TY  - JOUR
A1  - Selsing, Jonatan
A1  - Malesani, D.
A1  - Goldoni, P.
A1  - Fynbo, Johan
A1  - Krühler, T.
A1  - Antonelli, L. A.
A1  - Arabsalmani, M.
A1  - Bolmer, J.
A1  - Cano, Z.
A1  - Christensen, L.
A1  - Covino, S.
A1  - De Cia, A.
A1  - de Ugarte Postigo, A.
A1  - Flores, H.
A1  - Fliis, M.
A1  - Gomboc, A.
A1  - Greiner, J.
A1  - Groot, P.
A1  - Hammer, F.
A1  - Hartoog, O. E.
A1  - Heintz, K. E.
A1  - Hjorth, J.
A1  - Jakobsson, P.
A1  - Japelj, J.
A1  - Kann, D. A.
A1  - Kaper, L.
A1  - Ledoux, C.
A1  - Leloudas, G.
A1  - Levan, A. J.
A1  - Maiorano, E.
A1  - Melandri, A.
A1  - Milvang-Jensen, B.
A1  - Palazzi, E.
A1  - Palmerio, J. T.
A1  - Perley, D. A.
A1  - Pian, E.
A1  - Piranomonte, S.
A1  - Pugliese, G.
A1  - Sanchez-Ramirez, R.
A1  - Savaglio, S.
A1  - Schady, P.
A1  - Schulze, S.
A1  - Sollerman, J.
A1  - Sparre, Martin
A1  - Tagliaferri, G.
A1  - Tanvir, N. R.
A1  - Thone, C. C.
A1  - Vergani, S. D.
A1  - Vreeswijk, P.
A1  - Watson, D.
A1  - Wiersema, K.
A1  - Wijers, R.
A1  - Xu, D.
A1  - Zafar, T.
T1  - The X-shooter GRB afterglow legacy sample (XS-GRB)
JF  - Astronomy and astrophysics : an international weekly journal
N2  - In this work we present spectra of all gamma-ray burst (GRB) afterglows that have been promptly observed with the X-shooter spectrograph until 31/03/2017. In total, we have obtained spectroscopic observations of 103 individual GRBs observed within 48 hours of the GRB trigger. Redshifts have been measured for 97 per cent of these, covering a redshift range from 0.059 to 7.84. Based on a set of observational selection criteria that minimise biases with regards to intrinsic properties of the GRBs, the follow-up effort has been focused on producing a homogeneously selected sample of 93 afterglow spectra for GRBs discovered by the Swift satellite. We here provide a public release of all the reduced spectra, including continuum estimates and telluric absorption corrections. For completeness, we also provide reductions for the 18 late-time observations of the underlying host galaxies. We provide an assessment of the degree of completeness with respect to the parent GRB population, in terms of the X-ray properties of the bursts in the sample and find that the sample presented here is representative of the full Swift sample. We have constrained the fraction of dark bursts to be <28 per cent and confirm previous results that higher optical darkness is correlated with increased X-ray absorption. For the 42 bursts for which it is possible, we have provided a measurement of the neutral hydrogen column density, increasing the total number of published HI column density measurements by similar to 33 per cent. This dataset provides a unique resource to study the ISM across cosmic time, from the local progenitor surroundings to the intervening Universe.
KW  - gamma-ray burst: general
KW  - galaxies: high-redshift
KW  - ISM: general
KW  - techniques: spectroscopic
KW  - catalogs
KW  - galaxies: star formation
Y1  - 2019
U6  - https://doi.org/10.1051/0004-6361/201832835
SN  - 1432-0746
SN  - 0004-6361
VL  - 623
PB  - EDP Sciences
CY  - Les Ulis
ER  - 
TY  - JOUR
A1  - Thomas, Jessica E.
A1  - Carvalho, Gary R.
A1  - Haile, James
A1  - Rawlence, Nicolas J.
A1  - Martin, Michael D.
A1  - Ho, Simon Y. W.
A1  - Sigfusson, Arnor P.
A1  - Josefsson, Vigfus A.
A1  - Frederiksen, Morten
A1  - Linnebjerg, Jannie F.
A1  - Castruita, Jose A. Samaniego
A1  - Niemann, Jonas
A1  - Sinding, Mikkel-Holger S.
A1  - Sandoval-Velasco, Marcela
A1  - Soares, Andre E. R.
A1  - Lacy, Robert
A1  - Barilaro, Christina
A1  - Best, Juila
A1  - Brandis, Dirk
A1  - Cavallo, Chiara
A1  - Elorza, Mikelo
A1  - Garrett, Kimball L.
A1  - Groot, Maaike
A1  - Johansson, Friederike
A1  - Lifjeld, Jan T.
A1  - Nilson, Goran
A1  - Serjeanston, Dale
A1  - Sweet, Paul
A1  - Fuller, Errol
A1  - Hufthammer, Anne Karin
A1  - Meldgaard, Morten
A1  - Fjeldsa, Jon
A1  - Shapiro, Beth
A1  - Hofreiter, Michael
A1  - Stewart, John R.
A1  - Gilbert, M. Thomas P.
A1  - Knapp, Michael
T1  - Demographic reconstruction from ancient DNA supports rapid extinction of the great auk
JF  - eLife
N2  - The great auk was once abundant and distributed across the North Atlantic. It is now extinct, having been heavily exploited for its eggs, meat, and feathers. We investigated the impact of human hunting on its demise by integrating genetic data, GPS-based ocean current data, and analyses of population viability. We sequenced complete mitochondrial genomes of 41 individuals from across the species' geographic range and reconstructed population structure and population dynamics throughout the Holocene. Taken together, our data do not provide any evidence that great auks were at risk of extinction prior to the onset of intensive human hunting in the early 16th century. In addition, our population viability analyses reveal that even if the great auk had not been under threat by environmental change, human hunting alone could have been sufficient to cause its extinction. Our results emphasise the vulnerability of even abundant and widespread species to intense and localised exploitation.
Y1  - 2019
U6  - https://doi.org/10.7554/eLife.47509
SN  - 2050-084X
VL  - 8
PB  - eLife Sciences Publications
CY  - Cambridge
ER  - 
TY  - JOUR
A1  - Kunnus, Kristjan
A1  - Josefsson, I.
A1  - Schreck, Simon Frederik
A1  - Quevedo, W.
A1  - Miedema, P. S.
A1  - Techert, S.
A1  - de Groot, F. M. F.
A1  - Föhlisch, Alexander
A1  - Odelius, M.
A1  - Wernet, Ph.
T1  - Quantifying covalent interactions with resonant inelastic soft X-ray scattering
BT  - case study of Ni2+ aqua complex
JF  - Chemical physics letters
N2  - We analyze the effects of covalent interactions in Ni 2p3d resonant inelastic X-ray scattering (RIXS) spectra from aqueous Ni2+ ions and find that the relative RIXS intensities of ligand-to-metal charge-transfer final states with respect to the ligand-field final states reflect the covalent mixing between Ni 3d and water orbitals. Specifically, the experimental intensity ratio at the Ni L-3-edge allows to determine that the Ni 3d orbitals have on average 5.5% of water character. We propose that 2p3d RIXS at the Ni L-3-edge can be utilized to quantify covalency in Ni complexes without the use of external references or simulations.
KW  - Transition-metal ion
KW  - Aqueous solution
KW  - Covalent interaction
KW  - Resonant inelastic X-ray scattering
KW  - Ligand-field state
KW  - Charge-transfer state
Y1  - 2016
U6  - https://doi.org/10.1016/j.cplett.2016.12.046
SN  - 0009-2614
SN  - 1873-4448
VL  - 669
SP  - 196
EP  - 201
PB  - Elsevier
CY  - Amsterdam
ER  - 
TY  - INPR
A1  - Föhlisch, Alexander
A1  - de Groot, F. M. F.
A1  - Odelius, Michael
A1  - Techert, Simone
A1  - Wernet, P.
T1  - Comment on "state-dependent electron delocalization dynamics at the solute-solvent interface: soft-x-ray absorption spectroscopy and lambda b initio calculations"
T2  - Physical review letters
Y1  - 2014
U6  - https://doi.org/10.1103/PhysRevLett.112.129302
SN  - 0031-9007
SN  - 1079-7114
VL  - 112
IS  - 12
PB  - American Physical Society
CY  - College Park
ER  - 
TY  - JOUR
A1  - Mitzner, Rolf
A1  - Rehanek, Jens
A1  - Kern, Jan
A1  - Gul, Sheraz
A1  - Hattne, Johan
A1  - Taguchi, Taketo
A1  - Alonso-Mori, Roberto
A1  - Tran, Rosalie
A1  - Weniger, Christian
A1  - Schröder, Henning
A1  - Quevedo, Wilson
A1  - Laksmono, Hartawan
A1  - Sierra, Raymond G.
A1  - Han, Guangye
A1  - Lassalle-Kaiser, Benedikt
A1  - Koroidov, Sergey
A1  - Kubicek, Katharina
A1  - Schreck, Simon
A1  - Kunnus, Kristjan
A1  - Brzhezinskaya, Maria
A1  - Firsov, Alexander
A1  - Minitti, Michael P.
A1  - Turner, Joshua J.
A1  - Möller, Stefan
A1  - Sauter, Nicholas K.
A1  - Bogan, Michael J.
A1  - Nordlund, Dennis
A1  - Schlotter, William F.
A1  - Messinger, Johannes
A1  - Borovik, Andrew S.
A1  - Techert, Simone
A1  - de Groot, Frank M. F.
A1  - Föhlisch, Alexander
A1  - Erko, Alexei
A1  - Bergmann, Uwe
A1  - Yachandra, Vittal K.
A1  - Wernet, Philippe
A1  - Yano, Junko
T1  - L-edge x-ray absorption spectroscopy of dilute systems relevant to metalloproteins using an X-ray free-electron laser
JF  - The journal of physical chemistry letters
N2  - L-edge spectroscopy of 3d transition metals provides important electronic structure information and has been used in many fields. However, the use of this method for studying dilute aqueous systems, such as metalloenzymes, has not been prevalent because of severe radiation damage and the lack of suitable detection systems. Here we present spectra from a dilute Mn aqueous solution using a high-transmission zone-plate spectrometer at the Linac Coherent Light Source (LCLS). The spectrometer has been optimized for discriminating the Mn L-edge signal from the overwhelming 0 K-edge background that arises from water and protein itself, and the ultrashort LCLS X-ray pulses can outrun X-ray induced damage. We show that the deviations of the partial-fluorescence yield-detected spectra from the true absorption can be well modeled using the state-dependence of the fluorescence yield, and discuss implications for the application of our concept to biological samples.
Y1  - 2013
U6  - https://doi.org/10.1021/jz401837f
SN  - 1948-7185
VL  - 4
IS  - 21
SP  - 3641
EP  - 3647
PB  - American Chemical Society
CY  - Washington
ER  -