TY - JOUR A1 - Enssle, Jörg A1 - Weylandt, Karsten-Henrich T1 - Secure and optimized detection of PNPLA3 rs738409 genotype by an improved PCR-restriction fragment length polymorphism method JF - BioTechniques : the international journal of life science methods N2 - The PNPLA3 reference single-nucleotide polymorphism rs738409 has been identified as a predisposing factor for nonalcoholic fatty liver disease. A simple method based on PCR and restriction fragment length polymorphism (RFLP) analysis had been published to detect the nonpathogenic allele PNPLA3 rs738409 variant. The presence of the pathogenic variant was deduced by the indigestibility of the corresponding PCR product with BtsCI recognizing the nonpathogenic allele. However, one cannot exclude that an enzymatic reaction does not occur for other, more trivial, reasons. For safe and secure detection of the pathogenic PNPLA3 rs738409, we have further developed the PCR-restriction fragment length polymorphism method by adding a second restriction enzyme digest, clearly identifying the correct PNPLA3 alleles and in particular the pathogenic variant.
METHOD SUMMARY
The method presented here represents an improved genetic diagnosis of the PNPLA3 rs738409 alleles based on conventional and inexpensive molecular biological methods. We used methodology based on PCR and restriction fragment length polymorphisms and clearly identified both described alleles by the use of two restriction enzymes. Digestion of individuals' specific PNPLA3 PCR fragments with both enzymes in independent reactions clearly showed the PNPLA3 rs738409 genotype. KW - n-3 polyunsaturated fatty acid therapies KW - nonalcoholic fatty liver KW - disease KW - PCR– RFLP KW - PNPLA3 KW - rs738409 Y1 - 2021 U6 - https://doi.org/10.2144/btn-2020-0163 SN - 0736-6205 SN - 1940-9818 VL - 70 IS - 6 SP - 345 EP - 349 PB - Future Science Ltd. CY - London ER - TY - JOUR A1 - Wang, Chaoxuan A1 - Enssle, Jörg A1 - Pietzner, Anne A1 - Schmöcker, Christoph A1 - Weiland, Linda A1 - Ritter, Oliver A1 - Jaensch, Monique A1 - Elbelt, Ulf A1 - Pagonas, Nikolaos A1 - Weylandt, Karsten-Henrich T1 - Essential polyunsaturated fatty acids in blood from patients with and without catheter-proven coronary artery disease JF - International journal of molecular sciences N2 - Coronary artery disease (CAD) is the leading cause of death worldwide. Statins reduce morbidity and mortality of CAD. Intake of n-3 polyunsaturated fatty acid (n-3 PUFAs), particularly eicosapentaenoic acid (EPA), is associated with reduced morbidity and mortality in patients with CAD. Previous data indicate that a higher conversion of precursor fatty acids (FAs) to arachidonic acid (AA) is associated with increased CAD prevalence. Our study explored the FA composition in blood to assess n-3 PUFA levels from patients with and without CAD. We analyzed blood samples from 273 patients undergoing cardiac catheterization. Patients were stratified according to clinically relevant CAD (n = 192) and those without (n = 81). FA analysis in full blood was performed by gas chromatography. Indicating increased formation of AA from precursors, the ratio of dihomo-gamma-linolenic acid (DGLA) to AA, the delta-5 desaturase index (D5D index) was higher in CAD patients. CAD patients had significantly lower levels of omega-6 polyunsaturated FAs (n-6 PUFA) and n-3 PUFA, particularly EPA, in the blood. Thus, our study supports a role of increased EPA levels for cardioprotection. KW - coronary artery disease KW - triglycerides KW - polyunsaturated fatty acids KW - n-3 PUFA KW - statins KW - arachidonic acid Y1 - 2022 U6 - https://doi.org/10.3390/ijms23020766 SN - 1422-0067 SN - 1661-6596 VL - 23 IS - 2 PB - Molecular Diversity Preservation International CY - Basel ER -