TY - JOUR A1 - Kubas, Daniel A1 - Cassan, A. A1 - Beaulieu, Jean-Philippe A1 - Coutures, C. A1 - Dominik, M. A1 - Albrow, Michael D. A1 - Brillant, Stephane A1 - Caldwell, John A. R. A1 - Dominis, Dijana A1 - Donatowicz, J. A1 - Fendt, Christian A1 - Fouque, P. A1 - Jorgensen, Uffe Grae A1 - Greenhill, John A1 - Hill, K. A1 - Heinmüller, Janine A1 - Horne, Keith A1 - Kane, Stephen R. A1 - Marquette, Jean-Baptiste A1 - Martin, Ralph A1 - Menzies, J. W. A1 - Pollard, K. R. A1 - Sahu, K. C. A1 - Vinter, C. A1 - Wambsganss, Joachim A1 - Watson, R. A1 - Williams, A. A1 - Thurl, C. T1 - Full characterization of binary-lens event OGLE-2002-BLG-069 from PLANET observations N2 - We analyze the photometric data obtained by PLANET and OGLE on the caustic-crossing binary-lens microlensing event OGLE-2002-BLG-069. Thanks to the excellent photometric and spectroscopic coverage of the event, we are able to constrain the lens model up to the known ambiguity between close and wide binary lenses. The detection of annual parallax in combination with measurements of extended-source effects allows us to determine the mass, distance and velocity of the lens components for the competing models. While the model involving a close binary lens leads to a Bulge- Disc lens scenario with a lens mass of M = (0.51 ± 0.15) M-⊙ and distance of D-L = (2.9 ± 0.4) kpc, the wide binary lens solution requires a rather implausible binary black-hole lens ( M ≳ 126 M-⊙). Furthermore we compare current state-of-the-art numerical and empirical models for the surface brightness profile of the source, a G5III Bulge giant. We find that a linear limb-darkening model for the atmosphere of the source star is consistent with the data whereas a PHOENIX atmosphere model assuming LTE and with no free parameter does not match our observations Y1 - 2005 SN - 0004-6361 ER - TY - JOUR A1 - Cassan, A. A1 - Beaulieu, Jean-Philippe A1 - Brillant, Stephane A1 - Coutures, C. A1 - Dominik, M. A1 - Donatowicz, J. A1 - Jorgensen, Uffe Grae A1 - Kubas, Daniel A1 - Albrow, Michael D. A1 - Caldwell, John A. R. A1 - Fouque, P. A1 - Greenhill, John A1 - Hill, K. A1 - Horne, Keith A1 - Kane, Stephen R. A1 - Martin, Ralph A1 - Menzies, J. W. A1 - Pollard, K. R. A1 - Sahu, K. C. A1 - Vinter, C. A1 - Wambsganss, Joachim A1 - Watson, R. A1 - Williams, A. A1 - Fendt, Christian A1 - Hauschildt, P. A1 - Heinmueller, Janine A1 - Marquette, Jean-Baptiste A1 - Thurl, C. T1 - Probing the atmosphere of the bulge G5III star OGLE-2002-BUL-069 by analysis of microlensed H alpha line N2 - We discuss high-resolution, time-resolved spectra of the caustic exit of the binary microlensing event OGLE 2002-BLG-069 obtained with UVES on the VLT. The source star is a G5III giant in the Galactic Bulge. During such events, the source star is highly magnified, and a strong differential magnification around the caustic resolves its surface. Using an appropriate model stellar atmosphere generated by the PHOENIX v2.6 code we obtain a model light curve for the caustic exit and compare it with a dense set of photometric observations obtained by the PLANET microlensing follow up network. We further compare predicted variations in the Halpha equivalent width with those measured from our spectra. While the model and observations agree in the gross features, there are discrepancies suggesting shortcomings in the model, particularly for the Halpha line core, where we have detected amplified emission from the stellar chromosphere after the source star's trailing limb exited the caustic. This achievement became possible by the provision of the very efficient OGLE-III Early Warning System, a network of small telescopes capable of nearly-continuous round-the-clock photometric monitoring, on-line data reduction, daily near-real-time modelling in order to predict caustic crossing parameters, and a fast and efficient response of a 8 m class telescope to a "Target-of-Opportunity" observation request Y1 - 2004 ER - TY - JOUR A1 - Treat, Claire C. A1 - Kleinen, Thomas A1 - Broothaerts, Nils A1 - Dalton, April S. A1 - Dommain, Rene A1 - Douglas, Thomas A. A1 - Drexler, Judith Z. A1 - Finkelstein, Sarah A. A1 - Grosse, Guido A1 - Hope, Geoffrey A1 - Hutchings, Jack A1 - Jones, Miriam C. A1 - Kuhry, Peter A1 - Lacourse, Terri A1 - Lahteenoja, Outi A1 - Loisel, Julie A1 - Notebaert, Bastiaan A1 - Payne, Richard J. A1 - Peteet, Dorothy M. A1 - Sannel, A. Britta K. A1 - Stelling, Jonathan M. A1 - Strauss, Jens A1 - Swindles, Graeme T. A1 - Talbot, Julie A1 - Tarnocai, Charles A1 - Verstraeten, Gert A1 - Williams, Christopher J. A1 - Xia, Zhengyu A1 - Yu, Zicheng A1 - Valiranta, Minna A1 - Hattestrand, Martina A1 - Alexanderson, Helena A1 - Brovkin, Victor T1 - Widespread global peatland establishment and persistence over the last 130,000 y JF - Proceedings of the National Academy of Sciences of the United States of America N2 - Glacial-interglacial variations in CO2 and methane in polar ice cores have been attributed, in part, to changes in global wetland extent, but the wetland distribution before the Last Glacial Maximum (LGM, 21 ka to 18 ka) remains virtually unknown. We present a study of global peatland extent and carbon (C) stocks through the last glacial cycle (130 ka to present) using a newly compiled database of 1,063 detailed stratigraphic records of peat deposits buried by mineral sediments, as well as a global peatland model. Quantitative agreement between modeling and observations shows extensive peat accumulation before the LGM in northern latitudes (> 40 degrees N), particularly during warmer periods including the last interglacial (130 ka to 116 ka, MIS 5e) and the interstadial (57 ka to 29 ka, MIS 3). During cooling periods of glacial advance and permafrost formation, the burial of northern peatlands by glaciers and mineral sediments decreased active peatland extent, thickness, and modeled C stocks by 70 to 90% from warmer times. Tropical peatland extent and C stocks show little temporal variation throughout the study period. While the increased burial of northern peats was correlated with cooling periods, the burial of tropical peat was predominately driven by changes in sea level and regional hydrology. Peat burial by mineral sediments represents a mechanism for long-term terrestrial C storage in the Earth system. These results show that northern peatlands accumulate significant C stocks during warmer times, indicating their potential for C sequestration during the warming Anthropocene. KW - peatlands KW - carbon KW - methane KW - carbon burial KW - Quaternary Y1 - 2019 U6 - https://doi.org/10.1073/pnas.1813305116 SN - 0027-8424 VL - 116 IS - 11 SP - 4822 EP - 4827 PB - National Acad. of Sciences CY - Washington ER - TY - JOUR A1 - Todt, Helge Tobias A1 - Kniazev, A. Y. A1 - Gvaramadze, V. V. A1 - Hamann, Wolf-Rainer A1 - Buckley, D. A1 - Crause, L. A1 - Crawford, S. M. A1 - Gulbis, A. A. S. A1 - Hettlage, C. A1 - Hooper, E. A1 - Husser, T. -O. A1 - Kotze, P. A1 - Loaring, N. A1 - Nordsieck, K. H. A1 - O'Donoghue, D. A1 - Pickering, T. A1 - Potter, S. A1 - Romero-Colmenero, E. A1 - Vaisanen, P. A1 - Williams, T. A1 - Wolf, M. T1 - Abell 48-a rare WN-type central star of a planetary nebula JF - Monthly notices of the Royal Astronomical Society N2 - A considerable fraction of the central stars of planetary nebulae (CSPNe) are hydrogen-deficient. Almost all of these H-deficient central stars (CSs) display spectra with strong carbon and helium lines. Most of them exhibit emission-line spectra resembling those of massive WC stars. Therefore these stars are classed as CSPNe of spectral type [WC]. Recently, quantitative spectral analysis of two emission-line CSs, PB 8 and IC 4663, revealed that these stars do not belong to the [WC] class. Instead PB 8 has been classified as [WN/WC] type and IC 4663 as [WN] type. In this work we report the spectroscopic identification of another rare [WN] star, the CS of Abell 48. We performed a spectral analysis of Abell 48 with the Potsdam Wolf-Rayet (PoWR) models for expanding atmospheres. We find that the expanding atmosphere of Abell 48 is mainly composed of helium (85 per cent by mass), hydrogen (10 per cent) and nitrogen (5 per cent). The residual hydrogen and the enhanced nitrogen abundance make this object different from the other [WN] star IC 4663. We discuss the possible origin of this atmospheric composition. KW - stars: abundances KW - stars: AGB and post-AGB KW - stars: mass-loss KW - stars: Wolf-Rayet KW - planetary nebulae: general KW - planetary nebulae: individual: PN G029.0+00.4 Y1 - 2013 U6 - https://doi.org/10.1093/mnras/stt056 SN - 0035-8711 SN - 1365-2966 VL - 430 IS - 3 SP - 2302 EP - 2312 PB - Oxford Univ. Press CY - Oxford ER - TY - JOUR A1 - Sackett, Penny D. A1 - Albrow, Michael D. A1 - Beaulieu, Jean-Philippe A1 - Caldwell, John A. R. A1 - Coutures, C. A1 - Dominik, M. A1 - Greenhill, John A1 - Hill, K. A1 - Horne, Keith A1 - Jorgensen, Uffe Grae A1 - Kane, Stephen R. A1 - Kubas, Daniel A1 - Martin, Ralph A1 - Menzies, J. W. A1 - Pollard, K. R. A1 - Sahu, K. C. A1 - Wambsganß, Joachim A1 - Watson, R. A1 - Williams, A. T1 - PLANET II : a microlensing and transit search for extrasolar planets N2 - Due to their extremely small luminosity compared to the stars they orbit, planets outside our own Solar System are extraordinarily difficult to detect directly in optical light. Careful photometric monitoring of distant stars, however, can reveal the presence of exoplanets via the microlensing or eclipsing effects they induce. The international PLANET collaboration is performing such monitoring using a cadre of semi-dedicated telescopes around the world. Their results constrain the number of gas giants orbiting 1-7 AU from the most typical stars in the Galaxy. Upgrades in the program are opening regions of ''exoplanet discovery space'' - toward smaller masses and larger orbital radii - that are inaccessible to the Doppler velocity technique. Y1 - 2003 UR - http://arxiv.org/pdf/astro-ph/0211098 ER - TY - JOUR A1 - Furniss, Amy A1 - Worseck, Gabor A1 - Fumagalli, Michele A1 - Johnson, Caitlin A. A1 - Williams, David A. A1 - Pontrelli, P. A1 - Prochaska, J. Xavier T1 - Spectroscopic Redshift of the Gamma-Ray Blazar B2 1215+30 from Ly alpha Emission JF - The astronomical journal N2 - We report on Cosmic Origin Spectrograph observations of the gamma-ray bright blazar B2 1215+30, collected in 2015 November. These observations allow for the confirmation of the source redshift from the detection of a Lyα emission feature at λ ~ 1374 Å. The emission feature places the source at a redshift of z = 0.1305 ± 0.003, confirming the source's ground-based spectral measurement. The gamma-ray emission of the source is discussed in the context of the source distance, required for the accurate reconstruction of the intrinsic gamma-ray emission taking the absorption by the extragalactic background light into account. The source distance is found to be low enough that the previously reported detection of an exceptional flaring event from B2 1215+30 in 2014 cannot be used to investigate opacity-specific spectral and variability characteristics introduced by possible ultra-high-energy cosmic-ray propagation. KW - galaxies:distances and redshifts KW - galaxies: individual (B2 1215+30) KW - gamma rays: galaxies KW - ultraviolet: galaxies Y1 - 2019 U6 - https://doi.org/10.3847/1538-3881/aaf28b SN - 0004-6256 SN - 1538-3881 VL - 157 IS - 2 PB - IOP Publ. Ltd. CY - Bristol ER - TY - JOUR A1 - Chipman, Ariel D. A1 - Ferrier, David E. K. A1 - Brena, Carlo A1 - Qu, Jiaxin A1 - Hughes, Daniel S. T. A1 - Schroeder, Reinhard A1 - Torres-Oliva, Montserrat A1 - Znassi, Nadia A1 - Jiang, Huaiyang A1 - Almeida, Francisca C. A1 - Alonso, Claudio R. A1 - Apostolou, Zivkos A1 - Aqrawi, Peshtewani A1 - Arthur, Wallace A1 - Barna, Jennifer C. J. A1 - Blankenburg, Kerstin P. A1 - Brites, Daniela A1 - Capella-Gutierrez, Salvador A1 - Coyle, Marcus A1 - Dearden, Peter K. A1 - Du Pasquier, Louis A1 - Duncan, Elizabeth J. A1 - Ebert, Dieter A1 - Eibner, Cornelius A1 - Erikson, Galina A1 - Evans, Peter D. A1 - Extavour, Cassandra G. A1 - Francisco, Liezl A1 - Gabaldon, Toni A1 - Gillis, William J. A1 - Goodwin-Horn, Elizabeth A. A1 - Green, Jack E. A1 - Griffiths-Jones, Sam A1 - Grimmelikhuijzen, Cornelis J. P. A1 - Gubbala, Sai A1 - Guigo, Roderic A1 - Han, Yi A1 - Hauser, Frank A1 - Havlak, Paul A1 - Hayden, Luke A1 - Helbing, Sophie A1 - Holder, Michael A1 - Hui, Jerome H. L. A1 - Hunn, Julia P. A1 - Hunnekuhl, Vera S. A1 - Jackson, LaRonda A1 - Javaid, Mehwish A1 - Jhangiani, Shalini N. A1 - Jiggins, Francis M. A1 - Jones, Tamsin E. A1 - Kaiser, Tobias S. A1 - Kalra, Divya A1 - Kenny, Nathan J. A1 - Korchina, Viktoriya A1 - Kovar, Christie L. A1 - Kraus, F. Bernhard A1 - Lapraz, Francois A1 - Lee, Sandra L. A1 - Lv, Jie A1 - Mandapat, Christigale A1 - Manning, Gerard A1 - Mariotti, Marco A1 - Mata, Robert A1 - Mathew, Tittu A1 - Neumann, Tobias A1 - Newsham, Irene A1 - Ngo, Dinh N. A1 - Ninova, Maria A1 - Okwuonu, Geoffrey A1 - Ongeri, Fiona A1 - Palmer, William J. A1 - Patil, Shobha A1 - Patraquim, Pedro A1 - Pham, Christopher A1 - Pu, Ling-Ling A1 - Putman, Nicholas H. A1 - Rabouille, Catherine A1 - Ramos, Olivia Mendivil A1 - Rhodes, Adelaide C. A1 - Robertson, Helen E. A1 - Robertson, Hugh M. A1 - Ronshaugen, Matthew A1 - Rozas, Julio A1 - Saada, Nehad A1 - Sanchez-Gracia, Alejandro A1 - Scherer, Steven E. A1 - Schurko, Andrew M. A1 - Siggens, Kenneth W. A1 - Simmons, DeNard A1 - Stief, Anna A1 - Stolle, Eckart A1 - Telford, Maximilian J. A1 - Tessmar-Raible, Kristin A1 - Thornton, Rebecca A1 - van der Zee, Maurijn A1 - von Haeseler, Arndt A1 - Williams, James M. A1 - Willis, Judith H. A1 - Wu, Yuanqing A1 - Zou, Xiaoyan A1 - Lawson, Daniel A1 - Muzny, Donna M. A1 - Worley, Kim C. A1 - Gibbs, Richard A. A1 - Akam, Michael A1 - Richards, Stephen T1 - The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima JF - PLoS biology N2 - Myriapods (e. g., centipedes and millipedes) display a simple homonomous body plan relative to other arthropods. All members of the class are terrestrial, but they attained terrestriality independently of insects. Myriapoda is the only arthropod class not represented by a sequenced genome. We present an analysis of the genome of the centipede Strigamia maritima. It retains a compact genome that has undergone less gene loss and shuffling than previously sequenced arthropods, and many orthologues of genes conserved from the bilaterian ancestor that have been lost in insects. Our analysis locates many genes in conserved macro-synteny contexts, and many small-scale examples of gene clustering. We describe several examples where S. maritima shows different solutions from insects to similar problems. The insect olfactory receptor gene family is absent from S. maritima, and olfaction in air is likely effected by expansion of other receptor gene families. For some genes S. maritima has evolved paralogues to generate coding sequence diversity, where insects use alternate splicing. This is most striking for the Dscam gene, which in Drosophila generates more than 100,000 alternate splice forms, but in S. maritima is encoded by over 100 paralogues. We see an intriguing linkage between the absence of any known photosensory proteins in a blind organism and the additional absence of canonical circadian clock genes. The phylogenetic position of myriapods allows us to identify where in arthropod phylogeny several particular molecular mechanisms and traits emerged. For example, we conclude that juvenile hormone signalling evolved with the emergence of the exoskeleton in the arthropods and that RR-1 containing cuticle proteins evolved in the lineage leading to Mandibulata. We also identify when various gene expansions and losses occurred. The genome of S. maritima offers us a unique glimpse into the ancestral arthropod genome, while also displaying many adaptations to its specific life history. Y1 - 2014 U6 - https://doi.org/10.1371/journal.pbio.1002005 SN - 1545-7885 VL - 12 IS - 11 PB - PLoS CY - San Fransisco ER - TY - JOUR A1 - Read, Betsy A. A1 - Kegel, Jessica A1 - Klute, Mary J. A1 - Kuo, Alan A1 - Lefebvre, Stephane C. A1 - Maumus, Florian A1 - Mayer, Christoph A1 - Miller, John A1 - Monier, Adam A1 - Salamov, Asaf A1 - Young, Jeremy A1 - Aguilar, Maria A1 - Claverie, Jean-Michel A1 - Frickenhaus, Stephan A1 - Gonzalez, Karina A1 - Herman, Emily K. A1 - Lin, Yao-Cheng A1 - Napier, Johnathan A1 - Ogata, Hiroyuki A1 - Sarno, Analissa F. A1 - Shmutz, Jeremy A1 - Schroeder, Declan A1 - de Vargas, Colomban A1 - Verret, Frederic A1 - von Dassow, Peter A1 - Valentin, Klaus A1 - Van de Peer, Yves A1 - Wheeler, Glen A1 - Dacks, Joel B. A1 - Delwiche, Charles F. A1 - Dyhrman, Sonya T. A1 - Glöckner, Gernot A1 - John, Uwe A1 - Richards, Thomas A1 - Worden, Alexandra Z. A1 - Zhang, Xiaoyu A1 - Grigoriev, Igor V. A1 - Allen, Andrew E. A1 - Bidle, Kay A1 - Borodovsky, M. A1 - Bowler, C. A1 - Brownlee, Colin A1 - Cock, J. Mark A1 - Elias, Marek A1 - Gladyshev, Vadim N. A1 - Groth, Marco A1 - Guda, Chittibabu A1 - Hadaegh, Ahmad A1 - Iglesias-Rodriguez, Maria Debora A1 - Jenkins, J. A1 - Jones, Bethan M. A1 - Lawson, Tracy A1 - Leese, Florian A1 - Lindquist, Erika A1 - Lobanov, Alexei A1 - Lomsadze, Alexandre A1 - Malik, Shehre-Banoo A1 - Marsh, Mary E. A1 - Mackinder, Luke A1 - Mock, Thomas A1 - Müller-Röber, Bernd A1 - Pagarete, Antonio A1 - Parker, Micaela A1 - Probert, Ian A1 - Quesneville, Hadi A1 - Raines, Christine A1 - Rensing, Stefan A. A1 - Riano-Pachon, Diego Mauricio A1 - Richier, Sophie A1 - Rokitta, Sebastian A1 - Shiraiwa, Yoshihiro A1 - Soanes, Darren M. A1 - van der Giezen, Mark A1 - Wahlund, Thomas M. A1 - Williams, Bryony A1 - Wilson, Willie A1 - Wolfe, Gordon A1 - Wurch, Louie L. T1 - Pan genome of the phytoplankton Emiliania underpins its global distribution JF - Nature : the international weekly journal of science N2 - Coccolithophores have influenced the global climate for over 200 million years(1). These marine phytoplankton can account for 20 per cent of total carbon fixation in some systems(2). They form blooms that can occupy hundreds of thousands of square kilometres and are distinguished by their elegantly sculpted calcium carbonate exoskeletons (coccoliths), rendering them visible from space(3). Although coccolithophores export carbon in the form of organic matter and calcite to the sea floor, they also release CO2 in the calcification process. Hence, they have a complex influence on the carbon cycle, driving either CO2 production or uptake, sequestration and export to the deep ocean(4). Here we report the first haptophyte reference genome, from the coccolithophore Emiliania huxleyi strain CCMP1516, and sequences from 13 additional isolates. Our analyses reveal a pan genome (core genes plus genes distributed variably between strains) probably supported by an atypical complement of repetitive sequence in the genome. Comparisons across strains demonstrate that E. huxleyi, which has long been considered a single species, harbours extensive genome variability reflected in different metabolic repertoires. Genome variability within this species complex seems to underpin its capacity both to thrive in habitats ranging from the equator to the subarctic and to form large-scale episodic blooms under a wide variety of environmental conditions. Y1 - 2013 U6 - https://doi.org/10.1038/nature12221 SN - 0028-0836 SN - 1476-4687 VL - 499 IS - 7457 SP - 209 EP - 213 PB - Nature Publ. Group CY - London ER - TY - JOUR A1 - Palkopoulou, Eleftheria A1 - Lipson, Mark A1 - Mallick, Swapan A1 - Nielsen, Svend A1 - Rohland, Nadin A1 - Baleka, Sina Isabelle A1 - Karpinski, Emil A1 - Ivancevici, Atma M. A1 - Thu-Hien To, A1 - Kortschak, Daniel A1 - Raison, Joy M. A1 - Qu, Zhipeng A1 - Chin, Tat-Jun A1 - Alt, Kurt W. A1 - Claesson, Stefan A1 - Dalen, Love A1 - MacPhee, Ross D. E. A1 - Meller, Harald A1 - Rocar, Alfred L. A1 - Ryder, Oliver A. A1 - Heiman, David A1 - Young, Sarah A1 - Breen, Matthew A1 - Williams, Christina A1 - Aken, Bronwen L. A1 - Ruffier, Magali A1 - Karlsson, Elinor A1 - Johnson, Jeremy A1 - Di Palma, Federica A1 - Alfoldi, Jessica A1 - Adelsoni, David L. A1 - Mailund, Thomas A1 - Munch, Kasper A1 - Lindblad-Toh, Kerstin A1 - Hofreiter, Michael A1 - Poinar, Hendrik A1 - Reich, David T1 - A comprehensive genomic history of extinct and living elephants JF - Proceedings of the National Academy of Sciences of the United States of America KW - paleogenomics KW - elephantid evolution KW - mammoth KW - admixture KW - species divergence Y1 - 2018 U6 - https://doi.org/10.1073/pnas.1720554115 SN - 0027-8424 VL - 115 IS - 11 SP - E2566 EP - E2574 PB - National Acad. of Sciences CY - Washington ER - TY - JOUR A1 - Sandee, A. J. A1 - Williams, Charlotte K. A1 - Evans, N. R. A1 - Davies, J. E. A1 - Boothby, C. E. A1 - Köhler, Anna A1 - Friend, Richard H. A1 - Holmes, Andrew B. T1 - Solution-processible conjugated electrophosphorescent polymers Y1 - 2004 ER -