anders, Janet A1 - Ye, Zhuolin A1 - Cerisola, Federico A1 - Perarnau-Llobet, Marti T1 - Thermodynamics and optimal protocols of multidimensional quadratic Brownian systems JF - Journal of physics communications N2 - We characterize finite-time thermodynamic processes of multidimensional quadratic overdamped systems. Analytic expressions are provided for heat, work, and dissipation for any evolution of the system covariance matrix. The Bures-Wasserstein metric between covariance matrices naturally emerges as the local quantifier of dissipation. General principles of how to apply these geometric tools to identify optimal protocols are discussed. Focusing on the relevant slow-driving limit, we show how these results can be used to analyze cases in which the experimental control over the system is partial. KW - stochastic thermodynamics KW - thermodynamic control KW - thermodynamic length KW - overdamped brownian systems Y1 - 2022 U6 - https://doi.org/10.1088/2399-6528/ac72f8 SN - 2399-6528 VL - 6 IS - 6 PB - IOP Publ. Ltd. CY - Bristol ER - TY - JOUR A1 - Glückler, Ramesh A1 - Herzschuh, Ulrike A1 - Kruse, Stefan A1 - Andreev, Andrei A1 - Vyse, Stuart Andrew A1 - Winkler, Bettina A1 - Biskaborn, Boris A1 - Pestryakova, Luidmila Agafyevna A1 - Dietze, Elisabeth T1 - Wildfire history of the boreal forest of south-western Yakutia (Siberia) over the last two millennia documented by a lake-sediment charcoal record JF - Biogeosciences : BG / European Geosciences Union N2 - Wildfires, as a key disturbance in forest ecosystems, are shaping the world's boreal landscapes. Changes in fire regimes are closely linked to a wide array of environmental factors, such as vegetation composition, climate change, and human activity. Arctic and boreal regions and, in particular, Siberian boreal forests are experiencing rising air and ground temperatures with the subsequent degradation of permafrost soils leading to shifts in tree cover and species composition. Compared to the boreal zones of North America or Europe, little is known about how such environmental changes might influence long-term fire regimes in Russia. The larch-dominated eastern Siberian deciduous boreal forests differ markedly from the composition of other boreal forests, yet data about past fire regimes remain sparse. Here, we present a high-resolution macroscopic charcoal record from lacustrine sediments of Lake Khamra (southwest Yakutia, Siberia) spanning the last ca. 2200 years, including information about charcoal particle sizes and morphotypes. Our results reveal a phase of increased charcoal accumulation between 600 and 900 CE, indicative of relatively high amounts of burnt biomass and high fire frequencies. This is followed by an almost 900-year-long period of low charcoal accumulation without significant peaks likely corresponding to cooler climate conditions. After 1750 CE fire frequencies and the relative amount of biomass burnt start to increase again, coinciding with a warming climate and increased anthropogenic land development after Russian colonization. In the 20th century, total charcoal accumulation decreases again to very low levels despite higher fire frequency, potentially reflecting a change in fire management strategies and/or a shift of the fire regime towards more frequent but smaller fires. A similar pattern for different charcoal morphotypes and comparison to a pollen and non-pollen palynomorph (NPP) record from the same sediment core indicate that broad-scale changes in vegetation composition were probably not a major driver of recorded fire regime changes. Instead, the fire regime of the last two millennia at Lake Khamra seems to be controlled mainly by a combination of short-term climate variability and anthropogenic fire ignition and suppression. Y1 - 2021 U6 - https://doi.org/10.5194/bg-18-4185-2021 SN - 1726-4170 SN - 1726-4189 VL - 18 IS - 13 SP - 4185 EP - 4209 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Glückler, Ramesh A1 - Geng, Rongwei A1 - Grimm, Lennart A1 - Baisheva, Izabella A1 - Herzschuh, Ulrike A1 - Stoof-Leichsenring, Kathleen R. A1 - Kruse, Stefan A1 - Andreev, Andrej Aleksandrovic A1 - Pestryakova, Luidmila A1 - Dietze, Elisabeth T1 - Holocene wildfire and vegetation dynamics in Central Yakutia, Siberia, reconstructed from lake-sediment proxies JF - Frontiers in Ecology and Evolution N2 - Wildfires play an essential role in the ecology of boreal forests. In eastern Siberia, fire activity has been increasing in recent years, challenging the livelihoods of local communities. Intensifying fire regimes also increase disturbance pressure on the boreal forests, which currently protect the permafrost beneath from accelerated degradation. However, long-term relationships between changes in fire regime and forest structure remain largely unknown. We assess past fire-vegetation feedbacks using sedimentary proxy records from Lake Satagay, Central Yakutia, Siberia, covering the past c. 10,800 years. Results from macroscopic and microscopic charcoal analyses indicate high amounts of burnt biomass during the Early Holocene, and that the present-day, low-severity surface fire regime has been in place since c. 4,500 years before present. A pollen-based quantitative reconstruction of vegetation cover and a terrestrial plant record based on sedimentary ancient DNA metabarcoding suggest a pronounced shift in forest structure toward the Late Holocene. Whereas the Early Holocene was characterized by postglacial open larch-birch woodlands, forest structure changed toward the modern, mixed larch-dominated closed-canopy forest during the Mid-Holocene. We propose a potential relationship between open woodlands and high amounts of burnt biomass, as well as a mediating effect of dense larch forest on the climate-driven intensification of fire regimes. Considering the anticipated increase in forest disturbances (droughts, insect invasions, and wildfires), higher tree mortality may force the modern state of the forest to shift toward an open woodland state comparable to the Early Holocene. Such a shift in forest structure may result in a positive feedback on currently intensifying wildfires. These new long-term data improve our understanding of millennial-scale fire regime changes and their relationships to changes of vegetation in Central Yakutia, where the local population is already being confronted with intensifying wildfire seasons. KW - fire KW - larch KW - boreal KW - forest KW - Russia KW - charcoal KW - pollen KW - ancient DNA Y1 - 2022 U6 - https://doi.org/10.3389/fevo.2022.962906 SN - 2296-701X VL - 10 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Lehmann, Nico A1 - Kuhn, Yves-Alain A1 - Keller, Martin A1 - Aye, Norman A1 - Herold, Fabian A1 - Draganski, Bogdan A1 - Taube, Wolfgang A1 - Taubert, Marco T1 - Brain activation during active balancing and its behavioral relevance in younger and older adults BT - a functional near-infrared spectroscopy (fNIRS) study JF - Frontiers in Aging Neuroscience N2 - Age-related deterioration of balance control is widely regarded as an important phenomenon influencing quality of life and longevity, such that a more comprehensive understanding of the neural mechanisms underlying this process is warranted. Specifically, previous studies have reported that older adults typically show higher neural activity during balancing as compared to younger counterparts, but the implications of this finding on balance performance remain largely unclear. Using functional near-infrared spectroscopy (fNIRS), differences in the cortical control of balance between healthy younger (n = 27) and older (n = 35) adults were explored. More specifically, the association between cortical functional activity and balance performance across and within age groups was investigated. To this end, we measured hemodynamic responses (i.e., changes in oxygenated and deoxygenated hemoglobin) while participants balanced on an unstable device. As criterion variables for brain-behavior-correlations, we also assessed postural sway while standing on a free-swinging platform and while balancing on wobble boards with different levels of difficulty. We found that older compared to younger participants had higher activity in prefrontal and lower activity in postcentral regions. Subsequent robust regression analyses revealed that lower prefrontal brain activity was related to improved balance performance across age groups, indicating that higher activity of the prefrontal cortex during balancing reflects neural inefficiency. We also present evidence supporting that age serves as a moderator in the relationship between brain activity and balance, i.e., cortical hemodynamics generally appears to be a more important predictor of balance performance in the older than in the younger. Strikingly, we found that age differences in balance performance are mediated by balancing-induced activation of the superior frontal gyrus, thus suggesting that differential activation of this region reflects a mechanism involved in the aging process of the neural control of balance. Our study suggests that differences in functional brain activity between age groups are not a mere by-product of aging, but instead of direct behavioral relevance for balance performance. Potential implications of these findings in terms of early detection of fall-prone individuals and intervention strategies targeting balance and healthy aging are discussed. KW - aging KW - neuroimaging KW - functional near-infrared spectroscopy (fNIRS) KW - balance KW - postural control KW - prefrontal cortex KW - neural inefficiency Y1 - 2022 U6 - https://doi.org/10.3389/fnagi.2022.828474 SN - 1663-4365 VL - 14 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Inceoglu, Fadil A1 - Shprits, Yuri Y. A1 - Heinemann, Stephan G. A1 - Bianco, Stefano T1 - Identification of coronal holes on AIA/SDO images using unsupervised machine learning JF - The astrophysical journal : an international review of spectroscopy and astronomical physics N2 - Through its magnetic activity, the Sun governs the conditions in Earth's vicinity, creating space weather events, which have drastic effects on our space- and ground-based technology. One of the most important solar magnetic features creating the space weather is the solar wind that originates from the coronal holes (CHs). The identification of the CHs on the Sun as one of the source regions of the solar wind is therefore crucial to achieve predictive capabilities. In this study, we used an unsupervised machine-learning method, k-means, to pixel-wise cluster the passband images of the Sun taken by the Atmospheric Imaging Assembly on the Solar Dynamics Observatory in 171, 193, and 211 angstrom in different combinations. Our results show that the pixel-wise k-means clustering together with systematic pre- and postprocessing steps provides compatible results with those from complex methods, such as convolutional neural networks. More importantly, our study shows that there is a need for a CH database where a consensus about the CH boundaries is reached by observers independently. This database then can be used as the "ground truth," when using a supervised method or just to evaluate the goodness of the models. Y1 - 2022 U6 - https://doi.org/10.3847/1538-4357/ac5f43 SN - 1538-4357 VL - 930 IS - 2 PB - IOP Publ. Ltd. CY - Bristol ER - TY - JOUR A1 - Huang, Sichao A1 - Stoof-Leichsenring, Kathleen R. A1 - Liu, Sisi A1 - Courtin, Jeremy A1 - Andreev, Andrej A. A1 - Pestryakova, Luidmila. A. A1 - Herzschuh, Ulrike T1 - Plant sedimentary ancient DNA from Far East Russia covering the last 28,000 years reveals different assembly rules in cold and warm climates JF - Frontiers in Ecology and Evolution N2 - Woody plants are expanding into the Arctic in response to the warming climate. The impact on arctic plant communities is not well understood due to the limited knowledge about plant assembly rules. Records of past plant diversity over long time series are rare. Here, we applied sedimentary ancient DNA metabarcoding targeting the P6 loop of the chloroplast trnL gene to a sediment record from Lake Ilirney (central Chukotka, Far Eastern Russia) covering the last 28 thousand years. Our results show that forb-rich steppe-tundra and dwarf-shrub tundra dominated during the cold climate before 14 ka, while deciduous erect-shrub tundra was abundant during the warm period since 14 ka. Larix invasion during the late Holocene substantially lagged behind the likely warmest period between 10 and 6 ka, where the vegetation biomass could be highest. We reveal highest richness during 28-23 ka and a second richness peak during 13-9 ka, with both periods being accompanied by low relative abundance of shrubs. During the cold period before 14 ka, rich plant assemblages were phylogenetically clustered, suggesting low genetic divergence in the assemblages despite the great number of species. This probably originates from environmental filtering along with niche differentiation due to limited resources under harsh environmental conditions. In contrast, during the warmer period after 14 ka, rich plant assemblages were phylogenetically overdispersed. This results from a high number of species which were found to harbor high genetic divergence, likely originating from an erratic recruitment process in the course of warming. Some of our evidence may be of relevance for inferring future arctic plant assembly rules and diversity changes. By analogy to the past, we expect a lagged response of tree invasion. Plant richness might overshoot in the short term; in the long-term, however, the ongoing expansion of deciduous shrubs will eventually result in a phylogenetically more diverse community. KW - sedimentary ancient DNA (sedaDNA) KW - metabarcoding KW - phylogenetic and taxonomic plant diversity KW - Arctic Russia KW - Siberia KW - holocene KW - glacial KW - treeline Y1 - 2021 U6 - https://doi.org/10.3389/fevo.2021.763747 SN - 2296-701X VL - 9 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Drozdov, Alexander A1 - Allison, Hayley J. A1 - Shprits, Yuri Y. A1 - Usanova, Maria E. A1 - Saikin, Anthony A1 - Wang, Dedong T1 - Depletions of Multi-MeV Electrons and their association to Minima in Phase Space Density JF - Geophysical research letters N2 - Fast-localized electron loss, resulting from interactions with electromagnetic ion cyclotron (EMIC) waves, can produce deepening minima in phase space density (PSD) radial profiles. Here, we perform a statistical analysis of local PSD minima to quantify how readily these are associated with radiation belt depletions. The statistics of PSD minima observed over a year are compared to the Versatile Electron Radiation Belts (VERB) simulations, both including and excluding EMIC waves. The observed minima distribution can only be achieved in the simulation including EMIC waves, indicating their importance in the dynamics of the radiation belts. By analyzing electron flux depletions in conjunction with the observed PSD minima, we show that, in the heart of the outer radiation belt (L* < 5), on average, 53% of multi-MeV electron depletions are associated with PSD minima, demonstrating that fast localized loss by interactions with EMIC waves are a common and crucial process for ultra-relativistic electron populations. KW - radiation belts KW - EMIC KW - VERB KW - PSD Y1 - 2022 U6 - https://doi.org/10.1029/2021GL097620 SN - 0094-8276 SN - 1944-8007 VL - 49 IS - 8 PB - American Geophysical Union CY - Washington ER - TY - JOUR A1 - Steirou, Eva A1 - Gerlitz, Lars A1 - Sun, Xun A1 - Apel, Heiko A1 - Agarwal, Ankit A1 - Totz, Sonja Juliana A1 - Merz, Bruno T1 - Towards seasonal forecasting of flood probabilities in Europe using climate and catchment information JF - Scientific reports N2 - We investigate whether the distribution of maximum seasonal streamflow is significantly affected by catchment or climate state of the season/month ahead. We fit the Generalized Extreme Value (GEV) distribution to extreme seasonal streamflow for around 600 stations across Europe by conditioning the GEV location and scale parameters on 14 indices, which represent the season-ahead climate or catchment state. The comparison of these climate-informed models with the classical GEV distribution, with time-constant parameters, suggests that there is a substantial potential for seasonal forecasting of flood probabilities. The potential varies between seasons and regions. Overall, the season-ahead catchment wetness shows the highest potential, although climate indices based on large-scale atmospheric circulation, sea surface temperature or sea ice concentration also show some skill for certain regions and seasons. Spatially coherent patterns and a substantial fraction of climate-informed models are promising signs towards early alerts to increase flood preparedness already a season ahead. Y1 - 2022 U6 - https://doi.org/10.1038/s41598-022-16633-1 SN - 2045-2322 VL - 12 IS - 1 PB - Nature portfolio CY - Berlin ER - TY - JOUR A1 - Rothe, Martin A1 - Zhao, Yuhang A1 - Kewes, Günter A1 - Kochovski, Zdravko A1 - Sigle, Wilfried A1 - van Aken, Peter A. A1 - Koch, Christoph A1 - Ballauff, Matthias A1 - Lu, Yan A1 - Benson, Oliver T1 - Silver nanowires with optimized silica coating as versatile plasmonic resonators JF - Scientific reports N2 - Metal nanoparticles are the most frequently used nanostructures in plasmonics. However, besides nanoparticles, metal nanowires feature several advantages for applications. Their elongation offers a larger interaction volume, their resonances can reach higher quality factors, and their mode structure provides better coupling into integrated hybrid dielectric-plasmonic circuits. It is crucial though, to control the distance of the wire to a supporting substrate, to another metal layer or to active materials with sub-nanometer precision. A dielectric coating can be utilized for distance control, but it must not degrade the plasmonic properties. In this paper, we introduce a controlled synthesis and coating approach for silver nanowires to fulfill these demands. We synthesize and characterize silver nanowires of around 70 nm in diameter. These nanowires are coated with nm-sized silica shells using a modified Stober method to achieve a homogeneous and smooth surface quality. We use transmission electron microscopy, dark-field microscopy and electron-energy loss spectroscopy to study morphology and plasmonic resonances of individual nanowires and quantify the influence of the silica coating. Thorough numerical simulations support the experimental findings showing that the coating does not deteriorate the plasmonic properties and thus introduce silver nanowires as usable building blocks for integrated hybrid plasmonic systems. Y1 - 2019 U6 - https://doi.org/10.1038/s41598-019-40380-5 SN - 2045-2322 VL - 9 PB - Nature Publ. Group CY - London ER - TY - JOUR A1 - de Gelder, Gino A1 - Fernandez-Blanco, David A1 - Melnick, Daniel A1 - Duclaux, Guillaume A1 - Bell, Rebecca E. A1 - Jara Muñoz, Julius A1 - Armijo, Rolando A1 - Lacassin, Robin T1 - Lithospheric flexure and rheology determined by climate cycle markers in the Corinth Rift JF - Scientific reports N2 - Geomorphic strain markers accumulating the effects of many earthquake cycles help to constrain the mechanical behaviour of continental rift systems as well as the related seismic hazards. In the Corinth Rift (Greece), the unique record of onshore and offshore markers of Pleistocene similar to 100-ka climate cycles provides an outstanding possibility to constrain rift mechanics over a range of timescales. Here we use high-resolution topography to analyse the 3D geometry of a sequence of Pleistocene emerged marine terraces associated with flexural rift-flank uplift. We integrate this onshore dataset with offshore seismic data to provide a synoptic view of the flexural deformation across the rift. This allows us to derive an average slip rate of 4.5-9.0 mm.yr(-1) on the master fault over the past similar to 610 ka and an uplift/ subsidence ratio of 1:1.1-2.4. We reproduce the observed flexure patterns, using 3 and 5-layered lithospheric scale finite element models. Modelling results imply that the observed elastic flexure is produced by coseismic slip along 40-60 degrees planar normal faults in the elastic upper crust, followed by postseismic viscous relaxation occurring within the basal lower crust or upper mantle. We suggest that such a mechanism may typify rapid localised extension of continental lithosphere. Y1 - 2019 U6 - https://doi.org/10.1038/s41598-018-36377-1 SN - 2045-2322 VL - 9 PB - Nature Publ. Group CY - London ER - TY - JOUR A1 - Freisleben, Roland A1 - Jara Muñoz, Julius A1 - Melnick, Daniel A1 - Miguel Martinez, Jose A1 - Strecker, Manfred T1 - Marine terraces of the last interglacial period along the Pacific coast of South America (1 degrees N-40 degrees S) JF - Earth system science data : ESSD N2 - Tectonically active coasts are dynamic environments characterized by the presence of multiple marine terraces formed by the combined effects of wave erosion, tectonic uplift, and sea-level oscillations at glacialcycle timescales. Well-preserved erosional terraces from the last interglacial sea-level highstand are ideal marker horizons for reconstructing past sea-level positions and calculating vertical displacement rates. We carried out an almost continuous mapping of the last interglacial marine terrace along similar to 5000 km of the western coast of South America between 1 degrees N and 40 degrees S. We used quantitatively replicable approaches constrained by published terrace-age estimates to ultimately compare elevations and patterns of uplifted terraces with tectonic and climatic parameters in order to evaluate the controlling mechanisms for the formation and preservation of marine terraces and crustal deformation. Uncertainties were estimated on the basis of measurement errors and the distance from referencing points. Overall, our results indicate a median elevation of 30.1 m, which would imply a median uplift rate of 0.22 m kyr(-1) averaged over the past similar to 125 kyr. The patterns of terrace elevation and uplift rate display high-amplitude (similar to 100-200 m) and long-wavelength (similar to 10(2) km) structures at the Manta Peninsula (Ecuador), the San Juan de Marcona area (central Peru), and the Arauco Peninsula (south-central Chile). Medium-wavelength structures occur at the Mejillones Peninsula and Topocalma in Chile, while short-wavelength (< 10 km) features are for instance located near Los Vilos, Valparaiso, and Carranza, Chile. We interpret the long-wavelength deformation to be controlled by deep-seated processes at the plate interface such as the subduction of major bathymetric anomalies like the Nazca and Carnegie ridges. In contrast, short-wavelength deformation may be primarily controlled by sources in the upper plate such as crustal faulting, which, however, may also be associated with the subduction of topographically less pronounced bathymetric anomalies. Latitudinal differences in climate additionally control the formation and preservation of marine terraces. Based on our synopsis we propose that increasing wave height and tidal range result in enhanced erosion and morphologically well-defined marine terraces in south-central Chile. Our study emphasizes the importance of using systematic measurements and uniform, quantitative methodologies to characterize and correctly interpret marine terraces at regional scales, especially if they are used to unravel the tectonic and climatic forcing mechanisms of their formation. This database is an integral part of the World Atlas of Last Interglacial Shorelines (WALIS), published online at https://doi.org/10.5281/zenodo.4309748 (Freisleben et al., 2020). Y1 - 2021 U6 - https://doi.org/10.5194/essd-13-2487-2021 SN - 1866-3508 SN - 1866-3516 VL - 13 IS - 6 SP - 2487 EP - 2513 PB - Copernics Publications CY - Katlenburg-Lindau ER - TY - JOUR A1 - Adolfs, Marjolijn A1 - Hoque, Mohammed Mainul A1 - Shprits, Yuri Y. T1 - Storm-time relative total electron content modelling using machine learning techniques JF - Remote sensing N2 - Accurately predicting total electron content (TEC) during geomagnetic storms is still a challenging task for ionospheric models. In this work, a neural-network (NN)-based model is proposed which predicts relative TEC with respect to the preceding 27-day median TEC, during storm time for the European region (with longitudes 30 degrees W-50 degrees E and latitudes 32.5 degrees N-70 degrees N). The 27-day median TEC (referred to as median TEC), latitude, longitude, universal time, storm time, solar radio flux index F10.7, global storm index SYM-H and geomagnetic activity index Hp30 are used as inputs and the output of the network is the relative TEC. The relative TEC can be converted to the actual TEC knowing the median TEC. The median TEC is calculated at each grid point over the European region considering data from the last 27 days before the storm using global ionosphere maps (GIMs) from international GNSS service (IGS) sources. A storm event is defined when the storm time disturbance index Dst drops below 50 nanotesla. The model was trained with storm-time relative TEC data from the time period of 1998 until 2019 (2015 is excluded) and contains 365 storms. Unseen storm data from 33 storm events during 2015 and 2020 were used to test the model. The UQRG GIMs were used because of their high temporal resolution (15 min) compared to other products from different analysis centers. The NN-based model predictions show the seasonal behavior of the storms including positive and negative storm phases during winter and summer, respectively, and show a mixture of both phases during equinoxes. The model's performance was also compared with the Neustrelitz TEC model (NTCM) and the NN-based quiet-time TEC model, both developed at the German Aerospace Agency (DLR). The storm model has a root mean squared error (RMSE) of 3.38 TEC units (TECU), which is an improvement by 1.87 TECU compared to the NTCM, where an RMSE of 5.25 TECU was found. This improvement corresponds to a performance increase by 35.6%. The storm-time model outperforms the quiet-time model by 1.34 TECU, which corresponds to a performance increase by 28.4% from 4.72 to 3.38 TECU. The quiet-time model was trained with Carrington averaged TEC and, therefore, is ideal to be used as an input instead of the GIM derived 27-day median. We found an improvement by 0.8 TECU which corresponds to a performance increase by 17% from 4.72 to 3.92 TECU for the storm-time model using the quiet-time-model predicted TEC as an input compared to solely using the quiet-time model. KW - ionosphere KW - relative total electron content KW - geomagnetic storms KW - neural KW - networks KW - NTCM KW - European storm-time model Y1 - 2022 U6 - https://doi.org/10.3390/rs14236155 SN - 2072-4292 VL - 14 IS - 23 PB - MDPI CY - Basel ER - TY - JOUR A1 - Smirnov, Artem A1 - Berrendorf, Max A1 - Shprits, Yuri Y. A1 - Kronberg, Elena A. A1 - Allison, Hayley J. A1 - Aseev, Nikita A1 - Zhelavskaya, Irina A1 - Morley, Steven K. A1 - Reeves, Geoffrey D. A1 - Carver, Matthew R. A1 - Effenberger, Frederic T1 - Medium energy electron flux in earth's outer radiation belt (MERLIN) BT - a Machine learning model JF - Space weather : the international journal of research and applications N2 - The radiation belts of the Earth, filled with energetic electrons, comprise complex and dynamic systems that pose a significant threat to satellite operation. While various models of electron flux both for low and relativistic energies have been developed, the behavior of medium energy (120-600 keV) electrons, especially in the MEO region, remains poorly quantified. At these energies, electrons are driven by both convective and diffusive transport, and their prediction usually requires sophisticated 4D modeling codes. In this paper, we present an alternative approach using the Light Gradient Boosting (LightGBM) machine learning algorithm. The Medium Energy electRon fLux In Earth's outer radiatioN belt (MERLIN) model takes as input the satellite position, a combination of geomagnetic indices and solar wind parameters including the time history of velocity, and does not use persistence. MERLIN is trained on >15 years of the GPS electron flux data and tested on more than 1.5 years of measurements. Tenfold cross validation yields that the model predicts the MEO radiation environment well, both in terms of dynamics and amplitudes o f flux. Evaluation on the test set shows high correlation between the predicted and observed electron flux (0.8) and low values of absolute error. The MERLIN model can have wide space weather applications, providing information for the scientific community in the form of radiation belts reconstructions, as well as industry for satellite mission design, nowcast of the MEO environment, and surface charging analysis. KW - machine learning KW - radiation belts KW - electron flux KW - empirical modeling KW - magnetosphere KW - electrons Y1 - 2020 U6 - https://doi.org/10.1029/2020SW002532 SN - 1542-7390 VL - 18 IS - 11 PB - American geophysical union, AGU CY - Washington ER - TY - JOUR A1 - Smirnov, Artem A1 - Shprits, Yuri Y. A1 - Allison, Hayley A1 - Aseev, Nikita A1 - Drozdov, Alexander A1 - Kollmann, Peter A1 - Wang, Dedong A1 - Saikin, Anthony T1 - Storm-Time evolution of the Equatorial Electron Pitch Angle Distributions in Earth's Outer Radiation Belt JF - Frontiers in astronomy and space sciences N2 - In this study we analyze the storm-time evolution of equatorial electron pitch angle distributions (PADs) in the outer radiation belt region using observations from the Magnetic Electron Ion Spectrometer (MagEIS) instrument aboard the Van Allen Probes in 2012-2019. The PADs are approximated using a sum of the first, third and fifth sine harmonics. Different combinations of the respective coefficients refer to the main PAD shapes within the outer radiation belt, namely the pancake, flat-top, butterfly and cap PADs. We conduct a superposed epoch analysis of 129 geomagnetic storms and analyze the PAD evolution for day and night MLT sectors. PAD shapes exhibit a strong energy-dependent response. At energies of tens of keV, the PADs exhibit little variation throughout geomagnetic storms. Cap PADs are mainly observed at energies < 300 keV, and their extent in L shrinks with increasing energy. The cap distributions transform into the pancake PADs around the main phase of the storm on the nightside, and then come back to their original shapes during the recovery phase. At higher energies on the dayside, the PADs are mainly pancake during pre-storm conditions and become more anisotropic during the main phase. The quiet-time butterfly PADs can be observed on the nightside at L> 5.6. During the main phase, butterfly PADs have stronger 90 degrees-minima and can be observed at lower L-shells (down to L = 5), then transitioning into flat-top PADs at L similar to 4.5 - 5 and pancake PADs at L < 4.5. The resulting PAD coefficients for different energies, locations and storm epochs can be used to test the wave models and physics-based radiation belt codes in terms of pitch angle distributions. KW - pitch angle KW - pitch angle distributions KW - electrons KW - radiation belts KW - magnetosphere KW - van alien probes Y1 - 2022 U6 - https://doi.org/10.3389/fspas.2022.836811 SN - 2296-987X VL - 9 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Kühn, Danilo A1 - Müller, Moritz A1 - Sorgenfrei, Nomi A1 - Giangrisostomi, Erika A1 - Jay, Raphael Martin A1 - Ovsyannikov, Ruslan A1 - Martensson, Nils A1 - Sanchez-Portal, Daniel A1 - Föhlisch, Alexander T1 - Directional sub-femtosecond charge transfer dynamics and the dimensionality of 1T-TaS2 JF - Scientific reports N2 - For the layered transition metal dichalcogenide 1T-TaS2, we establish through a unique experimental approach and density functional theory, how ultrafast charge transfer in 1T-TaS2 takes on isotropic three-dimensional character or anisotropic two-dimensional character, depending on the commensurability of the charge density wave phases of 1T-TaS2. The X-ray spectroscopic core-hole-clock method prepares selectively in-and out-of-plane polarized sulfur 3p orbital occupation with respect to the 1T-TaS2 planes and monitors sub-femtosecond wave packet delocalization. Despite being a prototypical two-dimensional material, isotropic three-dimensional charge transfer is found in the commensurate charge density wave phase (CCDW), indicating strong coupling between layers. In contrast, anisotropic two-dimensional charge transfer occurs for the nearly commensurate phase (NCDW). In direct comparison, theory shows that interlayer interaction in the CCDW phase - not layer stacking variations - causes isotropic three-dimensional charge transfer. This is presumably a general mechanism for phase transitions and tailored properties of dichalcogenides with charge density waves. Y1 - 2019 U6 - https://doi.org/10.1038/s41598-018-36637-0 SN - 2045-2322 VL - 9 IS - 488 PB - Nature Publ. Group CY - London ER - TY - JOUR A1 - Woodfield, Emma E. A1 - Horne, Richard B. A1 - Glauert, S. A. A1 - Menietti, J. D. A1 - Shprits, Yuri Y. A1 - Kurth, William S. T1 - Formation of electron radiation belts at Saturn by Z-mode wave acceleration JF - Nature Communications N2 - At Saturn electrons are trapped in the planet’s magnetic field and accelerated to relativistic energies to form the radiation belts, but how this dramatic increase in electron energy occurs is still unknown. Until now the mechanism of radial diffusion has been assumed but we show here that in-situ acceleration through wave particle interactions, which initial studies dismissed as ineffectual at Saturn, is in fact a vital part of the energetic particle dynamics there. We present evidence from numerical simulations based on Cassini spacecraft data that a particular plasma wave, known as Z-mode, accelerates electrons to MeV energies inside 4 RS (1 RS = 60,330 km) through a Doppler shifted cyclotron resonant interaction. Our results show that the Z-mode waves observed are not oblique as previously assumed and are much better accelerators than O-mode waves, resulting in an electron energy spectrum that closely approaches observed values without any transport effects included. Y1 - 2018 U6 - https://doi.org/10.1038/s41467-018-07549-4 SN - 2041-1723 VL - 9 PB - Nature Publ. Group CY - London ER - TY - JOUR A1 - Jara Muñoz, Julius A1 - Melnick, Daniel A1 - Pedoja, Kevin A1 - Strecker, Manfred T1 - TerraceM-2: A MatlabR (R) Interface for Mapping and Modeling Marine and Lacustrine Terraces JF - Frontiers in Earth Science N2 - The morphology of marine and lacustrine terraces has been largely used to measure past sea- and lake-level positions and estimate vertical deformation in a wealth of studies focused on climate and tectonic processes. To obtain accurate morphometric assessments of terrace morphology we present TerraceM-2, an improved version of our MatlabR (R) graphic-user interface that provides new methodologies for morphometric analyses as well as landscape evolution and fault-dislocation modeling. The new version includes novel routines to map the elevation and spatial distribution of terraces, to model their formation and evolution, and to estimate fault-slip rates from terrace deformation patterns. TerraceM-2 has significantly improves its processing speed and mapping capabilities, and includes separate functions for developing customized workflows beyond the graphic-user interface. We illustrate these new mapping and modeling capabilities with three examples: mapping lacustrine shorelines in the Dead Sea to estimate deformation across the Dead Sea Fault, landscape evolution modeling to estimate a history of uplift rates in southern Peru, and dislocation modeling of deformed marine terraces in California. These examples also illustrate the need to use topographic data of different resolutions. The new modeling and mapping routines of TerraceM-2 highlight the advantages of an integrated joint mapping and modeling approach to improve the efficiency and precision of coastal terrace metrics in both marine and lacustrine environments. KW - TerraceM KW - marine terraces KW - tectonic geomorphology KW - geomorphic markers KW - LiDAR KW - coastal geomorphology KW - neotectonics KW - morphometry Y1 - 2019 U6 - https://doi.org/10.3389/feart.2019.00255 SN - 2296-6463 VL - 7 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Kühn, Danilo A1 - Giangrisostomi, Erika A1 - Jay, Raphael Martin A1 - Sorgenfrei, Nomi A1 - Föhlisch, Alexander T1 - The influence of x-ray pulse length on space-charge effects in optical pump/x-ray probe photoemission JF - New journal of physics : the open-access journal for physics N2 - Pump-probe photoelectron spectroscopy (PES) is a versatile tool to investigate the dynamics of transient states of excited matter. Vacuum space-charge effects can mask these dynamics and complicate the interpretation of electron spectra. Here we report on space-charge effects in Au 4f photoemission from a polycrystalline gold surface, excited with moderately intense 90 ps (FWHM) soft x-ray probe pulses, under the influence of the Coulomb forces exerted by a pump electron cloud, which was produced by intense 40 fs laser pulses. The experimentally observed kinetic energy shift and spectral broadening of the Au 4f lines, measured with highly-efficient time-of-flight spectroscopy, are in good agreement with simulations utilizing a mean-field model of the electrostatic pump electron potential. This confirms that the line broadening is predominantly caused by variations in the take-off time of the probe electrons without appreciable influence of local scattering events. Our findings might be of general interest for pump-probe PES with picosecond-pulse-length sources. KW - space-charge effects KW - mean-field model KW - x-ray photoemission KW - electron spectroscopy KW - pump-probe KW - ARTOF Y1 - 2019 U6 - https://doi.org/10.1088/1367-2630/ab2f5c SN - 1367-2630 VL - 21 PB - IOP Publ. Ltd. CY - Bristol ER - TY - JOUR A1 - Busch, Aglaja A1 - Bangerter, Christian A1 - Mayer, Frank A1 - Baur, Heiner T1 - Reliability of the active knee joint position sense test and influence of limb dominance and sex JF - Scientific reports N2 - The output of a sensorimotor performance can be measured with the joint position sense (JPS) test. However, investigations of leg dominance, sex and quality measures on this test are limited. Therefore, these potential influencing factors as well as reliability and consistency measures were evaluated for angular reproduction performance and neuromuscular activity during the active knee JPS test in healthy participants. Twenty healthy participants (10 males; 10 females; age 29 +/- 8 years; height 165 +/- 39 cm; body mass 69 +/- 13 kg) performed a seated knee JPS test with a target angle of 50 degrees. Measurements were conducted in two sessions separated by two weeks and consisted of two blocks of continuous angular reproduction (three minutes each block). The difference between reproduced and target angle was identified as angular error measured by an electrogoniometer. During reproduction, the neuromuscular activity of the quadriceps muscle was assessed by surface electromyography. Neuromuscular activity was normalized to submaximal voluntary contraction (subMVC) and displayed per muscle and movement phase. Differences between leg dominance and sex were calculated using Friedman-test (alpha = 0.05). Reliability measures including intraclass correlation coefficient (ICC), Bland-Altman analysis (bias +/- limits of agreement (LoA)) and minimal detectable change (MDC) were analysed. No significant differences between leg dominance and sex were found in angular error and neuromuscular activity. Angular error demonstrated inter-session ICC scores of 0.424 with a bias of 2.4 degrees (+/- 2.4 degrees LoA) as well as MDC of 6.8 degrees and moderate intra-session ICC (0.723) with a bias of 1.4 degrees (+/- 1.65 degrees LoA) as well as MDC of 4.7 degrees. Neuromuscular activity for all muscles and movement phases illustrated inter-session ICC ranging from 0.432 to 0.809 with biases between - 2.5 and 13.6% subMVC and MDC from 13.4 to 63.9% subMVC. Intra-session ICC ranged from 0.705 to 0.987 with biases of - 7.7 to 2.4% subMVC and MDC of 2.7 to 46.5% subMVC. Leg dominance and sex seem not to influence angular reproduction performance and neuromuscular activity. Poor to excellent relative reliability paired with an acceptable consistency confirm findings of previous studies. Comparisons to pathological populations should be conducted with caution. Y1 - 2023 U6 - https://doi.org/10.1038/s41598-022-26932-2 SN - 2045-2322 VL - 13 PB - Macmillan Publishers Limited, part of Springer Nature CY - London ER - TY - JOUR A1 - Dumont, Hanna A1 - Ready, Douglas D. D. T1 - On the promise of personalized learning for educational equity JF - npj science of learning N2 - Students enter school with a vast range of individual differences, resulting from the complex interplay between genetic dispositions and unequal environmental conditions. Schools thus face the challenge of organizing instruction and providing equal opportunities for students with diverse needs. Schools have traditionally managed student heterogeneity by sorting students both within and between schools according to their academic ability. However, empirical evidence suggests that such tracking approaches increase inequalities. In more recent years, driven largely by technological advances, there have been calls to embrace students' individual differences in the classroom and to personalize students' learning experiences. A central justification for personalized learning is its potential to improve educational equity. In this paper, we discuss whether and under which conditions personalized learning can indeed increase equity in K-12 education by bringing together empirical and theoretical insights from different fields, including the learning sciences, philosophy, psychology, and sociology. We distinguish between different conceptions of equity and argue that personalized learning is unlikely to result in "equality of outcomes" and, by definition, does not provide "equality of inputs". However, if implemented in a high-quality way, personalized learning is in line with "adequacy" notions of equity, which aim to equip all students with the basic competencies to participate in society as active members and to live meaningful lives. KW - Education KW - Psychology KW - Sociology Y1 - 2023 U6 - https://doi.org/10.1038/s41539-023-00174-x SN - 2056-7936 VL - 8 IS - 1 PB - Nature Publishing Group CY - London ER - TY - JOUR A1 - Barra, Felipe A1 - Hovhannisyan, Karen V. A1 - Imparato, Alberto T1 - Quantum batteries at the verge of a phase transition JF - New journal of physics : the open-access journal for physics N2 - Starting from the observation that the reduced state of a system strongly coupled to a bath is, in general, an athermal state, we introduce and study a cyclic battery-charger quantum device that is in thermal equilibrium, or in a ground state, during the charge storing stage. The cycle has four stages: the equilibrium storage stage is interrupted by disconnecting the battery from the charger, then work is extracted from the battery, and then the battery is reconnected with the charger; finally, the system is brought back to equilibrium. At no point during the cycle are the battery-charger correlations artificially erased. We study the case where the battery and charger together comprise a spin-1/2 Ising chain, and show that the main characteristics-the extracted energy and the thermodynamic efficiency-can be enhanced by operating the cycle close to the quantum phase transition point. When the battery is just a single spin, we find that the output work and efficiency show a scaling behavior at criticality and derive the corresponding critical exponents. Due to always present correlations between the battery and the charger, operations that are equivalent from the perspective of the battery can entail different energetic costs for switching the battery-charger coupling. This happens only when the coupling term does not commute with the battery's bare Hamiltonian, and we use this purely quantum leverage to further optimize the performance of the device. KW - quantum batteries KW - quantum thermodynamics KW - quantum phase transition Y1 - 2022 U6 - https://doi.org/10.1088/1367-2630/ac43ed SN - 1367-2630 VL - 24 IS - 1 PB - IOP Publ. Ltd. CY - Bristol ER -