TY - JOUR A1 - Muldashev, Iskander A. A1 - Sobolev, Stephan T1 - What controls maximum magnitudes of giant subduction earthquakes? JF - Geochemistry, geophysics, geosystems N2 - Giant earthquakes with magnitudes above 8.5 occur only in subduction zones. Despite the developments made in observing large subduction zone earthquakes with geophysical instruments, the factors controlling the maximum size of these earthquakes are still poorly understood. Previous studies have suggested the importance of slab shape, roughness of the plate interface contact, state of the strain in the upper plate, thickness of sediments filling the trenches, and subduction rate. Here, we present 2-D cross-scale numerical models of seismic cycles for subduction zones with various geometries, subduction channel friction configurations, and subduction rates. We found that low-angle subduction and thick sediments in the subduction channel are the necessary conditions for generating giant earthquakes, while the subduction rate has a negligible effect. We suggest that these key parameters determine the maximum magnitude of a subduction earthquake by controlling the seismogenic zone width and smoothness of the subduction interface. This interpretation supports previous studies that are based upon observations and scaling laws. Our modeling results also suggest that low static friction in the sediment-filled subduction channel results in neutral or moderate compressive deformation in the overriding plate for low-angle subduction zones hosting giant earthquakes. These modeling results agree well with observations for the largest earthquakes. Based on our models we predict maximum magnitudes of subduction earthquakes worldwide, demonstrating the fit to magnitudes of all giant earthquakes of the 20th and 21st centuries and good agreement with the predictions based on statistical analyses of observations. KW - giant earthquakes KW - earthquake modeling KW - subduction Y1 - 2020 U6 - https://doi.org/10.1029/2020GC009145 SN - 1525-2027 VL - 21 IS - 9 PB - American Geophysical Union CY - Washington ER - TY - JOUR A1 - Schuster, Dirk T1 - Exclusive border crossing considerations on exclusive, inner-religious demarcations JF - Interdisciplinary journal for religion and transformation in contemporary society : J-RaT N2 - From 1933, the inner Protestant 'German Christians Church Movement' from Thuringia took control over some Protestant regional churches in Germany. For the German Christians the main motives of their agitation were the creation of a 'volkisch' belief system based on race, Christianity and 'dejudaization' (of Christianity).
Based on the theoretical considerations of spaces, boundaries and exclusion, the article uses the example of the German Christians to show under which conditions individuals are denied entry into an imaginary religious space. 'Exclusivist border crossings,' as this phenomena is named here on the theoretical perspective, can explain how religious arguments exclude people from entering a religious space such as salvation when the access criteria are linked to birth-related conditions. KW - space KW - border KW - social imaginaries KW - race KW - Third Reich KW - Protestantism Y1 - 2020 U6 - https://doi.org/10.30965/23642807-00502009 SN - 2365-3140 SN - 2364-2807 VL - 5 IS - 2 SP - 469 EP - 492 PB - Brill CY - Leiden ER - TY - JOUR A1 - Gross, Stephanie A1 - Claus, Philip A1 - Wohlsein, Peter A1 - Kesselring, Tina A1 - Lakemeyer, Jan A1 - Reckendorf, Anja A1 - Roller, Marco A1 - Tiedemann, Ralph A1 - Siebert, Ursula T1 - Indication of lethal interactions between a solitary bottlenose dolphin (Tursiops truncatus) and harbor porpoises (Phocoena phocoena) in the German Baltic Sea JF - BMC zoology N2 - Background Aggressive interactions between bottlenose dolphins (Tursiops truncatus) and harbor porpoises (Phocoena phocoena) have been reported in different parts of the world since the late 1990s. In the Baltic Sea, harbor porpoises are the only native cetacean species, while bottlenose dolphins may appear there temporarily. In the fall of 2016, a solitary male photo-identified bottlenose dolphin stayed in the German Baltic Sea of Schleswig-Holstein for 3 months. During that time, the necropsies of the stranded harbor porpoises revealed types of trauma of varying degrees in six animals, which is unusual in this area. The purpose of this study was to determine if the appearance of the bottlenose dolphin could be linked to the trauma of the harbor porpoise carcasses. Results Pathological findings in these animals included subcutaneous, thoracic and abdominal hemorrhages, multiple, mainly bilateral, rib fractures, and one instance of lung laceration. These findings correspond with the previously reported dolphin-caused injuries in other regions. Moreover, public sighting reports showed a spatial and temporal correlation between the appearance of the dolphin and the stranding of fatally injured harbor porpoises. Conclusion Despite the fact that no attack has been witnessed in German waters to date, our findings indicate the first record of lethal interactions between a bottlenose dolphin and harbor porpoises in the German Baltic Sea. Furthermore, to our knowledge, this is the first report of porpoise aggression by a socially isolated bottlenose dolphin. KW - Cetaceans KW - Interspecific aggression KW - Porpicide KW - Blunt trauma KW - Mortality KW - Stranding Y1 - 2020 U6 - https://doi.org/10.1186/s40850-020-00061-7 SN - 2056-3132 VL - 5 IS - 1 PB - BMC CY - London ER - TY - JOUR A1 - Koonce, Michael A1 - Tikhonenko, Irina A1 - Gräf, Ralph T1 - Dictyostelium cell fixation BT - two simple tricks JF - Methods and protocols N2 - We share two simple modifications to enhance the fixation and imaging of relatively small, motile, and rounded model cells. These include cell centrifugation and the addition of trace amounts of glutaraldehyde to existing fixation methods. Though they need to be carefully considered in each context, they have been useful to our studies of the spatial relationships of the microtubule cytoskeletal system. KW - Dictyostelium KW - cell fixation KW - microscopy KW - microtubule KW - cytoskeleton Y1 - 2020 U6 - https://doi.org/10.3390/mps3030047 SN - 2409-9279 VL - 3 IS - 3 PB - MDPI CY - Basel ER - TY - JOUR A1 - Börnert-Ringleb, Moritz A1 - Westphal, Andrea A1 - Zaruba, Nicole A1 - Gutmann, Franziska A1 - Vock, Miriam T1 - The relationship between attitudes toward inclusion, beliefs about teaching and learning, and subsequent automatic evaluations amongst student teachers JF - Frontiers in education N2 - Teachers' attitudes toward inclusion are frequently cited as being an important predictor of how successfully a given inclusive school system is implemented. At the same time, beliefs about the nature of teaching and learning are discussed as a possible predictor of attitudes toward inclusion. However, more recent research emphasizes the need of considering implicit processes, such as automatic evaluations, when describing attitudes and beliefs. Previous evidence on the association of attitudes toward inclusion and beliefs about teaching and learning is solely based on explicit reports. Therefore, this study aims to examine the relationship between attitudes toward inclusion, beliefs about teaching and learning, and the subsequent automatic evaluations of pre-service teachers (N = 197). The results revealed differences between pre-service teachers' explicit attitudes/beliefs and their subsequent automatic evaluations. Differences in the relationship between attitudes toward inclusion and beliefs about teaching and learning occur when teachers focus either on explicit measures or automatic evaluations. These differences might be due to different facets of the same attitude object being represented. Relying solely on either explicit measures or automatic evaluations at the exclusion of the other might lead to erroneous assumptions about the relation of attitudes toward inclusion and beliefs about teaching and learning. KW - inclusion KW - attitudes KW - teaching KW - automatic evaluation KW - beliefs KW - implicit Y1 - 2020 U6 - https://doi.org/10.3389/feduc.2020.584464 SN - 2504-284X VL - 5 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Hudson, Paul A1 - Hagedoorn, Liselotte A1 - Bubeck, Philip T1 - Potential linkages between social capital, flood risk perceptions, and self-efficacy JF - International journal of disaster risk science N2 - A growing focus is being placed on both individuals and communities to adapt to flooding as part of the Sendai Framework for Disaster Risk Reduction 2015-2030. Adaptation to flooding requires sufficient social capital (linkages between members of society), risk perceptions (understanding of risk), and self-efficacy (self-perceived ability to limit disaster impacts) to be effective. However, there is limited understanding of how social capital, risk perceptions, and self-efficacy interact. We seek to explore how social capital interacts with variables known to increase the likelihood of successful adaptation. To study these linkages we analyze survey data of 1010 respondents across two communities in Thua Tien-Hue Province in central Vietnam, using ordered probit models. We find positive correlations between social capital, risk perceptions, and self-efficacy overall. This is a partly contrary finding to what was found in previous studies linking these concepts in Europe, which may be a result from the difference in risk context. The absence of an overall negative exchange between these factors has positive implications for proactive flood risk adaptation. KW - flood risk KW - protection motivation theory KW - risk perceptions KW - social KW - capital KW - self-efficacy KW - Vietnam Y1 - 2020 U6 - https://doi.org/10.1007/s13753-020-00259-w SN - 2095-0055 SN - 2192-6395 VL - 11 IS - 3 SP - 251 EP - 262 PB - Springer CY - Berlin ER - TY - JOUR A1 - Kolyvushko, Oleksandr A1 - Latzke, Juliane A1 - Dahmani, Ismail A1 - Osterrieder, Nikolaus A1 - Chiantia, Salvatore A1 - Azab, Walid T1 - Differentially-charged liposomes interact with alphaherpesviruses and interfere with virus entry JF - Pathogens N2 - Exposure of phosphatidylserine (PS) in the outer leaflet of the plasma membrane is induced by infection with several members of the Alphaherpesvirinae subfamily. There is evidence that PS is used by the equine herpesvirus type 1 (EHV-1) during entry, but the exact role of PS and other phospholipids in the entry process remains unknown. Here, we investigated the interaction of differently charged phospholipids with virus particles and determined their influence on infection. Our data show that liposomes containing negatively charged PS or positively charged DOTAP (N-[1-(2,3-Dioleoyloxy)propyl]-N,N,N-trimethylammonium) inhibited EHV-1 infection, while neutral phosphatidylcholine (PC) had no effect. Inhibition of infection with PS was transient, decreased with time, and was dose dependent. Our findings indicate that both cationic and anionic phospholipids can interact with the virus and reduce infectivity, while, presumably, acting through different mechanisms. Charged phospholipids were found to have antiviral effects and may be used to inhibit EHV-1 infection. KW - alphaherpesvirus KW - EHV-1 KW - phosphatidylserine KW - inhibition KW - pathogen host KW - interaction Y1 - 2020 U6 - https://doi.org/10.3390/pathogens9050359 SN - 2076-0817 VL - 9 IS - 5 PB - MDPI CY - Basel ER - TY - JOUR A1 - Mendel, Ralf R. A1 - Hercher, Thomas W. A1 - Zupok, Arkadiusz A1 - Hasnat, Muhammad Abrar A1 - Leimkühler, Silke T1 - The requirement of inorganic Fe-S clusters for the biosynthesis of the organometallic molybdenum cofactor JF - Inorganics : open access journal N2 - Iron-sulfur (Fe-S) clusters are essential protein cofactors. In enzymes, they are present either in the rhombic [2Fe-2S] or the cubic [4Fe-4S] form, where they are involved in catalysis and electron transfer and in the biosynthesis of metal-containing prosthetic groups like the molybdenum cofactor (Moco). Here, we give an overview of the assembly of Fe-S clusters in bacteria and humans and present their connection to the Moco biosynthesis pathway. In all organisms, Fe-S cluster assembly starts with the abstraction of sulfur froml-cysteine and its transfer to a scaffold protein. After formation, Fe-S clusters are transferred to carrier proteins that insert them into recipient apo-proteins. In eukaryotes like humans and plants, Fe-S cluster assembly takes place both in mitochondria and in the cytosol. Both Moco biosynthesis and Fe-S cluster assembly are highly conserved among all kingdoms of life. Moco is a tricyclic pterin compound with molybdenum coordinated through its unique dithiolene group. Moco biosynthesis begins in the mitochondria in a Fe-S cluster dependent step involving radical/S-adenosylmethionine (SAM) chemistry. An intermediate is transferred to the cytosol where the dithiolene group is formed, to which molybdenum is finally added. Further connections between Fe-S cluster assembly and Moco biosynthesis are discussed in detail. KW - Moco biosynthesis KW - Fe-S cluster assembly KW - l-cysteine desulfurase KW - ISC KW - SUF KW - NIF KW - iron KW - molybdenum KW - sulfur Y1 - 2020 U6 - https://doi.org/10.3390/inorganics8070043 SN - 2304-6740 VL - 8 IS - 7 PB - MDPI CY - Basel ER - TY - JOUR A1 - Levy, Jessica A1 - Mussack, Dominic A1 - Brunner, Martin A1 - Keller, Ulrich A1 - Cardoso-Leite, Pedro A1 - Fischbach, Antoine T1 - Contrasting classical and machine learning approaches in the estimation of value-added scores in large-scale educational data JF - Frontiers in psychology N2 - There is no consensus on which statistical model estimates school value-added (VA) most accurately. To date, the two most common statistical models used for the calculation of VA scores are two classical methods: linear regression and multilevel models. These models have the advantage of being relatively transparent and thus understandable for most researchers and practitioners. However, these statistical models are bound to certain assumptions (e.g., linearity) that might limit their prediction accuracy. Machine learning methods, which have yielded spectacular results in numerous fields, may be a valuable alternative to these classical models. Although big data is not new in general, it is relatively new in the realm of social sciences and education. New types of data require new data analytical approaches. Such techniques have already evolved in fields with a long tradition in crunching big data (e.g., gene technology). The objective of the present paper is to competently apply these "imported" techniques to education data, more precisely VA scores, and assess when and how they can extend or replace the classical psychometrics toolbox. The different models include linear and non-linear methods and extend classical models with the most commonly used machine learning methods (i.e., random forest, neural networks, support vector machines, and boosting). We used representative data of 3,026 students in 153 schools who took part in the standardized achievement tests of the Luxembourg School Monitoring Program in grades 1 and 3. Multilevel models outperformed classical linear and polynomial regressions, as well as different machine learning models. However, it could be observed that across all schools, school VA scores from different model types correlated highly. Yet, the percentage of disagreements as compared to multilevel models was not trivial and real-life implications for individual schools may still be dramatic depending on the model type used. Implications of these results and possible ethical concerns regarding the use of machine learning methods for decision-making in education are discussed. KW - value-added modeling KW - school effectiveness KW - machine learning KW - model KW - comparison KW - longitudinal data Y1 - 2020 U6 - https://doi.org/10.3389/fpsyg.2020.02190 SN - 1664-1078 VL - 11 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Cavael, Ulrike A1 - Diehl, Katharina A1 - Lentzsch, Peter T1 - Assessment of growth suppression in apple production with replant soils JF - Ecological indicators : integrating monitoring, assessment and management N2 - Apple replant disease (ARD) is a specific apple-related form of soil fertility loss due to unidentified causes and is also known as soil fatigue. The effect typically appears in monoculture production sites and leads to production decreases of up to 50%, even though the cultivation practice remains the same. However, an indication of replant disease is challenged by the lack of specification of the particular microbial group responsible for ARD. The objective of this study was to establish an algorithm for estimating growth suppression in orchards irrespective of the unknowns in the complex causal relationship by assessing plant-soil interaction in the orchard several years after planting. Based on a comparison between no-replant and replant soils, the Alternaria group (Ag) was identified as a soil-fungal population responding to replant with abundance. The trunk cross-sectional area (CSA) was found to be a practical and robust parameter representing below-ground and above-ground tree performance. Suppression of tree vigour was therefore calculated by dividing the two inversely related parameters, Q = ln(Ag)/CSA, as a function of soil-fungal proportions and plant responses at the single-tree level. On this basis, five clusters of tree vigour suppression (Q) were defined: (1) no tree vigour suppression/vital (0%), (2) escalating (- 38%), (3) strong (- 53%), (4) very strong (- 62%), and (5) critical (- 74%). By calculating Q at the level of the single tree, trees were clustered according to tree vigour suppression. The weighted frequency of clusters in the field allowed replant impact to be quantified at field level. Applied to a case study on sandy brown, dry diluvial soils in Brandenburg, Germany, the calculated tree vigour suppression was 46% compared to the potential tree vigour on no-replant soil in the same field. It is highly likely that the calculated growth suppression corresponds to ARD-impact This result is relevant for identifying functional changes in soil and for monitoring the economic effects of soil fatigue in apple orchards, particularly where long-period crop rotation or plot exchange are improbable. KW - orchard management KW - trunk cross-sectional area KW - alternaria group KW - apple KW - production KW - soil fatigue KW - apple replant disease Y1 - 2020 U6 - https://doi.org/10.1016/j.ecolind.2019.105846 SN - 1470-160X SN - 1872-7034 VL - 109 PB - Elsevier Science CY - Amsterdam ER - TY - JOUR A1 - Ozcelikay, Goksu A1 - Kurbanoglu, Sevinc A1 - Yarman, Aysu A1 - Scheller, Frieder W. A1 - Ozkan, Sibel A. T1 - Au-Pt nanoparticles based molecularly imprinted nanosensor for electrochemical detection of the lipopeptide antibiotic drug Daptomycin JF - Sensors and actuators : B, Chemical N2 - In this work, a novel electrochemical molecularly imprinted polymer (MIP) sensor for the detection of the lipopeptide antibiotic Daptomycin (DAP) is presented which integrates gold decorated platinum nanoparticles (Au-Pt NPs) into the nanocomposite film. The sensor was prepared by electropolymerization of o-phenylenediamine (o-PD) in the presence of DAP using cyclic voltammetry. Cyclic voltammetry and differential pulse voltammetry were applied to follow the changes in the MIP-layer related to rebinding and removal of the target DAP by using the redox marker [Fe(CN)(6)](3-/4-). Under optimized operational conditions, the MIP/Au-Pt NPs/ GCE nanosensor exhibits a linear response in the range of 1-20 pM towards DAP. The limit of detection and limit of quantification were determined to be 0.161pM +/- 0.012 and 0.489pM +/- 0.012, respectively. The sensitivity towards the antibiotics Vancomycin and Erythromycin and the amino acids glycine and tryptophan was below 7 percent as compared with DAP. Moreover, the nanosensor was also successfully used for the detection of DAP in deproteinated human serum samples. KW - molecularly imprinted polymer KW - Daptomycin KW - platinum nanoparticles KW - gold KW - nanoparticles KW - modified electrodes Y1 - 2020 U6 - https://doi.org/10.1016/j.snb.2020.128285 SN - 0925-4005 VL - 320 PB - Elsevier Science CY - Amsterdam ER - TY - JOUR A1 - Schroedter, Linda A1 - Schneider, Roland A1 - Remus, Lisa A1 - Venus, Joachim T1 - L-(+)-lactic acid from reed BT - comparing various resources for the nutrient provision of B. coagulans JF - Resources N2 - Biotechnological production of lactic acid (LA) is based on the so-called first generation feedstocks, meaning sugars derived from food and feed crops such as corn, sugarcane and cassava. The aim of this study was to exploit the potential of a second generation resource: Common reed (Phragmites australis) is a powerfully reproducing sweet grass which grows in wetlands and creates vast monocultural populations. This lignocellulose biomass bears the possibility to be refined to value-added products, without competing with agro industrial land. Besides utilizing reed as a renewable and inexpensive substrate, low-cost nutritional supplementation was analyzed for the fermentation of thermophilicBacilluscoagulans.Various nutritional sources such as baker's and brewer's yeast, lucerne green juice and tryptone were investigated for the replacement of yeast extract. The structure of the lignocellulosic material was tackled by chemical treatment (1% NaOH) and enzymatic hydrolysis (Cellic(R)CTec2).B.coagulansDSM ID 14-300 was employed for the homofermentative conversion of the released hexose and pentose sugars to polymerizable L-(+)-LA of over 99.5% optical purity. The addition of autolyzed baker's yeast led to the best results of fermentation, enabling an LA titer of 28.3 g L(-1)and a yield of 91.6%. KW - lignocellulose KW - reed KW - Phragmites australis KW - lactic acid KW - Bacillus KW - coagulans Y1 - 2020 U6 - https://doi.org/10.3390/resources9070089 SN - 2079-9276 VL - 9 IS - 7 PB - MDPI CY - Basel ER - TY - JOUR A1 - Stich, Daniel A1 - Martin, Rosa A1 - Morales, Jose A1 - Lopez-Comino, Jose Angel A1 - Mancilla, Flor de Lis T1 - Slip partitioning in the 2016 Alboran Sea earthquake sequence (western Mediterranean) JF - Frontiers in Earth Science N2 - AM(W)= 5.1 earthquake on January 21st, 2016 marked the beginning of a significant seismic sequence in the southern Alboran Sea, culminating in aM(W)= 6.3 earthquake on January 25th, and continuing with further moderate magnitude earthquakes until March. We use data from 35 seismic broadband stations in Spain, Morocco and Portugal to relocate the seismicity, estimate seismic moment tensors, and isolate regional apparent source time functions for the main earthquake. Relocation and regional moment tensor inversion consistently yield very shallow depths for the majority of events. We obtain 50 moment tensors for the sequence, showing a mixture of strike-slip faulting for the foreshock and the main event and reverse faulting for the major aftershocks. The leading role of reverse focal mechanisms among the aftershocks may be explained by the geometry of the fault network. The mainshock nucleates at a bend along the left-lateral Al-Idrisi fault, introducing local transpression within the transtensional Alboran Basin. The shallow depths of the 2016 Alboran Sea earthquakes may favor slip-partitioning on the involved faults. Apparent source durations for the main event suggest a similar to 21 km long, asymmetric rupture that propagates primarily toward NE into the restraining fault segment, with fast rupture speed of similar to 3.0 km/s. Consistently, the inversion for laterally variable fault displacement situates the main slip in the restraining segment. The partitioning into strike-slip rupture and dip-slip aftershocks confirms a non-optimal orientation of this segment, and suggests that the 2016 event settled a slip deficit from previous ruptures that could not propagate into the stronger restraining segment. KW - slip partitioning KW - fault bend KW - moment tensor KW - source time function KW - shallow earthquakes Y1 - 2020 U6 - https://doi.org/10.3389/feart.2020.587356 SN - 2296-6463 VL - 8 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Crisologo, Irene A1 - Heistermann, Maik T1 - Using ground radar overlaps to verify the retrieval of calibration bias estimates from spaceborne platforms JF - Atmospheric measurement techniques : an interactive open access journal of the European Geosciences Union N2 - Many institutions struggle to tap into the potential of their large archives of radar reflectivity: these data are often affected by miscalibration, yet the bias is typically unknown and temporally volatile. Still, relative calibration techniques can be used to correct the measurements a posteriori. For that purpose, the usage of spaceborne reflectivity observations from the Tropical Rainfall Measuring Mission (TRMM) and Global Precipitation Measurement (GPM) platforms has become increasingly popular: the calibration bias of a ground radar (GR) is estimated from its average reflectivity difference to the spaceborne radar (SR). Recently, Crisologo et al. (2018) introduced a formal procedure to enhance the reliability of such estimates: each match between SR and GR observations is assigned a quality index, and the calibration bias is inferred as a quality-weighted average of the differences between SR and GR. The relevance of quality was exemplified for the Subic S-band radar in the Philippines, which is greatly affected by partial beam blockage. The present study extends the concept of quality-weighted averaging by accounting for path-integrated attenuation (PIA) in addition to beam blockage. This extension becomes vital for radars that operate at the C or X band. Correspondingly, the study setup includes a C-band radar that substantially overlaps with the S-band radar. Based on the extended quality-weighting approach, we retrieve, for each of the two ground radars, a time series of calibration bias estimates from suitable SR overpasses. As a result of applying these estimates to correct the ground radar observations, the consistency between the ground radars in the region of overlap increased substantially. Furthermore, we investigated if the bias estimates can be interpolated in time, so that ground radar observations can be corrected even in the absence of prompt SR overpasses. We found that a moving average approach was most suitable for that purpose, although limited by the absence of explicit records of radar maintenance operations. Y1 - 2020 U6 - https://doi.org/10.5194/amt-13-645-2020 SN - 1867-1381 SN - 1867-8548 VL - 13 IS - 2 SP - 645 EP - 659 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Pauly, Dennis Nikolas A1 - Nottbusch, Guido T1 - The Influence of the German Capitalization Rules on Reading JF - Frontiers in Communication N2 - German orthography systematically marks all nouns (even other nominalized word classes) by capitalizing their first letter. It is often claimed that readers benefit from the uppercase-letter syntactic and semantic information, which makes the processing of sentences easier (e.g., Bock et al., 1985, 1989). In order to test this hypothesis, we asked 54 German readers to read single sentences systematically manipulated by a target word (N). In the experimental condition (EXP), we used semantic priming (in the following example: sick -> cold) in order to build up a strong expectation of a noun, which was actually an attribute for the following noun (N+1) (translated to English e.g., "The sick writer had a cold (N) nose (N+1) ..."). The sentences in the control condition were built analogously, but word N was purposefully altered (keeping word length and frequency constant) to make its interpretation as a noun extremely unlikely (e.g., "The sick writer had a blue (N) nose (N+1) ..."). In both conditions, the sentences were presented either following German standard orthography (Cap) or in lowercase spelling (NoCap). The capitalized nouns in the EXP/Cap condition should then prevent garden-path parsing, as capital letters can be recognized parafoveally. However, in the EXP/NoCap condition, we expected a garden-path effect on word N+1 affecting first-pass fixations and the number of regressions, as the reader realizes that word N is instead an adjective. As the control condition does not include a garden-path, we expected to find (small) effects of the violation of the orthographic rule in the CON/NoCap condition, but no garden-path effect. As a global result, it can be stated that reading sentences in which nouns are not marked by a majuscule slows a native German reader down significantly, but from an absolute point of view, the effect is small. Compared with other manipulations (e.g., transpositions or substitutions), a lowercase letter still represents the correct allograph in the correct position without affecting phonology. Furthermore, most German readers do have experience with other alphabetic writing systems that lack consistent noun capitalization, and in (private) digital communication lowercase nouns are quite common. Although our garden-path sentences did not show the desired effect, we found an indication of grammatical pre-processing enabled by the majuscule in the regularly spelled sentences: In the case of high noun frequency, we post hoc located parafovea-on-fovea effects, i.e., longer fixation durations, on the attributive adjective (word N). These benefits of capitalization could only be detected under specific circumstances. In other cases, we conclude that longer reading durations are mainly the result of disturbance in readers' habituation when the expected capitalization is missing. KW - orthography KW - eye-tracking KW - reading KW - noun KW - parafoveal and foveal KW - processing Y1 - 2020 U6 - https://doi.org/10.3389/fcomm.2020.00015 SN - 2297-900X VL - 5 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Sanchez Garcia, Maria Clemencia T1 - Las unidades fraseológicas del parlache como elementos evocadores de la oralidad ficcional en la novela Rosario Tijeras, de Jorge Franco y su traducción al alemán T1 - Phraseological units of the parlache as evocative elements of the fictional orality in the German translation of Jorge Franco’s 'Rosario Tijeras' JF - Lingüística y literatura N2 - Este estudioanalizócómose evoca la oralidad ficcional en la novela Rosario Tijerasa través de la variación lingüística. Para ello, se analizóun corpus de veinteunidades fraseológicas presentes en la novela y su traducción al alemán. En esta novela negra, el autor recurrióa un lenguaje coloquial llamado parlache. Este artículo, por tanto,se pretenderá establecer cómo estas unidades fraseológicas típicas del parlachecontribuyerona la construcción de un diálogo hablado verosímil, además de determinar las divergencias de traducción y profundizar en la descripción de la variación lingüística a través de las unidades fraseológicas. N2 - This study analysed how fictive orality is evoked, through linguistic variation, in the novel Rosario Tijeras, through a corpus analysis of 20 phraseological units belonging to the novel and their German translation. In this thriller, Franco used a colloquial language called parlache. Thus, this article will attempt to establish how these parlache’s phraseological units contributed to the construction of a believable spoken dialogue and will also analyze translation divergences and the description of linguistic variation in literary translation. KW - oralidad ficcional KW - parlache KW - unidad fraseológica KW - variación lingüística KW - novela negra Y1 - 2020 U6 - https://doi.org/10.17533/udea.lyl.n77a17 SN - 0120-5587 SN - 2422-3174 VL - 41 IS - 77 SP - 385 EP - 409 PB - Universidad de Antioquia CY - Medellín ER - TY - JOUR A1 - Maoutsa, Dimitra A1 - Reich, Sebastian A1 - Opper, Manfred T1 - Interacting particle solutions of Fokker–Planck equations through gradient–log–density estimation JF - Entropy N2 - Fokker-Planck equations are extensively employed in various scientific fields as they characterise the behaviour of stochastic systems at the level of probability density functions. Although broadly used, they allow for analytical treatment only in limited settings, and often it is inevitable to resort to numerical solutions. Here, we develop a computational approach for simulating the time evolution of Fokker-Planck solutions in terms of a mean field limit of an interacting particle system. The interactions between particles are determined by the gradient of the logarithm of the particle density, approximated here by a novel statistical estimator. The performance of our method shows promising results, with more accurate and less fluctuating statistics compared to direct stochastic simulations of comparable particle number. Taken together, our framework allows for effortless and reliable particle-based simulations of Fokker-Planck equations in low and moderate dimensions. The proposed gradient-log-density estimator is also of independent interest, for example, in the context of optimal control. KW - stochastic systems KW - Fokker-Planck equation KW - interacting particles KW - multiplicative noise KW - gradient flow KW - stochastic differential equations Y1 - 2020 U6 - https://doi.org/10.3390/e22080802 SN - 1099-4300 VL - 22 IS - 8 PB - MDPI CY - Basel ER - TY - JOUR A1 - Krasotkina, Anna A1 - Götz, Antonia A1 - Höhle, Barbara A1 - Schwarzer, Gudrun T1 - Infants’ gaze patterns for same-race and other-race faces, and the other-race effect JF - Brain Sciences N2 - The other-race effect (ORE) can be described as difficulties in discriminating between faces of ethnicities other than one's own, and can already be observed at approximately 9 months of age. Recent studies also showed that infants visually explore same-and other-race faces differently. However, it is still unclear whether infants' looking behavior for same- and other-race faces is related to their face discrimination abilities. To investigate this question we conducted a habituation-dishabituation experiment to examine Caucasian 9-month-old infants' gaze behavior, and their discrimination of same- and other-race faces, using eye-tracking measurements. We found that infants looked longer at the eyes of same-race faces over the course of habituation, as compared to other-race faces. After habituation, infants demonstrated a clear other-race effect by successfully discriminating between same-race faces, but not other-race faces. Importantly, the infants' ability to discriminate between same-race faces significantly correlated with their fixation time towards the eyes of same-race faces during habituation. Thus, our findings suggest that for infants old enough to begin exhibiting the ORE, gaze behavior during habituation is related to their ability to differentiate among same-race faces, compared to other-race faces. KW - eye-tracking KW - infancy KW - habituation KW - other-race effect KW - face KW - discrimination Y1 - 2020 U6 - https://doi.org/10.3390/brainsci10060331 SN - 2076-3425 VL - 10 IS - 6 PB - Brain Sciences CY - Basel ER - TY - JOUR A1 - Perera, Upeksha A1 - Böckmann, Christine T1 - Solutions of Sturm-Liouville problems JF - Mathematics N2 - This paper further improves the Lie group method with Magnus expansion proposed in a previous paper by the authors, to solve some types of direct singular Sturm-Liouville problems. Next, a concrete implementation to the inverse Sturm-Liouville problem algorithm proposed by Barcilon (1974) is provided. Furthermore, computational feasibility and applicability of this algorithm to solve inverse Sturm-Liouville problems of higher order (for n=2,4) are verified successfully. It is observed that the method is successful even in the presence of significant noise, provided that the assumptions of the algorithm are satisfied. In conclusion, this work provides a method that can be adapted successfully for solving a direct (regular/singular) or inverse Sturm-Liouville problem (SLP) of an arbitrary order with arbitrary boundary conditions. KW - Sturm-Liouville problems of higher order KW - singular Sturm-Liouville KW - problems KW - inverse Sturm-Liouville problems Y1 - 2020 U6 - https://doi.org/10.3390/math8112074 SN - 2227-7390 VL - 8 IS - 11 PB - MDPI CY - Basel ER - TY - JOUR A1 - Schenke, Maren A1 - Schjeide, Brit-Maren A1 - Püschel, Gerhard Paul A1 - Seeger, Bettina T1 - Analysis of motor neurons differentiated from human induced pluripotent stem cells for the use in cell-based Botulinum neurotoxin activity assays JF - Toxins N2 - Botulinum neurotoxins (BoNTs) are potent neurotoxins produced by bacteria, which inhibit neurotransmitter release, specifically in their physiological target known as motor neurons (MNs). For the potency assessment of BoNTs produced for treatment in traditional and aesthetic medicine, the mouse lethality assay is still used by the majority of manufacturers, which is ethically questionable in terms of the 3Rs principle. In this study, MNs were differentiated from human induced pluripotent stem cells based on three published protocols. The resulting cell populations were analyzed for their MN yield and their suitability for the potency assessment of BoNTs. MNs produce specific gangliosides and synaptic proteins, which are bound by BoNTs in order to be taken up by receptor-mediated endocytosis, which is followed by cleavage of specific soluble N-ethylmaleimide-sensitive-factor attachment receptor (SNARE) proteins required for neurotransmitter release. The presence of receptors and substrates for all BoNT serotypes was demonstrated in MNs generated in vitro. In particular, the MN differentiation protocol based on Du et al. yielded high numbers of MNs in a short amount of time with high expression of BoNT receptors and targets. The resulting cells are more sensitive to BoNT/A1 than the commonly used neuroblastoma cell line SiMa. MNs are, therefore, an ideal tool for being combined with already established detection methods. KW - Botulinum neurotoxin KW - motor neurons KW - cell-based in vitro assay KW - potency KW - assessment KW - induced pluripotent stem cells Y1 - 2020 U6 - https://doi.org/10.3390/toxins12050276 SN - 2072-6651 VL - 12 IS - 5 PB - MDPI CY - Basel ER - TY - JOUR A1 - Kellis, Eleftherios A1 - Ellinoudis, Athanasios A1 - Intziegianni, Konstantina A1 - Kofotolis, Nikolaos T1 - Muscle thickness during core stability exercises in children and adults JF - Journal of human kinetics N2 - Core stability exercises are regular part of exercise programs for asymptomatic individuals across ages. The purpose of this study was to examine deep abdominal and multifidus muscle thickness in children and adults and to determine reliability of the rehabilitative ultrasound (RUSI) imaging. Transversus abdominis and lumbar multifidus thickness at rest and during core stability exercise were examined in pre-pubertal children (N = 23), adolescents (N = 20), young adults (N = 21) and middle-aged adults (N = 22). Thirty-nine participants were re-tested one week after to establish reliability. Muscle thickness at rest was lower in children and adolescents compared with young and middle-aged adults (p < 0.008). Young adults displayed the highest relative transversus abdominis thickness upon contraction (p < 0.008). Lumbar multfidus contraction thickness was greater in young-adults than middle-aged adults and prepubertal children (p < 0.008), but it was similar between young-adults and adolescents (p > 0.008). Reliability was high for both muscles (ICC3,3 = 0.76 - 0.99). The age-related differences in muscle thickness indicate that core stability exercises may be beneficial for children and middle-aged adults. KW - childhood KW - musculoskeletal ultrasound KW - repeatability KW - core exercise KW - core stability Y1 - 2020 U6 - https://doi.org/10.2478/hukin-2019-0079 SN - 1640-5544 SN - 1899-7562 VL - 71 IS - 1 SP - 131 EP - 144 PB - Academy of Physical Education CY - Katowice ER - TY - JOUR A1 - Wieczorek, Mareike A1 - Herzschuh, Ulrike T1 - Compilation of relative pollen productivity (RPP) estimates and taxonomically harmonised RPP datasets for single continents and Northern Hemisphere extratropics JF - Earth system science data : ESSD N2 - Relative pollen productivity (RPP) estimates are fractionate values, often in relation to Poaceae, that allow vegetation cover to be estimated from pollen counts with the help of models. RPP estimates are especially used in the scientific community in Europe and China, with a few studies in North America. Here we present a comprehensive compilation of available northern hemispheric RPP studies and their results arising from 51 publications with 60 sites and 131 taxa. This compilation allows scientists to identify data gaps in need of further RPP analyses but can also aid them in finding an RPP set for their study region. We also present a taxonomically harmonised, unified RPP dataset for the Northern Hemisphere and subsets for North America (including Greenland), Europe (including arctic Russia), and China, which we generated from the available studies. The unified dataset gives the mean RPP for 55 harmonised taxa as well as fall speeds, which are necessary to reconstruct vegetation cover from pollen counts and RPP values. Data are openly available at https://doi.org/10.1594/PANGAEA.922661 (Wieczorek and Herzschuh, 2020). Y1 - 2020 U6 - https://doi.org/10.5194/essd-12-3515-2020 SN - 1866-3508 SN - 1866-3516 VL - 12 IS - 4 SP - 3515 EP - 3528 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Trounson, Karl M. A1 - Busch, Aglaja A1 - Collier, Neil French A1 - Robertson, Samuel T1 - Effects of acute wearable resistance loading on overground running lower body kinematics JF - PLoS one N2 - Field-based sports require athletes to run sub-maximally over significant distances, often while contending with dynamic perturbations to preferred coordination patterns. The ability to adapt movement to maintain performance under such perturbations appears to be trainable through exposure to task variability, which encourages movement variability. The aim of the present study was to investigate the extent to which various wearable resistance loading magnitudes alter coordination and induce movement variability during running. To investigate this, 14 participants (three female and 11 male) performed 10 sub-maximal velocity shuttle runs with either no weight, 1%, 3%, or 5% of body weight attached to the lower limbs. Sagittal plane lower limb joint kinematics from one complete stride cycle in each run were assessed using functional data analysis techniques, both across the participant group and within-individuals. At the group-level, decreases in ankle plantarflexion following toe-off were evident in the 3% and 5% conditions, while increased knee flexion occurred during weight acceptance in the 5% condition compared with unloaded running. At the individual-level, between-run joint angle profiles varied, with six participants exhibiting increased joint angle variability in one or more loading conditions compared with unloaded running. Loading of 5% decreased between-run ankle joint variability among two individuals, likely in accordance with the need to manage increased system load or the novelty of the task. In terms of joint coordination, the most considerable alterations to coordination occurred in the 5% loading condition at the hip-knee joint pair, however, only a minority of participants exhibited this tendency. Coaches should prescribe wearable resistance individually to perturb preferred coordination patterns and encourage movement variability without loading to the extent that movement options become limited. KW - movement patterns KW - external perturbations KW - australian football KW - performance KW - variability KW - coordination KW - freedom KW - leg KW - identification KW - adaptations Y1 - 2020 U6 - https://doi.org/10.1371/journal.pone.0244361 SN - 1932-6203 VL - 15 IS - 12 PB - PLoS CY - San Francisco, California, US ER - TY - JOUR A1 - Natho, Stephanie A1 - Tschikof, Martin A1 - Bondar-Kunze, Elisabeth A1 - Hein, Thomas T1 - Modeling the effect of enhanced lateral connectivity on nutrient retention capacity in large river floodplains BT - how much connected floodplain do we need? JF - Frontiers in Environmental Science N2 - Floodplains have been degraded in Central Europe for centuries, resulting in less dynamic and less diverse ecosystems than in the past. They provide essential ecosystem services like nutrient retention to improve overall water quality and thus fulfill naturally what EU legislation demands, but this service is impaired by reduced connectivity patterns. Along the second-longest river in Europe, the Danube, restoration measures have been carried out and are planned for the near future in the Austrian Danube Floodplain National Park in accordance with navigation purposes. We investigated nutrient retention capacity in seven currently differently connected side arms and the effects of proposed restoration measures using two complementary modeling approaches. We modeled nutrient retention capacity in two scenarios considering different hydrological conditions, as well as the consequences of planned restoration measures for side arm connectivity. With existing monitoring data on hydrology, nitrate, and total phosphorus concentrations for three side arms, we applied a statistical model and compared these results to a semi-empirical retention model. The latter was originally developed for larger scales, based on transferable causalities of retention processes and set up for this floodplain with publicly available data. Both model outcomes are in a comparable range for NO3-N (77-198 kg ha(-1)yr(-1)) and TP (1.4-5.7 kg ha(-1)yr(-1)) retention and agree in calculating higher retention in floodplains, where reconnection allows more frequent inundation events. However, the differences in the model results are significant for specific aspects especially during high flows, where the semi-empirical model complements the statistical model. On the other hand, the statistical model complements the semi-empirical model when taking into account nutrient retention at times of no connection between the remaining water bodies left in the floodplain. Overall, both models show clearly that nutrient retention in the Danube floodplains can be enhanced by restoring lateral hydrological reconnection and, for all planned measures, a positive effect on the overall water quality of the Danube River is expected. Still, a frequently hydrologically connected stretch of national park is insufficient to improve the water quality of the whole Upper Danube, and more functional floodplains are required. KW - floodplain KW - lateral hydrological connectivity KW - Danube KW - restoration KW - reconnection KW - inundation KW - nutrient retention KW - modeling Y1 - 2020 U6 - https://doi.org/10.3389/fenvs.2020.00074 SN - 2296-665X VL - 8 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Matthias, Katja A1 - Rissling, Olesja A1 - Pieper, Dawid Aleksander A1 - Morche, Johannes A1 - Nocon, Marc A1 - Jacobs, Anja A1 - Wegewitz, Uta Elke A1 - Schirm, Jaqueline A1 - Lorenz, Robert C. T1 - The methodological quality of systematic reviews on the treatment of adult major depression needs improvement according to AMSTAR 2 BT - a cross-sectional study JF - Heliyon N2 - Background: Several standards have been developed to assess methodological quality of systematic reviews (SR). One widely used tool is the AMSTAR. A recent update -AMSTAR 2 -is a 16 item evaluation tool that enables a detailed assessment of SR that include randomised (RCT) or non-randomised studies (NRS) of healthcare interventions. Methods: A cross-sectional study of SR on pharmacological or psychological interventions in major depression in adults was conducted. SR published during 2012-2017 were sampled from MEDLINE, EMBASE and the Cochrane Database of SR. Methodological quality was assessed using AMSTAR 2. Potential predictive factors associated with quality were examined. Results: In rating overall confidence in the results of 60 SR four reviews were rated "high", two were "moderate", one was "low" and 53 were "critically low". The mean AMSTAR 2 percentage score was 45.3% (standard deviation 22.6%) in a wide range from 7.1% to 93.8%. Predictors of higher quality were: type of review (higher quality in Cochrane Reviews), SR including only randomized trials and higher journal impact factor. Limitations: AMSTAR 2 is not intended to be used for the generation of a percentage score. Conclusions: According to AMSTAR 2 the overall methodological quality of SR on the treatment of adult major depression needs improvement. Although there is a high need for summarized information in the field of mental health, this work demonstrates the need to critically assess SR before using their findings. Better adherence to established reporting guidelines for SR is needed. KW - public health KW - epidemiology KW - psychiatry KW - depression KW - evidence-based KW - medicine KW - AMSTAR 2 KW - methodological quality KW - risk of bias KW - systematic KW - review KW - major depression Y1 - 2020 U6 - https://doi.org/10.1016/j.heliyon.2020.e04776 SN - 2405-8440 VL - 6 IS - 9 PB - Elsevier CY - London [u.a.] ER - TY - JOUR A1 - Ette, Ottmar T1 - Mi primera lectura académica T1 - My first academic lecture BT - Mimesis, de Erich Auerbach BT - Mimesis by Erich Auerbach JF - Álabe : Revista de Investigación sobre Lectura y Escritura Y1 - 2020 U6 - https://doi.org/10.15645/Alabe2020.22.13 SN - 2171-9624 IS - 22 PB - Universidad de Almería CY - Almería ER - TY - JOUR A1 - Wetzel, Maria A1 - Kempka, Thomas A1 - Kühn, Michael T1 - Hydraulic and mechanical impacts of pore space alterations within a sandstone quantified by a flow velocity-dependent precipitation approach JF - Materials N2 - Geochemical processes change the microstructure of rocks and thereby affect their physical behaviour at the macro scale. A micro-computer tomography (micro-CT) scan of a typical reservoir sandstone is used to numerically examine the impact of three spatial alteration patterns on pore morphology, permeability and elastic moduli by correlating precipitation with the local flow velocity magnitude. The results demonstrate that the location of mineral growth strongly affects the permeability decrease with variations by up to four orders in magnitude. Precipitation in regions of high flow velocities is characterised by a predominant clogging of pore throats and a drastic permeability reduction, which can be roughly described by the power law relation with an exponent of 20. A continuous alteration of the pore structure by uniform mineral growth reduces the permeability comparable to the power law with an exponent of four or the Kozeny-Carman relation. Preferential precipitation in regions of low flow velocities predominantly affects smaller throats and pores with a minor impact on the flow regime, where the permeability decrease is considerably below that calculated by the power law with an exponent of two. Despite their complete distinctive impact on hydraulics, the spatial precipitation patterns only slightly affect the increase in elastic rock properties with differences by up to 6.3% between the investigated scenarios. Hence, an adequate characterisation of the spatial precipitation pattern is crucial to quantify changes in hydraulic rock properties, whereas the present study shows that its impact on elastic rock parameters is limited. The calculated relations between porosity and permeability, as well as elastic moduli can be applied for upscaling micro-scale findings to reservoir-scale models to improve their predictive capabilities, what is of paramount importance for a sustainable utilisation of the geological subsurface. KW - Bentheim sandstone KW - digital rock physics KW - micro-CT KW - elastic properties KW - permeability KW - precipitation Y1 - 2020 U6 - https://doi.org/10.3390/ma13143100 SN - 1996-1944 VL - 13 IS - 14 PB - MDPI CY - Basel ER - TY - JOUR A1 - Marzetz, Vanessa A1 - Spijkerman, Elly A1 - Striebel, Maren A1 - Wacker, Alexander T1 - Phytoplankton community responses to interactions between light intensity, light variations, and phosphorus supply JF - Frontiers in Environmental Science N2 - In a changing world, phytoplankton communities face a large variety of challenges including altered light regimes. These alterations are caused by more pronounced stratification due to rising temperatures, enhanced eutrophication, and browning of lakes. Community responses toward these effects can emerge as alterations in physiology, biomass, biochemical composition, or diversity. In this study, we addressed the combined effects of changes in light and nutrient conditions on community responses. In particular, we investigated how light intensity and variability under two nutrient conditions influence (1) fast responses such as adjustments in photosynthesis, (2) intermediate responses such as pigment adaptation and (3) slow responses such as changes in community biomass and species composition. Therefore, we exposed communities consisting of five phytoplankton species belonging to different taxonomic groups to two constant and two variable light intensity treatments combined with two levels of phosphorus supply. The tested phytoplankton communities exhibited increased fast reactions of photosynthetic processes to light variability and light intensity. The adjustment of their light harvesting mechanisms via community pigment composition was not affected by light intensity, variability, or nutrient supply. However, pigment specific effects of light intensity, light variability, and nutrient supply on the proportion of the respective pigments were detected. Biomass was positively affected by higher light intensity and nutrient concentrations while the direction of the effect of variability was modulated by light intensity. Light variability had a negative impact on biomass at low, but a positive impact at high light intensity. The effects on community composition were species specific. Generally, the proportion of green algae was higher under high light intensity, whereas the cyanobacterium performed better under low light conditions. In addition to that, the diatom and the cryptophyte performed better with high nutrient supply while the green algae as well as the cyanobacterium performed better at low nutrient conditions. This shows that light intensity, light variability, and nutrient supply interactively affect communities. Furthermore, the responses are highly species and pigment specific, thus to clarify the effects of climate change a deeper understanding of the effects of light variability and species interactions within communities is important. KW - phytoplankton communities KW - light variability KW - photosynthetic rate KW - climate change KW - resource competition KW - light intensity (irradiance) KW - pigment composition KW - nutrient supply Y1 - 2020 U6 - https://doi.org/10.3389/fenvs.2020.539733 SN - 2296-665X VL - 8 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Cheng, Chaojie A1 - Milsch, Harald T1 - Evolution of fracture aperture in quartz sandstone under hydrothermal conditions BT - mechanical and chemical effects JF - Minerals N2 - Fractures efficiently affect fluid flow in geological formations, and thereby determine mass and energy transport in reservoirs, which are not least exploited for economic resources. In this context, their response to mechanical and thermal changes, as well as fluid-rock interactions, is of paramount importance. In this study, a two-stage flow-through experiment was conducted on a pure quartz sandstone core of low matrix permeability, containing one single macroscopic tensile fracture. In the first short-term stage, the effects of mechanical and hydraulic aperture on pressure and temperature cycles were investigated. The purpose of the subsequent intermittent-flow long-term (140 days) stage was to constrain the evolution of the geometrical and hydraulic fracture properties resulting from pressure solution. Deionized water was used as the pore fluid, and permeability, as well as the effluent Si concentrations, were systematically measured. Overall, hydraulic aperture was shown to be significantly less affected by pressure, temperature and time, in comparison to mechanical aperture. During the long-term part of the experiment at 140 degrees C, the effluent Si concentrations likely reached a chemical equilibrium state within less than 8 days of stagnant flow, and exceeded the corresponding hydrostatic quartz solubility at this temperature. This implies that the pressure solution was active at the contacting fracture asperities, both at 140 degrees C and after cooling to 33 degrees C. The higher temperature yielded a higher dissolution rate and, consequently, a faster attainment of chemical equilibrium within the contact fluid. X-ray mu CT observations evidenced a noticeable increase in fracture contact area ratio, which, in combination with theoretical considerations, implies a significant decrease in mechanical aperture. In contrast, the sample permeability, and thus the hydraulic fracture aperture, virtually did not vary. In conclusion, pressure solution-induced fracture aperture changes are affected by the degree of time-dependent variations in pore fluid composition. In contrast to the present case of a quasi-closed system with mostly stagnant flow, in an open system with continuous once-through fluid flow, the activity of the pressure solution may be amplified due to the persistent fluid-chemical nonequilibrium state, thus possibly enhancing aperture and fracture permeability changes. KW - flow-through experiment KW - fracture aperture KW - pressure solution KW - mass KW - transfer KW - silica concentration KW - permeability KW - quartz sandstone Y1 - 2020 U6 - https://doi.org/10.3390/min10080657 SN - 2075-163X VL - 10 IS - 8 PB - MDPI CY - Basel ER - TY - JOUR A1 - Gehre, Christian A1 - Flechner, Marie A1 - Kammerer, Sarah A1 - Küpper, Jan-Heiner A1 - Coleman, Charles Dominic A1 - Püschel, Gerhard Paul A1 - Uhlig, Katja A1 - Duschl, Claus T1 - Real time monitoring of oxygen uptake of hepatocytes in a microreactor using optical microsensors JF - Scientific reports N2 - Most in vitro test systems for the assessment of toxicity are based on endpoint measurements and cannot contribute much to the establishment of mechanistic models, which are crucially important for further progress in this field. Hence, in recent years, much effort has been put into the development of methods that generate kinetic data. Real time measurements of the metabolic activity of cells based on the use of oxygen sensitive microsensor beads have been shown to provide access to the mode of action of compounds in hepatocytes. However, for fully exploiting this approach a detailed knowledge of the microenvironment of the cells is required. In this work, we investigate the cellular behaviour of three types of hepatocytes, HepG2 cells, HepG2-3A4 cells and primary mouse hepatocytes, towards their exposure to acetaminophen when the availability of oxygen for the cell is systematically varied. We show that the relative emergence of two modes of action, one NAPQI dependent and the other one transient and NAPQI independent, scale with expression level of CYP3A4. The transient cellular response associated to mitochondrial respiration is used to characterise the influence of the initial oxygen concentration in the wells before exposure to acetaminophen on the cell behaviour. A simple model is presented to describe the behaviour of the cells in this scenario. It demonstrates the level of control over the role of oxygen supply in these experiments. This is crucial for establishing this approach into a reliable and powerful method for the assessment of toxicity. Y1 - 2020 U6 - https://doi.org/10.1038/s41598-020-70785-6 SN - 2045-2322 VL - 10 IS - 1 PB - Macmillan Publishers Limited, part of Springer Nature CY - [London] ER - TY - JOUR A1 - Stojkoski, Viktor A1 - Sandev, Trifce A1 - Basnarkov, Lasko A1 - Kocarev, Ljupco A1 - Metzler, Ralf T1 - Generalised geometric Brownian motion BT - theory and applications to option pricing JF - Entropy N2 - Classical option pricing schemes assume that the value of a financial asset follows a geometric Brownian motion (GBM). However, a growing body of studies suggest that a simple GBM trajectory is not an adequate representation for asset dynamics, due to irregularities found when comparing its properties with empirical distributions. As a solution, we investigate a generalisation of GBM where the introduction of a memory kernel critically determines the behaviour of the stochastic process. We find the general expressions for the moments, log-moments, and the expectation of the periodic log returns, and then obtain the corresponding probability density functions using the subordination approach. Particularly, we consider subdiffusive GBM (sGBM), tempered sGBM, a mix of GBM and sGBM, and a mix of sGBMs. We utilise the resulting generalised GBM (gGBM) in order to examine the empirical performance of a selected group of kernels in the pricing of European call options. Our results indicate that the performance of a kernel ultimately depends on the maturity of the option and its moneyness. KW - geometric Brownian motion KW - Fokker– Planck equation KW - Black– Scholes model KW - option pricing Y1 - 2020 U6 - https://doi.org/10.3390/e22121432 SN - 1099-4300 VL - 22 IS - 12 PB - MDPI CY - Basel ER - TY - JOUR A1 - Herzog, Stefan M. A1 - Jenny, Mirjam A. A1 - Nickel, Christian A1 - Ortega, Ricardo Nieves A1 - Bingisser, Roland T1 - Emergency department patients with weakness or fatigue BT - can physicians predict their outcomes at the front door? A prospective observational study JF - PLOS ONE N2 - Background Generalized weakness and fatigue are underexplored symptoms in emergency medicine. Triage tools often underestimate patients presenting to the emergency department (ED) with these nonspecific symptoms (Nemec et al., 2010). At the same time, physicians' disease severity rating (DSR) on a scale from 0 (not sick at all) to 10 (extremely sick) predicts key outcomes in ED patients (Beglinger et al., 2015; Rohacek et al., 2015). Our goals were (1) to characterize ED patients with weakness and/or fatigue (W|F); to explore (2) to what extent physicians' DSR at triage can predict five key outcomes in ED patients with W|F; (3) how well DSR performs relative to two commonly used benchmark methods, the Emergency Severity Index (ESI) and the Charlson Comorbidity Index (CCI); (4) to what extent DSR provides predictive information beyond ESI, CCI, or their linear combination, i.e., whether ESI and CCI should be used alone or in combination with DSR; and (5) to what extent ESI, CCI, or their linear combination provide predictive information beyond DSR alone, i.e., whether DSR should be used alone or in combination with ESI and / or CCI. Methods Prospective observational study between 2013-2015 (analysis in 2018-2020, study team blinded to hypothesis) conducted at a single center. We study an all-comer cohort of 3,960 patients (48% female patients, median age = 51 years, 94% completed 1-year follow-up). We looked at two primary outcomes (acute morbidity (Bingisser et al., 2017; Weigel et al., 2017) and all-cause 1- year mortality) and three secondary outcomes (in-hospital mortality, hospitalization and transfer to ICU). We assessed the predictive power (i.e., resolution, measured as the Area under the ROC Curve, AUC) of the scores and, using logistic regression, their linear combinations. Findings Compared to patients without W|F (n = 3,227), patients with W|F (n = 733) showed higher prevalences for all five outcomes, reported more symptoms across both genders, and received higher DSRs (median = 4; interquartile range (IQR) = 3-6 vs. median = 3; IQR = 2-5). DSR predicted all five outcomes well above chance (i.e., AUCs > similar to 0.70), similarly well for both patients with and without W|F, and as good as or better than ESI and CCI in patients with and without W|F (except for 1-year mortality where CCI performs better). For acute morbidity, hospitalization, and transfer to ICU there is clear evidence that adding DSR to ESI and/or CCI improves predictions for both patient groups; for 1-year mortality and in-hospital mortality this holds for most, but not all comparisons. Adding ESI and/or CCI to DSR generally did not improve performance or even decreased it. Conclusions The use of physicians' disease severity rating has never been investigated in patients with generalized weakness and fatigue. We show that physicians' prediction of acute morbidity, mortality, hospitalization, and transfer to ICU through their DSR is also accurate in these patients. Across all patients, DSR is less predictive of acute morbidity for female than male patients, however. Future research should investigate how emergency physicians judge their patients' clinical state at triage and how this can be improved and used in simple decision aids. Y1 - 2020 U6 - https://doi.org/10.1371/journal.pone.0239902 SN - 1932-6203 VL - 15 IS - 11 PB - Public Library of Science CY - San Francisco, California, US ER - TY - JOUR A1 - Wagner, Birgit A1 - Hofmann, Laura A1 - Maaß, Ulrike T1 - Online-group intervention after suicide bereavement through the use of webinars BT - study protocol for a randomized controlled trial JF - Trials N2 - Introduction: The death of a significant person through suicide is a very difficult experience and can have long-term impact on an individual's psychosocial and physical functioning. However, there are only few studies that have examined the effects of interventions in suicide survivors. In the present study, we examine an online-group intervention for people bereaved by suicide using a group-webinar. Methods: The intervention was developed based on focus groups with the target group. The cognitive-behavioral 12-module webinar-based group intervention focuses on suicide bereavement-related themes such as feelings of guilt, stigmatization, meaning reconstruction and the relationship to the deceased. Further, the webinar includes testimonial videos and psychoeducation. The suicide survivors are randomized to the intervention or the waiting list in a group-cluster randomized controlled trial. Primary outcomes are suicidality (Beck Scale for Suicide Ideation) and depression (Beck Depression Inventory-II) and secondary outcomes are symptoms of prolonged grief disorder (Inventory of Complicated Grief-German Version ), posttraumatic stress disorder ( Revised Impact of Event Scale ), stigmatization (Stigma of Suicide and Suicide Survivor ) and posttraumatic cognitions (Posttraumatic Cognitions Inventory). Discussion: Previous studies of Internet-based interventions for the bereaved were based on writing interventions showing large treatment effects. Little is known about the use of webinars as group interventions. Advantages and challenges of this novel approach of psychological interventions will be discussed. KW - Suicide bereavement KW - grief KW - group intervention KW - webinar KW - suicidality KW - prolonged grief disorder KW - randomized controlled trial Y1 - 2020 U6 - https://doi.org/10.1186/s13063-019-3891-5 SN - 1468-6694 SN - 1745-6215 VL - 21 IS - 1 PB - BioMed Central CY - London ER - TY - JOUR A1 - Schneeberger, Karin A1 - Röder, Gregory A1 - Taborsky, Michael T1 - The smell of hunger BT - Norway rats provision social partners based on odour cues of need JF - PLoS biology N2 - When individuals exchange helpful acts reciprocally, increasing the benefit of the receiver can enhance its propensity to return a favour, as pay-offs are typically correlated in iterated interactions. Therefore, reciprocally cooperating animals should consider the relative benefit for the receiver when deciding to help a conspecific. Norway rats (Rattus norvegicus) exchange food reciprocally and thereby take into account both the cost of helping and the potential benefit to the receiver. By using a variant of the sequential iterated prisoner's dilemma paradigm, we show that rats may determine the need of another individual by olfactory cues alone. In an experimental food-exchange task, test subjects were provided with odour cues from hungry or satiated conspecifics located in a different room. Our results show that wild-type Norway rats provide help to a stooge quicker when they receive odour cues from a hungry rather than from a satiated conspecific. Using chemical analysis by gas chromatography-mass spectrometry (GC-MS), we identify seven volatile organic compounds that differ in their abundance between hungry and satiated rats. Combined, this "smell of hunger" can apparently serve as a reliable cue of need in reciprocal cooperation, which supports the hypothesis of honest signalling. Y1 - 2020 U6 - https://doi.org/10.1371/journal.pbio.3000628 SN - 1544-9173 SN - 1545-7885 VL - 18 IS - 3 PB - PLoS CY - San Fransisco ER - TY - JOUR A1 - Deutschmann, Claudia A1 - Roggenbuck, Dirk A1 - Schierack, Peter A1 - Rödiger, Stefan T1 - Autoantibody testing by enzyme-linked immunosorbent assay-a case in which the solid phase decides on success and failure JF - Heliyon N2 - Background: The enzyme-linked immunosorbent assay (ELISA) is an indispensable tool for clinical diagnostics to identify or differentiate diseases such as autoimmune illnesses, but also to monitor their progression or control the efficacy of drugs. One use case of ELISA is to differentiate between different states (e.g. healthy vs. diseased). Another goal is to quantitatively assess the biomarker in question, like autoantibodies. Thus, the ELISA technology is used for the discovery and verification of new autoantibodies, too. Of key interest, however, is the development of immunoassays for the sensitive and specific detection of such biomarkers at early disease stages. Therefore, users have to deal with many parameters, such as buffer systems or antigen-autoantibody interactions, to successfully establish an ELISA. Often, fine-tuning like testing of several blocking substances is performed to yield high signal-to-noise ratios.
Methods: We developed an ELISA to detect IgA and IgG autoantibodies against chitinase-3-like protein 1 (CHI3L1), a newly identified autoantigen in inflammatory bowel disease (IBD), in the serum of control and disease groups (n = 23, respectively). Microwell plates with different surface modifications (PolySorp and MaxiSorp coating) were tested to detect reproducibility problems.
Results: We found a significant impact of the surface properties of the microwell plates. IgA antibody reactivity was significantly lower, since it was in the range of background noise, when measured on MaxiSorp coated plates (p < 0.0001). The IgG antibody reactivity did not differ on the diverse plates, but the plate surface had a significant influence on the test result (p = 0.0005).
Conclusion: With this report, we want to draw readers' attention to the properties of solid phases and their effects on the detection of autoantibodies by ELISA. We want to sensitize the reader to the fact that the choice of the wrong plate can lead to a false negative test result, which in turn has serious consequences for the discovery of autoantibodies. KW - biochemistry KW - coatings KW - surface chemistry KW - immunology KW - proteins KW - laboratory medicine KW - clinical research KW - enzyme-linked immunosorbent KW - assay KW - biomarker discovery KW - reproducibility KW - solid-phase KW - autoantibody Y1 - 2020 U6 - https://doi.org/10.1016/j.heliyon.2020.e03270 SN - 2405-8440 VL - 6 IS - 1 PB - Elsevier CY - London [u.a.] ER - TY - JOUR A1 - Baes, Marzieh A1 - Sobolev, Stephan A1 - Gerya, Taras V. A1 - Brune, Sascha T1 - Plume-induced subduction initiation BT - single-slab or multi-slab subduction? JF - Geochemistry, geophysics, geosystems N2 - Initiation of subduction following the impingement of a hot buoyant mantle plume is one of the few scenarios that allow breaking the lithosphere and recycling a stagnant lid without requiring any preexisting weak zones. Here, we investigate factors controlling the number and shape of retreating subducting slabs formed by plume-lithosphere interaction. Using 3-D thermomechanical models we show that the deformation regime, which defines formation of single-slab or multi-slab subduction, depends on several parameters such as age of oceanic lithosphere, thickness of the crust and large-scale lithospheric extension rate. Our model results indicate that on present-day Earth multi-slab plume-induced subduction is initiated only if the oceanic lithosphere is relatively young (<30-40 Myr, but >10 Myr), and the crust has a typical thickness of 8 km. In turn, development of single-slab subduction is facilitated by older lithosphere and pre-imposed extensional stresses. In early Earth, plume-lithosphere interaction could have led to formation of either episodic short-lived circular subduction when the oceanic lithosphere was young or to multi-slab subduction when the lithosphere was old. KW - subduction zone KW - plume KW - numerical model KW - singleslab KW - multi-slab Y1 - 2020 U6 - https://doi.org/10.1029/2019GC008663 SN - 1525-2027 VL - 21 IS - 2 PB - American Geophysical Union CY - Washington ER - TY - JOUR A1 - Baes, Marzieh A1 - Sobolev, Stephan V. A1 - Gerya, Taras V. A1 - Brune, Sascha T1 - Subduction initiation by Plume-Plateau interaction BT - insights from numerical models JF - Geochemistry, geophysics, geosystems N2 - It has recently been demonstrated that the interaction of a mantle plume with sufficiently old oceanic lithosphere can initiate subduction. However, the existence of large lithospheric heterogeneities, such as a buoyant plateau, in proximity to a rising plume head may potentially hinder the formation of a new subduction zone. Here, we investigate this scenario by means of 3-D numerical thermomechanical modeling. We explore how plume-lithosphere interaction is affected by lithospheric age, relative location of plume head and plateau border, and the strength of the oceanic crust. Our numerical experiments suggest four different geodynamic regimes: (a) oceanic trench formation, (b) circular oceanic-plateau trench formation, (c) plateau trench formation, and (d) no trench formation. We show that regardless of the age and crustal strength of the oceanic lithosphere, subduction can initiate when the plume head is either below the plateau border or at a distance less than the plume radius from the plateau edge. Crustal heterogeneity facilitates subduction initiation of old oceanic lithosphere. High crustal strength hampers the formation of a new subduction zone when the plume head is located below a young lithosphere containing a thick and strong plateau. We suggest that plume-plateau interaction in the western margin of the Caribbean could have resulted in subduction initiation when the plume head impinged onto the oceanic lithosphere close to the border between plateau and oceanic crust. KW - subduction zone KW - plume KW - plateau KW - numerical modeling KW - plume-induced KW - subduction initiation (PISI) Y1 - 2020 U6 - https://doi.org/10.1029/2020GC009119 SN - 1525-2027 VL - 21 IS - 8 PB - American Geophysical Union CY - Washington ER - TY - JOUR A1 - Eberhard, Julius A1 - Schaik, N. Loes M. B. A1 - Schibalski, Anett A1 - Gräff, Thomas T1 - Simulating future salinity dynamics in a coastal marshland under different climate scenarios JF - Vadose zone journal N2 - Salinization is a well-known problem in agricultural areas worldwide. In the last 20-30 yr, rising salinity in the upper, unconfined aquifer has been observed in the Freepsumer Meer, a grassland near the German North Sea coast. For investigating long-term development of salinity and water balance during 1961-2099, the one-dimensional Soil-Water-Atmosphere-Plant (SWAP) model was set up and calibrated for a soil column in the area. The model setup involves a deep aquifer as the source of salt through upward seepage. In the vertical salt transport equation, dispersion and advection are included. Six different regional outputs of statistical downscaling methods were used as climate scenarios. These comprise different rates of increasing surface temperature and different trends in seasonal rainfall. The simulation results exhibit opposing salinity trends for topsoil and deeper layers. Although projections of some scenarios entail decreasing salinities near the surface, most of them project a rise in subsoil salinity, with the strongest trends of up to +0.9 mg cm(-3) 100 yr(-1) at -65 cm. The results suggest that topsoil salinity trends in the study area are affected by the magnitude of winter rainfall trends, whereas high subsoil salinities correspond to low winter rainfall and high summer temperature. How these projected trends affect the vegetation and thereby future land use will depend on the future management of groundwater levels in the area. Y1 - 2020 U6 - https://doi.org/10.1002/vzj2.20008 SN - 1539-1663 VL - 19 IS - 1 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Linke, Christian A1 - Wösle, Markus A1 - Harder, Anja T1 - Anti-cancer agent 3-bromopyruvate reduces growth of MPNST and inhibits metabolic pathways in a representative in-vitro model JF - BMC cancer N2 - Background Anticancer compound 3-bromopyruvate (3-BrPA) suppresses cancer cell growth via targeting glycolytic and mitochondrial metabolism. The malignant peripheral nerve sheath tumor (MPNST), a very aggressive, therapy resistant, and Neurofibromatosis type 1 associated neoplasia, shows a high metabolic activity and affected patients may therefore benefit from 3-BrPA treatment. To elucidate the specific mode of action, we used a controlled cell model overexpressing proteasome activator (PA) 28, subsequently leading to p53 inactivation and oncogenic transformation and therefore reproducing an important pathway in MPNST and overall tumor pathogenesis. Methods Viability of MPNST cell lines S462, NSF1, and T265 in response to increasing doses (0-120 mu M) of 3-BrPA was analyzed by CellTiter-Blue (R) assay. Additionally, we investigated viability, reactive oxygen species (ROS) production (dihydroethidium assay), nicotinamide adenine dinucleotide dehydrogenase activity (NADH-TR assay) and lactate production (lactate assay) in mouse B8 fibroblasts overexpressing PA28 in response to 3-BrPA application. For all experiments normal and nutrient deficient conditions were tested. MPNST cell lines were furthermore characterized immunohistochemically for Ki67, p53, bcl2, bcl6, cyclin D1, and p21. Results MPNST significantly responded dose dependent to 3-BrPA application, whereby S462 cells were most responsive. Human control cells showed a reduced sensitivity. In PA28 overexpressing cancer cell model 3-BrPA application harmed mitochondrial NADH dehydrogenase activity mildly and significantly failed to inhibit lactate production. PA28 overexpression was associated with a functional glycolysis as well as a partial resistance to stress provoked by nutrient deprivation. 3-BrPA treatment was not associated with an increase of ROS. Starvation sensitized MPNST to treatment. Conclusions Aggressive MPNST cells are sensitive to 3-BrPA therapy in-vitro with and without starvation. In a PA28 overexpression cancer cell model leading to p53 inactivation, thereby reflecting a key molecular feature in human NF1 associated MPNST, known functions of 3-BrPA to block mitochondrial activity and glycolysis were reproduced, however oncogenic cells displayed a partial resistance. To conclude, 3-BrPA was sufficient to reduce NF1 associated MPNST viability potentially due inhibition of glycolysis which should lead to the initiation of further studies and promises a potential benefit for NF1 patients. KW - MPNST KW - NF1 KW - 3-BrPA KW - glycolysis KW - mitochondrial respiration KW - p53 KW - starvation KW - cell cycle KW - PA28 KW - B8 fibroblasts Y1 - 2020 U6 - https://doi.org/10.1186/s12885-020-07397-w SN - 1471-2407 VL - 20 IS - 1 PB - BioMed Central CY - London ER - TY - JOUR A1 - Borremans, An A1 - Bußler, Sara A1 - Sagu Tchewonpi, Sorel A1 - Rawel, Harshadrai Manilal A1 - Schlüter, Oliver K. A1 - Leen, Van Campenhout T1 - Effect of blanching plus fermentation on selected functional properties of mealworm (Tenebrio molitor) powders JF - Foods : open access journal N2 - The aim of this study was to determine the effect of blanching followed by fermentation of mealworms (Tenebrio molitor) with commercial meat starter cultures on the functional properties of powders produced from the larvae. Full fat and defatted powder samples were prepared from non-fermented and fermented mealworm pastes. Then the crude protein, crude fat, and dry matter contents, pH, bulk density, colour, water and oil binding capacity, foaming capacity and stability, emulsion capacity and stability, protein solubility, quantity of free amino groups, and protein composition of the powders were evaluated. Regardless of the starter culture used, the blanching plus fermentation process reduced the crude and soluble protein contents of the full fat powders and in general impaired their water and oil binding, foaming, and emulsifying properties. Defatting of the powders improved most functional properties studied. The o-phthaldialdehyde assay revealed that the amount of free amino groups was higher in the fermented powders while sodium dodecyl sulfate polyacrylamide gel electrophoresis demonstrated that the soluble proteins of the fermented powders were composed of molecules of lower molecular mass compared to non-fermented powders. As molecular sizes of the soluble proteins decreased, it was clear that the protein structure was also modified by the fermentation process, which in turn led to changes in functional properties. In general, it was concluded that fermentation of mealworms with blanching as a pre-treatment does not contribute to the functional properties studied in this work. Nevertheless, the results confirmed that the properties of non-fermented powders are comparable to other food protein sources. KW - mealworm KW - fermentation KW - functional properties KW - insect proteins KW - SDS-PAGE Y1 - 2020 U6 - https://doi.org/10.3390/foods9070917 SN - 2304-8158 VL - 9 IS - 7 PB - MDPI CY - Basel ER - TY - JOUR A1 - Wright, Stephanie L. A1 - Ulke, Jannis A1 - Font, Anna A1 - Chan, Ka Lung Andrew A1 - Kelly, Frank J. T1 - Atmospheric microplastic deposition in an urban environment and an evaluation of transport JF - Environment international N2 - Microplastics are a global environmental issue contaminating aquatic and terrestrial environments. They have been reported in atmospheric deposition, and indoor and outdoor air, raising concern for public health due to the potential for exposure. Moreover, the atmosphere presents a new vehicle for microplastics to enter the wider environment, yet our knowledge of the quantities, characteristics and pathways of airborne microplastics is sparse. Here we show microplastics in atmospheric deposition in a major population centre, central London. Microplastics were found in all samples, with deposition rates ranging from 575 to 1008 microplastics/m(2)/d. They were found in various shapes, of which fibrous microplastics accounted for the great majority (92%). Across all samples, 15 different petrochemical-based polymers were identified. Bivariate polar plots indicated dependency on wind, with different source areas for fibrous and non-fibrous airborne microplastics. This is the first evidence of airborne microplastics in London and confirms the need to include airborne pathways when consolidating microplastic impacts on the wider environment and human health. KW - microplastics KW - atmospheric deposition KW - air pollution KW - urban Y1 - 2020 U6 - https://doi.org/10.1016/j.envint.2019.105411 SN - 0160-4120 SN - 1873-6750 VL - 136 PB - Elsevier, Pergamon Press CY - New York, NY [u.a.] ER - TY - GEN A1 - des Aulnois, Maxime Georges A1 - Réveillon, Damien A1 - Robert, Elise A1 - Caruana, Amandine A1 - Briand, Enora A1 - Guljamow, Arthur A1 - Dittmann, Elke A1 - Amzil, Zouher A1 - Bormans, Myriam T1 - Salt shock responses of Microcystis revealed through physiological, transcript, and metabolomic analyses T2 - Postprints der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe N2 - The transfer of Microcystis aeruginosa from freshwater to estuaries has been described worldwide and salinity is reported as the main factor controlling the expansion of M. aeruginosa to coastal environments. Analyzing the expression levels of targeted genes and employing both targeted and non-targeted metabolomic approaches, this study investigated the effect of a sudden salt increase on the physiological and metabolic responses of two toxic M. aeruginosa strains separately isolated from fresh and brackish waters, respectively, PCC 7820 and 7806. Supported by differences in gene expressions and metabolic profiles, salt tolerance was found to be strain specific. An increase in salinity decreased the growth of M. aeruginosa with a lesser impact on the brackish strain. The production of intracellular microcystin variants in response to salt stress correlated well to the growth rate for both strains. Furthermore, the release of microcystins into the surrounding medium only occurred at the highest salinity treatment when cell lysis occurred. This study suggests that the physiological responses of M. aeruginosa involve the accumulation of common metabolites but that the intraspecific salt tolerance is based on the accumulation of specific metabolites. While one of these was determined to be sucrose, many others remain to be identified. Taken together, these results provide evidence that M. aeruginosa is relatively salt tolerant in the mesohaline zone and microcystin (MC) release only occurs when the capacity of the cells to deal with salt increase is exceeded. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 1130 KW - Microcystis aeruginosa KW - microcystin KW - salt stress KW - metabolomic KW - transcript Y1 - 2020 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-472405 SN - 1866-8372 IS - 1130 ER - TY - JOUR A1 - Galka, Andreas A1 - Moontaha, Sidratul A1 - Siniatchkin, Michael T1 - Constrained expectation maximisation algorithm for estimating ARMA models in state space representation JF - EURASIP journal on advances in signal processing N2 - This paper discusses the fitting of linear state space models to given multivariate time series in the presence of constraints imposed on the four main parameter matrices of these models. Constraints arise partly from the assumption that the models have a block-diagonal structure, with each block corresponding to an ARMA process, that allows the reconstruction of independent source components from linear mixtures, and partly from the need to keep models identifiable. The first stage of parameter fitting is performed by the expectation maximisation (EM) algorithm. Due to the identifiability constraint, a subset of the diagonal elements of the dynamical noise covariance matrix needs to be constrained to fixed values (usually unity). For this kind of constraints, so far, no closed-form update rules were available. We present new update rules for this situation, both for updating the dynamical noise covariance matrix directly and for updating a matrix square-root of this matrix. The practical applicability of the proposed algorithm is demonstrated by a low-dimensional simulation example. The behaviour of the EM algorithm, as observed in this example, illustrates the well-known fact that in practical applications, the EM algorithm should be combined with a different algorithm for numerical optimisation, such as a quasi-Newton algorithm. KW - Kalman filtering KW - state space modelling KW - expectation maximisation algorithm Y1 - 2020 U6 - https://doi.org/10.1186/s13634-020-00678-3 SN - 1687-6180 VL - 2020 IS - 1 PB - Springer CY - Heidelberg ER - TY - JOUR A1 - Scherler, Dirk A1 - Schwanghart, Wolfgang T1 - Drainage divide networks BT - Part 2: Response to perturbations JF - Earth surface dynamics N2 - Drainage divides are organized into tree-like networks that may record information about drainage divide mobility. However, views diverge about how to best assess divide mobility. Here, we apply a new approach of automatically extracting and ordering drainage divide networks from digital elevation models to results from landscape evolution model experiments. We compared landscapes perturbed by strike-slip faulting and spatiotemporal variations in erodibility to a reference model to assess which topographic metrics (hillslope relief, flow distance, and chi) are diagnostic of divide mobility. Results show that divide segments that are a minimum distance of similar to 5 km from river confluences strive to attain constant values of hillslope relief and flow distance to the nearest stream. Disruptions of such patterns can be related to mobile divides that are lower than stable divides, closer to streams, and often asymmetric in shape. In general, we observe that drainage divides high up in the network, i.e., at great distances from river confluences, are more susceptible to disruptions than divides closer to these confluences and are thus more likely to record disturbance for a longer time period. We found that across-divide differences in hillslope relief proved more useful for assessing divide migration than other tested metrics. However, even stable drainage divide networks exhibit across-divide differences in any of the studied topographic metrics. Finally, we propose a new metric to quantify the connectivity of divide junctions. KW - dynamics KW - landscape evolution KW - low-relief KW - patterns KW - river KW - scale KW - tectonics Y1 - 2020 U6 - https://doi.org/10.5194/esurf-8-261-2020 SN - 2196-6311 SN - 2196-632X VL - 8 IS - 2 SP - 261 EP - 274 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Apriyanto, Ardha A1 - Tambunan, Van Basten T1 - The complete mitochondrial genome of oil palm pollinating weevil, Elaeidobius kamerunicus Faust BT - (Coleoptera : Curculionidae) JF - Mitochondrial DNA: Part B N2 - Elaeidobius kamerunicusis the most important insect pollinator in oil palm plantations. In this study, the mitochondrial genome (mitogenome) ofE. kamerunicus(17.729 bp), a member of the Curculionidae family, will be reported. The mitogenome consisted of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs), and a putative control region (CR). Phylogenetic analysis based on 13 protein-coding genes (PCGs) using maximum Likelihood (ML) methods indicated thatE. kamerunicusbelongs to the Curculionidae family. This mitochondrial genome provides essential information for understanding genetic populations, phylogenetics, molecular evolution, and other biological applications in this species. KW - Mitogenome KW - oil palm KW - pollinator KW - phylogeny KW - weevil Y1 - 2020 U6 - https://doi.org/10.1080/23802359.2020.1823899 SN - 2380-2359 VL - 5 IS - 3 SP - 3450 EP - 3452 PB - Routledge, Taylor & Francis Group CY - Abingdon ER - TY - JOUR A1 - Barlow, Axel A1 - Hartmann, Stefanie A1 - Gonzalez, Javier A1 - Hofreiter, Michael A1 - Paijmans, Johanna L. A. T1 - Consensify BT - a method for generating pseudohaploid genome sequences from palaeogenomic datasets with reduced error rates JF - Genes / Molecular Diversity Preservation International N2 - A standard practise in palaeogenome analysis is the conversion of mapped short read data into pseudohaploid sequences, frequently by selecting a single high-quality nucleotide at random from the stack of mapped reads. This controls for biases due to differential sequencing coverage, but it does not control for differential rates and types of sequencing error, which are frequently large and variable in datasets obtained from ancient samples. These errors have the potential to distort phylogenetic and population clustering analyses, and to mislead tests of admixture using D statistics. We introduce Consensify, a method for generating pseudohaploid sequences, which controls for biases resulting from differential sequencing coverage while greatly reducing error rates. The error correction is derived directly from the data itself, without the requirement for additional genomic resources or simplifying assumptions such as contemporaneous sampling. For phylogenetic and population clustering analysis, we find that Consensify is less affected by artefacts than methods based on single read sampling. For D statistics, Consensify is more resistant to false positives and appears to be less affected by biases resulting from different laboratory protocols than other frequently used methods. Although Consensify is developed with palaeogenomic data in mind, it is applicable for any low to medium coverage short read datasets. We predict that Consensify will be a useful tool for future studies of palaeogenomes. KW - palaeogenomics KW - ancient DNA KW - sequencing error KW - error reduction KW - D statistics KW - bioinformatics Y1 - 2020 U6 - https://doi.org/10.3390/genes11010050 SN - 2073-4425 VL - 11 IS - 1 PB - MDPI CY - Basel ER - TY - JOUR A1 - Ropp, Guillaume A1 - Lesur, Vincent A1 - Bärenzung, Julien A1 - Holschneider, Matthias T1 - Sequential modelling of the Earth’s core magnetic field JF - Earth, Planets and Space N2 - We describe a new, original approach to the modelling of the Earth's magnetic field. The overall objective of this study is to reliably render fast variations of the core field and its secular variation. This method combines a sequential modelling approach, a Kalman filter, and a correlation-based modelling step. Sources that most significantly contribute to the field measured at the surface of the Earth are modelled. Their separation is based on strong prior information on their spatial and temporal behaviours. We obtain a time series of model distributions which display behaviours similar to those of recent models based on more classic approaches, particularly at large temporal and spatial scales. Interesting new features and periodicities are visible in our models at smaller time and spatial scales. An important aspect of our method is to yield reliable error bars for all model parameters. These errors, however, are only as reliable as the description of the different sources and the prior information used are realistic. Finally, we used a slightly different version of our method to produce candidate models for the thirteenth edition of the International Geomagnetic Reference Field. KW - geomagnetic field KW - secular variation KW - Kalman filter KW - IGRF Y1 - 2020 U6 - https://doi.org/10.1186/s40623-020-01230-1 SN - 1880-5981 VL - 72 IS - 1 PB - Springer CY - New York ER - TY - JOUR A1 - Felisatti, Arianna A1 - Aagten-Murphy, David A1 - Laubrock, Jochen A1 - Shaki, Samuel A1 - Fischer, Martin H. T1 - The brain’s asymmetric frequency tuning BT - asymmetric behavior originates from asymmetric perception JF - Symmetry / Molecular Diversity Preservation International (MDPI) N2 - To construct a coherent multi-modal percept, vertebrate brains extract low-level features (such as spatial and temporal frequencies) from incoming sensory signals. However, because frequency processing is lateralized with the right hemisphere favouring low frequencies while the left favours higher frequencies, this introduces asymmetries between the hemispheres. Here, we describe how this lateralization shapes the development of several cognitive domains, ranging from visuo-spatial and numerical cognition to language, social cognition, and even aesthetic appreciation, and leads to the emergence of asymmetries in behaviour. We discuss the neuropsychological and educational implications of these emergent asymmetries and suggest future research approaches. KW - asymmetry KW - global KW - local KW - spatial frequencies KW - temporal frequencies KW - embodied cognition Y1 - 2020 U6 - https://doi.org/10.3390/sym12122083 SN - 2073-8994 VL - 12 IS - 12 PB - MDPI CY - Basel ER - TY - JOUR A1 - Strauss, Volker A1 - Wang, Huize A1 - Delacroix, Simon A1 - Ledendecker, Marc A1 - Wessig, Pablo T1 - Carbon nanodots revised BT - the thermal citric acid/urea reaction JF - Chemical science N2 - Luminescent compounds obtained from the thermal reaction of citric acid and urea have been studied and utilized in different applications in the past few years. The identified reaction products range from carbon nitrides over graphitic carbon to distinct molecular fluorophores. On the other hand, the solid, non-fluorescent reaction product produced at higher temperatures has been found to be a valuable precursor for the CO2-laser-assisted carbonization reaction in carbon laser-patterning. This work addresses the question of structural identification of both, the fluorescent and non-fluorescent reaction products obtained in the thermal reaction of citric acid and urea. The reaction products produced during autoclave-microwave reactions in the melt were thoroughly investigated as a function of the reaction temperature and the reaction products were subsequently separated by a series of solvent extractions and column chromatography. The evolution of a green molecular fluorophore, namely HPPT, was confirmed and a full characterization study on its structure and photophysical properties was conducted. The additional blue fluorescence is attributed to oligomeric ureas, which was confirmed by complementary optical and structural characterization. These two components form strong hydrogen-bond networks which eventually react to form solid, semi-crystalline particles with a size of similar to 7 nm and an elemental composition of 46% C, 22% N, and 29% O. The structural features and properties of all three main components were investigated in a comprehensive characterization study. Y1 - 2020 U6 - https://doi.org/10.1039/d0sc01605e SN - 2041-6520 SN - 2041-6539 VL - 11 IS - 31 SP - 8256 EP - 8266 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Lehr, Christian A1 - Lischeid, Gunnar T1 - Efficient screening of groundwater head monitoring data for anthropogenic effects and measurement errors JF - Hydrology and Earth System Sciences N2 - Groundwater levels are monitored by environmental agencies to support the sustainable use of groundwater resources. For this purpose continuous and spatially comprehensive monitoring in high spatial and temporal resolution is desired. This leads to large datasets that have to be checked for quality and analysed to distinguish local anthropogenic influences from natural variability of the groundwater level dynamics at each well. Both technical problems with the measurements as well as local anthropogenic influences can lead to local anomalies in the hydrographs. We suggest a fast and efficient screening method for the identification of well-specific peculiarities in hydrographs of groundwater head monitoring networks. The only information required is a set of time series of groundwater heads all measured at the same instants of time. For each well of the monitoring network a reference hydrograph is calculated, describing expected "normal" behaviour at the respective well as is typical for the monitored region. The reference hydrograph is calculated by multiple linear regression of the observed hydrograph with the "stable" principal components (PCs) of a principal component analysis of all groundwater head series of the network as predictor variables. The stable PCs are those PCs which were found in a random subsampling procedure to be rather insensitive to the specific selection of the analysed observation wells, i.e. complete series, and to the specific selection of measurement dates. Hence they can be considered to be representative for the monitored region in the respective period. The residuals of the reference hydrograph describe local deviations from the normal behaviour. Peculiarities in the residuals allow the data to be checked for measurement errors and the wells with a possible anthropogenic influence to be identified. The approach was tested with 141 groundwater head time series from the state authority groundwater monitoring network in northeastern Germany covering the period from 1993 to 2013 at an approximately weekly frequency of measurement. KW - streamflow variability KW - principal components KW - united states KW - time-seriesa KW - water KW - network KW - nonstationarity KW - fluctuations KW - rotation Y1 - 2020 U6 - https://doi.org/10.5194/hess-24-501-2020 SN - 1027-5606 SN - 1607-7938 VL - 24 IS - 2 SP - 501 EP - 513 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Makwana, Kirit D. A1 - Yan, Huirong T1 - Properties of magnetohydrodynamic modes in compressively driven plasma turbulence JF - Physical Review X N2 - We study properties of magnetohydrodynamic (MHD) eigenmodes by decomposing the data of MHD simulations into linear MHD modes-namely, the Alfven, slow magnetosonic, and fast magnetosonic modes. We drive turbulence with a mixture of solenoidal and compressive driving while varying the Alfven Mach number (M-A), plasma beta, and the sonic Mach number from subsonic to transsonic. We find that the proportion of fast and slow modes in the mode mixture increases with increasing compressive forcing. This proportion of the magnetosonic modes can also become the dominant fraction in the mode mixture. The anisotropy of the modes is analyzed by means of their structure functions. The Alfven-mode anisotropy is consistent with the Goldreich-Sridhar theory. We find a transition from weak to strong Alfvenic turbulence as we go from low to high M-A. The slow-mode properties are similar to the Alfven mode. On the other hand, the isotropic nature of fast modes is verified in the cases where the fast mode is a significant fraction of the mode mixture. The fast-mode behavior does not show any transition in going from low to high M-A. We find indications that there is some interaction between the different modes, and the properties of the dominant mode can affect the properties of the weaker modes. This work identifies the conditions under which magnetosonic modes can be a major fraction of turbulent astrophysical plasmas, including the regime of weak turbulence. Important astrophysical implications for cosmic-ray transport and magnetic reconnection are discussed. KW - Astrophysics KW - Plasma Physics Y1 - 2020 U6 - https://doi.org/10.1103/PhysRevX.10.031021 SN - 2160-3308 VL - 10 IS - 3 PB - American Physical Society (APS) CY - College Park ER - TY - GEN A1 - Makwana, Kirit D. A1 - Yan, Huirong T1 - Properties of magnetohydrodynamic modes in compressively driven plasma turbulence T2 - Postprints der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe N2 - We study properties of magnetohydrodynamic (MHD) eigenmodes by decomposing the data of MHD simulations into linear MHD modes-namely, the Alfven, slow magnetosonic, and fast magnetosonic modes. We drive turbulence with a mixture of solenoidal and compressive driving while varying the Alfven Mach number (M-A), plasma beta, and the sonic Mach number from subsonic to transsonic. We find that the proportion of fast and slow modes in the mode mixture increases with increasing compressive forcing. This proportion of the magnetosonic modes can also become the dominant fraction in the mode mixture. The anisotropy of the modes is analyzed by means of their structure functions. The Alfven-mode anisotropy is consistent with the Goldreich-Sridhar theory. We find a transition from weak to strong Alfvenic turbulence as we go from low to high M-A. The slow-mode properties are similar to the Alfven mode. On the other hand, the isotropic nature of fast modes is verified in the cases where the fast mode is a significant fraction of the mode mixture. The fast-mode behavior does not show any transition in going from low to high M-A. We find indications that there is some interaction between the different modes, and the properties of the dominant mode can affect the properties of the weaker modes. This work identifies the conditions under which magnetosonic modes can be a major fraction of turbulent astrophysical plasmas, including the regime of weak turbulence. Important astrophysical implications for cosmic-ray transport and magnetic reconnection are discussed. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 1225 KW - mhd turbulence KW - star formation KW - simulations KW - Anisotropy KW - diffusion Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-531607 SN - 1866-8372 VL - 10 IS - 3 PB - American Physical Society (APS) CY - College Park ER - TY - JOUR A1 - Halilbasic, Emina A1 - Fuerst, Elisabeth A1 - Heiden, Denise A1 - Japtok, Lukasz A1 - Diesner, Susanne C. A1 - Trauner, Michael A1 - Kulu, Askin A1 - Jaksch, Peter A1 - Hoetzenecker, Konrad A1 - Kleuser, Burkhard A1 - Kazemi-Shirazi, Lili A1 - Untersmayr, Eva T1 - Plasma levels of the bioactive sphingolipid metabolite S1P in adult cystic fibrosis patients BT - potential target for immunonutrition? JF - Nutrients N2 - Recent research has linked sphingolipid (SL) metabolism with cystic fibrosis transmembrane conductance regulator (CFTR) activity, affecting bioactive lipid mediator sphingosine-1-phosphate (S1P). We hypothesize that loss of CFTR function in cystic fibrosis (CF) patients influenced plasma S1P levels. Total and unbound plasma S1P levels were measured in 20 lung-transplanted adult CF patients and 20 healthy controls by mass spectrometry and enzyme-linked immunosorbent assay (ELISA). S1P levels were correlated with CFTR genotype, routine laboratory parameters, lung function and pathogen colonization, and clinical symptoms. Compared to controls, CF patients showed lower unbound plasma S1P, whereas total S1P levels did not differ. A positive correlation of total and unbound S1P levels was found in healthy controls, but not in CF patients. Higher unbound S1P levels were measured in Delta F508-homozygous compared to Delta F508-heterozygous CF patients (p = 0.038), accompanied by higher levels of HDL in Delta F508-heterozygous patients. Gastrointestinal symptoms were more common in Delta F508 heterozygotes compared to Delta F508 homozygotes. This is the first clinical study linking plasma S1P levels with CFTR function and clinical presentation in adult CF patients. Given the emerging role of immunonutrition in CF, our study might pave the way for using S1P as a novel biomarker and nutritional target in CF. KW - sphingolipids KW - sphingosine-1-phosphate KW - intestine KW - high density KW - lipoproteins KW - cystic fibrosis KW - Delta F508 mutation KW - immunonutrition Y1 - 2020 U6 - https://doi.org/10.3390/nu12030765 SN - 2072-6643 VL - 12 IS - 3 PB - MDPI CY - Basel ER - TY - JOUR A1 - Schwetlick, Lisa A1 - Rothkegel, Lars Oliver Martin A1 - Trukenbrod, Hans Arne A1 - Engbert, Ralf T1 - Modeling the effects of perisaccadic attention on gaze statistics during scene viewing JF - Communications biology N2 - Lisa Schwetlick et al. present a computational model linking visual scan path generation in scene viewing to physiological and experimental work on perisaccadic covert attention, the act of attending to an object visually without obviously moving the eyes toward it. They find that integrating covert attention into predictive models of visual scan paths greatly improves the model's agreement with experimental data.
How we perceive a visual scene depends critically on the selection of gaze positions. For this selection process, visual attention is known to play a key role in two ways. First, image-features attract visual attention, a fact that is captured well by time-independent fixation models. Second, millisecond-level attentional dynamics around the time of saccade drives our gaze from one position to the next. These two related research areas on attention are typically perceived as separate, both theoretically and experimentally. Here we link the two research areas by demonstrating that perisaccadic attentional dynamics improve predictions on scan path statistics. In a mathematical model, we integrated perisaccadic covert attention with dynamic scan path generation. Our model reproduces saccade amplitude distributions, angular statistics, intersaccadic turning angles, and their impact on fixation durations as well as inter-individual differences using Bayesian inference. Therefore, our result lend support to the relevance of perisaccadic attention to gaze statistics. KW - Computational models KW - Human behaviour KW - Visual system Y1 - 2020 U6 - https://doi.org/10.1038/s42003-020-01429-8 SN - 2399-3642 VL - 3 IS - 1 PB - Springer Nature CY - London ER - TY - JOUR A1 - Mishurova, Tatiana A1 - Sydow, Benjamin A1 - Thiede, Tobias A1 - Sizova, Irina A1 - Ulbricht, Alexander A1 - Bambach, Markus A1 - Bruno, Giovanni T1 - Residual stress and microstructure of a Ti-6Al-4V Wire Arc Additive Manufacturing hybrid demonstrator JF - Metals N2 - Wire Arc Additive Manufacturing (WAAM) features high deposition rates and, thus, allows production of large components that are relevant for aerospace applications. However, a lot of aerospace parts are currently produced by forging or machining alone to ensure fast production and to obtain good mechanical properties; the use of these conventional process routes causes high tooling and material costs. A hybrid approach (a combination of forging and WAAM) allows making production more efficient. In this fashion, further structural or functional features can be built in any direction without using additional tools for every part. By using a combination of forging basic geometries with one tool set and adding the functional features by means of WAAM, the tool costs and material waste can be reduced compared to either completely forged or machined parts. One of the factors influencing the structural integrity of additively manufactured parts are (high) residual stresses, generated during the build process. In this study, the triaxial residual stress profiles in a hybrid WAAM part are reported, as determined by neutron diffraction. The analysis is complemented by microstructural investigations, showing a gradient of microstructure (shape and size of grains) along the part height. The highest residual stresses were found in the transition zone (between WAAM and forged part). The total stress range showed to be lower than expected for WAAM components. This could be explained by the thermal history of the component. KW - residual stress KW - WAAM KW - Ti-6Al-4V KW - additive manufacturing KW - neutron KW - diffraction KW - hybrid manufacturing Y1 - 2020 U6 - https://doi.org/10.3390/met10060701 SN - 2075-4701 VL - 10 IS - 6 PB - MDPI CY - Basel ER - TY - JOUR A1 - Oesch, Tyler A1 - Weise, Frank A1 - Bruno, Giovanni T1 - Detection and quantification of cracking in concrete aggregate through virtual data fusion of X-ray computed tomography images JF - Materials N2 - In this work, which is part of a larger research program, a framework called "virtual data fusion" was developed to provide an automated and consistent crack detection method that allows for the cross-comparison of results from large quantities of X-ray computed tomography (CT) data. A partial implementation of this method in a custom program was developed for use in research focused on crack quantification in alkali-silica reaction (ASR)-sensitive concrete aggregates. During the CT image processing, a series of image analyses tailored for detecting specific, individual crack-like characteristics were completed. The results of these analyses were then "fused" in order to identify crack-like objects within the images with much higher accuracy than that yielded by any individual image analysis procedure. The results of this strategy demonstrated the success of the program in effectively identifying crack-like structures and quantifying characteristics, such as surface area and volume. The results demonstrated that the source of aggregate has a very significant impact on the amount of internal cracking, even when the mineralogical characteristics remain very similar. River gravels, for instance, were found to contain significantly higher levels of internal cracking than quarried stone aggregates of the same mineralogical type. KW - X-ray computed tomography (CT) KW - concrete KW - alkali-silica reaction (ASR) KW - ASR-sensitive aggregate KW - solubility test KW - specific surface area KW - crack KW - detection KW - automated image processing KW - damage quantification Y1 - 2020 U6 - https://doi.org/10.3390/ma13183921 SN - 1996-1944 VL - 13 IS - 18 PB - MDPI CY - Basel ER - TY - JOUR A1 - Léonard, Fabien A1 - Zhang, Zhen A1 - Krebs, Holger A1 - Bruno, Giovanni T1 - Structural and morphological quantitative 3D characterisation of ammonium nitrate prills by X-ray computed tomography JF - Materials N2 - The mixture of ammonium nitrate (AN) prills and fuel oil (FO), usually referred to as ANFO, is extensively used in the mining industry as a bulk explosive. One of the major performance predictors of ANFO mixtures is the fuel oil retention, which is itself governed by the complex pore structure of the AN prills. In this study, we present how X-ray computed tomography (XCT), and the associated advanced data processing workflow, can be used to fully characterise the structure and morphology of AN prills. We show that structural parameters such as volume fraction of the different phases and morphological parameters such as specific surface area and shape factor can be reliably extracted from the XCT data, and that there is a good agreement with the measured oil retention values. Importantly, oil retention measurements (qualifying the efficiency of ANFO as explosives) correlate well with the specific surface area determined by XCT. XCT can therefore be employed non-destructively; it can accurately evaluate and characterise porosity in ammonium nitrate prills, and even predict their efficiency. KW - ANFO KW - explosives KW - specific surface area KW - porosity KW - XCT KW - data processing Y1 - 2020 U6 - https://doi.org/10.3390/ma13051230 SN - 1996-1944 VL - 13 IS - 5 PB - MDPI CY - Basel ER - TY - JOUR A1 - Szeska, Christoph A1 - Richter, Jan A1 - Wendt, Julia A1 - Weymar, Mathias A1 - Hamm, Alfons O. T1 - Promoting long-term inhibition of human fear responses by non-invasive transcutaneous vagus nerve stimulation during extinction training JF - Scientific reports N2 - Inhibiting fear-related thoughts and defensive behaviors when they are no longer appropriate to the situation is a prerequisite for flexible and adaptive responding to changing environments. Such inhibition of defensive systems is mediated by ventromedial prefrontal cortex (vmPFC), limbic basolateral amygdala (BLA), and brain stem locus-coeruleus noradrenergic system (LC-NAs). Non-invasive, transcutaneous vagus nerve stimulation (tVNS) has shown to activate this circuit. Using a multiple-day single-cue fear conditioning and extinction paradigm, we investigated long-term effects of tVNS on inhibition of low-level amygdala modulated fear potentiated startle and cognitive risk assessments. We found that administration of tVNS during extinction training facilitated inhibition of fear potentiated startle responses and cognitive risk assessments, resulting in facilitated formation, consolidation and long-term recall of extinction memory, and prevention of the return of fear. These findings might indicate new ways to increase the efficacy of exposure-based treatments of anxiety disorders. KW - Amygdala KW - Autonomic nervous system KW - Electromyography – EMG KW - Extinction KW - Fear conditioning Y1 - 2020 U6 - https://doi.org/10.1038/s41598-020-58412-w SN - 2045-2322 VL - 10 IS - 1 PB - Nature Publishing Group CY - London ER - TY - JOUR A1 - Vasishth, Shravan T1 - Using approximate Bayesian computation for estimating parameters in the cue-based retrieval model of sentence processing JF - MethodsX N2 - A commonly used approach to parameter estimation in computational models is the so-called grid search procedure: the entire parameter space is searched in small steps to determine the parameter value that provides the best fit to the observed data. This approach has several disadvantages: first, it can be computationally very expensive; second, one optimal point value of the parameter is reported as the best fit value; we cannot quantify our uncertainty about the parameter estimate. In the main journal article that this methods article accompanies (Jager et al., 2020, Interference patterns in subject-verb agreement and reflexives revisited: A large-sample study, Journal of Memory and Language), we carried out parameter estimation using Approximate Bayesian Computation (ABC), which is a Bayesian approach that allows us to quantify our uncertainty about the parameter's values given data. This customization has the further advantage that it allows us to generate both prior and posterior predictive distributions of reading times from the cue-based retrieval model of Lewis and Vasishth, 2005.
Instead of the conventional method of using grid search, we use Approximate Bayesian Computation (ABC) for parameter estimation in the [4] model.
The ABC method of parameter estimation has the advantage that the uncertainty of the parameter can be quantified. KW - Bayesian parameter estimation KW - Prior and posterior predictive KW - distributions KW - Psycholinguistics Y1 - 2020 U6 - https://doi.org/10.1016/j.mex.2020.100850 SN - 2215-0161 VL - 7 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Weimar, Jannis A1 - Köhli, Markus A1 - Budach, Christian A1 - Schmidt, Ulrich T1 - Large-scale boron-lined neutron detection systems as a 3He alternative for Cosmic Ray Neutron Sensing JF - Frontiers in water N2 - Cosmic-Ray neutron sensors are widely used to determine soil moisture on the hectare scale. Precise measurements, especially in the case of mobile application, demand for neutron detectors with high counting rates and high signal-to-noise ratios. For a long time Cosmic Ray Neutron Sensing (CRNS) instruments have relied on He-3 as an efficient neutron converter. Its ongoing scarcity demands for technological solutions using alternative converters, which are Li-6 and B-10. Recent developments lead to a modular neutron detector consisting of several B-10-lined proportional counter tubes, which feature high counting rates via its large surface area. The modularity allows for individual shieldings of different segments within the detector featuring the capability of gaining spectral information about the detected neutrons. This opens the possibility for active signal correction, especially useful when applied to mobile measurements, where the influence of constantly changing near-field to the overall signal should be corrected. Furthermore, the signal-to-noise ratio could be increased by combining pulse height and pulse length spectra to discriminate between neutrons and other environmental radiation. This novel detector therefore combines high-selective counting electronics with large-scale instrumentation technology. KW - CRNS KW - neutron KW - detector KW - soil moisture KW - readout electronics KW - boron-10 KW - helium-3 alternative Y1 - 2020 U6 - https://doi.org/10.3389/frwa.2020.00016 SN - 2624-9375 VL - 2 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Wang, Hao A1 - Wang, Xuejiang A1 - Wang, Weishi A1 - Su, Yinglong A1 - Zhao, Jianfu T1 - Reuse of a phosphorus recovery product (struvite/palygorskite) from nutrient wastewater for copper remediation in aqueous solution and soil JF - Geoderma : an international journal of soil science N2 - In this study, a phosphorus recovery product, struvite palygorskite (S-PAL), obtained from nutrient-rich wastewater by using MgO modified palygorskite was applied for copper remediation in aqueous solution and contaminated soil to achieve waste recycling. The effects of contact time, initial pH, initial Cu(II) concentration and reaction temperature on Cu(II) adsorption in aqueous solution were intensively testified. Pseudo-second-order model was able to properly describe Cu(II) adsorption kinetics by using palygorskite (PAL) and S-PAL, and S-PAL exhibited higher adsorption amount (106.27 mg/g) than PAL (8.46 mg/g) at pH of 4. Cu(II) adsorption on PAL and S-PAL could be well fitted by Freundlich isotherm and Langmuir isotherm, respectively. The calculated thermodynamic parameters indicated that Cu(II) adsorption onto PAL and S-PAL were spontaneous and endothermic. A 28-day soil incubation experiment was conducted to evaluate the effects of PAL and S-PAL with three different rates (1%, 5% and 10% w/w) on Cu immobilization in contaminated soil. In the immobilization test, Cu extracted by 0.01 mol/L CaCl2 after seven days incubation significantly decreased with increasing rate of PAL and S-PAL. BCR sequential extraction results showed the significant decrease of acid soluble Cu and a concomitant increase of the residual fraction of Cu after S-PAL and PAL addition. XRD patterns of soil samples after treatment by PAL and S-PAL showed the formation of Cu0.6Mg1.3Si2O6 and Cu-3.04(PO4)(2)OH0.08 center dot 2H(2)O, which indicated that silanol groups and phosphate exhibited affinity for Cu in the soil. KW - palygorskite KW - struvite KW - adsorption KW - copper immobilization KW - waste reuse Y1 - 2020 U6 - https://doi.org/10.1016/j.geoderma.2019.113955 SN - 0016-7061 SN - 1872-6259 VL - 357 PB - Elsevier Science CY - Amsterdam [u.a.] ER - TY - JOUR A1 - Zimmermann, Heike Hildegard A1 - Stoof-Leichsenring, Kathleen Rosemarie A1 - Kruse, Stefan A1 - Müller, Juliane A1 - Stein, Ruediger A1 - Tiedemann, Ralf A1 - Herzschuh, Ulrike T1 - Changes in the composition of marine and sea-ice diatoms derived from sedimentary ancient DNA of the eastern Fram Strait over the past 30 000 years JF - Ocean science N2 - The Fram Strait is an area with a relatively low and irregular distribution of diatom microfossils in surface sediments, and thus microfossil records are scarce, rarely exceed the Holocene, and contain sparse information about past richness and taxonomic composition. These attributes make the Fram Strait an ideal study site to test the utility of sedimentary ancient DNA (sedaDNA) metabarcoding. Amplifying a short, partial rbcL marker from samples of sediment core MSM05/5-712-2 resulted in 95.7% of our sequences being assigned to diatoms across 18 different families, with 38.6% of them being resolved to species and 25.8% to genus level. Independent replicates show a high similarity of PCR products, especially in the oldest samples. Diatom sedaDNA richness is highest in the Late Weichselian and lowest in Mid- and Late Holocene samples. Taxonomic composition is dominated by cold-water and sea-ice-associated diatoms and suggests several reorganisations - after the Last Glacial Maximum, after the Younger Dryas, and after the Early and after the Mid-Holocene. Different sequences assigned to, amongst others, Chaetoceros socialis indicate the detectability of intra-specific diversity using sedaDNA. We detect no clear pattern between our diatom sedaDNA record and the previously published IP25 record of this core, although proportions of pennate diatoms increase with higher IP25 concentrations and proportions of Nitzschia cf. frigida exceeding 2% of the assemblage point towards past sea-ice presence. Y1 - 2020 U6 - https://doi.org/10.5194/os-16-1017-2020 SN - 1812-0784 VL - 16 IS - 5 SP - 1017 EP - 1032 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Guzman, Diego A. A1 - Samprogna Mohor, Guilherme A1 - Mendiondo, Eduardo Mario T1 - Multi-year index-based insurance for adapting Water Utility Companies to hydrological drought BT - case study of a water supply system of the Sao Paulo metropolitan region, Brazil JF - Water N2 - The sustainability of water utility companies is threatened by non-stationary drivers, such as climate and anthropogenic changes. To cope with potential economic losses, instruments such as insurance are useful for planning scenarios and mitigating impacts, but data limitations and risk uncertainties affect premium estimation and, consequently, business sustainability. This research estimated the possible economic impacts of business interruption to the Sao Paulo Water Utility Company derived from hydrological drought and how this could be mitigated with an insurance scheme. Multi-year insurance (MYI) was proposed through a set of "change" drivers: the climate driver, through forcing the water evaluation and planning system (WEAP) hydrological tool; the anthropogenic driver, through water demand projections; and the economic driver, associated with recent water price policies adopted by the utility company during water scarcity periods. In our study case, the evaluated indices showed that MYI contracts that cover only longer droughts, regardless of the magnitude, offer better financial performance than contracts that cover all events (in terms of drought duration). Moreover, through MYI contracts, we demonstrate solvency for the insurance fund in the long term and an annual average actuarially fair premium close to the total expected revenue reduction. KW - multi-year insurance KW - climate change KW - hydrological drought KW - water KW - security and economy Y1 - 2020 U6 - https://doi.org/10.3390/w12112954 SN - 2073-4441 VL - 12 IS - 11 PB - MDPI CY - Basel ER - TY - JOUR A1 - Baerenzung, Julien A1 - Holschneider, Matthias A1 - Wicht, Johannes A1 - Lesur, Vincent A1 - Sanchez, Sabrina T1 - The Kalmag model as a candidate for IGRF-13 JF - Earth, planets and space N2 - We present a new model of the geomagnetic field spanning the last 20 years and called Kalmag. Deriving from the assimilation of CHAMP and Swarm vector field measurements, it separates the different contributions to the observable field through parameterized prior covariance matrices. To make the inverse problem numerically feasible, it has been sequentialized in time through the combination of a Kalman filter and a smoothing algorithm. The model provides reliable estimates of past, present and future mean fields and associated uncertainties. The version presented here is an update of our IGRF candidates; the amount of assimilated data has been doubled and the considered time window has been extended from [2000.5, 2019.74] to [2000.5, 2020.33]. KW - Geomagnetic field KW - Secular variation KW - Assimilation KW - Kalman filter KW - Machine learning Y1 - 2020 U6 - https://doi.org/10.1186/s40623-020-01295-y SN - 1880-5981 VL - 72 IS - 1 PB - Springer CY - New York ER - TY - JOUR A1 - Zhang, Yan-qiu A1 - Guo, Zeng-hui A1 - Chen, Dai-zhao T1 - Porosity distribution in cyclic dolomites of the Lower Qiulitag Group (Upper Cambrian) in northwestern Tarim Basin, China JF - China geology N2 - Increasing interests in hydrocarbon resources at depths have drawn greater attentions to the deeply-buried carbonate reservoirs in the Tarim Basin in China. In this study, the cyclic dolomite rocks of Upper Cambrian Lower Qiulitag Group from four outcrop sections in northwestern Tarim Basin were selected to investigate and evaluate the petrophysical properties in relation to depositional facies and cyclicity. The Lower Qiulitag Group includes ten lithofacies, which were deposited in intermediate to shallow subtidal, restricted shallow subtidal, intertidal, and supratidal environments on a carbonate ramp system. These lithofacies are vertically stacked into repeated shallowing-upward, meter-scale cycles which are further grouped into six third-order depositional sequences (Sq1 to Sq6). There are variable types of pore spaces in the Lower Qiulitag Group dolomite rocks, including interparticle, intraparticle, and fenestral pores of primary origin, inter crystal, and vuggy pores of late diagenetic modification. The porosity in the dolomites is generally facies-selective as that the microbially-originated thrombolites and stromatolites generally yield a relatively high porosity. In contrast, the high-energy ooidal grainstones generally have very low porosity. In this case, the microbialite-based peritidal cycles and peritidal cycle-dominated highstand (or regressive) successions have relatively high volumes of pore spaces, although highly fluctuating (or vertical inhomogeneous). Accordingly, the grainstone-based subtidal cycles and subtidal cycle-dominated transgressive successions generally yield extremely low porosity. This scenario indicates that porosity development and preservation in the thick dolomite successions are primarily controlled by depositional facies which were influenced by sea-level fluctuations of different orders and later diagenetic overprinting. KW - Dolomites KW - porosity KW - cyclicity KW - Upper Cambrian KW - stromatolite KW - microbial KW - build up KW - oil-gas basin KW - oil-gas exploration engineering KW - Tarim Basin KW - China Y1 - 2020 UR - http://en.cgsjournals.com/zgdzdcqkw-data/zgdzyw/2020/3/PDF/cg2020026.pdf SN - 2096-5192 SN - 2589-9430 VL - 3 IS - 3 SP - 425 EP - 444 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Schneider, Jan Niklas A1 - Brick, Timothy R. A1 - Dziobek, Isabel T1 - Distance to the neutral face predicts arousal ratings of dynamic facial expressions in individuals with and without Autism Spectrum Disorder JF - Frontiers in psychology N2 - Arousal is one of the dimensions of core affect and frequently used to describe experienced or observed emotional states. While arousal ratings of facial expressions are collected in many studies it is not well understood how arousal is displayed in or interpreted from facial expressions. In the context of socioemotional disorders such as Autism Spectrum Disorder, this poses the question of a differential use of facial information for arousal perception. In this study, we demonstrate how automated face-tracking tools can be used to extract predictors of arousal judgments. We find moderate to strong correlations among all measures of static information on one hand and all measures of dynamic information on the other. Based on these results, we tested two measures, average distance to the neutral face and average facial movement speed, within and between neurotypical individuals (N = 401) and individuals with autism (N = 19). Distance to the neutral face was predictive of arousal in both groups. Lower mean arousal ratings were found for the autistic group, but no difference in correlation of the measures and arousal ratings could be found between groups. Results were replicated in an high autistic traits group. The findings suggest a qualitatively similar perception of arousal for individuals with and without autism. No correlations between valence ratings and any of the measures could be found, emphasizing the specificity of our tested measures. Distance and speed predictors share variability and thus speed should not be discarded as a predictor of arousal ratings. KW - arousal KW - face tracking KW - facial expression KW - autism KW - perception KW - perception differences KW - measure development Y1 - 2020 U6 - https://doi.org/10.3389/fpsyg.2020.577494 SN - 1664-1078 VL - 11 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Müller, Anke Katharina A1 - Helms, Ute A1 - Rohrer, Carsten A1 - Möhler, Monika A1 - Hellwig, Frank A1 - Glei, Michael A1 - Schwerdtle, Tanja A1 - Lorkowski, Stefan A1 - Dawczynski, Christine T1 - Nutrient composition of different hazelnut cultivars grown in Germany JF - Foods N2 - Hazelnuts are rarely cultivated in Germany, although they are a valuable source for macro- and micronutrients and can thus contribute to a healthy diet. Near the present, 15 varieties were cultivated in Thuringia, Germany, as a pilot study for further research. The aim of our study was to evaluate the micro- and macronutrient composition of representative, randomly mixed samples of the 15 different hazelnut cultivars. Protein, fat, and fiber contents were determined using established methods. Fatty acids, tocopherols, minerals, trace elements, and ultra-trace elements were analyzed using gas chromatography, high-performance liquid chromatography, and inductively coupled plasma triple quadrupole mass-spectrometry, respectively. We found that the different hazelnut varieties contained valuable amounts of fat, protein, dietary fiber, minerals, trace elements, and alpha-tocopherol, however, in different quantities. The variations in nutrient composition were independent of growth conditions, which were identical for all hazelnut varieties. Therefore, each hazelnut cultivar has its specific nutrient profile. KW - Corylus avellana L. KW - nutrient composition KW - hazelnut cultivars KW - minerals KW - tocopherols Y1 - 2020 U6 - https://doi.org/10.3390/foods9111596 SN - 2304-8158 VL - 9 IS - 11 PB - MDPI CY - Basel ER - TY - JOUR A1 - Wilbert, Jürgen A1 - Urton, Karolina A1 - Krull, Johanna A1 - Kulawiak, Pawel R. A1 - Schwalbe, Anja A1 - Hennemann, Thomas T1 - Teachers' accuracy in estimating social inclusion of students with and without special educational needs JF - Frontiers in education N2 - It is unclear to what extent teachers can accurately assess the social inclusion of their students with and without SEN. The study aims to shed light on these desiderata. Students (N = 1.644) with SEN (learning, behavior, and language problems) and without SEN and their teachers (N = 79) participated in the study. Sociometric peer nominations, students' self-perceived social inclusion, and teachers' assessments regarding students' social inclusion and self-perceived social inclusion were administered. The results suggest that teachers are moderately accurate in identifying social acceptance and social rejection, while accuracy is low when assessing students' self-perceived social inclusion. That said, rating accuracy varied strongly between teachers, ranging from no agreement to a perfect concordance. Teachers seem to be more accurate in estimating the social acceptance of students with learning problems. The results emphasize the importance of differentiating between various social inclusion criteria (i.e., students' self-report vs. peer nominations) and accounting for inter-individual differences in teachers' rating accuracy. KW - judgement accuracy KW - social inclusion KW - special educational needs KW - teacher KW - inclusive education KW - sociometry Y1 - 2020 U6 - https://doi.org/10.3389/feduc.2020.598330 SN - 2504-284X VL - 5 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Gonzalez-Chavarria, Ivan A1 - Duprat, Felix A1 - Roa, Francisco J. A1 - Jara, Nery A1 - Toledo, Jorge R. A1 - Miranda, Felipe A1 - Becerra, Jose A1 - Inostroza, Alejandro A1 - Kelling, Alexandra A1 - Schilde, Uwe A1 - Heydenreich, Matthias A1 - Paz, Cristian T1 - Maytenus disticha extract and an isolated β-Dihydroagarofuran induce mitochondrial depolarization and apoptosis in human cancer cells by increasing mitochondrial reactive oxygen species JF - Biomolecules N2 - Maytenus disticha (Hook F.), belonging to the Celastraceae family, is an evergreen shrub, native of the central southern mountains of Chile. Previous studies demonstrated that the total extract of M. disticha (MD) has an acetylcholinesterase inhibitory activity along with growth regulatory and insecticidal activities. beta-Dihydroagarofurans sesquiterpenes are the most active components in the plant. However, its activity in cancer has not been analyzed yet. Here, we demonstrate that MD has a cytotoxic activity on breast (MCF-7), lung (PC9), and prostate (C4-2B) human cancer cells with an IC50 (mu g/mL) of 40, 4.7, and 5 mu g/mL, respectively, an increasing Bax/Bcl2 ratio, and inducing a mitochondrial membrane depolarization. The beta-dihydroagarofuran-type sesquiterpene (MD-6), dihydromyricetin (MD-9), and dihydromyricetin-3-O-beta-glucoside (MD-10) were isolated as the major compounds from MD extracts. From these compounds, only MD-6 showed cytotoxic activity on MCF-7, PC9, and C4-2B with an IC50 of 31.02, 17.58, and 42.19 mu M, respectively. Furthermore, the MD-6 increases cell ROS generation, and MD and MD-6 induce a mitochondrial superoxide generation and apoptosis on MCF-7, PC9, and C4-2B, which suggests that the cytotoxic effect of MD is mediated in part by the beta-dihydroagarofuran-type that induces apoptosis by a mitochondrial dysfunction. KW - Maytenus disticha KW - beta-dihydroagarofuran-type sesquiterpene KW - dihydromyricetin KW - dihydromyricetin-3-O-beta-glucoside KW - cytotoxic KW - activity KW - Mitochondrial ROS Y1 - 2020 U6 - https://doi.org/10.3390/biom10030377 SN - 2218-273X VL - 10 IS - 3 PB - MDPI CY - Basel ER - TY - JOUR A1 - Brady, David A1 - Finnigan, Ryan A1 - Kohler, Ulrich A1 - Legewie, Joscha T1 - The inheritance of race revisited BT - childhood wealth and income and black–white disadvantages in adult life chances JF - Sociological Science N2 - Vast racial inequalities continue to prevail across the United States and are closely linked to economic resources. One particularly prominent argument contends that childhood wealth accounts for black–white (BW) disadvantages in life chances. This article analyzes how much childhood wealth and childhood income mediate BW disadvantages in adult life chances with Panel Study of Income Dynamics and Cross-National Equivalent File data on children from the 1980s and 1990s who were 30+ years old in 2015. Compared with previous research, we exploit longer panel data, more comprehensively assess adult life chances with 18 outcomes, and measure income and wealth more rigorously. We find large BW disadvantages in most outcomes. Childhood wealth and income mediate a substantial share of most BW disadvantages, although there are several significant BW disadvantages even after adjusting for childhood wealth and income. The evidence mostly contradicts the prominent claim that childhood wealth is more important than childhood income. Indeed, the analyses mostly show that childhood income explains more of BW disadvantages and has larger standardized coefficients than childhood wealth. We also show how limitations in prior wealth research explain why our conclusions differ. Replication with the National Longitudinal Survey of Youth and a variety of robustness checks support these conclusions. Y1 - 2020 U6 - https://doi.org/10.15195/v7.a25 SN - 2330-6696 VL - 7 IS - 25 SP - 599 EP - 627 PB - Society for Sociological Science ER - TY - JOUR A1 - Ungelenk, Johannes T1 - Émile Zola’s Climate History of the Second Empire JF - Ecozon@: European Journal of Literature, Culture and Environment N2 - This article looks at Émile Zola’s novel cycle Les Rougon-Macquart and argues that it describes its subject, the Second Empire, as a warming climate tending toward climate catastrophe. Zola’s affinity to the notion of climate is shown to be linked to his poetic employment of the concept of ‘milieu’, inspired by Hippolyte Taine. Close readings of selected passages from the Rougon-Macquart are used to work out the climatic difference between ‘the old’ and ‘the new Paris’, and the process of warming that characterises the Second Empire. Octave Mouret’s department store holds a special place in the article, as it is analysed through what the article suggests calling a ‘meteorotopos’: a location of intensified climatic conditions that accounts for an increased interaction between human and non-human actors. The department store is also one of the many sites in the novel cycle that locally prefigure the ‘global’ climate catastrophe of Paris burning, in which the Second Empire perishes. N2 - El artículo hace una lectura del ciclo de novelas Les Rougon-Macquart y argumenta que describe su sujeto, el Segundo Imperio, como un clima que se calienta y se dirige hacia una catástrofe climática. La afinidad de Zola con la noción de clima está expuesta en la connexion con su uso poetológico del concepto de ‘milieu’, inspirado en Hippolyte Taine. El artículo hace una lectura detallada de Rougon-Macquart para diferenciar entre la “vieja” y la “nueva París” y el proceso de calentamiento que caracteriza al Segundo Imperio. El gran almacén de Octave Mouret tiene un lugar protagónico en el artículo, por medio de su análisis se propone el concepto “meteorotopos”: una locación con unas condiciones climáticas intensificadas, que da cuenta de una elevada interacción entre actors humanos y no-humanos. El almacén es uno de varios espacios en el ciclo de novelas que prefiguran localmente la situación en la que el Segundo Imperio perece: la catástrofe ‘global’ de París en llamas. KW - Rougon-Marcquart KW - climate KW - milieu KW - Hippolyte Taine KW - global warming Y1 - 2020 UR - http://ecozona.eu/article/view/3181/4137 U6 - https://doi.org/10.37536/ECOZONA.2020.11.1.3181 SN - 2171-9594 VL - 11 IS - 1 SP - 9 EP - 26 PB - Alcalá de Henares CY - Instituto Universitario de Investigación en Estudios Norteamericanos "Benjamín Franklin", Universidad de Alcalá ER - TY - JOUR A1 - Faisal, Muhammad B. A1 - Gechev, Tsanko S. A1 - Müller-Röber, Bernd A1 - Dijkwel, Paul P. T1 - Putative alternative translation start site-encoding nucleotides of CPR5 regulate growth and resistance JF - BMC plant biology N2 - Background The Arabidopsis CONSTITUTIVE EXPRESSER of PATHOGENESIS-RELATED GENES 5 (CPR5) has recently been shown to play a role in gating as part of the nuclear pore complex (NPC). Mutations in CPR5 cause multiple defects, including aberrant trichomes, reduced ploidy levels, reduced growth and enhanced resistance to bacterial and fungal pathogens. The pleiotropic nature of cpr5 mutations implicates that the CPR5 protein affects multiple pathways. However, little is known about the structural features that allow CPR5 to affect the different pathways. Results Our in silico studies suggest that in addition to three clusters of putative nuclear localization signals and four or five transmembrane domains, CPR5 contains two putative alternative translation start sites. To test the role of the methionine-encoding nucleotides implicated in those sites, metCPR5 cDNAs, in which the relevant nucleotides were changed to encode glutamine, were fused to the CPR5 native promoter and the constructs transformed to cpr5-2 plants to complement cpr5-compromised phenotypes. The control and metCPR5 constructs were able to complement all cpr5 phenotypes, although the extent of complementation depended on the specific complementing plant lines. Remarkably, plants transformed with metCPR5 constructs showed larger leaves and displayed reduced resistance when challenged to Pseudomonas syringae pv Pst DC3000, as compared to control plants. Thus, the methionine-encoding nucleotides regulate growth and resistance. We propose that structural features of the CPR5 N-terminus are implicated in selective gating of proteins involved in regulating the balance between growth and resistance. Conclusion Plants need to carefully balance the amount of resources used for growth and resistance. The Arabidopsis CPR5 protein regulates plant growth and immunity. Here we show that N-terminal features of CPR5 are involved in the regulation of the balance between growth and resistance. These findings may benefit efforts to improve plant yield, while maintaining optimal levels of disease resistance. KW - CPR5 KW - plant growth KW - disease resistance KW - cell death KW - arabidopsis thaliana KW - endoreduplication Y1 - 2020 U6 - https://doi.org/10.1186/s12870-020-02485-2 SN - 1471-2229 VL - 20 IS - 1 PB - BMC CY - London ER - TY - JOUR A1 - Piekarczyk, Andreas A1 - Heitmann, Ulrike A1 - Weiß, Karl-Anders A1 - Köhl, Michael A1 - Bald, Ilko T1 - Development of a simple setup for temperature dependent mass spectrometric measurements for the investigation of outgassing effects in polymeric materials for solar application JF - Polymer testing N2 - A simple experimental setup for temperature dependent mass spectrometric measurements has been constructed. It consists of a heated sample chamber and a mass spectrometer and allows for measurements under inert gas and ambient air. Based on initial measurements on two extruded polystyrene (XPS) samples a methodology for the data analysis has been developed. With this methodology the outgassing temperature of volatile compounds, which were used as blowing agents, has been identified. Furthermore, the composition of the blowing agents has been analyzed by temperature dependent mass spectra. The results indicate the use of ambient air in one material and a mixture of the banned blowing agents R142b and R22, both hydrochlorofluorocarbons (HCFC), in the other material. The here described methodology provides an easy to use approach to identify such compounds, for example as part of environmental or quality control. Y1 - 2019 U6 - https://doi.org/10.1016/j.polymertesting.2019.106164 SN - 0142-9418 SN - 1873-2348 VL - 81 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Wojcik, Michal A1 - Brinkmann, Pia A1 - Zdunek, Rafał A1 - Riebe, Daniel A1 - Beitz, Toralf A1 - Merk, Sven A1 - Cieslik, Katarzyna A1 - Mory, David A1 - Antonczak, Arkadiusz T1 - Classification of copper minerals by handheld laser-induced breakdown spectroscopy and nonnegative tensor factorisation JF - Sensors N2 - Laser-induced breakdown spectroscopy (LIBS) analysers are becoming increasingly common for material classification purposes. However, to achieve good classification accuracy, mostly noncompact units are used based on their stability and reproducibility. In addition, computational algorithms that require significant hardware resources are commonly applied. For performing measurement campaigns in hard-to-access environments, such as mining sites, there is a need for compact, portable, or even handheld devices capable of reaching high measurement accuracy. The optics and hardware of small (i.e., handheld) devices are limited by space and power consumption and require a compromise of the achievable spectral quality. As long as the size of such a device is a major constraint, the software is the primary field for improvement. In this study, we propose a novel combination of handheld LIBS with non-negative tensor factorisation to investigate its classification capabilities of copper minerals. The proposed approach is based on the extraction of source spectra for each mineral (with the use of tensor methods) and their labelling based on the percentage contribution within the dataset. These latent spectra are then used in a regression model for validation purposes. The application of such an approach leads to an increase in the classification score by approximately 5% compared to that obtained using commonly used classifiers such as support vector machines, linear discriminant analysis, and the k-nearest neighbours algorithm. KW - LIBS KW - NTF KW - HALS KW - classification KW - copper minerals Y1 - 2020 U6 - https://doi.org/10.3390/s20185152 SN - 1424-8220 VL - 20 IS - 18 PB - MDPI CY - Basel ER - TY - GEN A1 - Jeltsch, Florian A1 - Grimm, Volker T1 - Editorial BT - thematic series "Integrating movement ecology with biodiversity research" T2 - Movement Ecology Y1 - 2020 U6 - https://doi.org/10.1186/s40462-020-00210-0 SN - 2051-3933 VL - 8 IS - 1 PB - BioMed Central CY - London ER - TY - JOUR A1 - Munjonji, Lawrence A1 - Ayisi, Kingsley Kwabena A1 - Mudongo, Edwin I. A1 - Mafeo, Tieho Paulus A1 - Behn, Kai A1 - Mokoka, Malesela Vincent A1 - Linstädter, Anja T1 - Disentangling drought and grazing effects on soil carbon stocks and CO2 fluxes in a semi-arid African Savanna JF - Frontiers in Environmental Science N2 - Grasslands cover ca. 30% of the global land surface and provide critical ecosystem services. Among them, carbon storage is one of the most important. However, grasslands are increasingly threatened by drought and overgrazing which might negatively affect soil carbon stocks. Despite this threat, there is a dearth of information on how drought and grazing jointly impact soil carbon stocks and CO2 fluxes in dryland grasslands. With the aid of a large field experiment, we studied the combined effects of a 5-year extreme drought and moderate grazing on soil carbon stocks, CO2 fluxes and soil chemical properties. Extreme drought was induced by reducing ambient rainfall by 66% using large rainout shelters. We found CO2 fluxes to strongly respond to the 5-year experimental drought. Extreme drought reduced CO2 emission rates by 32% compared to ambient conditions. CO2 fluxes averaged 5.7 mg m(-2)min(-1) under drought compared to 8.3 mg m(-2) min(-1) under ambient conditions. CO2 fluxes were, however, not influenced by grazing. At the end of the growth period, grazed plots under ambient rainfall had released 16.3 tons of CO2 ha(-1) which was 58% higher than observed on grazed plots subjected to severe drought. Soil carbon stocks were higher under drought conditions due to slower decomposition rates. Drought resulted in increased concentrations of primary macronutrients (N, P, and K), micronutrients (Zn and Mn) and pH in the top 30 cm of the soil relative to ambient conditions. The results also showed that grazing reduced the concentration of N and P in the topsoil compared to the ungrazed plots. This study provided insights on the soil carbon storage, CO2 emission rates and nutrient dynamics in a semi-arid dryland grassland as influenced by both drought and grazing. Our study also revealed that long-term extreme drought may be favorable in terms of preserving the existing soil carbon stocks through reduced CO2 release. This finding is critical for understanding future soil carbon dynamics in dryland grasslands in the face of climate change. KW - C stocks KW - CO2 flux KW - drought KW - dryland grasslands KW - grazing Y1 - 2020 U6 - https://doi.org/10.3389/fenvs.2020.590665 SN - 2296-665X VL - 8 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Stepanovska, Bisera A1 - Zivkovic, Aleksandra A1 - Enzmann, Gaby A1 - Tietz, Silvia A1 - Homann, Thomas A1 - Kleuser, Burkhard A1 - Engelhardt, Britta A1 - Stark, Holger A1 - Huwiler, Andrea T1 - Morpholino analogues of fingolimod as novel and selective S1P1 ligands with in vivo efficacy in a mouse model of experimental antigen-induced encephalomyelitis JF - International journal of molecular sciences N2 - Multiple sclerosis (MS) is a chronic, inflammatory, autoimmune disease of the central nervous system (CNS) which is associated with lower life expectancy and disability. The experimental antigen-induced encephalomyelitis (EAE) in mice is a useful animal model of MS, which allows exploring the etiopathogenetic mechanisms and testing novel potential therapeutic drugs. A new therapeutic paradigm for the treatment of MS was introduced in 2010 through the sphingosine 1-phosphate (S1P) analogue fingolimod (FTY720, Gilenya(R)), which acts as a functional S1P(1) antagonist on T lymphocytes to deplete these cells from the blood. In this study, we synthesized two novel structures, ST-1893 and ST-1894, which are derived from fingolimod and chemically feature a morpholine ring in the polar head group. These compounds showed a selective S1P(1) activation profile and a sustained S1P(1) internalization in cultures of S1P(1)-overexpressing Chinese hamster ovary (CHO)-K1 cells, consistent with a functional antagonism. In vivo, both compounds induced a profound lymphopenia in mice. Finally, these substances showed efficacy in the EAE model, where they reduced clinical symptoms of the disease, and, on the molecular level, they reduced the T-cell infiltration and several inflammatory mediators in the brain and spinal cord. In summary, these data suggest that S1P(1)-selective compounds may have an advantage over fingolimod and siponimod, not only in MS but also in other autoimmune diseases. KW - ST-1893 KW - ST-1894 KW - morpholino analogues of fingolimod KW - sphingosine KW - 1-phosphate KW - immunomodulator KW - lymphopenia KW - multiple sclerosis KW - experimental antigen-induced encephalomyelitis Y1 - 2020 U6 - https://doi.org/10.3390/ijms21186463 SN - 1422-0067 VL - 21 IS - 18 PB - MDPI CY - Basel ER - TY - JOUR A1 - Botero, David A1 - Monk, Jonathan A1 - Rodriguez Cubillos, Maria Juliana A1 - Rodriguez Cubillos, Andres Eduardo A1 - Restrepo, Mariana A1 - Bernal-Galeano, Vivian A1 - Reyes, Alejandro A1 - Gonzalez Barrios, Andres A1 - Palsson, Bernhard O. A1 - Restrepo, Silvia A1 - Bernal, Adriana T1 - Genome-scale metabolic model of Xanthomonas phaseoli pv. manihotis BT - an approach to elucidate pathogenicity at the metabolic level JF - Frontiers in genetics N2 - Xanthomonas phaseoli pv. manihotis (Xpm) is the causal agent of cassava bacterial blight, the most important bacterial disease in this crop. There is a paucity of knowledge about the metabolism of Xanthomonas and its relevance in the pathogenic process, with the exception of the elucidation of the xanthan biosynthesis route. Here we report the reconstruction of the genome-scale model of Xpm metabolism and the insights it provides into plant-pathogen interactions. The model, iXpm1556, displayed 1,556 reactions, 1,527 compounds, and 890 genes. Metabolic maps of central amino acid and carbohydrate metabolism, as well as xanthan biosynthesis of Xpm, were reconstructed using Escher (https://escher.github.io/) to guide the curation process and for further analyses. The model was constrained using the RNA-seq data of a mutant of Xpm for quorum sensing (QS), and these data were used to construct context-specific models (CSMs) of the metabolism of the two strains (wild type and QS mutant). The CSMs and flux balance analysis were used to get insights into pathogenicity, xanthan biosynthesis, and QS mechanisms. Between the CSMs, 653 reactions were shared; unique reactions belong to purine, pyrimidine, and amino acid metabolism. Alternative objective functions were used to demonstrate a trade-off between xanthan biosynthesis and growth and the re-allocation of resources in the process of biosynthesis. Important features altered by QS included carbohydrate metabolism, NAD(P)(+) balance, and fatty acid elongation. In this work, we modeled the xanthan biosynthesis and the QS process and their impact on the metabolism of the bacterium. This model will be useful for researchers studying host-pathogen interactions and will provide insights into the mechanisms of infection used by this and other Xanthomonas species. KW - Xanthomonas KW - Xpm KW - cassava bacterial blight KW - genome-scale metabolic KW - model KW - quorum sensing Y1 - 2020 U6 - https://doi.org/10.3389/fgene.2020.00837 SN - 1664-8021 VL - 11 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Trilla, Irene A1 - Drimalla, Hanna A1 - Bajbouj, Malek A1 - Dziobek, Isabel T1 - The influence of reward on facial mimicry BT - no evidence for a significant effect of oxytocin JF - Frontiers in behavioral neuroscience N2 - Recent findings suggest a role of oxytocin on the tendency to spontaneously mimic the emotional facial expressions of others. Oxytocin-related increases of facial mimicry, however, seem to be dependent on contextual factors. Given previous literature showing that people preferentially mimic emotional expressions of individuals associated with high (vs. low) rewards, we examined whether the reward value of the mimicked agent is one factor influencing the oxytocin effects on facial mimicry. To test this hypothesis, 60 male adults received 24 IU of either intranasal oxytocin or placebo in a double-blind, between-subject experiment. Next, the value of male neutral faces was manipulated using an associative learning task with monetary rewards. After the reward associations were learned, participants watched videos of the same faces displaying happy and angry expressions. Facial reactions to the emotional expressions were measured with electromyography. We found that participants judged as more pleasant the face identities associated with high reward values than with low reward values. However, happy expressions by low rewarding faces were more spontaneously mimicked than high rewarding faces. Contrary to our expectations, we did not find a significant direct effect of intranasal oxytocin on facial mimicry, nor on the reward-driven modulation of mimicry. Our results support the notion that mimicry is a complex process that depends on contextual factors, but failed to provide conclusive evidence of a role of oxytocin on the modulation of facial mimicry. KW - oxytocin KW - facial mimicry KW - reward KW - EMG KW - social modulation KW - null results Y1 - 2020 U6 - https://doi.org/10.3389/fnbeh.2020.00088 SN - 1662-5153 VL - 14 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Scherler, Dirk A1 - Schwanghart, Wolfgang T1 - Drainage divide networks - part 1: Identification and ordering in digital elevation models JF - Earth surface dynamics : ESURF N2 - We propose a novel way to measure and analyze networks of drainage divides from digital elevation models. We developed an algorithm that extracts drainage divides based on the drainage basin boundaries defined by a stream network. In contrast to streams, there is no straightforward approach to order and classify divides, although it is intuitive that some divides are more important than others. A meaningful way of ordering divides is the average distance one would have to travel down on either side of a divide to reach a common stream location. However, because measuring these distances is computationally expensive and prone to edge effects, we instead sort divide segments based on their tree-like network structure, starting from endpoints at river confluences. The sorted nature of the network allows for assigning distances to points along the divides, which can be shown to scale with the average distance downslope to the common stream location. Furthermore, because divide segments tend to have characteristic lengths, an ordering scheme in which divide orders increase by 1 at junctions mimics these distances. We applied our new algorithm to the Big Tujunga catchment in the San Gabriel Mountains of southern California and studied the morphology of the drainage divide network. Our results show that topographic metrics, like the downstream flow distance to a stream and hillslope relief, attain characteristic values that depend on the drainage area threshold used to derive the stream network. Portions along the divide network that have lower than average relief or are closer than average to streams are often distinctly asymmetric in shape, suggesting that these divides are unstable. Our new and automated approach thus helps to objectively extract and analyze divide networks from digital elevation models. Y1 - 2020 U6 - https://doi.org/10.5194/esurf-8-245-2020 SN - 2196-6311 SN - 2196-632X VL - 8 IS - 2 SP - 245 EP - 259 PB - Copernicus Publ. CY - Göttingen ER - TY - JOUR A1 - Novina, Novina A1 - Hermanussen, Michael A1 - Scheffler, Christiane A1 - Pulungan, Aman B. A1 - Ismiarto, Yoyos Dias A1 - Andriyana, Yudhie A1 - Biben, Vitriana A1 - Setiabudiawan, Budi T1 - Indonesian National Growth Reference Charts better reflect height and weight of children in West Java, Indonesia, than WHO Child Growth Standards JF - Journal of Clinical Research in Pediatric Endocrinology N2 - Objective: The Indonesia Basic Health Research 2018 indicates that Indonesian children are still among the shortest in the world. When referred to World Health Organization Child Growth Standards (WHOCGS), the prevalence of stunting reaches up to 43% in several Indonesian districts. Indonesian National Growth Reference Charts (INGRC) were established in order to better distinguish between healthy short children and children with growth disorders. We analyzed height and weight measurements of healthy Indonesian children using INGRC and WHOCGS. Methods: 6972 boys and 5800 girls (n = 12,772), aged 0-59 months old, from Bandung District were measured. Z-scores of length/height and body mass index were calculated based on INGRC and WHOCGS. Results: Under 5-year-old Indonesian children raised in Bandung are short and slim. Mean height z-scores of boys is -2.03 [standard deviation (SD) 1.31], mean height z-scores of girls is -2.03 (SD 1.31) when referred to WHOCGS indicating that over 50 % of these children are stunted. Bandung children are heterogeneous, with substantial subpopulations of tall children. Depending on the growth reference used, between 9% and 15% of them are wasted. Wasted children are on average half a SD taller than their peers. Conclusion: WHOCGS seriously overestimates the true prevalence of undernutrition in Indonesian children. The present investigation fails to support evidence of undernutrition at a prevalence similar to the over 50% prevalence of stunting (WHOCGS) versus 13.3% (INGRC). We suggest refraining from using WHOCGS, and instead applying INGRC that closely mirror height and weight increments in Bandung children. INGRC appear superior for practical and clinical purposes, such as detecting growth and developmental disorders. KW - Anthropometric measurement KW - Indonesian National Growth Reference Charts KW - World Health Organization Child Growth Standards KW - Bandung District KW - children KW - undernutrition Y1 - 2020 U6 - https://doi.org/10.4274/jcrpe.galenos.2020.2020.0044 SN - 1308-5727 SN - 1308-5735 VL - 12 IS - 4 SP - 410 EP - 419 PB - Galenos Yayincilik CY - Istanbul ER - TY - JOUR A1 - Hochmuth, Jörg A1 - Röhrig, Anne A1 - Apelojg, Benjamin T1 - Nachhaltigkeitsorientierte berufliche Handlungskompetenzen am Beispiel des Projektes „NiB-Scout - Kompetenzmodell für Nachhaltigkeit im Bäckerhandwerk“ JF - Berufs- und Wirtschaftspädagogik Online : bwp@ Y1 - 2020 UR - https://www.bwpat.de/spezial17/fernandez_kastrup_noelle-krug_spezial17.pdf SN - 1618-8543 IS - Spezial 17 SP - 13 EP - 17 PB - Institut für Berufs- und Wirtschaftspädagogik Universität Hamburg CY - Hamburg ER - TY - JOUR A1 - Luther, Laura A1 - Tiberius, Victor A1 - Brem, Alexander T1 - User experience (UX) in business, management, and psychology BT - a bibliometric mapping of the current state of research JF - Multimodal technologies and interaction : open access journal N2 - User Experience (UX) describes the holistic experience of a user before, during, and after interaction with a platform, product, or service. UX adds value and attraction to their sole functionality and is therefore highly relevant for firms. The increased interest in UX has produced a vast amount of scholarly research since 1983. The research field is, therefore, complex and scattered. Conducting a bibliometric analysis, we aim at structuring the field quantitatively and rather abstractly. We employed citation analyses, co-citation analyses, and content analyses to evaluate productivity and impact of extant research. We suggest that future research should focus more on business and management related topics. KW - bibliometric analysis KW - co-citation analysis KW - co-occurrence analysis KW - citation analysis KW - user experience KW - UX Y1 - 2020 U6 - https://doi.org/10.3390/mti4020018 SN - 2414-4088 VL - 4 IS - 2 PB - MDPI CY - Basel ER - TY - JOUR A1 - Gryzik, Stefanie A1 - Hoang, Yen A1 - Lischke, Timo A1 - Mohr, Elodie A1 - Venzke, Melanie A1 - Kadner, Isabelle A1 - Pötzsch, Josephine A1 - Groth, Detlef A1 - Radbruch, Andreas A1 - Hutloff, Andreas A1 - Baumgrass, Ria T1 - Identification of a super-functional Tfh-like subpopulation in murine lupus by pattern perception JF - eLife N2 - Dysregulated cytokine expression by T cells plays a pivotal role in the pathogenesis of autoimmune diseases. However, the identification of the corresponding pathogenic subpopulations is a challenge, since a distinction between physiological variation and a new quality in the expression of protein markers requires combinatorial evaluation. Here, we were able to identify a super-functional follicular helper T cell (Tfh)-like subpopulation in lupus-prone NZBxW mice with our binning approach "pattern recognition of immune cells (PRI)". PRI uncovered a subpopulation of IL-21(+) IFN-gamma(high) PD-1(low) CD40L(high) CXCR5(-) Bcl-6(-) T cells specifically expanded in diseased mice. In addition, these cells express high levels of TNF-alpha and IL-2, and provide B cell help for IgG production in an IL-21 and CD40L dependent manner. This super-functional T cell subset might be a superior driver of autoimmune processes due to a polyfunctional and high cytokine expression combined with Tfh-like properties. Y1 - 2020 U6 - https://doi.org/10.7554/eLife.53226 SN - 2050-084X VL - 9 PB - eLife Sciences Publications CY - Cambridge ER - TY - JOUR A1 - Herrero, Mario A1 - Thornton, Philip K. A1 - Mason-D'Croz, Daniel A1 - Palmer, Jeda A1 - Bodirsky, Benjamin Leon A1 - Pradhan, Prajal A1 - Barrett, Christopher B. A1 - Benton, Tim G. A1 - Hall, Andrew A1 - Pikaar, Ilje A1 - Bogard, Jessica R. A1 - Bonnett, Graham D. A1 - Bryan, Brett A. A1 - Campbell, Bruce M. A1 - Christensen, Svend A1 - Clark, Michael A1 - Fanzo, Jessica A1 - Godde, Cecile M. A1 - Jarvis, Andy A1 - Loboguerrero, Ana Maria A1 - Mathys, Alexander A1 - McIntyre, C. Lynne A1 - Naylor, Rosamond L. A1 - Nelson, Rebecca A1 - Obersteiner, Michael A1 - Parodi, Alejandro A1 - Popp, Alexander A1 - Ricketts, Katie A1 - Smith, Pete A1 - Valin, Hugo A1 - Vermeulen, Sonja J. A1 - Vervoort, Joost A1 - van Wijk, Mark A1 - van Zanten, Hannah H. E. A1 - West, Paul C. A1 - Wood, Stephen A. A1 - Rockström, Johan T1 - Articulating the effect of food systems innovation on the Sustainable Development Goals JF - The lancet Planetary health N2 - Food system innovations will be instrumental to achieving multiple Sustainable Development Goals (SDGs). However, major innovation breakthroughs can trigger profound and disruptive changes, leading to simultaneous and interlinked reconfigurations of multiple parts of the global food system. The emergence of new technologies or social solutions, therefore, have very different impact profiles, with favourable consequences for some SDGs and unintended adverse side-effects for others. Stand-alone innovations seldom achieve positive outcomes over multiple sustainability dimensions. Instead, they should be embedded as part of systemic changes that facilitate the implementation of the SDGs. Emerging trade-offs need to be intentionally addressed to achieve true sustainability, particularly those involving social aspects like inequality in its many forms, social justice, and strong institutions, which remain challenging. Trade-offs with undesirable consequences are manageable through the development of well planned transition pathways, careful monitoring of key indicators, and through the implementation of transparent science targets at the local level. Y1 - 2020 U6 - https://doi.org/10.1016/S2542-5196(20)30277-1 SN - 2542-5196 VL - 5 IS - 1 SP - E50 EP - E62 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Vinke, Kira A1 - Gabrysch, Sabine A1 - Paoletti, Emanuela A1 - Rockström, Johan A1 - Schellnhuber, Hans Joachim T1 - Corona and the climate BT - a comparison of two emergencies JF - Global sustainability N2 - Lessons from the corona crisis can help manage the even more daunting challenge of anthropogenic global warming. KW - adaptation and mitigation KW - ecology and biodiversity KW - human behaviour KW - natural resources (biological and non-biological) KW - policies KW - politics KW - and governance Y1 - 2020 U6 - https://doi.org/10.1017/sus.2020.20 SN - 2059-4798 VL - 3 PB - Cambridge Univ. Press CY - Cambridge ER - TY - JOUR A1 - Tranter, Morgan Alan A1 - De Lucia, Marco A1 - Wolfgramm, Markus A1 - Kühn, Michael T1 - Barite scale formation and injectivity loss models for geothermal systems JF - Water N2 - Barite scales in geothermal installations are a highly unwanted effect of circulating deep saline fluids. They build up in the reservoir if supersaturated fluids are re-injected, leading to irreversible loss of injectivity. A model is presented for calculating the total expected barite precipitation. To determine the related injectivity decline over time, the spatial precipitation distribution in the subsurface near the injection well is assessed by modelling barite growth kinetics in a radially diverging Darcy flow domain. Flow and reservoir properties as well as fluid chemistry are chosen to represent reservoirs subject to geothermal exploration located in the North German Basin (NGB) and the Upper Rhine Graben (URG) in Germany. Fluids encountered at similar depths are hotter in the URG, while they are more saline in the NGB. The associated scaling amount normalised to flow rate is similar for both regions. The predicted injectivity decline after 10 years, on the other hand, is far greater for the NGB (64%) compared to the URG (24%), due to the temperature- and salinity-dependent precipitation rate. The systems in the NGB are at higher risk. Finally, a lightweight score is developed for approximating the injectivity loss using the Damkohler number, flow rate and total barite scaling potential. This formula can be easily applied to geothermal installations without running complex reactive transport simulations. KW - reactive transport KW - radial flow KW - geothermal energy KW - scaling KW - phreeqc KW - formation damage Y1 - 2020 U6 - https://doi.org/10.3390/w12113078 SN - 2073-4441 VL - 12 IS - 11 PB - MDPI CY - Basel ER - TY - JOUR A1 - Pornsawad, Pornsarp A1 - Sungcharoen, Parada A1 - Böckmann, Christine T1 - Convergence rate of the modified Landweber method for solving inverse potential problems JF - Mathematics : open access journal N2 - In this paper, we present the convergence rate analysis of the modified Landweber method under logarithmic source condition for nonlinear ill-posed problems. The regularization parameter is chosen according to the discrepancy principle. The reconstructions of the shape of an unknown domain for an inverse potential problem by using the modified Landweber method are exhibited. KW - nonlinear operator KW - regularization KW - modified Landweber method KW - discrepancy principle KW - logarithmic source condition Y1 - 2020 U6 - https://doi.org/10.3390/math8040608 SN - 2227-7390 VL - 8 IS - 4 PB - MDPI CY - Basel ER - TY - JOUR A1 - des Aulnois, Maxime Georges A1 - Réveillon, Damien A1 - Robert, Elise A1 - Caruana, Amandine A1 - Briand, Enora A1 - Guljamow, Arthur A1 - Dittmann, Elke A1 - Amzil, Zouher A1 - Bormans, Myriam T1 - Salt shock responses of Microcystis revealed through physiological, transcript, and metabolomic analyses JF - Toxins N2 - The transfer of Microcystis aeruginosa from freshwater to estuaries has been described worldwide and salinity is reported as the main factor controlling the expansion of M. aeruginosa to coastal environments. Analyzing the expression levels of targeted genes and employing both targeted and non-targeted metabolomic approaches, this study investigated the effect of a sudden salt increase on the physiological and metabolic responses of two toxic M. aeruginosa strains separately isolated from fresh and brackish waters, respectively, PCC 7820 and 7806. Supported by differences in gene expressions and metabolic profiles, salt tolerance was found to be strain specific. An increase in salinity decreased the growth of M. aeruginosa with a lesser impact on the brackish strain. The production of intracellular microcystin variants in response to salt stress correlated well to the growth rate for both strains. Furthermore, the release of microcystins into the surrounding medium only occurred at the highest salinity treatment when cell lysis occurred. This study suggests that the physiological responses of M. aeruginosa involve the accumulation of common metabolites but that the intraspecific salt tolerance is based on the accumulation of specific metabolites. While one of these was determined to be sucrose, many others remain to be identified. Taken together, these results provide evidence that M. aeruginosa is relatively salt tolerant in the mesohaline zone and microcystin (MC) release only occurs when the capacity of the cells to deal with salt increase is exceeded. KW - Microcystis aeruginosa KW - microcystin KW - salt stress KW - metabolomic KW - transcript Y1 - 2020 U6 - https://doi.org/10.3390/toxins12030192 SN - 2072-6651 VL - 12 IS - 3 PB - MDPI CY - Basel ER - TY - JOUR A1 - Volk, Christin A1 - Brandsch, Corinna A1 - Schlegelmilch, Ulf A1 - Wensch-Dorendorf, Monika A1 - Hirche, Frank A1 - Simm, Andreas A1 - Gargum, Osama A1 - Wiacek, Claudia A1 - Braun, Peggy G. A1 - Kopp, Johannes F. A1 - Schwerdtle, Tanja A1 - Treede, Hendrik A1 - Stangl, Gabriele I. T1 - Postprandial metabolic response to rapeseed protein in healthy subjects JF - Nutrients N2 - Plant proteins have become increasingly important for ecological reasons. Rapeseed is a novel source of plant proteins with high biological value, but its metabolic impact in humans is largely unknown. A randomized, controlled intervention study including 20 healthy subjects was conducted in a crossover design. All participants received a test meal without additional protein or with 28 g of rapeseed protein isolate or soy protein isolate (control). Venous blood samples were collected over a 360-min period to analyze metabolites; satiety was assessed using a visual analog scale. Postprandial levels of lipids, urea, and amino acids increased following the intake of both protein isolates. The postprandial insulin response was lower after consumption of the rapeseed protein than after intake of the soy protein (p< 0.05), whereas the postmeal responses of glucose, lipids, interleukin-6, minerals, and urea were comparable between the two protein isolates. Interestingly, the rapeseed protein exerted stronger effects on postprandial satiety than the soy protein (p< 0.05). The postmeal metabolism following rapeseed protein intake is comparable with that of soy protein. The favorable effect of rapeseed protein on postprandial insulin and satiety makes it a valuable plant protein for human nutrition. KW - rapeseed protein KW - soy protein KW - postprandial study KW - metabolic response KW - healthy subjects Y1 - 2020 U6 - https://doi.org/10.3390/nu12082270 SN - 2072-6643 VL - 12 IS - 8 PB - MDPI CY - Basel ER - TY - JOUR A1 - Lehmann, Anika A1 - Zheng, Weishuang A1 - Ryo, Masahiro A1 - Soutschek, Katharina A1 - Roy, Julien A1 - Rongstock, Rebecca A1 - Maaß, Stefanie A1 - Rillig, Matthias C. T1 - Fungal traits important for soil aggregation JF - Frontiers in microbiology N2 - Soil structure, the complex arrangement of soil into aggregates and pore spaces, is a key feature of soils and soil biota. Among them, filamentous saprobic fungi have well-documented effects on soil aggregation. However, it is unclear what properties, or traits, determine the overall positive effect of fungi on soil aggregation. To achieve progress, it would be helpful to systematically investigate a broad suite of fungal species for their trait expression and the relation of these traits to soil aggregation. Here, we apply a trait-based approach to a set of 15 traits measured under standardized conditions on 31 fungal strains including Ascomycota, Basidiomycota, and Mucoromycota, all isolated from the same soil. We find large differences among these fungi in their ability to aggregate soil, including neutral to positive effects, and we document large differences in trait expression among strains. We identify biomass density, i.e., the density with which a mycelium grows (positive effects), leucine aminopeptidase activity (negative effects) and phylogeny as important factors explaining differences in soil aggregate formation (SAF) among fungal strains; importantly, growth rate was not among the important traits. Our results point to a typical suite of traits characterizing fungi that are good soil aggregators, and our findings illustrate the power of employing a trait-based approach to unravel biological mechanisms underpinning soil aggregation. Such an approach could now be extended also to other soil biota groups. In an applied context of restoration and agriculture, such trait information can inform management, for example to prioritize practices that favor the expression of more desirable fungal traits. KW - soil aggregation KW - traits KW - saprobic fungi KW - random forest KW - biomass KW - density KW - leucine amino peptidases Y1 - 2020 U6 - https://doi.org/10.3389/fmicb.2019.02904 SN - 1664-302X VL - 10 PB - Frontiers Media CY - Lausanne ER - TY - JOUR A1 - Rillig, Matthias C. A1 - Bielcik, Milos A1 - Chaudhary, Veer Bala A1 - Grünfeld, Leonie A1 - Maass, Stefanie A1 - Mansour, India A1 - Ryo, Masahiro A1 - Veresoglou, Stavros D. T1 - Ten simple rules for increased lab resilience JF - PLoS Computational Biology : a new community journal N2 - When running a lab we do not think about calamities, since they are rare events for which we cannot plan while we are busy with the day-to-day management and intellectual challenges of a research lab. No lab team can be prepared for something like a pandemic such as COVID-19, which has led to shuttered labs around the globe. But many other types of crises can also arise that labs may have to weather during their lifetime. What can researchers do to make a lab more resilient in the face of such exterior forces? What systems or behaviors could we adjust in 'normal' times that promote lab success, and increase the chances that the lab will stay on its trajectory? We offer 10 rules, based on our current experiences as a lab group adapting to crisis. Y1 - 2020 U6 - https://doi.org/10.1371/journal.pcbi.1008313 SN - 1553-734X SN - 1553-7358 VL - 16 IS - 11 PB - PLoS CY - San Fransisco ER - TY - JOUR A1 - Ghahremani, Sona A1 - Giese, Holger T1 - Evaluation of self-healing systems BT - An analysis of the state-of-the-art and required improvements JF - Computers N2 - Evaluating the performance of self-adaptive systems is challenging due to their interactions with often highly dynamic environments. In the specific case of self-healing systems, the performance evaluations of self-healing approaches and their parameter tuning rely on the considered characteristics of failure occurrences and the resulting interactions with the self-healing actions. In this paper, we first study the state-of-the-art for evaluating the performances of self-healing systems by means of a systematic literature review. We provide a classification of different input types for such systems and analyse the limitations of each input type. A main finding is that the employed inputs are often not sophisticated regarding the considered characteristics for failure occurrences. To further study the impact of the identified limitations, we present experiments demonstrating that wrong assumptions regarding the characteristics of the failure occurrences can result in large performance prediction errors, disadvantageous design-time decisions concerning the selection of alternative self-healing approaches, and disadvantageous deployment-time decisions concerning parameter tuning. Furthermore, the experiments indicate that employing multiple alternative input characteristics can help with reducing the risk of premature disadvantageous design-time decisions. KW - self-healing KW - failure model KW - performance KW - simulation KW - evaluation Y1 - 2020 U6 - https://doi.org/10.3390/computers9010016 SN - 2073-431X VL - 9 IS - 1 PB - MDPI CY - Basel ER - TY - JOUR A1 - Olayide, Priscilla A1 - Large, Annabel A1 - Stridh, Linnea A1 - Rabbi, Ismail A1 - Baldermann, Susanne A1 - Stavolone, Livia A1 - Alexandersson, Erik T1 - Gene expression and metabolite profiling of thirteen Nigerian cassava landraces to elucidate starch and carotenoid composition JF - Agronomy N2 - The prevalence of vitamin A deficiency in sub-Saharan Africa necessitates effective approaches to improve provitamin A content of major staple crops. Cassava holds much promise for food security in sub-Saharan Africa, but a negative correlation between beta-carotene, a provitamin A carotenoid, and dry matter content has been reported, which poses a challenge to cassava biofortification by conventional breeding. To identify suitable material for genetic transformation in tissue culture with the overall aim to increase beta-carotene and maintain starch content as well as better understand carotenoid composition, root and leaf tissues from thirteen field-grown cassava landraces were analyzed for agronomic traits, carotenoid, chlorophyll, and starch content. The expression of five genes related to carotenoid biosynthesis were determined in selected landraces. Analysis revealed a weak negative correlation between starch and beta-carotene content, whereas there was a strong positive correlation between root yield and many carotenoids including beta-carotene. Carotenoid synthesis genes were expressed in both white and yellow cassava roots, but phytoene synthase 2 (PSY2), lycopene-epsilon-cyclase (LCY epsilon), and beta-carotenoid hydroxylase (CHY beta) expression were generally higher in yellow roots. This study identified lines with reasonably high content of starch and beta-carotene that could be candidates for biofortification by further breeding or plant biotechnological means. KW - carotenoid biosynthesis KW - ultra-high performance liquid chromatography-mass spectrometry (UHPLC-MS) KW - provitamin A KW - biofortification Y1 - 2020 U6 - https://doi.org/10.3390/agronomy10030424 SN - 2073-4395 VL - 10 IS - 3 SP - 1 EP - 16 PB - MDPI CY - Basel ER - TY - JOUR A1 - Koc, Gamze A1 - Petrow, Theresia A1 - Thieken, Annegret T1 - Analysis of the most severe flood events in Turkey (1960-2014) BT - which triggering mechanisms and aggravating pathways can be identified? JF - Water / Molecular Diversity Preservation International (MDPI) N2 - The most severe flood events in Turkey were determined for the period 1960-2014 by considering the number of fatalities, the number of affected people, and the total economic losses as indicators. The potential triggering mechanisms (i.e., atmospheric circulations and precipitation amounts) and aggravating pathways (i.e., topographic features, catchment size, land use types, and soil properties) of these 25 events were analyzed. On this basis, a new approach was developed to identify the main influencing factor per event and to provide additional information for determining the dominant flood occurrence pathways for severe floods. The events were then classified through hierarchical cluster analysis. As a result, six different clusters were found and characterized. Cluster 1 comprised flood events that were mainly influenced by drainage characteristics (e.g., catchment size and shape); Cluster 2 comprised events aggravated predominantly by urbanization; steep topography was identified to be the dominant factor for Cluster 3; extreme rainfall was determined as the main triggering factor for Cluster 4; saturated soil conditions were found to be the dominant factor for Cluster 5; and orographic effects of mountain ranges characterized Cluster 6. This study determined pathway patterns of the severe floods in Turkey with regard to their main causal or aggravating mechanisms. Accordingly, geomorphological properties are of major importance in large catchments in eastern and northeastern Anatolia. In addition, in small catchments, the share of urbanized area seems to be an important factor for the extent of flood impacts. This paper presents an outcome that could be used for future urban planning and flood risk prevention studies to understand the flood mechanisms in different regions of Turkey. KW - hierarchical clustering KW - Hess-Brezowsky Grosswetterlagen classification KW - ERA5 KW - flood hazards KW - pathway KW - Turkey Y1 - 2020 U6 - https://doi.org/10.3390/w12061562 SN - 2073-4441 VL - 12 IS - 6 PB - MDPI CY - Basel ER - TY - JOUR A1 - Kellermann, Patric A1 - Schröter, Kai A1 - Thieken, Annegret A1 - Haubrock, Sören-Nils A1 - Kreibich, Heidi T1 - The object-specific flood damage database HOWAS 21 JF - Natural hazards and earth system sciences N2 - The Flood Damage Database HOWAS 21 contains object-specific flood damage data resulting from fluvial, pluvial and groundwater flooding. The datasets incorporate various variables of flood hazard, exposure, vulnerability and direct tangible damage at properties from several economic sectors. The main purpose of development of HOWAS 21 was to support forensic flood analysis and the derivation of flood damage models. HOWAS 21 was first developed for Germany and currently almost exclusively contains datasets from Germany. However, its scope has recently been enlarged with the aim to serve as an international flood damage database; e.g. its web application is now available in German and English. This paper presents the recent advancements of HOWAS 21 and highlights exemplary analyses to demonstrate the use of HOWAS 21 flood damage data. The data applications indicate a large potential of the database for fostering a better understanding and estimation of the consequences of flooding. Y1 - 2020 U6 - https://doi.org/10.5194/nhess-20-2503-2020 SN - 1561-8633 SN - 1684-9981 VL - 20 IS - 9 SP - 2503 EP - 2519 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Backhaus, Daniel A1 - Engbert, Ralf A1 - Rothkegel, Lars Oliver Martin A1 - Trukenbrod, Hans Arne T1 - Task-dependence in scene perception: Head unrestrained viewing using mobile eye-tracking JF - Journal of vision N2 - Real-world scene perception is typically studied in the laboratory using static picture viewing with restrained head position. Consequently, the transfer of results obtained in this paradigm to real-word scenarios has been questioned. The advancement of mobile eye-trackers and the progress in image processing, however, permit a more natural experimental setup that, at the same time, maintains the high experimental control from the standard laboratory setting. We investigated eye movements while participants were standing in front of a projector screen and explored images under four specific task instructions. Eye movements were recorded with a mobile eye-tracking device and raw gaze data were transformed from head-centered into image-centered coordinates. We observed differences between tasks in temporal and spatial eye-movement parameters and found that the bias to fixate images near the center differed between tasks. Our results demonstrate that current mobile eye-tracking technology and a highly controlled design support the study of fine-scaled task dependencies in an experimental setting that permits more natural viewing behavior than the static picture viewing paradigm. KW - scene viewing KW - real-world scenarios KW - mobile eye-tracking KW - task KW - influence KW - central fixation bias Y1 - 2020 U6 - https://doi.org/10.1167/jov.20.5.3 SN - 1534-7362 VL - 20 IS - 5 SP - 1 EP - 21 PB - Association for Research in Vision and Opthalmology CY - Rockville ER - TY - JOUR A1 - Kar, Manaswita A1 - Körzdörfer, Thomas T1 - Computational high throughput screening of inorganic cation based halide perovskites for perovskite only tandem solar cells JF - Materials Research Express N2 - We search for homovalent alternatives for A, B, and X-ions in ABX(3) type inorganic halide perovskites suitable for tandem solar cell applications. We replace the conventional A-site organic cation CH3NH3, by 3 inorganic cations, Cs, K, and Rb, and the B site consists of metals; Cd, Hg, Ge, Pb, and Sn This work is built on our previous high throughput screening of hybrid perovskite materials (Kar et al 2018 J. Chem. Phys. 149, 214701). By performing a systematic screening study using Density Functional Theory (DFT) methods, we found 11 suitable candidates; 2 Cs-based, 3 K-based and 6 Rb-based that are suitable for tandem solar cell applications. KW - inorganic perovskites KW - tandem solar cells KW - density functional theory Y1 - 2020 U6 - https://doi.org/10.1088/2053-1591/ab8c0d SN - 2053-1591 VL - 7 IS - 5 SP - 1 EP - 10 PB - IOP Publ. Ltd. CY - Bristol ER - TY - JOUR A1 - Brill, Fabio Alexander A1 - Passuni Pineda, Silvia A1 - Espichan Cuya, Bruno A1 - Kreibich, Heidi T1 - A data-mining approach towards damage modelling for El Nino events in Peru JF - Geomatics, natural hazards and risk N2 - Compound natural hazards likeEl Ninoevents cause high damage to society, which to manage requires reliable risk assessments. Damage modelling is a prerequisite for quantitative risk estimations, yet many procedures still rely on expert knowledge, and empirical studies investigating damage from compound natural hazards hardly exist. A nationwide building survey in Peru after theEl Ninoevent 2017 - which caused intense rainfall, ponding water, flash floods and landslides - enables us to apply data-mining methods for statistical groundwork, using explanatory features generated from remote sensing products and open data. We separate regions of different dominant characteristics through unsupervised clustering, and investigate feature importance rankings for classifying damage via supervised machine learning. Besides the expected effect of precipitation, the classification algorithms select the topographic wetness index as most important feature, especially in low elevation areas. The slope length and steepness factor ranks high for mountains and canyons. Partial dependence plots further hint at amplified vulnerability in rural areas. An example of an empirical damage probability map, developed with a random forest model, is provided to demonstrate the technical feasibility. KW - Natural hazard KW - damage model KW - residential buildings KW - data-mining KW - remote KW - sensing KW - open data Y1 - 2020 U6 - https://doi.org/10.1080/19475705.2020.1818636 SN - 1947-5705 SN - 1947-5713 VL - 11 IS - 1 SP - 1966 EP - 1990 PB - Routledge, Taylor & Francis Group CY - Abingdon ER - TY - JOUR A1 - Zozulya, Dmitry R. A1 - Kullerud, Kare A1 - Ribacki, Enrico A1 - Altenberger, Uwe A1 - Sudo, Masafumi A1 - Savchenko, Yevgeny E. T1 - The newly discovered neoproterozoic aillikite occurrence in Vinoren (Southern Norway) BT - age, geodynamic position and mineralogical evidence of diamond-bearing mantle source JF - Minerals N2 - During the period 750-600 Ma ago, prior to the final break-up of the supercontinent Rodinia, the crust of both the North American Craton and Baltica was intruded by significant amounts of rift-related magmas originating from the mantle. In the Proterozoic crust of Southern Norway, the 580 Ma old Fen carbonatite-ultramafic complex is a representative of this type of rocks. In this paper, we report the occurrence of an ultramafic lamprophyre dyke which possibly is linked to the Fen complex, although Ar-40/Ar-39 data from phenocrystic phlogopite from the dyke gave an age of 686 +/- 9 Ma. The lamprophyre dyke was recently discovered in one of the Kongsberg silver mines at Vinoren, Norway. Whole rock geochemistry, geochronological and mineralogical data from the ultramafic lamprophyre dyke are presented aiming to elucidate its origin and possible geodynamic setting. From the whole-rock composition of the Vinoren dyke, the rock could be recognized as transitional between carbonatite and kimberlite-II (orangeite). From its diagnostic mineralogy, the rock is classified as aillikite. The compositions and xenocrystic nature of several of the major and accessory minerals from the Vinoren aillikite are characteristic for diamondiferous rocks (kimberlites/lamproites/UML): Phlogopite with kinoshitalite-rich rims, chromite-spinel-ulvospinel series, Mg- and Mn-rich ilmenites, rutile and lucasite-(Ce). We suggest that the aillikite melt formed during partial melting of a MARID (mica-amphibole-rutile-ilmenite-diopside)-like source under CO2 fluxing. The pre-rifting geodynamic setting of the Vinoren aillikite before the Rodinia supercontinent breakup suggests a relatively thick SCLM (Subcontinental Lithospheric Mantle) during this stage and might indicate a diamond-bearing source for the parental melt. This is in contrast to the about 100 Ma younger Fen complex, which were derived from a thin SCLM. KW - aillikite KW - phlogopite KW - carbonate KW - spinel KW - ilmenite KW - titanite KW - diamond KW - Vinoren KW - Southern Norway Y1 - 2020 U6 - https://doi.org/10.3390/min10111029 SN - 2075-163X VL - 10 IS - 11 PB - MDPI CY - Basel ER -