TY - JOUR A1 - Dixon, Fred A1 - Trabucchi, Stefania ED - Meinel, Christoph ED - Schweiger, Stefanie ED - Staubitz, Thomas ED - Conrad, Robert ED - Alario Hoyos, Carlos ED - Ebner, Martin ED - Sancassani, Susanna ED - Żur, Agnieszka ED - Friedl, Christian ED - Halawa, Sherif ED - Gamage, Dilrukshi ED - Scott, Jeffrey ED - Kristine Jonson Carlon, May ED - Deville, Yves ED - Gaebel, Michael ED - Delgado Kloos, Carlos ED - von Schmieden, Karen T1 - Using analytics in a large virtual classroom for Open edX JF - EMOOCs 2023 : Post-Covid Prospects for Massive Open Online Courses - Boost or Backlash? N2 - The main aim of this article is to explore how learning analytics and synchronous collaboration could improve course completion and learner outcomes in MOOCs, which traditionally have been delivered asynchronously. Based on our experience with developing BigBlueButton, a virtual classroom platform that provides educators with live analytics, this paper explores three scenarios with business focused MOOCs to improve outcomes and strengthen learned skills. KW - Digitale Bildung KW - Kursdesign KW - MOOC KW - Micro Degree KW - Online-Lehre KW - Onlinekurs KW - Onlinekurs-Produktion KW - digital education KW - e-learning KW - micro degree KW - micro-credential KW - online course creation KW - online course design KW - online teaching Y1 - 2023 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-623895 SP - 113 EP - 120 PB - Universitätsverlag Potsdam CY - Potsdam ER - TY - JOUR A1 - Vasishth, Shravan T1 - Using approximate Bayesian computation for estimating parameters in the cue-based retrieval model of sentence processing JF - MethodsX N2 - A commonly used approach to parameter estimation in computational models is the so-called grid search procedure: the entire parameter space is searched in small steps to determine the parameter value that provides the best fit to the observed data. This approach has several disadvantages: first, it can be computationally very expensive; second, one optimal point value of the parameter is reported as the best fit value; we cannot quantify our uncertainty about the parameter estimate. In the main journal article that this methods article accompanies (Jager et al., 2020, Interference patterns in subject-verb agreement and reflexives revisited: A large-sample study, Journal of Memory and Language), we carried out parameter estimation using Approximate Bayesian Computation (ABC), which is a Bayesian approach that allows us to quantify our uncertainty about the parameter's values given data. This customization has the further advantage that it allows us to generate both prior and posterior predictive distributions of reading times from the cue-based retrieval model of Lewis and Vasishth, 2005.
Instead of the conventional method of using grid search, we use Approximate Bayesian Computation (ABC) for parameter estimation in the [4] model.
The ABC method of parameter estimation has the advantage that the uncertainty of the parameter can be quantified. KW - Bayesian parameter estimation KW - Prior and posterior predictive KW - distributions KW - Psycholinguistics Y1 - 2020 U6 - https://doi.org/10.1016/j.mex.2020.100850 SN - 2215-0161 VL - 7 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Brand, Ralf A1 - Nosrat, Sanaz A1 - Späth, Constantin A1 - Timme, Sinika T1 - Using COVID-19 Pandemic as a Prism: A Systematic Review of Methodological Approaches and the Quality of Empirical Studies on Physical Activity Behavior Change JF - Frontiers in Sports and Active Living N2 - Background: The COVID-19 pandemic has highlighted the importance of scientific endeavors. The goal of this systematic review is to evaluate the quality of the research on physical activity (PA) behavior change and its potential to contribute to policy-making processes in the early days of COVID-19 related restrictions. Methods: We conducted a systematic review of methodological quality of current research according to PRISMA guidelines using Pubmed and Web of Science, of articles on PA behavior change that were published within 365 days after COVID-19 was declared a pandemic by the World Health Organization (WHO). Items from the JBI checklist and the AXIS tool were used for additional risk of bias assessment. Evidence mapping is used for better visualization of the main results. Conclusions about the significance of published articles are based on hypotheses on PA behavior change in the light of the COVID-19 pandemic. Results: Among the 1,903 identified articles, there were 36% opinion pieces, 53% empirical studies, and 9% reviews. Of the 332 studies included in the systematic review, 213 used self-report measures to recollect prepandemic behavior in often small convenience samples. Most focused changes in PA volume, whereas changes in PA types were rarely measured. The majority had methodological reporting flaws. Few had very large samples with objective measures using repeated measure design (pre and during the pandemic). In addition to the expected decline in PA duration, these studies show that many of those who were active prepandemic, continued to be active during the pandemic. Conclusions: Research responded quickly at the onset of the pandemic. However, most of the studies lacked robust methodology, and PA behavior change data lacked the accuracy needed to guide policy makers. To improve the field, we propose the implementation of longitudinal cohort studies by larger organizations such as WHO to ease access to data on PA behavior, and suggest those institutions set clear standards for this research. Researchers need to ensure a better fit between the measurement method and the construct being measured, and use both objective and subjective measures where appropriate to complement each other and provide a comprehensive picture of PA behavior. KW - meta-science KW - exercise KW - methods KW - quality KW - study designs KW - standards Y1 - 2022 U6 - https://doi.org/10.3389/fspor.2022.864468 SN - 2624-9367 VL - 4 SP - 1 EP - 17 PB - Frontiers CY - Lausanne, Schweiz ER - TY - JOUR A1 - Warmt, Christian A1 - Fenzel, Carolin Kornelia A1 - Henkel, Jörg A1 - Bier, Frank Fabian T1 - Using Cy5-dUTP labelling of RPA-amplicons with downstream microarray analysis for the detection of antibiotic resistance genes JF - Scientific reports N2 - In this report we describe Cy5-dUTP labelling of recombinase-polymerase-amplification (RPA) products directly during the amplification process for the first time. Nucleic acid amplification techniques, especially polymerase-chain-reaction as well as various isothermal amplification methods such as RPA, becomes a promising tool in the detection of pathogens and target specific genes. Actually, RPA even provides more advantages. This isothermal method got popular in point of care diagnostics because of its speed and sensitivity but requires pre-labelled primer or probes for a following detection of the amplicons. To overcome this disadvantages, we performed an labelling of RPA-amplicons with Cy5-dUTP without the need of pre-labelled primers. The amplification results of various multiple antibiotic resistance genes indicating great potential as a flexible and promising tool with high specific and sensitive detection capabilities of the target genes. After the determination of an appropriate rate of 1% Cy5-dUTP and 99% unlabelled dTTP we were able to detect the bla(CTX-M15) gene in less than 1.6E-03 ng genomic DNA corresponding to approximately 200 cfu of Escherichia coli cells in only 40 min amplification time. Y1 - 2021 U6 - https://doi.org/10.1038/s41598-021-99774-z SN - 2045-2322 VL - 11 IS - 1 PB - Macmillan Publishers Limited, part of Springer Nature CY - [London] ER - TY - JOUR A1 - Crisologo, Irene A1 - Heistermann, Maik T1 - Using ground radar overlaps to verify the retrieval of calibration bias estimates from spaceborne platforms JF - Atmospheric measurement techniques : an interactive open access journal of the European Geosciences Union N2 - Many institutions struggle to tap into the potential of their large archives of radar reflectivity: these data are often affected by miscalibration, yet the bias is typically unknown and temporally volatile. Still, relative calibration techniques can be used to correct the measurements a posteriori. For that purpose, the usage of spaceborne reflectivity observations from the Tropical Rainfall Measuring Mission (TRMM) and Global Precipitation Measurement (GPM) platforms has become increasingly popular: the calibration bias of a ground radar (GR) is estimated from its average reflectivity difference to the spaceborne radar (SR). Recently, Crisologo et al. (2018) introduced a formal procedure to enhance the reliability of such estimates: each match between SR and GR observations is assigned a quality index, and the calibration bias is inferred as a quality-weighted average of the differences between SR and GR. The relevance of quality was exemplified for the Subic S-band radar in the Philippines, which is greatly affected by partial beam blockage. The present study extends the concept of quality-weighted averaging by accounting for path-integrated attenuation (PIA) in addition to beam blockage. This extension becomes vital for radars that operate at the C or X band. Correspondingly, the study setup includes a C-band radar that substantially overlaps with the S-band radar. Based on the extended quality-weighting approach, we retrieve, for each of the two ground radars, a time series of calibration bias estimates from suitable SR overpasses. As a result of applying these estimates to correct the ground radar observations, the consistency between the ground radars in the region of overlap increased substantially. Furthermore, we investigated if the bias estimates can be interpolated in time, so that ground radar observations can be corrected even in the absence of prompt SR overpasses. We found that a moving average approach was most suitable for that purpose, although limited by the absence of explicit records of radar maintenance operations. Y1 - 2020 U6 - https://doi.org/10.5194/amt-13-645-2020 SN - 1867-1381 SN - 1867-8548 VL - 13 IS - 2 SP - 645 EP - 659 PB - Copernicus CY - Göttingen ER - TY - JOUR A1 - Buchem, Ilona A1 - Okatan, Ebru T1 - Using the Addie Model to Produce MOOCs BT - Experiences from the Oberred Project JF - EMOOCs 2021 N2 - MOOCs have been produced using a variety of instructional design approaches and frameworks. This paper presents experiences from the instructional approach based on the ADDIE model applied to designing and producing MOOCs in the Erasmus+ strategic partnership on Open Badge Ecosystem for Research Data Management (OBERRED). Specifically, this paper describes the case study of the production of the MOOC “Open Badges for Open Science”, delivered on the European MOOC platform EMMA. The key goal of this MOOC is to help learners develop a capacity to use Open Badges in the field of Research Data Management (RDM). To produce the MOOC, the ADDIE model was applied as a generic instructional design model and a systematic approach to the design and development following the five design phases: Analysis, Design, Development, Implementation, Evaluation. This paper outlines the MOOC production including methods, templates and tools used in this process including the interactive micro-content created with H5P in form of Open Educational Resources and digital credentials created with Open Badges and issued to MOOC participants upon successful completion of MOOC levels. The paper also outlines the results from qualitative evaluation, which applied the cognitive walkthrough methodology to elicit user requirements. The paper ends with conclusions about pros and cons of using the ADDIE model in MOOC production and formulates recommendations for further work in this area. Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-517274 SN - 978-3-86956-512-5 VL - 2021 SP - 249 EP - 258 PB - Universitätsverlag Potsdam CY - Potsdam ER - TY - JOUR A1 - Fitzner, Maria A1 - Fricke, Anna A1 - Schreiner, Monika A1 - Baldermann, Susanne T1 - Utilization of regional natural brines for the indoor cultivation of Salicornia europaea JF - Sustainability / Multidisciplinary Digital Publishing Institute (MDPI) N2 - Scaling agriculture to the globally rising population demands new approaches for future crop production such as multilayer and multitrophic indoor farming. Moreover, there is a current trend towards sustainable local solutions for aquaculture and saline agriculture. In this context, halophytes are becoming increasingly important for research and the food industry. As Salicornia europaea is a highly salt-tolerant obligate halophyte that can be used as a food crop, indoor cultivation with saline water is of particular interest. Therefore, finding a sustainable alternative to the use of seawater in non-coastal regions is crucial. Our goal was to determine whether natural brines, which are widely distributed and often available in inland areas, provide an alternative water source for the cultivation of saline organisms. This case study investigated the potential use of natural brines for the production of S. europaea. In the control group, which reflects the optimal growth conditions, fresh weight was increased, but there was no significant difference between the treatment groups comparing natural brines with artificial sea water. A similar pattern was observed for carotenoids and chlorophylls. Individual components showed significant differences. However, within treatments, there were mostly no changes. In summary, we showed that the influence of the different chloride concentrations was higher than the salt composition. Moreover, nutrient-enriched natural brine was demonstrated to be a suitable alternative for cultivation of S. europaea in terms of yield and nutritional quality. Thus, the present study provides the first evidence for the future potential of natural brine waters for the further development of aquaculture systems and saline agriculture in inland regions. KW - carotenoids KW - glasswort KW - land-based aquaculture KW - seawater KW - phytochemicals KW - halophytes KW - salt composition KW - chlorophylls KW - artificial KW - salt KW - saline agriculture Y1 - 2021 U6 - https://doi.org/10.3390/su132112105 SN - 2071-1050 VL - 13 IS - 21 PB - MDPI CY - Basel ER - TY - JOUR A1 - Heissel, Andreas A1 - Sanchez, Alba A1 - Pietrek, Anou F. A1 - Bergau, Theresa A1 - Stielow, Christiane A1 - Rapp, Michael A. A1 - Van der Kaap-Deeder, Jolene T1 - Validating the German Short Basic Psychological Need Satisfaction and Frustration Scale in Individuals with Depression JF - Healthcare N2 - Satisfaction and frustration of the needs for autonomy, competence, and relatedness, as assessed with the 24-item Basic Psychological Need Satisfaction and Frustration Scale (BPNSFS), have been found to be crucial indicators of individuals’ psychological health. To increase the usability of this scale within a clinical and health services research context, we aimed to validate a German short version (12 items) of this scale in individuals with depression including the examination of the relations from need frustration and need satisfaction to ill-being and quality of life (QOL). This cross-sectional study involved 344 adults diagnosed with depression (Mage (SD) = 47.5 years (11.1); 71.8% females). Confirmatory factor analyses indicated that the short version of the BPNSFS was not only reliable, but also fitted a six-factor structure (i.e., satisfaction/frustration X type of need). Subsequent structural equation modeling showed that need frustration related positively to indicators of ill-being and negatively to QOL. Surprisingly, need satisfaction did not predict differences in ill-being or QOL. The short form of the BPNSFS represents a practical instrument to measure need satisfaction and frustration in people with depression. Further, the results support recent evidence on the importance of especially need frustration in the prediction of psychopathology. KW - basic psychological need frustration KW - need satisfaction KW - mental health KW - ill-being KW - depression Y1 - 2023 U6 - https://doi.org/10.3390/healthcare11030412 SN - 2227-9032 VL - 11 IS - 3 PB - MDPI CY - Basel ER - TY - JOUR A1 - Schjeide, Brit-Maren A1 - Schenke, Maren A1 - Seeger, Bettina A1 - Püschel, Gerhard T1 - Validation of a novel double control quantitative copy number PCR method to quantify off-target transgene integration after CRISPR-induced DNA modification JF - Methods and protocols : M&Ps N2 - In order to improve a recently established cell-based assay to assess the potency of botulinum neurotoxin, neuroblastoma-derived SiMa cells and induced pluripotent stem-cells (iPSC) were modified to incorporate the coding sequence of a reporter luciferase into a genetic safe harbor utilizing CRISPR/Cas9. A novel method, the double-control quantitative copy number PCR (dc-qcnPCR), was developed to detect off-target integrations of donor DNA. The donor DNA insertion success rate and targeted insertion success rate were analyzed in clones of each cell type. The dc-qcnPCR reliably quantified the copy number in both cell lines. The probability of incorrect donor DNA integration was significantly increased in SiMa cells in comparison to the iPSCs. This can possibly be explained by the lower bundled relative gene expression of a number of double-strand repair genes (BRCA1, DNA2, EXO1, MCPH1, MRE11, and RAD51) in SiMa clones than in iPSC clones. The dc-qcnPCR offers an efficient and cost-effective method to detect off-target CRISPR/Cas9-induced donor DNA integrations. KW - CRISPR editing validation KW - copy number analyses KW - homology-directed repair KW - homologous recombination deficiency Y1 - 2022 U6 - https://doi.org/10.3390/mps5030043 SN - 2409-9279 VL - 5 IS - 3 SP - 1 EP - 14 PB - MDPI CY - Basel, Schweiz ER - TY - JOUR A1 - Rezori, Roman Enzio von A1 - Buchallik, Friederike A1 - Warschburger, Petra T1 - Validation of the German Benefit Finding Scale for youth with chronic conditions JF - Child and adolescent psychiatry and mental health N2 - Background Benefit finding, defined as perceiving positive life changes resulting from adversity and negative life stressors, gains growing attention in the context of chronic illness. The study aimed at examining the psychometric properties of the Benefit Finding Scale for Children (BFSC) in a sample of German youth facing chronic conditions. Methods A sample of adolescents with various chronic conditions (N = 304; 12 – 21years) completed the 10-item BFSC along with measures of intra- and interpersonal resources, coping strategies, and health-related quality of life (hrQoL). The total sample was randomly divided into two subsamples for conducting exploratory and confirmatory factor analyses (EFA/CFA). Results EFA revealed that the BFSC scores had a one-dimensional factor structure. CFA verified the one-dimensional factor structure with an acceptable fit. The BFSC exhibited acceptable internal consistency (α = 0.87 – 0.88) and construct validity. In line with our hypotheses, benefit finding was positively correlated with optimism, self-esteem, self-efficacy, sense of coherence, and support seeking. There were no correlations with avoidance, wishful thinking, emotional reaction, and hrQoL. Sex differences in benefit finding were not consistent across subsamples. Benefit finding was also positively associated with age, disease severity, and social status. Conclusions The BFSC is a psychometrically sound instrument to assess benefit finding in adolescents with chronic illness and may facilitate further research on positive adaptation processes in adolescents, irrespective of their specific diagnosis. KW - Measure validation KW - Chronic conditions KW - Resilience KW - Coping skills and adjustment KW - Youth Y1 - 2022 U6 - https://doi.org/10.1186/s13034-021-00438-7 SN - 1753-2000 VL - 16 SP - 1 EP - 8 PB - Biomed Central CY - London ER -