TY - JOUR A1 - Berg-Mohnicke, Michael A1 - Nendel, Claas T1 - A case for object capabilities as the foundation of a distributed environmental model and simulation infrastructure JF - Environmental modelling & software with environment data news N2 - With the advent of increasingly powerful computational architectures, scientists use these possibilities to create simulations of ever-increasing size and complexity. Large-scale simulations of environmental systems require huge amounts of resources. Managing these in an operational way becomes increasingly complex and difficult to handle for individual scientists. State-of-the-art simulation infrastructures usually provide the necessary re-sources in a centralised setup, which often results in an all-or-nothing choice for the user. Here, we outline an alternative approach to handling this complexity, while rendering the use of high-performance hardware and large datasets still possible. It retains a number of desirable properties: (i) a decentralised structure, (ii) easy sharing of resources to promote collaboration and (iii) secure access to everything, including natural delegation of authority across levels and system boundaries. We show that the object capability paradigm will cover these issues, and present the first steps towards developing a simulation infrastructure based on these principles. KW - Cap'n proto KW - Scientific collaboration KW - Co -development KW - Communication KW - protocol KW - Object capability Y1 - 2022 U6 - https://doi.org/10.1016/j.envsoft.2022.105471 SN - 1364-8152 SN - 1873-6726 VL - 156 PB - Elsevier CY - Oxford ER - TY - GEN A1 - Galke, Lukas A1 - Gerstenkorn, Gunnar A1 - Scherp, Ansgar T1 - A case atudy of closed-domain response suggestion with limited training data T2 - Database and Expert Systems Applications : DEXA 2018 Iinternational workshops N2 - We analyze the problem of response suggestion in a closed domain along a real-world scenario of a digital library. We present a text-processing pipeline to generate question-answer pairs from chat transcripts. On this limited amount of training data, we compare retrieval-based, conditioned-generation, and dedicated representation learning approaches for response suggestion. Our results show that retrieval-based methods that strive to find similar, known contexts are preferable over parametric approaches from the conditioned-generation family, when the training data is limited. We, however, identify a specific representation learning approach that is competitive to the retrieval-based approaches despite the training data limitation. Y1 - 2018 SN - 978-3-319-99133-7 SN - 978-3-319-99132-0 U6 - https://doi.org/10.1007/978-3-319-99133-7_18 SN - 1865-0929 SN - 1865-0937 VL - 903 SP - 218 EP - 229 PB - Springer CY - Berlin ER - TY - INPR A1 - Petroczi, Andrea A1 - Backhouse, Susan H. A1 - Barkoukis, Vassilis A1 - Brand, Ralf A1 - Elbe, Anne-Marie A1 - Lazuras, Larnbros A1 - Lucidi, Fabio T1 - A call for policy guidance on psychometric testing in doping control in sport T2 - International journal of drug policy N2 - One of the fundamental challenges in anti-doping is identifying athletes who use, or are at risk of using, prohibited performance enhancing substances. The growing trend to employ a forensic approach to doping control aims to integrate information from social sciences (e.g., psychology of doping) into organised intelligence to protect clean sport. Beyond the foreseeable consequences of a positive identification as a doping user, this task is further complicated by the discrepancy between what constitutes a doping offence in the World Anti-Doping Code and operationalized in doping research. Whilst psychology plays an important role in developing our understanding of doping behaviour in order to inform intervention and prevention, its contribution to the array of doping diagnostic tools is still in its infancy. In both research and forensic settings, we must acknowledge that (1) socially desirable responding confounds self-reported psychometric test results and (2) that the cognitive complexity surrounding test performance means that the response-time based measures and the lie detector tests for revealing concealed life-events (e.g., doping use) are prone to produce false or non-interpretable outcomes in field settings. Differences in social-cognitive characteristics of doping behaviour that are tested at group level (doping users vs. non-users) cannot be extrapolated to individuals; nor these psychometric measures used for individual diagnostics. In this paper, we present a position statement calling for policy guidance on appropriate use of psychometric assessments in the pursuit of clean sport. We argue that, to date, both self-reported and response-time based psychometric tests for doping have been designed, tested and validated to explore how athletes feel and think about doping in order to develop a better understanding of doping behaviour, not to establish evidence for doping. A false 'positive' psychological profile for doping affects not only the individual 'clean' athlete but also their entourage, their organisation and sport itself. The proposed policy guidance aims to protect the global athletic community against social, ethical and legal consequences from potential misuse of psychological tests, including erroneous or incompetent applications as forensic diagnostic tools in both practice and research. (C) 2015 Elsevier B.V. All rights reserved. KW - Prohibited performance enhancement KW - Athlete KW - Drug KW - Anti-doping KW - Attitude Y1 - 2015 U6 - https://doi.org/10.1016/j.drugpo.2015.04.022 SN - 0955-3959 SN - 1873-4758 VL - 26 IS - 11 SP - 1130 EP - 1139 PB - Elsevier CY - Amsterdam ER - TY - INPR A1 - Rabinovich, Vladimir A1 - Schulze, Bert-Wolfgang A1 - Tarkhanov, Nikolai Nikolaevich T1 - A calculus of boundary value problems in domains with Non-Lipschitz Singular Points N2 - The paper is devoted to pseudodifferential boundary value problems in domains with singular points on the boundary. The tangent cone at a singular point is allowed to degenerate. In particular, the boundary may rotate and oscillate in a neighbourhood of such a point. We show a criterion for the Fredholm property of a boundary value problem and derive estimates of solutions close to singular points. T3 - Preprint - (1997) 09 KW - pseudodifferential operators KW - boundary value problems KW - manifolds with cusps Y1 - 1997 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus-24957 ER - TY - BOOK A1 - Rabinovich, Vladimir A1 - Schulze, Bert-Wolfgang A1 - Tarchanov, Nikolaj N. T1 - A calculus of boundary value problems in domains with Non-Lipschitz singular points T3 - Preprint / Universität Potsdam, Institut für Mathematik Y1 - 1997 VL - 1997, 09 PB - Univ. CY - Potsdam ER - TY - BOOK A1 - Witt, Ingo T1 - A calculus for a class of finitely degenerate pseudodifferential operators T3 - Preprint / Universität Potsdam, Institut für Mathematik, Arbeitsgruppe Partiell Y1 - 2002 SN - 1437-739X PB - Univ. CY - Potsdam ER - TY - INPR A1 - Witt, Ingo T1 - A calculus for a class of finitely degenerate pseudodifferential operators N2 - For a class of degenerate pseudodifferential operators, local parametrices are constructed. This is done in the framework of a pseudodifferential calculus upon adding conditions of trace and potential type, respectively, along the boundary on which the operators degenerate. T3 - Preprint - (2002) 05 Y1 - 2002 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus-26246 ER - TY - JOUR A1 - Salffner, Katharina A1 - Boehm, Michael A1 - Reich, Oliver A1 - Löhmannsröben, Hans-Gerd T1 - A broadband cavity ring-down spectrometer based on an incoherent near infrared light source JF - Applied physics : B, Lasers and optics Y1 - 2014 U6 - https://doi.org/10.1007/s00340-014-5762-9 SN - 0946-2171 SN - 1432-0649 VL - 116 IS - 4 SP - 785 EP - 792 PB - Springer CY - New York ER - TY - JOUR A1 - Ramiaramanantsoa, Tahina A1 - Ratnasingam, Rathish A1 - Shenar, Tomer A1 - Moffat, Anthony F. J. A1 - Rogers, Tamara M. A1 - Popowicz, Adam A1 - Kuschnig, Rainer A1 - Pigulski, Andrzej A1 - Handler, Gerald A1 - Wade, Gregg A. A1 - Zwintz, Konstanze A1 - Weiss, Werner W. T1 - A BRITE view on the massive O-type supergiant V973 Scorpii BT - hints towards internal gravity waves or sub-surface convection zones JF - Monthly notices of the Royal Astronomical Society N2 - Stochastically triggered photospheric light variations reaching similar to 40 mmag peak-to-valley amplitudes have been detected in the O8 Iaf supergiant V973 Scorpii as the outcome of 2 months of high-precision time-resolved photometric observations with the BRIght Target Explorer (BRITE) nanosatellites. The amplitude spectrum of the time series photometry exhibits a pronounced broad bump in the low-frequency regime (less than or similar to 0.9 d(-1)) where several prominent frequencies are detected. A time-frequency analysis of the observations reveals typical mode lifetimes of the order of 5-10 d. The overall features of the observed brightness amplitude spectrum of V973 Sco match well with those extrapolated from two-dimensional hydrodynamical simulations of convectively driven internal gravity waves randomly excited from deep in the convective cores of massive stars. An alternative or additional possible source of excitation from a sub-surface convection zone needs to be explored in future theoretical investigations. KW - convection KW - waves KW - techniques: photometric KW - stars: massive KW - supergiants Y1 - 2018 U6 - https://doi.org/10.1093/mnras/sty1897 SN - 0035-8711 SN - 1365-2966 VL - 480 IS - 1 SP - 972 EP - 986 PB - Oxford Univ. Press CY - Oxford ER - TY - INPR A1 - Aizenberg, Lev A. A1 - Tarkhanov, Nikolai Nikolaevich T1 - A Bohr phenomenon for elliptic equations N2 - In 1914 Bohr proved that there is an r ∈ (0, 1) such that if a power series converges in the unit disk and its sum has modulus less than 1 then, for |z| < r, the sum of absolute values of its terms is again less than 1. Recently analogous results were obtained for functions of several variables. The aim of this paper is to comprehend the theorem of Bohr in the context of solutions to second order elliptic equations meeting the maximum principle. T3 - Preprint - (1999) 18 Y1 - 1999 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus-25547 ER - TY - BOOK A1 - Aizenberg, Lev A. A1 - Tarchanov, Nikolaj N. T1 - A Bohr phenomenon for elliptic equations T3 - Preprint / Universität Potsdam, Institut für Mathematik, Arbeitsgruppe Partiell Y1 - 1999 SN - 1437-739X PB - Univ. CY - Potsdam ER - TY - JOUR A1 - Christakoudi, Sofa A1 - Tsilidis, Konstantinos K. A1 - Muller, David C. A1 - Freisling, Heinz A1 - Weiderpass, Elisabete A1 - Overvad, Kim A1 - Söderberg, Stefan A1 - Häggström, Christel A1 - Pischon, Tobias A1 - Dahm, Christina C. A1 - Zhang, Jie A1 - Tjønneland, Anne A1 - Schulze, Matthias Bernd T1 - A Body Shape Index (ABSI) achieves better mortality risk stratification than alternative indices of abdominal obesity: results from a large European cohort JF - Scientific Reports N2 - Abdominal and general adiposity are independently associated with mortality, but there is no consensus on how best to assess abdominal adiposity. We compared the ability of alternative waist indices to complement body mass index (BMI) when assessing all-cause mortality. We used data from 352,985 participants in the European Prospective Investigation into Cancer and Nutrition (EPIC) and Cox proportional hazards models adjusted for other risk factors. During a mean follow-up of 16.1 years, 38,178 participants died. Combining in one model BMI and a strongly correlated waist index altered the association patterns with mortality, to a predominantly negative association for BMI and a stronger positive association for the waist index, while combining BMI with the uncorrelated A Body Shape Index (ABSI) preserved the association patterns. Sex-specific cohort-wide quartiles of waist indices correlated with BMI could not separate high-risk from low-risk individuals within underweight (BMI<18.5 kg/m(2)) or obese (BMI30 kg/m(2)) categories, while the highest quartile of ABSI separated 18-39% of the individuals within each BMI category, which had 22-55% higher risk of death. In conclusion, only a waist index independent of BMI by design, such as ABSI, complements BMI and enables efficient risk stratification, which could facilitate personalisation of screening, treatment and monitoring. KW - all-cause mortality KW - anthropometric measures KW - mass index KW - overweight KW - cancer KW - prediction KW - adiposity KW - size Y1 - 2020 VL - 10 IS - 1 PB - Springer Nature CY - Berlin ER - TY - GEN A1 - Christakoudi, Sofa A1 - Tsilidis, Konstantinos K. A1 - Muller, David C. A1 - Freisling, Heinz A1 - Weiderpass, Elisabete A1 - Overvad, Kim A1 - Söderberg, Stefan A1 - Häggström, Christel A1 - Pischon, Tobias A1 - Dahm, Christina C. A1 - Zhang, Jie A1 - Tjønneland, Anne A1 - Schulze, Matthias Bernd T1 - A Body Shape Index (ABSI) achieves better mortality risk stratification than alternative indices of abdominal obesity: results from a large European cohort T2 - Postprints der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe N2 - Abdominal and general adiposity are independently associated with mortality, but there is no consensus on how best to assess abdominal adiposity. We compared the ability of alternative waist indices to complement body mass index (BMI) when assessing all-cause mortality. We used data from 352,985 participants in the European Prospective Investigation into Cancer and Nutrition (EPIC) and Cox proportional hazards models adjusted for other risk factors. During a mean follow-up of 16.1 years, 38,178 participants died. Combining in one model BMI and a strongly correlated waist index altered the association patterns with mortality, to a predominantly negative association for BMI and a stronger positive association for the waist index, while combining BMI with the uncorrelated A Body Shape Index (ABSI) preserved the association patterns. Sex-specific cohort-wide quartiles of waist indices correlated with BMI could not separate high-risk from low-risk individuals within underweight (BMI<18.5 kg/m(2)) or obese (BMI30 kg/m(2)) categories, while the highest quartile of ABSI separated 18-39% of the individuals within each BMI category, which had 22-55% higher risk of death. In conclusion, only a waist index independent of BMI by design, such as ABSI, complements BMI and enables efficient risk stratification, which could facilitate personalisation of screening, treatment and monitoring. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 1200 KW - all-cause mortality KW - anthropometric measures KW - mass index KW - overweight KW - cancer KW - prediction KW - adiposity KW - size Y1 - 2020 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-525827 SN - 1866-8372 IS - 1 ER - TY - JOUR A1 - Scianna, Bastian Matteo T1 - A Blueprint for Successful Peacekeeping? BT - The Italians in Beirut (Lebanon), 1982-1984 JF - The international history review N2 - On 6 June 1982, Israel invaded Lebanon to fight the Palestinian Liberation Organization (PLO). Between August 1982 and February 1984, the US, France, Britain and Italy deployed a Multinational Force (MNF) to Beirut. Its task was to act as an interposition force to bolster the government and to bring peace to the people. The mission is often forgotten or merely remembered in context with the bombing of US Marines’ barracks. However, an analysis of the Italian contingent shows that the MNF was not doomed to fail and could accomplish its task when operational and diplomatic efforts were coordinated. The Italian commander in Beirut, General Franco Angioni, followed a successful approach that sustained neutrality, respectful behaviour and minimal force, which resulted in a qualified success of the Italian efforts. KW - Peacekeeping KW - Italy KW - Lebanon KW - Middle East KW - Beirut Y1 - 2018 U6 - https://doi.org/10.1080/07075332.2018.1431804 SN - 0707-5332 SN - 1949-6540 VL - 41 IS - 3 SP - 650 EP - 672 PB - Routledge, Taylor & Francis Group CY - Abingdon ER - TY - GEN A1 - Scianna, Bastian Matteo T1 - A blueprint for successful peacekeeping? BT - the Italians in Beirut (Lebanon), 1982–1984 T2 - The International History Review N2 - On 6 June 1982, Israel invaded Lebanon to fight the Palestinian Liberation Organization (PLO). Between August 1982 and February 1984, the US, France, Britain and Italy deployed a Multinational Force (MNF) to Beirut. Its task was to act as an interposition force to bolster the government and to bring peace to the people. The mission is often forgotten or merely remembered in context with the bombing of US Marines’ barracks. However, an analysis of the Italian contingent shows that the MNF was not doomed to fail and could accomplish its task when operational and diplomatic efforts were coordinated. The Italian commander in Beirut, General Franco Angioni, followed a successful approach that sustained neutrality, respectful behaviour and minimal force, which resulted in a qualified success of the Italian efforts. T3 - Zweitveröffentlichungen der Universität Potsdam : Philosophische Reihe - 143 KW - peacekeeping KW - Italy KW - Lebanon KW - Middle East KW - Beirut Y1 - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-412937 ER - TY - JOUR A1 - Hoehnke, Hans-Jürgen T1 - A Birkhoff theorem for partial algebras via completion Y1 - 1996 ER - TY - GEN A1 - Omidbakhshfard, Mohammad Amin A1 - Neerakkal, Sujeeth A1 - Gupta, Saurabh A1 - Omranian, Nooshin A1 - Guinan, Kieran J. A1 - Brotman, Yariv A1 - Nikoloski, Zoran A1 - Fernie, Alisdair R. A1 - Mueller-Roeber, Bernd A1 - Gechev, Tsanko S. T1 - A Biostimulant Obtained from the Seaweed Ascophyllum nodosum Protects Arabidopsis thaliana from Severe Oxidative Stress T2 - Postprints der Universität Potsdam : Mathematisch Naturwissenschaftliche Reihe N2 - Abiotic stresses cause oxidative damage in plants. Here, we demonstrate that foliar application of an extract from the seaweed Ascophyllum nodosum, SuperFifty (SF), largely prevents paraquat (PQ)-induced oxidative stress in Arabidopsis thaliana. While PQ-stressed plants develop necrotic lesions, plants pre-treated with SF (i.e., primed plants) were unaffected by PQ. Transcriptome analysis revealed induction of reactive oxygen species (ROS) marker genes, genes involved in ROS-induced programmed cell death, and autophagy-related genes after PQ treatment. These changes did not occur in PQ-stressed plants primed with SF. In contrast, upregulation of several carbohydrate metabolism genes, growth, and hormone signaling as well as antioxidant-related genes were specific to SF-primed plants. Metabolomic analyses revealed accumulation of the stress-protective metabolite maltose and the tricarboxylic acid cycle intermediates fumarate and malate in SF-primed plants. Lipidome analysis indicated that those lipids associated with oxidative stress-induced cell death and chloroplast degradation, such as triacylglycerols (TAGs), declined upon SF priming. Our study demonstrated that SF confers tolerance to PQ-induced oxidative stress in A. thaliana, an effect achieved by modulating a range of processes at the transcriptomic, metabolic, and lipid levels. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 823 KW - Ascophyllum nodosum KW - Arabidopsis thaliana KW - biostimulant KW - paraquat KW - priming KW - oxidative stress tolerance KW - reactive oxygen species Y1 - 2020 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-445093 SN - 1866-8372 IS - 823 ER - TY - JOUR A1 - Omidbakhshfard, Mohammad Amin A1 - Neerakkal, Sujeeth A1 - Gupta, Saurabh A1 - Omranian, Nooshin A1 - Guinan, Kieran J. A1 - Brotman, Yariv A1 - Nikoloski, Zoran A1 - Fernie, Alisdair R. A1 - Mueller-Roeber, Bernd A1 - Gechev, Tsanko S. T1 - A Biostimulant Obtained from the Seaweed Ascophyllum nodosum Protects Arabidopsis thaliana from Severe Oxidative Stress JF - International Journal of Molecular Sciences N2 - Abiotic stresses cause oxidative damage in plants. Here, we demonstrate that foliar application of an extract from the seaweed Ascophyllum nodosum, SuperFifty (SF), largely prevents paraquat (PQ)-induced oxidative stress in Arabidopsis thaliana. While PQ-stressed plants develop necrotic lesions, plants pre-treated with SF (i.e., primed plants) were unaffected by PQ. Transcriptome analysis revealed induction of reactive oxygen species (ROS) marker genes, genes involved in ROS-induced programmed cell death, and autophagy-related genes after PQ treatment. These changes did not occur in PQ-stressed plants primed with SF. In contrast, upregulation of several carbohydrate metabolism genes, growth, and hormone signaling as well as antioxidant-related genes were specific to SF-primed plants. Metabolomic analyses revealed accumulation of the stress-protective metabolite maltose and the tricarboxylic acid cycle intermediates fumarate and malate in SF-primed plants. Lipidome analysis indicated that those lipids associated with oxidative stress-induced cell death and chloroplast degradation, such as triacylglycerols (TAGs), declined upon SF priming. Our study demonstrated that SF confers tolerance to PQ-induced oxidative stress in A. thaliana, an effect achieved by modulating a range of processes at the transcriptomic, metabolic, and lipid levels. KW - Ascophyllum nodosum KW - Arabidopsis thaliana KW - biostimulant KW - paraquat KW - priming KW - oxidative stress tolerance KW - reactive oxygen species Y1 - 2019 U6 - https://doi.org/10.3390/ijms21020474 SN - 1422-0067 VL - 21 IS - 2 PB - Molecular Diversity Preservation International CY - Basel ER - TY - JOUR A1 - Badalyan, Artavazd A1 - Neumann-Schaal, Meina A1 - Leimkühler, Silke A1 - Wollenberger, Ursula T1 - A Biosensor for aromatic aldehydes comprising the mediator dependent PaoABC-Aldehyde oxidoreductase JF - Electroanalysis : an international journal devoted to fundamental and practical aspects of electroanalysis N2 - A novel aldehyde oxidoreductase (PaoABC) from Escherichia coli was utilized for the development of an oxygen insensitive biosensor for benzaldehyde. The enzyme was immobilized in polyvinyl alcohol and currents were measured for aldehyde oxidation with different one and two electron mediators with the highest sensitivity for benzaldehyde in the presence of hexacyanoferrate(III). The benzaldehyde biosensor was optimized with respect to mediator concentration, enzyme loading and pH using potassium hexacyanoferrate(III). The linear measuring range is between 0.5200 mu M benzaldehyde. In correspondence with the substrate selectivity of the enzyme in solution the biosensor revealed a preference for aromatic aldehydes and less effective conversion of aliphatic aldehydes. The biosensor is oxygen independent, which is a particularly attractive feature for application. The biosensor can be applied to detect contaminations with benzaldehyde in solvents such as benzyl alcohol, where traces of benzaldehyde in benzyl alcohol down to 0.0042?% can be detected. KW - Aldehyde oxidoreductase KW - Benzaldehyde KW - Biosensor KW - Aromatic aldehydes KW - Molybdenum cofactor Y1 - 2013 U6 - https://doi.org/10.1002/elan.201200362 SN - 1040-0397 VL - 25 IS - 1 SP - 101 EP - 108 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Felisatti, Arianna A1 - Laubrock, Jochen A1 - Shaki, Samuel A1 - Fischer, Martin H. T1 - A biological foundation for spatial–numerical associations BT - the brain's asymmetric frequency tuning JF - Annals of the New York Academy of Sciences N2 - "Left" and "right" coordinates control our spatial behavior and even influence abstract thoughts. For number concepts, horizontal spatial-numerical associations (SNAs) have been widely documented: we associate few with left and many with right. Importantly, increments are universally coded on the right side even in preverbal humans and nonhuman animals, thus questioning the fundamental role of directional cultural habits, such as reading or finger counting. Here, we propose a biological, nonnumerical mechanism for the origin of SNAs on the basis of asymmetric tuning of animal brains for different spatial frequencies (SFs). The resulting selective visual processing predicts both universal SNAs and their context-dependence. We support our proposal by analyzing the stimuli used to document SNAs in newborns for their SF content. As predicted, the SFs contained in visual patterns with few versus many elements preferentially engage right versus left brain hemispheres, respectively, thus predicting left-versus rightward behavioral biases. Our "brain's asymmetric frequency tuning" hypothesis explains the perceptual origin of horizontal SNAs for nonsymbolic visual numerosities and might be extensible to the auditory domain. KW - hemispheric asymmetry KW - numerical cognition KW - SNARC effect KW - spatial KW - frequency tuning KW - spatial-numerical associations KW - spatial vision Y1 - 2020 U6 - https://doi.org/10.1111/nyas.14418 SN - 0077-8923 SN - 1749-6632 VL - 1477 IS - 1 SP - 44 EP - 53 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Boëchat, Iola G. A1 - Weithoff, Guntram A1 - Krüger, Angela A1 - Gücker, Björn A1 - Adrian, Rita T1 - A biochemical explanation for the success of the mixotrophy in the flagellate Ochromonas sp. N2 - We report the influence of different nutritional modes-autotrophy, mixotrophy, and heterotrophy-on the fatty acid and sterol composition of the freshwater flagellate Ochromonas sp. and discuss the ecological significance of our results with respect to the resource competition theory (rct). Polyunsaturated fatty acids (PUFAs) are the most efficient biochemical variable distinguishing between nutritional modes of Ochromonas sp. Decreasing concentrations of PUFAs were observed in the order autotrophs, mixotrophs, heterotrophs. In mixotrophs and heterotrophs, concentrations of saturated fatty acids were higher than those of monounsaturated fatty acids and PUFAs as a result of bacterivory. Stigmasterol was the main sterol in Ochromonas sp., regardless of nutritional mode. Mixotrophs showed higher growth rates than heterotrophs, which could not be explained by rct. Heterotrophs, in turn, exhibited higher growth rates than autotrophs, which were cultured under the same light conditions as mixotrophs. Mixotrophs can synthesize PUFAs, which are important for many physiological functions such as membrane permeability and growth. Thus, mixotrophy facilitated efficient growth as well as the ability to synthesize complex and essential biomolecules. These strong synergetic effects are due to the combination of biochemical benefits of heterotrophic and autotrophic metabolic pathways and cannot be predicted by rct. Y1 - 2007 UR - http://www.aslo.org/lo/ U6 - https://doi.org/10.4319/lo.2007.52.4.1624 SN - 0024-3590 ER - TY - JOUR A1 - Zhang, Shuhao A1 - Bramski, Julia A1 - Tutus, Murat A1 - Pietruszka, Jörg A1 - Böker, Alexander A1 - Reinicke, Stefan T1 - A Biocatalytically Active Membrane Obtained from Immobilization of 2-Deoxy-D-ribose-5-phosphate Aldolase on a Porous Support JF - ACS applied materials & interfaces N2 - Aldol reactions play an important role in organic synthesis, as they belong to the class of highly beneficial C-C-linking reactions. Aldol-type reactions can be efficiently and stereoselectively catalyzed by the enzyme 2-deoxy-D-ribose-5-phosphate aldolase (DERA) to gain key intermediates for pharmaceuticals such as atorvastatin. The immobilization of DERA would open the opportunity for a continuous operation mode which gives access to an efficient, large-scale production of respective organic intermediates. In this contribution, we synthesize and utilize DERA/polymer conjugates for the generation and fixation of a DERA bearing thin film on a polymeric membrane support. The conjugation strongly increases the tolerance of the enzyme toward the industrial relevant substrate acetaldehyde while UV-cross-linkable groups along the conjugated polymer chains provide the opportunity for covalent binding to the support. First, we provide a thorough characterization of the conjugates followed by immobilization tests on representative, nonporous cycloolefinic copolymer supports. Finally, immobilization on the target supports constituted of polyacrylonitrile (PAN) membranes is performed, and the resulting enzymatically active membranes are implemented in a simple membrane module setup for the first assessment of biocatalytic performance in the continuous operation mode using the combination hexanal/acetaldehyde as the substrate. KW - 2-deoxy-D-ribose-5-phoshphate aldolase KW - enzyme immobilization KW - enzymatically active membrane KW - enzyme/polymer conjugate KW - self-assembly Y1 - 2019 U6 - https://doi.org/10.1021/acsami.9b12029 SN - 1944-8244 SN - 1944-8252 VL - 11 IS - 37 SP - 34441 EP - 34453 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Lettau, Kristian A1 - Warsinke, Axel A1 - Katterle, Martin A1 - Danielsson, Bengt A1 - Scheller, Frieder W. T1 - A bifunctional molecularly imprinted polymer (MIP): analysis of binding and catalysis by a thermistor N2 - Binding or catalysis? Both can be distinguished with a molecularly imprinted polymer (MIP) by the different patterns of heat generation. The catalytically active sites, like in the corresponding enzyme, generate a steady-state temperature increase. Thus, enzyme-like catalysis and antibody-analogue binding are analyzed simultaneously in a bifunctional MIP for the first time (see scheme). Y1 - 2006 UR - http://www3.interscience.wiley.com/cgi-bin/jhome/26737/ U6 - https://doi.org/10.1002/anie.200601796 ER - TY - JOUR A1 - Eremenko, A. V. A1 - Makower, Alexander A1 - Bauer, Christian G. A1 - Kurochkin, I. N. A1 - Scheller, Frieder W. T1 - A bienzyme electrode for tyrosine containing peptides determination Y1 - 1997 ER - TY - JOUR A1 - Gajovic, Nenad A1 - Warsinke, Axel A1 - Scheller, Frieder W. T1 - A bienzyme electrode for L-malate based on a novel and general design Y1 - 1998 ER - TY - JOUR A1 - Huang, T. A1 - Warsinke, Axel A1 - Koroljova-Skorobogatko, O. V. A1 - Makower, Alexander A1 - Kuwana, T. A1 - Scheller, Frieder W. T1 - A bienzyme carbon paste electrode for the sensitive detection of NADPH and the measurement of glucose-6- phosphate dehydrogenase Y1 - 1999 ER - TY - JOUR A1 - Jann, Werner A1 - Jantz, Bastian T1 - A better performance and performance management? Y1 - 2008 ER - TY - JOUR A1 - Klauschies, Toni A1 - Coutinho, Renato Mendes A1 - Gaedke, Ursula T1 - A beta distribution-based moment closure enhances the reliability of trait-based aggregate models for natural populations and communities JF - Ecological modelling : international journal on ecological modelling and engineering and systems ecolog N2 - Ecological communities are complex adaptive systems that exhibit remarkable feedbacks between their biomass and trait dynamics. Trait-based aggregate models cope with this complexity by focusing on the temporal development of the community’s aggregate properties such as its total biomass, mean trait and trait variance. They are based on particular assumptions about the shape of the underlying trait distribution, which is commonly assumed to be normal. However, ecologically important traits are usually restricted to a finite range, and empirical trait distributions are often skewed or multimodal. As a result, normal distribution-based aggregate models may fail to adequately represent the biomass and trait dynamics of natural communities. We resolve this mismatch by developing a new moment closure approach assuming the trait values to be beta-distributed. We show that the beta distribution captures important shape properties of both observed and simulated trait distributions, which cannot be captured by a Gaussian. We further demonstrate that a beta distribution-based moment closure can strongly enhance the reliability of trait-based aggregate models. We compare the biomass, mean trait and variance dynamics of a full trait distribution (FD) model to the ones of beta (BA) and normal (NA) distribution-based aggregate models, under different selection regimes. This way, we demonstrate under which general conditions (stabilizing, fluctuating or disruptive selection) different aggregate models are reliable tools. All three models predicted very similar biomass and trait dynamics under stabilizing selection yielding unimodal trait distributions with small standing trait variation. We also obtained an almost perfect match between the results of the FD and BA models under fluctuating selection, promoting skewed trait distributions and ongoing oscillations in the biomass and trait dynamics. In contrast, the NA model showed unrealistic trait dynamics and exhibited different alternative stable states, and thus a high sensitivity to initial conditions under fluctuating selection. Under disruptive selection, both aggregate models failed to reproduce the results of the FD model with the mean trait values remaining within their ecologically feasible ranges in the BA model but not in the NA model. Overall, a beta distribution-based moment closure strongly improved the realism of trait-based aggregate models. KW - Moment closure KW - Normal and beta distribution KW - Skewed and peaked trait distributions KW - Fitness landscape and frequency-dependent selection KW - Eco-evolutionary dynamics KW - Modelling functional diversity Y1 - 2018 U6 - https://doi.org/10.1016/j.ecolmodel.2018.02.001 SN - 0304-3800 SN - 1872-7026 VL - 381 SP - 46 EP - 77 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Wolff, Martin A1 - Zhang-Haagen, Bo A1 - Decker, Christina A1 - Barz, Bogdan A1 - Schneider, Mario A1 - Biehl, Ralf A1 - Radulescu, Aurel A1 - Strodel, Birgit A1 - Willbold, Dieter A1 - Nagel-Steger, Luitgard T1 - A beta 42 pentamers/hexamers are the smallest detectable oligomers in solution JF - Scientific reports Y1 - 2017 U6 - https://doi.org/10.1038/s41598-017-02370-3 SN - 2045-2322 VL - 7 PB - Nature Publ. Group CY - London ER - TY - JOUR A1 - Gschwind, Yves J. A1 - Kressig, Reto W. A1 - Lacroix, Andre A1 - Mühlbauer, Thomas A1 - Pfenninger, Barbara A1 - Granacher, Urs T1 - A best practice fall prevention exercise program to improve balance, strength/power, and psychosocial health in older adults - study protocol for a randomized controlled trial JF - BMC geriatrics N2 - Background: With increasing age neuromuscular deficits (e.g., sarcopenia) may result in impaired physical performance and an increased risk for falls. Prominent intrinsic fall-risk factors are age-related decreases in balance and strength / power performance as well as cognitive decline. Additional studies are needed to develop specifically tailored exercise programs for older adults that can easily be implemented into clinical practice. Thus, the objective of the present trial is to assess the effects of a fall prevention program that was developed by an interdisciplinary expert panel on measures of balance, strength / power, body composition, cognition, psychosocial well-being, and falls self-efficacy in healthy older adults. Additionally, the time-related effects of detraining are tested. Methods/Design: Healthy old people (n = 54) between the age of 65 to 80 years will participate in this trial. The testing protocol comprises tests for the assessment of static / dynamic steady-state balance (i.e., Sharpened Romberg Test, instrumented gait analysis), proactive balance (i.e., Functional Reach Test; Timed Up and Go Test), reactive balance (i.e., perturbation test during bipedal stance; Push and Release Test), strength (i.e., hand grip strength test; Chair Stand Test), and power (i.e., Stair Climb Power Test; countermovement jump). Further, body composition will be analysed using a bioelectrical impedance analysis system. In addition, questionnaires for the assessment of psychosocial (i.e., World Health Organisation Quality of Life Assessment-Bref), cognitive (i.e., Mini Mental State Examination), and fall risk determinants (i.e., Fall Efficacy Scale -International) will be included in the study protocol. Participants will be randomized into two intervention groups or the control / waiting group. After baseline measures, participants in the intervention groups will conduct a 12-week balance and strength / power exercise intervention 3 times per week, with each training session lasting 30 min. (actual training time). One intervention group will complete an extensive supervised training program, while the other intervention group will complete a short version (` 3 times 3') that is home-based and controlled by weekly phone calls. Post-tests will be conducted right after the intervention period. Additionally, detraining effects will be measured 12 weeks after program cessation. The control group / waiting group will not participate in any specific intervention during the experimental period, but will receive the extensive supervised program after the experimental period. Discussion: It is expected that particularly the supervised combination of balance and strength / power training will improve performance in variables of balance, strength / power, body composition, cognitive function, psychosocial well-being, and falls self-efficacy of older adults. In addition, information regarding fall risk assessment, dose-response-relations, detraining effects, and supervision of training will be provided. Further, training-induced health-relevant changes, such as improved performance in activities of daily living, cognitive function, and quality of life, as well as a reduced risk for falls may help to lower costs in the health care system. Finally, practitioners, therapists, and instructors will be provided with a scientifically evaluated feasible, safe, and easy-to-administer exercise program for fall prevention. KW - Seniors KW - Fall risk assessment KW - Resistance training KW - Postural stability Y1 - 2013 U6 - https://doi.org/10.1186/1471-2318-13-105 SN - 1471-2318 VL - 13 IS - 4 PB - BioMed Central CY - London ER - TY - GEN A1 - Gschwind, Yves J. A1 - Kressig, Reto W. A1 - Lacroix, Andre A1 - Mühlbauer, Thomas A1 - Pfenninger, Barbara A1 - Granacher, Urs T1 - A best practice fall prevention exercise program to improve balance, strength/power, and psychosocial health in older adults BT - study protocol for a randomized controlled trial T2 - Postprints der Universität Potsdam : Humanwissenschaftliche Reihe N2 - Background: With increasing age neuromuscular deficits (e.g., sarcopenia) may result in impaired physical performance and an increased risk for falls. Prominent intrinsic fall-risk factors are age-related decreases in balance and strength / power performance as well as cognitive decline. Additional studies are needed to develop specifically tailored exercise programs for older adults that can easily be implemented into clinical practice. Thus, the objective of the present trial is to assess the effects of a fall prevention program that was developed by an interdisciplinary expert panel on measures of balance, strength / power, body composition, cognition, psychosocial well-being, and falls self-efficacy in healthy older adults. Additionally, the time-related effects of detraining are tested. Methods/Design: Healthy old people (n = 54) between the age of 65 to 80 years will participate in this trial. The testing protocol comprises tests for the assessment of static / dynamic steady-state balance (i.e., Sharpened Romberg Test, instrumented gait analysis), proactive balance (i.e., Functional Reach Test; Timed Up and Go Test), reactive balance (i.e., perturbation test during bipedal stance; Push and Release Test), strength (i.e., hand grip strength test; Chair Stand Test), and power (i.e., Stair Climb Power Test; countermovement jump). Further, body composition will be analysed using a bioelectrical impedance analysis system. In addition, questionnaires for the assessment of psychosocial (i.e., World Health Organisation Quality of Life Assessment-Bref), cognitive (i.e., Mini Mental State Examination), and fall risk determinants (i.e., Fall Efficacy Scale -International) will be included in the study protocol. Participants will be randomized into two intervention groups or the control / waiting group. After baseline measures, participants in the intervention groups will conduct a 12-week balance and strength / power exercise intervention 3 times per week, with each training session lasting 30 min. (actual training time). One intervention group will complete an extensive supervised training program, while the other intervention group will complete a short version (` 3 times 3') that is home-based and controlled by weekly phone calls. Post-tests will be conducted right after the intervention period. Additionally, detraining effects will be measured 12 weeks after program cessation. The control group / waiting group will not participate in any specific intervention during the experimental period, but will receive the extensive supervised program after the experimental period. Discussion: It is expected that particularly the supervised combination of balance and strength / power training will improve performance in variables of balance, strength / power, body composition, cognitive function, psychosocial well-being, and falls self-efficacy of older adults. In addition, information regarding fall risk assessment, dose-response-relations, detraining effects, and supervision of training will be provided. Further, training-induced health-relevant changes, such as improved performance in activities of daily living, cognitive function, and quality of life, as well as a reduced risk for falls may help to lower costs in the health care system. Finally, practitioners, therapists, and instructors will be provided with a scientifically evaluated feasible, safe, and easy-to-administer exercise program for fall prevention. KW - seniors KW - fall risk assessment KW - resistance training KW - postural stability Y1 - 2020 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-427104 SN - 1866-8364 IS - 604 ER - TY - THES A1 - Hesse, Günter T1 - A benchmark for enterprise stream processing architectures T1 - Ein Benchmark für Architekturen zur Datenstromverarbeitung im Unternehmenskontext N2 - Data stream processing systems (DSPSs) are a key enabler to integrate continuously generated data, such as sensor measurements, into enterprise applications. DSPSs allow to steadily analyze information from data streams, e.g., to monitor manufacturing processes and enable fast reactions to anomalous behavior. Moreover, DSPSs continuously filter, sample, and aggregate incoming streams of data, which reduces the data size, and thus data storage costs. The growing volumes of generated data have increased the demand for high-performance DSPSs, leading to a higher interest in these systems and to the development of new DSPSs. While having more DSPSs is favorable for users as it allows choosing the system that satisfies their requirements the most, it also introduces the challenge of identifying the most suitable DSPS regarding current needs as well as future demands. Having a solution to this challenge is important because replacements of DSPSs require the costly re-writing of applications if no abstraction layer is used for application development. However, quantifying performance differences between DSPSs is a difficult task. Existing benchmarks fail to integrate all core functionalities of DSPSs and lack tool support, which hinders objective result comparisons. Moreover, no current benchmark covers the combination of streaming data with existing structured business data, which is particularly relevant for companies. This thesis proposes a performance benchmark for enterprise stream processing called ESPBench. With enterprise stream processing, we refer to the combination of streaming and structured business data. Our benchmark design represents real-world scenarios and allows for an objective result comparison as well as scaling of data. The defined benchmark query set covers all core functionalities of DSPSs. The benchmark toolkit automates the entire benchmark process and provides important features, such as query result validation and a configurable data ingestion rate. To validate ESPBench and to ease the use of the benchmark, we propose an example implementation of the ESPBench queries leveraging the Apache Beam software development kit (SDK). The Apache Beam SDK is an abstraction layer designed for developing stream processing applications that is applied in academia as well as enterprise contexts. It allows to run the defined applications on any of the supported DSPSs. The performance impact of Apache Beam is studied in this dissertation as well. The results show that there is a significant influence that differs among DSPSs and stream processing applications. For validating ESPBench, we use the example implementation of the ESPBench queries developed using the Apache Beam SDK. We benchmark the implemented queries executed on three modern DSPSs: Apache Flink, Apache Spark Streaming, and Hazelcast Jet. The results of the study prove the functioning of ESPBench and its toolkit. ESPBench is capable of quantifying performance characteristics of DSPSs and of unveiling differences among systems. The benchmark proposed in this thesis covers all requirements to be applied in enterprise stream processing settings, and thus represents an improvement over the current state-of-the-art. N2 - Data Stream Processing Systems (DSPSs) sind eine Schlüsseltechnologie, um kontinuierlich generierte Daten, wie beispielsweise Sensormessungen, in Unternehmensanwendungen zu integrieren. Die durch DSPSs ermöglichte permanente Analyse von Datenströmen kann dabei zur Überwachung von Produktionsprozessen genutzt werden, um möglichst zeitnah auf ungewollte Veränderungen zu reagieren. Darüber hinaus filtern, sampeln und aggregieren DSPSs einkommende Daten, was die Datengröße reduziert und so auch etwaige Kosten für die Datenspeicherung. Steigende Datenvolumen haben in den letzten Jahren den Bedarf für performante DSPSs steigen lassen, was zur Entwicklung neuer DSPSs führte. Während eine große Auswahl an verfügbaren Systemen generell gut für Nutzer ist, stellt es potentielle Anwender auch vor die Herausforderung, das für aktuelle und zukünftige Anforderungen passendste DSPS zu identifizieren. Es ist wichtig, eine Lösung für diese Herausforderung zu haben, da das Austauschen von einem DSPS zu teuren Anpassungen oder Neuentwicklungen der darauf laufenden Anwendungen erfordert, falls für deren Entwicklung keine Abstraktionsschicht verwendet wurde. Das quantitative Vergleichen von DSPSs ist allerdings eine schwierige Aufgabe. Existierende Benchmarks decken nicht alle Kernfunktionalitäten von DSPSs ab und haben keinen oder unzureichenden Tool-Support, was eine objektive Ergebnisberechnung hinsichtlich der Performanz erschwert. Zudem beinhaltet kein Benchmark die Integration von Streamingdaten und strukturierten Geschäftsdaten, was ein besonders für Unternehmen relevantes Szenario ist. Diese Dissertation stellt ESPBench vor, einen neuen Benchmark für Stream Processing-Szenarien im Unternehmenskontext. Der geschäftliche Kontext wird dabei durch die Verbindung von Streamingdaten und Geschäftsdaten dargestellt. Das Design von ESPBench repräsentiert Szenarien der realen Welt, stellt die objektive Berechnung von Benchmarkergebnissen sicher und erlaubt das Skalieren über Datencharakteristiken. Das entwickelte Toolkit des Benchmarks stellt wichtige Funktionalitäten bereit, wie beispielsweise die Automatisierung den kompletten Benchmarkprozesses sowie die Überprüfung der Abfrageergebnisse hinsichtlich ihrer Korrektheit. Um ESPBench zu validieren und die Anwendung weiter zu vereinfachen, haben wir eine Beispielimplementierung der Queries veröffentlicht. Die Implementierung haben wir mithilfe des in Industrie und Wissenschaft eingesetzten Softwareentwicklungsbaukastens Apache Beam durchgeführt, der es ermöglicht, entwickelte Anwendungen auf allen unterstützten DSPSs auszuführen. Den Einfluss auf die Performanz des Verwendens von Apache Beam wird dabei ebenfalls in dieser Arbeit untersucht. Weiterhin nutzen wir die veröffentlichte Beispielimplementierung der Queries um drei moderne DSPSs mit ESPBench zu untersuchen: Apache Flink, Apache Spark Streaming und Hazelcast Jet. Der Ergebnisse der Studie verdeutlichen die Funktionsfähigkeit von ESPBench und dessen Toolkit. ESPBench befähigt Performanzcharakteristiken von DSPSs zu quantifizieren und Unterschiede zwischen Systemen aufzuzeigen. Der in dieser Dissertation vorgestellte Benchmark erfüllt alle Anforderungen, um in Stream Processing-Szenarien im Unternehmenskontext eingesetzt zu werden und stellt somit eine Verbesserung der aktuellen Situation dar. KW - stream processing KW - performance KW - benchmarking KW - dsps KW - espbench KW - benchmark KW - Performanz KW - Datenstromverarbeitung KW - Benchmark Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-566000 ER - TY - JOUR A1 - Mulder, Christian A1 - Boit, Alice A1 - Bonkowski, Michael A1 - De Ruiter, Peter C. A1 - Mancinelli, Giorgio A1 - Van der Heijden, Marcel G. A. A1 - Van Wijnen, Harm J. A1 - Vonk, J. Arie A1 - Rutgers, Michiel ED - Woodward, G T1 - A belowground perspective on dutch agroecosystems how soil organisms interact to support ecosystem services JF - Advances in ecological research JF - Advances in Ecological Research N2 - 1. New patterns and trends in land use are becoming increasingly evident in Europe's heavily modified landscape and else whereas sustainable agriculture and nature restoration are developed as viable long-term alternatives to intensively farmed arable land. The success of these changes depends on how soil biodiversity and processes respond to changes in management. To improve our understanding of the community structure and ecosystem functioning of the soil biota, we analyzed abiotic variables across 200 sites, and biological variables across 170 sites in The Netherlands, one of the most intensively farmed countries. The data were derived from the Dutch Soil Quality Network (DSQN), a long-term monitoring framework designed to obtain ecological insight into soil types (STs) and ecosystem types (ETs). 2. At the outset we describe STs and biota, and we estimate the contribution of various groups to the provision of ecosystem services. We focused on interactive effects of soil properties on community patterns and ecosystem functioning using food web models. Ecologists analyze soil food webs by means of mechanistic and statistical modelling, linking network structure to energy flow and elemental dynamics commonly based on allometric scaling. 3. We also explored how predatory and metabolic processes are constrained by body size, diet and metabolic type, and how these constraints govern the interactions within and between trophic groups. In particular, we focused on how elemental fluxes determine the strengths of ecological interactions, and the resulting ecosystem services, in terms of sustenance of soil fertility. 4. We discuss data mining, food web visualizations, and an appropriate categorical way to capture subtle interrelationships within the DSQN dataset. Sampled metazoans were used to provide an overview of below-ground processes and influences of land use. Unlike most studies to date we used data from the entire size spectrum, across 15 orders of magnitude, using body size as a continuous trait crucial for understanding ecological services. 5. Multimodality in the frequency distributions of body size represents a performance filter that acts as a buffer to environmental change. Large differences in the body-size distributions across ETs and STs were evident. Most observed trends support the hypothesis that the direct influence of ecological stoichiometry on the soil biota as an independent predictor (e.g. in the form of nutrient to carbon ratios), and consequently on the allometric scaling, is more dominant than either ET or ST. This provides opportunities to develop a mechanistic and physiologically oriented model for the distribution of species' body sizes, where responses of invertebrates can be predicted. 6. Our results highlight the different roles that organisms play in a number of key ecosystem services. Such a trait-based research has unique strengths in its rigorous formulation of fundamental scaling rules, as well as in its verifiability by empirical data. Nonetheless, it still has weaknesses that remain to be addressed, like the consequences of intraspecific size variation, the high degree of omnivory, and a possibly inaccurate assignment to trophic groups. 7. Studying the extent to which nutrient levels influence multitrophic interactions and how different land-use regimes affect soil biodiversity is clearly a fruitful area for future research to develop predictive models for soil ecosystem services under different management regimes. No similar efforts have been attempted previously for soil food webs, and our dataset has the potential to test and further verify its usefulness at an unprecedented space scale. Y1 - 2011 SN - 978-0-12-374794-5 U6 - https://doi.org/10.1016/B978-0-12-374794-5.00005-5 SN - 0065-2504 VL - 44 IS - 2 SP - 277 EP - 357 PB - Elsevier CY - San Diego ER - TY - JOUR A1 - Mariucci, Ester A1 - Ray, Kolyan A1 - Szabo, Botond T1 - A Bayesian nonparametric approach to log-concave density estimation JF - Bernoulli : official journal of the Bernoulli Society for Mathematical Statistics and Probability N2 - The estimation of a log-concave density on R is a canonical problem in the area of shape-constrained nonparametric inference. We present a Bayesian nonparametric approach to this problem based on an exponentiated Dirichlet process mixture prior and show that the posterior distribution converges to the log-concave truth at the (near-) minimax rate in Hellinger distance. Our proof proceeds by establishing a general contraction result based on the log-concave maximum likelihood estimator that prevents the need for further metric entropy calculations. We further present computationally more feasible approximations and both an empirical and hierarchical Bayes approach. All priors are illustrated numerically via simulations. KW - convergence rate KW - density estimation KW - Dirichlet mixture KW - log-concavity KW - nonparametric hypothesis testing KW - posterior distribution Y1 - 2020 U6 - https://doi.org/10.3150/19-BEJ1139 SN - 1350-7265 SN - 1573-9759 VL - 26 IS - 2 SP - 1070 EP - 1097 PB - International Statistical Institute CY - The Hague ER - TY - JOUR A1 - Rabe, Maximilian Michael A1 - Chandra, Johan A1 - Krügel, André A1 - Seelig, Stefan A. A1 - Vasishth, Shravan A1 - Engbert, Ralf T1 - A bayesian approach to dynamical modeling of eye-movement control in reading of normal, mirrored, and scrambled texts JF - Psychological Review N2 - In eye-movement control during reading, advanced process-oriented models have been developed to reproduce behavioral data. So far, model complexity and large numbers of model parameters prevented rigorous statistical inference and modeling of interindividual differences. Here we propose a Bayesian approach to both problems for one representative computational model of sentence reading (SWIFT; Engbert et al., Psychological Review, 112, 2005, pp. 777-813). We used experimental data from 36 subjects who read the text in a normal and one of four manipulated text layouts (e.g., mirrored and scrambled letters). The SWIFT model was fitted to subjects and experimental conditions individually to investigate between- subject variability. Based on posterior distributions of model parameters, fixation probabilities and durations are reliably recovered from simulated data and reproduced for withheld empirical data, at both the experimental condition and subject levels. A subsequent statistical analysis of model parameters across reading conditions generates model-driven explanations for observable effects between conditions. KW - reading eye movements KW - dynamical models KW - Bayesian inference KW - oculomotor KW - control KW - individual differences Y1 - 2021 U6 - https://doi.org/10.1037/rev0000268 SN - 0033-295X SN - 1939-1471 VL - 128 IS - 5 SP - 803 EP - 823 PB - American Psychological Association CY - Washington ER - TY - GEN A1 - Balazadeh, Salma A1 - Müller-Röber, Bernd T1 - A balance to death T2 - Nature plants N2 - Leaf senescence plays a crucial role in nutrient recovery in late-stage plant development and requires vast transcriptional reprogramming by transcription factors such as ORESARA1 (ORE1). A proteolytic mechanism is now found to control ORE1 degradation, and thus senescence, during nitrogen starvation. Y1 - 2018 U6 - https://doi.org/10.1038/s41477-018-0279-6 SN - 2055-026X SN - 2055-0278 VL - 4 IS - 11 SP - 863 EP - 864 PB - Nature Publ. Group CY - London ER - TY - JOUR A1 - Theves, Matthias A1 - Taktikos, Johannes A1 - Zaburdaev, Vasily A1 - Stark, Holger A1 - Beta, Carsten T1 - A bacterial swimmer with two alternating speeds of propagation JF - Biophysical journal N2 - We recorded large data sets of swimming trajectories of the soil bacterium Pseudomonas putida. Like other prokaryotic swimmers, P. putida exhibits a motion pattern dominated by persistent runs that are interrupted by turning events. An in-depth analysis of their swimming trajectories revealed that the majority of the turning events is characterized by an angle of phi(1) = 180 degrees (reversals). To a lesser extent, turning angles of phi(2 Sigma Sigma Sigma Sigma) = 00 are also found. Remarkably, we observed that, upon a reversal, the swimming speed changes by a factor of two on average a prominent feature of the motion pattern that, to our knowledge, has not been reported before. A theoretical model, based on the experimental values for the average run time and the rotational diffusion, recovers the mean-square displacement of P. putida if the two distinct swimming speeds are taken into account. Compared to a swimmer that moves with a constant intermediate speed, the mean-square displacement is strongly enhanced. We furthermore observed a negative dip in the directional autocorrelation at intermediate times, a feature that is only recovered in an extended model, where the nonexponential shape of the run-time distribution is taken into account. Y1 - 2013 U6 - https://doi.org/10.1016/j.bpj.2013.08.047 SN - 0006-3495 SN - 1542-0086 VL - 105 IS - 8 SP - 1915 EP - 1924 PB - Cell Press CY - Cambridge ER - TY - THES A1 - Stephan, Mareike Sophia T1 - A bacterial mimetic system to study bacterial inactivation and infection N2 - The emerging threat of antibiotic-resistant bacteria has become a global challenge in the last decades, leading to a rising demand for alternative treatments for bacterial infections. One approach is to target the bacterial cell envelope, making understanding its biophysical properties crucial. Specifically, bacteriophages use the bacterial envelope as an entry point to initiate infection, and they are considered important building blocks of new antibiotic strategies against drug-resistant bacteria.. Depending on the structure of the cell wall, bacteria are classified as Gram-negative and Gram-positive. Gram-negative bacteria are equipped with a complex cell envelope composed of two lipid membranes enclosing a rigid peptidoglycan layer. The synthesis machinery of the Gram-negative cell envelope is the target of antimicrobial agents, including new physical sanitizing procedures addressing the outer membrane (OM). It is therefore very important to study the biophysical properties of the Gram-negative bacterial cell envelope. The high complexity of the Gram-negative OM sets the demand for a model system in which the contribution of individual components can be evaluated separately. In this respect, giant unilamellar vesicles (GUVs) are promising membrane systems to study membrane properties while controlling parameters such as membrane composition and surrounding medium conditions. The aim of this work was to develop methods and approaches for the preparation and characterization of a GUV-based membrane model that mimics the OM of the Gram-negative cell envelope. A major component of the OM is the lipopolysaccharide (LPS) on the outside of the OM heterobilayer. The vesicle model was designed to contain LPS in the outer leaflet and lipids in the inner leaflet. Furthermore, the interaction of the prepared LPS-GUVs with bacteriophages was tested. LPS containing GUVs were prepared by adapting the inverted emulsion technique to meet the challenging properties of LPS, namely their high self-aggregation rate in aqueous solutions. Notably, an additional emulsification step together with the adaption of solution conditions was employed to asymmetrically incorporate LPS containing long polysaccharide chains into the artificial membranes. GUV membrane asymmetry was verified with a fluorescence quenching assay. Since the necessary precautions for handling the quenching agent sodium dithionite are often underestimated and poorly described, important parameters were tested and identified to obtain a stable and reproducible assay. In the context of varied LPS incorporation, a microscopy-based technique was introduced to determine the LPS content on individual GUVs and to directly compare vesicle properties and LPS coverage. Diffusion coefficient measurements in the obtained GUVs showed that increasing LPS concentrations in the membranes resulted in decreased diffusivity. Employing LPS-GUVs we could demonstrate that a Salmonella bacteriophage bound with high specificity to its LPS receptor when presented at the GUV surface, and that the number of bound bacteriophages scaled with the amount of presented LPS receptor. In addition to binding, the bacteriophages were able to eject their DNA into the vesicle lumen. LPS-GUVs thus provide a starting platform for bottom-up approaches for the generation of more complex membranes, in which the effects of individual components on the membrane properties and the interaction with antimicrobial agents such as bacteriophages could be explored. N2 - Die wachsende Bedrohung durch antibiotikaresistente Bakterien ist in den letzten Jahrzehnten zu einer globalen Herausforderung geworden, was zu einer steigenden Nachfrage nach alternativen Behandlungsmethoden für bakterielle Infektionen geführt hat. Ein Ansatz besteht darin, die bakterielle Zellhülle anzugreifen, weshalb das Verständnis ihrer biophysikalischen Eigenschaften entscheidend ist. Insbesondere Bakteriophagen, Viren, die Bakterien infizieren, nutzen die Bakterienhülle als ersten Angriffspunkt für die Infektion und gelten als wichtige Bausteine für neue Antibiotikastrategien gegen arzneimittelresistente Bakterien. Je nach Struktur der Zellwand werden Bakterien in gramnegative und grampositive Bakterien eingeteilt. Gramnegative Bakterien sind mit einer komplexen Zellhülle ausgestattet. Daher ist es sehr wichtig, ihre biophysikalischen Eigenschaften zu untersuchen. Die hohe Komplexität der äußeren Zellhülle, auch äußere Membran genannt, erfordert ein Modellsystem, in dem der Beitrag jeder einzelnen Komponente separat bewertet werden kann. In dieser Hinsicht sind Vesikel-basierte Modellsysteme sehr vielversprechend, da sie wichtige Eigenschaften der äußeren Membran simulieren können, aber in ihrer Komplexität stark reduziert und kontrollierbar sind. Ziel dieser Arbeit war es, Methoden und Ansätze für die Herstellung und Charakterisierung eines Vesikel-basierten Modells zu entwickeln, das die äußere Membran der gramnegativen bakteriellen Zellhülle nachahmt. Ein Hauptbestandteil der äußeren Membran ist Lipopolysaccharid (LPS), das asymmetrisch auf der Außenseite der äußeren Membran vorhanden ist. Das Vesikelmodell wurde so konzipiert, dass es außen LPS und innen Phospholipide enthält. Die Herstellung des beschriebenen Modellsystems erforderte einige Anpassungen, da die Hüllkomponente LPS eine hohe Tendenz zur Bildung von Selbstaggregaten aufweist. Durch die Einführung eines zusätzlichen Schrittes in das Standardprotokoll konnten Vesikel mit LPS-Inkorporation erzeugt werden. Es wurde sowohl die Menge als auch die asymmetrische Verteilung des LPS-Einbaus bestimmt. Mit Hilfe von Bakteriophagen sollte die biologische Wirkung des Modellsystems getestet werden. Es wurde gezeigt, dass Bakteriophagen, die spezifisch LPS erkennen und binden, nach Zugabe zum Modellsystem die Vesikel binden und ihr genetisches Material in das Vesikel-Innere injizieren. Die hier beschriebenen LPS-haltigen Vesikel können als Ausgangsplattform für Bottom-up-Ansätze zur Herstellung komplexerer Membranen verwendet werden. Mit diesen komplexeren, aber kontrollierbaren Systemen lassen sich die Auswirkungen einzelner Komponenten der bakteriellen Zellhülle auf die Eigenschaften der Zellhülle sowie ihre Wechselwirkung mit antimikrobiellen Wirkstoffen wie Bakteriophagen untersuchen. KW - Bakterien KW - Bakteriophagen KW - Zellmembran KW - Vesikel KW - Konfokale Mikroskopie KW - Lipopolysaccharid KW - gramnegativ KW - bacteria KW - bacteriophage KW - cell membrane KW - vesicle KW - confocal microscopy KW - lipopolysaccharide KW - gram-negative Y1 - 2023 ER - TY - JOUR A1 - Ruzanski, Christian A1 - Smirnova, Julia A1 - Rejzek, Martin A1 - Cockburn, Darrell A1 - Pedersen, Henriette L. A1 - Pike, Marilyn A1 - Willats, William G. T. A1 - Svensson, Birte A1 - Steup, Martin A1 - Ebenhöh, Oliver A1 - Smith, Alison M. A1 - Field, Robert A. T1 - A bacterial glucanotransferase can replace the complex maltose metabolism required for starch to sucrose conversion in leaves at night JF - The journal of biological chemistry N2 - Controlled conversion of leaf starch to sucrose at night is essential for the normal growth of Arabidopsis. The conversion involves the cytosolic metabolism of maltose to hexose phosphates via an unusual, multidomain protein with 4-glucanotransferase activity, DPE2, believed to transfer glucosyl moieties to a complex heteroglycan prior to their conversion to hexose phosphate via a cytosolic phosphorylase. The significance of this complex pathway is unclear; conversion of maltose to hexose phosphate in bacteria proceeds via a more typical 4-glucanotransferase that does not require a heteroglycan acceptor. It has recently been suggested that DPE2 generates a heterogeneous series of terminal glucan chains on the heteroglycan that acts as a glucosyl buffer to ensure a constant rate of sucrose synthesis in the leaf at night. Alternatively, DPE2 and/or the heteroglycan may have specific properties important for their function in the plant. To distinguish between these ideas, we compared the properties of DPE2 with those of the Escherichia coli glucanotransferase MalQ. We found that MalQ cannot use the plant heteroglycan as an acceptor for glucosyl transfer. However, experimental and modeling approaches suggested that it can potentially generate a glucosyl buffer between maltose and hexose phosphate because, unlike DPE2, it can generate polydisperse malto-oligosaccharides from maltose. Consistent with this suggestion, MalQ is capable of restoring an essentially wild-type phenotype when expressed in mutant Arabidopsis plants lacking DPE2. In light of these findings, we discuss the possible evolutionary origins of the complex DPE2-heteroglycan pathway. KW - Carbohydrate Metabolism KW - Computer Modeling KW - Metabolic Regulation KW - Oligosaccharide KW - Plant Biochemistry KW - Glucanotransferase KW - Leaf Cell KW - Maltose Metabolism KW - Starch Degradation Y1 - 2013 U6 - https://doi.org/10.1074/jbc.M113.497867 SN - 0021-9258 SN - 1083-351X VL - 288 IS - 40 SP - 28581 EP - 28598 PB - American Society for Biochemistry and Molecular Biology CY - Bethesda ER - TY - JOUR A1 - Leong, Jia Xuan A1 - Raffeiner, Margot A1 - Spinti, Daniela A1 - Langin, Gautier A1 - Franz-Wachtel, Mirita A1 - Guzman, Andrew R. A1 - Kim, Jung-Gun A1 - Pandey, Pooja A1 - Minina, Alyona E. A1 - Macek, Boris A1 - Hafren, Anders A1 - Bozkurt, Tolga O. A1 - Mudgett, Mary Beth A1 - Börnke, Frederik A1 - Hofius, Daniel A1 - Uestuen, Suayib T1 - A bacterial effector counteracts host autophagy by promoting degradation of an autophagy component JF - The EMBO journal N2 - Beyond its role in cellular homeostasis, autophagy plays anti- and promicrobial roles in host-microbe interactions, both in animals and plants. One prominent role of antimicrobial autophagy is to degrade intracellular pathogens or microbial molecules, in a process termed xenophagy. Consequently, microbes evolved mechanisms to hijack or modulate autophagy to escape elimination. Although well-described in animals, the extent to which xenophagy contributes to plant-bacteria interactions remains unknown. Here, we provide evidence that Xanthomonas campestris pv. vesicatoria (Xcv) suppresses host autophagy by utilizing type-III effector XopL. XopL interacts with and degrades the autophagy component SH3P2 via its E3 ligase activity to promote infection. Intriguingly, XopL is targeted for degradation by defense-related selective autophagy mediated by NBR1/Joka2, revealing a complex antagonistic interplay between XopL and the host autophagy machinery. Our results implicate plant antimicrobial autophagy in the depletion of a bacterial virulence factor and unravel an unprecedented pathogen strategy to counteract defense-related autophagy in plant-bacteria interactions. KW - autophagy KW - effectors KW - immunity KW - ubiquitination KW - xenophagy Y1 - 2022 U6 - https://doi.org/10.15252/embj.2021110352 SN - 1460-2075 VL - 41 IS - 13 PB - Wiley CY - Hoboken ER - TY - GEN A1 - Brechun, Katherine E. A1 - Woolley, Andrew A1 - Arndt, Katja Maren T1 - A Bacterial Bandpass Assay for Protein-Protein Interactions T2 - Protein science : a publication of the Protein Society Y1 - 2017 SN - 0961-8368 SN - 1469-896X VL - 26 SP - 198 EP - 198 PB - Wiley CY - Hoboken ER - TY - THES A1 - Swierczynski, Tina T1 - A 7000 yr runoff chronology from varved sediments of Lake Mondsee (Upper Austria) T1 - Eine 7000-jährige Abflusschronologie anhand von warvierten Sedimenten des Mondsees (Oberösterreich) N2 - The potential increase in frequency and magnitude of extreme floods is currently discussed in terms of global warming and the intensification of the hydrological cycle. The profound knowledge of past natural variability of floods is of utmost importance in order to assess flood risk for the future. Since instrumental flood series cover only the last ~150 years, other approaches to reconstruct historical and pre-historical flood events are needed. Annually laminated (varved) lake sediments are meaningful natural geoarchives because they provide continuous records of environmental changes > 10000 years down to a seasonal resolution. Since lake basins additionally act as natural sediment traps, the riverine sediment supply, which is preserved as detrital event layers in the lake sediments, can be used as a proxy for extreme discharge events. Within my thesis I examined a ~ 8.50 m long sedimentary record from the pre-Alpine Lake Mondsee (Northeast European Alps), which covered the last 7000 years. This sediment record consists of calcite varves and intercalated detrital layers, which range in thickness from 0.05 to 32 mm. Detrital layer deposition was analysed by a combined method of microfacies analysis via thin sections, Scanning Electron Microscopy (SEM), μX-ray fluorescence (μXRF) scanning and magnetic susceptibility. This approach allows characterizing individual detrital event layers and assigning a corresponding input mechanism and catchment. Based on varve counting and controlled by 14C age dates, the main goals of this thesis are (i) to identify seasonal runoff processes, which lead to significant sediment supply from the catchment into the lake basin and (ii) to investigate flood frequency under changing climate boundary conditions. This thesis follows a line of different time slices, presenting an integrative approach linking instrumental and historical flood data from Lake Mondsee in order to evaluate the flood record inferred from Lake Mondsee sediments. The investigation of eleven short cores covering the last 100 years reveals the abundance of 12 detrital layers. Therein, two types of detrital layers are distinguished by grain size, geochemical composition and distribution pattern within the lake basin. Detrital layers, which are enriched in siliciclastic and dolomitic material, reveal sediment supply from the Flysch sediments and Northern Calcareous Alps into the lake basin. These layers are thicker in the northern lake basin (0.1-3.9 mm) and thinner in the southern lake basin (0.05-1.6 mm). Detrital layers, which are enriched in dolomitic components forming graded detrital layers (turbidites), indicate the provenance from the Northern Calcareous Alps. These layers are generally thicker (0.65-32 mm) and are solely recorded within the southern lake basin. In comparison with instrumental data, thicker graded layers result from local debris flow events in summer, whereas thin layers are deposited during regional flood events in spring/summer. Extreme summer floods as reported from flood layer deposition are principally caused by cyclonic activity from the Mediterranean Sea, e.g. July 1954, July 1997 and August 2002. During the last two millennia, Lake Mondsee sediments reveal two significant flood intervals with decadal-scale flood episodes, during the Dark Ages Cold Period (DACP) and the transition from the Medieval Climate Anomaly (MCA) into the Little Ice Age (LIA) suggesting a linkage of transition to climate cooling and summer flood recurrences in the Northeastern Alps. In contrast, intermediate or decreased flood episodes appeared during the MWP and the LIA. This indicates a non-straightforward relationship between temperature and flood recurrence, suggesting higher cyclonic activity during climate transition in the Northeast Alps. The 7000-year flood chronology reveals 47 debris flows and 269 floods, with increased flood activity shifting around 3500 and 1500 varve yr BP (varve yr BP = varve years before present, before present = AD 1950). This significant increase in flood activity shows a coincidence with millennial-scale climate cooling that is reported from main Alpine glacier advances and lower tree lines in the European Alps since about 3300 cal. yr BP (calibrated years before present). Despite relatively low flood occurrence prior to 1500 varve yr BP, floods at Lake Mondsee could have also influenced human life in early Neolithic lake dwellings (5750-4750 cal. yr BP). While the first lake dwellings were constructed on wetlands, the later lake dwellings were built on piles in the water suggesting an early flood risk adaptation of humans and/or a general change of the Late Neolithic Culture of lake-dwellers because of socio-economic reasons. However, a direct relationship between the final abandonment of the lake dwellings and higher flood frequencies is not evidenced. N2 - Ein verstärktes Auftreten von Hochwassern, sowohl in ihrer Häufigkeit als auch in ihrer Frequenz, wird im Zuge der Klimaerwärmung und einer möglichen Intensivierung des hydrologischen Kreislaufs diskutiert. Die Kenntnis über die natürliche Variabilität von Hochwasserereignissen ist dabei eine grundlegende Voraussetzung, um die Hochwassergefahr für die Zukunft abschätzen zu können. Da instrumentelle Hochwasserzeitreihen meist nur die letzten 150 Jahre abbilden sind andere Methoden erforderlich, um das Auftreten von historischen und prä-historischen Hochwassern festzustellen. Jährlich laminierte (warvierte) Seesedimente sind bedeutende natürliche Archive, denn sie liefern kontinuierliche Zeitreihen > 10000 Jahre mit einer bis zur saisonalen Auflösung. Seebecken stellen natürliche Sedimentfallen dar, wobei eingetragenes Flusssediment in den Seesedimenten als eine distinkte detritische Lage aufgezeichnet wird, und daher zur Rekonstruktion von extremen Abflussereignissen genutzt werden. Im Rahmen meiner Doktorarbeit habe ich einen 8.50 m langen Sedimentkern aus dem Mondsee (Nordostalpen) untersucht, welcher die letzten 7000 Jahre abdeckt. Dieser Sedimentkern besteht aus Kalzitwarven und eingeschalteten detritischen Lagen mit einer Mächtigkeit von 0.05-32 mm. Detritische Lagen wurden mit Hilfe einer kombinierten Methode untersucht: Mikrofaziesanalyse, Rasterelektronenmikroskopie, Röntgenfluoreszenzanalyse (µXRF) und magnetische Suszeptibilität. Dieser Ansatz ermöglicht die Charakterisierung der einzelnen detritischen Lagen bezüglich der Eintragsprozesse und die Lokalisierung des Einzugsgebietes. Auf Grundlage der Warvenzählung und 14C Datierungen sind die wichtigsten Ziele dieser Arbeit: (i) die Identifizierung der Eintragsprozesse, welche zu einem Sedimenteintrag vom Einzugsgebiet bis in den See führen und (ii) die Rekonstruktion der Hochwasserfrequenz unter veränderten Klimabedingungen. Diese Arbeit zeigt eine Untersuchung auf verschiedenen Zeitscheiben, wobei instrumentelle und historische Daten genutzt werden, um die Aufzeichnung von pre-historischen Hochwasser in den Mondseesedimenten besser zu verstehen. Innerhalb der letzten 100 Jahre wurden zwölf Abflussereignisse aufgezeichnet. Zwei Typen von detritschen Lagen können anhand von Korngröße, geochemischer Zusammensetzung und des Verteilungsmusters unterschieden werden. Detritische Lagen, welche aus siliziklastischen und dolomitischen Material bestehen, zeigen eine Sedimentherkunft vom Teileinzugsgebiet des Flysch (nördliches Einzugsgebiet) und der Nördlichen Kalkalpen (südliches Teileinzugsgebiet) auf. Diese Lagen sind im Nördlichen Becken mächtiger (0.1-3.9 mm) als im südlichen Seebecken (0.05-1.6 mm). Detritische Lagen, welche nur aus dolomitischem Material bestehen und Turbititlagen aufzeigen (0.65-32 mm), weisen auf eine Herkunft aus den Nördlichen Kalkalpen hin. Im Vergleich mit instrumentellen Zeitreihen, stammen die mächtigeren Lagen von lokalen Murereignissen im Sommer und feinere Eintragslagen von regionalen Frühjahrs- und Sommerhochwassern. Extreme Sommerhochwasser am Mondsee werden hauptsächlich durch Zyklonen vom Mittelmeer ausgelöst, z.B. Juli 1954, Juli 1997 und August 2002. Die Untersuchung des langen Sedimentkerns vom Mondsee zeigt während der letzten 2000 Jahre signifikante Hochwasserintervalle mit dekadischen Hochwasserepisoden während der Völkerwanderungszeit und im Übergang vom Mittelalter in die Kleine Eiszeit. Dies weist auf eine Verknüpfung von Abkühlungsphasen und Sommerhochwassern im Nordostalpenraum hin. Während der Mittelalterlichen Wärmephase und in der Kleinen Eiszeit kam es jedoch zu einer geringeren Hochwasseraktivität. Dies zeigt einen komplexen Zusammenhang von Temperaturentwicklung und Hochwasseraktivität in den Nordostalpen, mit einer erhöhten Zyklonenaktivät in den Übergängen von wärmeren zu kälteren Phasen. Während der letzten 7000 Jahre wurden 47 Muren und 269 Hochwasser aufgezeichnet, wobei es eine signifikante Änderung mit erhöhter Häufigkeit um 3500 und 1500 Warvenjahre v. h. gab (v.h. = vor heute = AD 1950). Diese signifikante Änderung stimmt mit einem langfristigem Abkühlungstrend überein, welcher durch alpine Gletschervorstöße und das Absinken von Baumgrenzen seit etwa 3300 Warvenjahre v.h. berichtet wird. Trotz relativ geringer Hochwasseraktivität um 1500 Warvenjahre v.h., könnte das Auftreten von Hochwasser auch das Leben Menschen in Neolithischen Pfahlbausiedlungen (5750-4750 cal. yr BP) beeinflusst haben. Während die ersten Pfahlbauten noch als Feuchtbodensiedlungen am Land entstanden, wurden spätere Siedlungen eventuell als Anpassung an stark schwankenden Seewasserspiegeln auf Pfählen im Wasser gebaut und/oder zeigen eine allgemeine Veränderung der Siedlungsaktivitäten der Neolithischen Pfahlbaukultur an, aufgrund sozio-ökonomischer Veränderungen. Ein direkter Zusammenhang zwischen dem Verlassen der Pfahlbausiedlungen und einer erhöhten Hochwasseraktivität konnte jedoch nicht festgestellt werden. KW - Mondsee KW - Paläohochwasser KW - Seesedimente KW - Warven KW - Klimarekonstruktion KW - Mondsee KW - Paleofloods KW - Lake sediments KW - Warves KW - Climate reconstruction Y1 - 2012 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus-66702 ER - TY - JOUR A1 - Weidle, Christian A1 - Wiesenberg, Lars A1 - El-Sharkawy, Amr A1 - Krüger, Frank A1 - Scharf, Andreas A1 - Agard, Philippe A1 - Meier, Thomas T1 - A 3-D crustal shear wave velocity model and Moho map below the Semail Ophiolite, eastern Arabia JF - Geophysical journal international N2 - The Semail Ophiolite in eastern Arabia is the largest and best-exposed slice of oceanic lithosphere on land. Detailed knowledge of the tectonic evolution of the shallow crust, in particular during and after ophiolite obduction in Late Cretaceous times is contrasted by few constraints on physical and compositional properties of the middle and lower continental crust below the obducted units. The role of inherited, pre-obduction crustal architecture remains therefore unaccounted for in our understanding of crustal evolution and the present-day geology. Based on seismological data acquired during a 27-month campaign in northern Oman, Ambient Seismic Noise Tomography and Receiver Function analysis provide for the first time a 3-D radially anisotropic shear wave velocity (V-S) model and a consistent Moho map below the iconic Semail Ophiolite. The model highlights deep crustal boundaries that segment the eastern Arabian basement in two distinct units. The previously undescribed Western Jabal Akhdar Zone separates Arabian crust with typical continental properties and a thickness of similar to 40-45 km in the northwest from a compositionally different terrane in the southeast that is interpreted as a terrane accreted during the Pan-African orogeny in Neoproterozoic times. East of the Ibra Zone, another deep crustal boundary, crustal thickness decreases to 30-35 km and very high lower crustal V-S suggest large-scale mafic intrusions into, and possible underplating of the Arabian continental crust that occurred most likely during Permian breakup of Pangea. Mafic reworking is sharply bounded by the (upper crustal) Semail Gap Fault Zone, northwest of which no such high velocities are found in the crust. Topography of the Oman Mountains is supported by a mild crustal root and Moho depth below the highest topography, the Jabal Akhdar Dome, is similar to 42 km. Radial anisotropy is robustly resolved in the upper crust and aids in discriminating dipping allochthonous units from autochthonous sedimentary rocks that are indistinguishable by isotropic V-S alone. Lateral thickness variations of the ophiolite highlight the Haylayn Ophiolite Massif on the northern flank of Jabal Akhdar Dome and the Hawasina Window as the deepest reaching unit. Ophiolite thickness is similar to 10 km in the southern and northern massifs, and <= 5 km elsewhere. KW - Composition and structure of the continental crust KW - Asia KW - Body waves KW - Seismic anisotropy KW - Seismic tomography KW - Surface waves and free oscillations Y1 - 2022 U6 - https://doi.org/10.1093/gji/ggac223 SN - 0956-540X SN - 1365-246X VL - 231 IS - 2 SP - 817 EP - 834 PB - Oxford University Press CY - Oxford ER - TY - JOUR A1 - Srivastava, S. A1 - Kehrig, C. A1 - Kantharia, N. G. A1 - Pérez-Montero, E. A1 - Vílchez, J. M. A1 - Iglesias-Páramo, J. A1 - Janardhan, P. T1 - A 2D view of Wolf-Rayet Galaxies JF - Wolf-Rayet Stars : Proceedings of an International Workshop held in Potsdam, Germany, 1.–5. June 2015 N2 - The main objective of this work is to investigate the evolution of massive stars, and the interplay between them and the ionized gas for a sample of local metal-poor Wolf-Rayet galaxies. Optical integral field spectrocopy was used in combination with multi-wavelength radio data. Combining optical and radio data, we locate Wolf-Rayet stars and supernova remnants across the Wolf-Rayet galaxies to study the spatial correlation between them. This study will shed light on the massive star formation and its feedback, and will help us to better understand distant star-forming galaxies. Y1 - 2015 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-87650 SP - 59 EP - 62 ER - TY - JOUR A1 - Freybourger, Marion A1 - Krüger, Frank A1 - Achauer, Ulrich T1 - A 22 degree long seismic profile for the study of the top D" Y1 - 1999 ER - TY - JOUR A1 - Balagansky, V. V. A1 - Timmerman, Martin Jan A1 - Kozlova, N. Ye. A1 - Kisilitsyn, R. V. T1 - A 2.44 Ga old mafic dyke swarm in the Kolvitsa Belt, Kola Peninsula, Russia: implications for the early Palaeoproterozoic tectonics in the north-eastern Fennoscandian Shield Y1 - 2001 ER - TY - JOUR A1 - Wichura, Henry A1 - Jacobs, Louis L. A1 - Lin, Andrew A1 - Polcyn, Michael J. A1 - Manthi, Fredrick K. A1 - Winkler, Dale A. A1 - Strecker, Manfred A1 - Clemens, Matthew T1 - A 17-My-old whale constrains onset of uplift and climate change in east Africa JF - Proceedings of the National Academy of Sciences of the United States of America N2 - Timing and magnitude of surface uplift are key to understanding the impact of crustal deformation and topographic growth on atmospheric circulation, environmental conditions, and surface processes. Uplift of the East African Plateau is linked to mantle processes, but paleoaltimetry data are too scarce to constrain plateau evolution and subsequent vertical motions associated with rifting. Here, we assess the paleotopographic implications of a beaked whale fossil (Ziphiidae) from the Turkana region of Kenya found 740 km inland from the present-day coastline of the Indian Ocean at an elevation of 620 m. The specimen is similar to 17 My old and represents the oldest derived beaked whale known, consistent with molecular estimates of the emergence of modern straptoothed whales (Mesoplodon). The whale traveled from the Indian Ocean inland along an eastward-directed drainage system controlled by the Cretaceous Anza Graben and was stranded slightly above sea level. Surface uplift from near sea level coincides with paleoclimatic change from a humid environment to highly variable and much drier conditions, which altered biotic communities and drove evolution in east Africa, including that of primates. KW - east Africa KW - Ziphiidae KW - uplift KW - drainage KW - paleoenvironment Y1 - 2015 U6 - https://doi.org/10.1073/pnas.1421502112 SN - 0027-8424 VL - 112 IS - 13 SP - 3910 EP - 3915 PB - National Acad. of Sciences CY - Washington ER - TY - JOUR A1 - Isaeva, Olga B. A1 - Kuznetsov, Sergey P. A1 - Sataev, Igor R. T1 - A "saddle-node" bifurcation scenario for birth or destruction of a Smale-Williams solenoid JF - Chaos : an interdisciplinary journal of nonlinear science N2 - Formation or destruction of hyperbolic chaotic attractor under parameter variation is considered with an example represented by Smale-Williams solenoid in stroboscopic Poincare map of two alternately excited non-autonomous van der Pol oscillators. The transition occupies a narrow but finite parameter interval and progresses in such way that periodic orbits constituting a "skeleton" of the attractor undergo saddle-node bifurcation events involving partner orbits from the attractor and from a non-attracting invariant set, which forms together with its stable manifold a basin boundary of the attractor. Y1 - 2012 U6 - https://doi.org/10.1063/1.4766590 SN - 1054-1500 VL - 22 IS - 4 PB - American Institute of Physics CY - Melville ER - TY - JOUR A1 - Gruden, Kristina A1 - Hren, Matjaz A1 - Herman, Ana A1 - Blejec, Andrej A1 - Albrecht, Tanja A1 - Selbig, Joachim A1 - Bauer, Christian G. A1 - Schuchardt, Johannes A1 - Or-Guil, Michal A1 - Zupancic, Klemen A1 - Svajger, Urban A1 - Stabuc, Borut A1 - Ihan, Alojz A1 - Kopitar, Andreja Natasa A1 - Ravnikar, Maja A1 - Knezevic, Miomir A1 - Rozman, Primoz A1 - Jeras, Matjaz T1 - A "Crossomics" study analysing variability of different components in peripheral blood of healthy caucasoid individuals JF - PLoS one N2 - Background: Different immunotherapy approaches for the treatment of cancer and autoimmune diseases are being developed and tested in clinical studies worldwide. Their resulting complex experimental data should be properly evaluated, therefore reliable normal healthy control baseline values are indispensable. Methodology/Principal Findings: To assess intra- and inter-individual variability of various biomarkers, peripheral blood of 16 age and gender equilibrated healthy volunteers was sampled on 3 different days within a period of one month. Complex "crossomics'' analyses of plasma metabolite profiles, antibody concentrations and lymphocyte subset counts as well as whole genome expression profiling in CD4(+)T and NK cells were performed. Some of the observed age, gender and BMI dependences are in agreement with the existing knowledge, like negative correlation between sex hormone levels and age or BMI related increase in lipids and soluble sugars. Thus we can assume that the distribution of all 39.743 analysed markers is well representing the normal Caucasoid population. All lymphocyte subsets, 20% of metabolites and less than 10% of genes, were identified as highly variable in our dataset. Conclusions/Significance: Our study shows that the intra- individual variability was at least two-fold lower compared to the inter-individual one at all investigated levels, showing the importance of personalised medicine approach from yet another perspective. Y1 - 2012 U6 - https://doi.org/10.1371/journal.pone.0028761 SN - 1932-6203 VL - 7 IS - 1 PB - PLoS CY - San Fransisco ER - TY - JOUR A1 - Kimmerle, Christoph T1 - `Geschlecht` als eine zentrale Grundbegrifflichkeit der Psychologie(n) : zwischen Affirmation und Kritik gesellschaftlicher Differenzierung, Normierung und Hierarchisierung Y1 - 2002 SN - 3-89771-413-2 ER -