TY - JOUR A1 - Gosling, William D. A1 - Scerri, Eleanor A1 - Kaboth-Bahr, Stefanie T1 - The climate and vegetation backdrop to hominin evolution in Africa JF - Philosophical transactions of the Royal Society of London : B, Biological sciences N2 - The most profound shift in the African hydroclimate of the last 1 million years occurred around 300 thousand years (ka) ago. This change in African hydroclimate is manifest as an east-west change in moisture balance that cannot be fully explained through linkages to high latitude climate systems. The east-west shift is, instead, probably driven by a shift in the tropical Walker Circulation related to sea surface temperature change driven by orbital forcing. Comparing records of past vegetation change, and hominin evolution and development, with this breakpoint in the climate system is challenging owing to the paucity of study sites available and uncertainties regarding the dating of records. Notwithstanding these uncertainties we find that, broadly speaking, both vegetation and hominins change around 300 ka. The vegetative backdrop suggests that relative abundance of vegetative resources shifted from western to eastern Africa, although resources would have persisted across the continent. The climatic and vegetation changes probably provided challenges for hominins and are broadly coincident with the appearance of Homo sapiens (ca 315 ka) and the emergence of Middle Stone Age technology. The concomitant changes in climate, vegetation and hominin evolution suggest that these factors are closely intertwined. This article is part of the theme issue 'Tropical forests in the deep human past'. KW - hominid KW - pollen KW - El Nino Southern Oscillation KW - habitat KW - human evolution KW - Homo sapiens Y1 - 2022 U6 - https://doi.org/10.1098/rstb.2020.0483 SN - 0962-8436 SN - 1471-2970 VL - 377 IS - 1849 PB - Royal Society CY - London ER - TY - JOUR A1 - Raafat, Dina A1 - Mrochen, Daniel M. A1 - Al’Sholui, Fawaz A1 - Heuser, Elisa A1 - Ryll, René A1 - Pritchett-Corning, Kathleen R. A1 - Jacob, Jens A1 - Walther, Bernd A1 - Matuschka, Franz-Rainer A1 - Richter, Dania T1 - Molecular epidemiology of methicillin-susceptible and methicillin-resistant Staphylococcus aureus in wild, captive and laboratory rats BT - Effect of habitat on the nasal S. aureus population JF - Toxins N2 - Rats are a reservoir of human- and livestock-associated methicillin-resistant Staphylococcus aureus (MRSA). However, the composition of the natural S. aureus population in wild and laboratory rats is largely unknown. Here, 144 nasal S. aureus isolates from free-living wild rats, captive wild rats and laboratory rats were genotyped and profiled for antibiotic resistances and human-specific virulence genes. The nasal S. aureus carriage rate was higher among wild rats (23.4%) than laboratory rats (12.3%). Free-living wild rats were primarily colonized with isolates of clonal complex (CC) 49 and CC130 and maintained these strains even in husbandry. Moreover, upon livestock contact, CC398 isolates were acquired. In contrast, laboratory rats were colonized with many different S. aureus lineages—many of which are commonly found in humans. Five captive wild rats were colonized with CC398-MRSA. Moreover, a single CC30-MRSA and two CC130-MRSA were detected in free-living or captive wild rats. Rat-derived S. aureus isolates rarely harbored the phage-carried immune evasion gene cluster or superantigen genes, suggesting long-term adaptation to their host. Taken together, our study revealed a natural S. aureus population in wild rats, as well as a colonization pressure on wild and laboratory rats by exposure to livestock- and human-associated S. aureus, respectively. KW - Staphylococcus aureus KW - rat KW - clonal complex KW - host adaptation KW - livestock KW - laboratory KW - coagulation KW - immune evasion cluster KW - habitat KW - epidemiology Y1 - 2020 U6 - https://doi.org/10.3390/toxins12020080 SN - 2072-6651 VL - 12 IS - 2 SP - 1 EP - 22 PB - MDPI CY - Basel ER - TY - JOUR A1 - Ristow, Michael A1 - Panitsa, Maria A1 - Meyer, Stefan A1 - Bergmeier, Erwin T1 - Factors of detection deficits in vascular plant inventories - an island case study JF - Diversity N2 - The degree of completeness of large-scale floristic inventories is often difficult to judge. We compared prior vascular plant species inventories of the Mediterranean island of Limnos (North Aegean, Greece) with 231 recent records from 2016-2021. Together with the recent records, the known number of vascular plant species on the island is 960 native taxa, 63 established neophytes, and 27 species of as yet casual status for a total of 1050 taxa. We looked at a number of traits (plant family, size, flower color, perceptibility, habitat, reproduction period, rarity, and status) to investigate whether they were overrepresented in the dataset of the newly found taxa. Overrepresentation was found in some plant families (e.g., Poaceae and Chenopodiaceae) and for traits such as hydrophytic life form, unobtrusive flower color, coastal as well as agricultural and ruderal habitats, and late (summer/autumn) reproduction period. Apart from the well-known fact of esthetic bias, we found evidence for ecological and perceptibility biases. Plant species inventories based on prior piecemeal collated data should focus on regionally specific species groups and underrepresented and rare habitats. KW - Aegean flora KW - floristic survey KW - Mediterranean island KW - perceptibility KW - habitat KW - plant traits KW - rarity Y1 - 2022 U6 - https://doi.org/10.3390/d14040303 SN - 1424-2818 VL - 14 IS - 4 PB - MDPI CY - Basel ER - TY - JOUR A1 - Fischer, Stefan A1 - Mayer-Scholl, Anne A1 - Imholt, Christian A1 - Spierling, Nastasja G. A1 - Heuser, Elisa A1 - Schmidt, Sabrina A1 - Reil, Daniela A1 - Rosenfeld, Ulrike M. A1 - Jacob, Jens A1 - Nöckler, Karsten A1 - Ulrich, Rainer G. T1 - Leptospira genomospecies and sequence type prevalence in small mammal populations in Germany JF - Vector-Borne and Zoonotic Diseases N2 - Leptospirosis is a worldwide emerging infectious disease caused by zoonotic bacteria of the genus Leptospira. Numerous mammals, including domestic and companion animals, can be infected by Leptospira spp., but rodents and other small mammals are considered the main reservoir. The annual number of recorded human leptospirosis cases in Germany (2001-2016) was 25-166. Field fever outbreaks in strawberry pickers, due to infection with Leptospira kirschneri serovar Grippotyphosa, were reported in 2007 and 2014. To identify the most commonly occurring Leptospira genomospecies, sequence types (STs), and their small mammal host specificity, a monitoring study was performed during 2010-2014 in four federal states of Germany. Initial screening of kidney tissues of 3,950 animals by PCR targeting the lipl32 gene revealed 435 rodents of 6 species and 89 shrews of three species positive for leptospiral DNA. PCR-based analyses resulted in the identification of the genomospecies L. kirschneri (62.7%), Leptospira interrogans (28.3%), and Leptospira borgpetersenii (9.0%), which are represented by four, one, and two STs, respectively. The average Leptospira prevalence was highest (approximate to 30%) in common voles (Microtus arvalis) and field voles (Microtus agrestis). Both species were exclusively infected with L. kirschneri. In contrast, in bank voles (Myodes glareolus) and yellow-necked mice (Apodemus flavicollis), DNA of all three genomospecies was detected, and in common shrews (Sorex araneus) DNA of L. kirschneri and L. borgpetersenii was identified. The association between individual infection status and demographic factors varied between species; infection status was always positively correlated to body weight. In conclusion, the study confirmed a broad geographical distribution of Leptospira in small mammals and suggested an important public health relevance of common and field voles as reservoirs of L. kirschneri. Furthermore, the investigations identified seasonal, habitat-related, as well as individual influences on Leptospira prevalence in small mammals that might impact public health. KW - demography KW - Germany KW - habitat KW - Leptospira spp KW - leptospirosis KW - MLST KW - rodent KW - shrew KW - SLST Y1 - 2018 U6 - https://doi.org/10.1089/vbz.2017.2140 SN - 1530-3667 SN - 1557-7759 VL - 18 IS - 4 SP - 188 EP - 199 PB - Liebert CY - New Rochelle ER - TY - JOUR A1 - Schulze-Makuch, Dirk A1 - Wagner, Dirk A1 - Kounaves, Samuel P. A1 - Mangelsdorf, Kai A1 - Devine, Kevin G. A1 - de Vera, Jean-Pierre A1 - Schmitt-Kopplin, Philippe A1 - Grossart, Hans-Peter A1 - Parro, Victor A1 - Kaupenjohann, Martin A1 - Galy, Albert A1 - Schneider, Beate A1 - Airo, Alessandro A1 - Froesler, Jan A1 - Davila, Alfonso F. A1 - Arens, Felix L. A1 - Caceres, Luis A1 - Cornejo, Francisco Solis A1 - Carrizo, Daniel A1 - Dartnell, Lewis A1 - DiRuggiero, Jocelyne A1 - Flury, Markus A1 - Ganzert, Lars A1 - Gessner, Mark O. A1 - Grathwohl, Peter A1 - Guan, Lisa A1 - Heinz, Jacob A1 - Hess, Matthias A1 - Keppler, Frank A1 - Maus, Deborah A1 - McKay, Christopher P. A1 - Meckenstock, Rainer U. A1 - Montgomery, Wren A1 - Oberlin, Elizabeth A. A1 - Probst, Alexander J. A1 - Saenz, Johan S. A1 - Sattler, Tobias A1 - Schirmack, Janosch A1 - Sephton, Mark A. A1 - Schloter, Michael A1 - Uhl, Jenny A1 - Valenzuela, Bernardita A1 - Vestergaard, Gisle A1 - Woermer, Lars A1 - Zamorano, Pedro T1 - Transitory microbial habitat in the hyperarid Atacama Desert JF - Proceedings of the National Academy of Sciences of the United States of America KW - habitat KW - aridity KW - microbial activity KW - biomarker KW - Mars Y1 - 2018 U6 - https://doi.org/10.1073/pnas.1714341115 SN - 0027-8424 VL - 115 IS - 11 SP - 2670 EP - 2675 PB - National Acad. of Sciences CY - Washington ER -