TY - JOUR A1 - Sommer, Ulrich A1 - Adrian, Rita A1 - Domis, Lisette Nicole de Senerpont A1 - Elser, James J. A1 - Gaedke, Ursula A1 - Ibelings, Bas A1 - Jeppesen, Erik A1 - Lurling, Miquel A1 - Molinero, Juan Carlos A1 - Mooij, Wolf M. A1 - van Donk, Ellen A1 - Winder, Monika ED - Futuyma, DJ T1 - Beyond the Plankton Ecology Group (PEG) Model mechanisms driving plankton succession JF - Annual review of ecology, evolution, and systematics JF - Annual Review of Ecology Evolution and Systematics N2 - The seasonal succession of plankton is an annually repeated process of community assembly during which all major external factors and internal interactions shaping communities can be studied. A quarter of a century ago, the state of this understanding was described by the verbal plankton ecology group (PEG) model. It emphasized the role of physical factors, grazing and nutrient limitation for phytoplankton, and the role of food limitation and fish predation for zooplankton. Although originally targeted at lake ecosystems, it was also adopted by marine plankton ecologists. Since then, a suite of ecological interactions previously underestimated in importance have become research foci: overwintering of key organisms, the microbial food web, parasitism, and food quality as a limiting factor and an extended role of higher order predators. A review of the impact of these novel interactions on plankton seasonal succession reveals limited effects on gross seasonal biomass patterns, but strong effects on species replacements. KW - lakes KW - oceans KW - seasonal patterns KW - pelagic zone KW - light KW - overwintering KW - grazing KW - parasitism KW - food quality Y1 - 2012 SN - 978-0-8243-1443-9 U6 - https://doi.org/10.1146/annurev-ecolsys-110411-160251 SN - 1543-592X VL - 43 IS - 2-4 SP - 429 EP - 448 PB - Annual Reviews CY - Palo Alto ER - TY - JOUR A1 - Hartwich, Melanie A1 - Straile, Dietmar A1 - Gaedke, Ursula A1 - Wacker, Alexander T1 - Use of ciliate and phytoplankton taxonomic composition for the estimation of eicosapentaenoic acid concentration in lakes JF - Freshwater biology N2 - 1. The polyunsaturated fatty acid eicosapentaenoic acid (EPA) plays an important role in aquatic food webs, in particular at the primary producerconsumer interface where keystone species such as daphnids may be constrained by its dietary availability. Such constraints and their seasonal and interannual changes may be detected by continuous measurements of EPA concentrations. However, such EPA measurements became common only during the last two decades, whereas long-term data sets on plankton biomass are available for many well-studied lakes. Here, we test whether it is possible to estimate EPA concentrations from abiotic variables (light and temperature) and the biomass of prey organisms (e.g. ciliates, diatoms and cryptophytes) that potentially provide EPA for consumers. 2. We used multiple linear regression to relate size- and taxonomically resolved plankton biomass data and measurements of temperature and light intensity to directly measured EPA concentrations in Lake Constance during a whole year. First, we tested the predictability of EPA concentrations from the biomass of EPA-rich organisms (diatoms, cryptophytes and ciliates). Secondly, we included the variables mean temperature and mean light intensity over the sampling depth (020 m) and depth (08 and 820 m) as factors in our model to check for large-scale seasonal- and depth-dependent effects on EPA concentrations. In a third step, we included the deviations of light and temperature from mean values in our model to allow for their potential influence on the biochemical composition of plankton organisms. We used the Akaike Information Criterion to determine the best models. 3. All approaches supported our proposition that the biomasses of specific plankton groups are variables from which seston EPA concentrations can be derived. The importance of ciliates as an EPA source in the seston was emphasised by their high weight in our models, although ciliates are neglected in most studies that link fatty acids to seston taxonomic composition. The large-scale seasonal variability of light intensity and its interaction with diatom biomass were significant predictors of EPA concentrations. The deviation of temperature from mean values, accounting for a depth-dependent effect on EPA concentrations, and its interaction with ciliate biomass were also variables with high predictive power. 4. The best models from the first and second approaches were validated with measurements of EPA concentrations from another year (1997). The estimation with the best model including only biomass explained 80%, and the best model from the second approach including mean temperature and depth explained 87% of the variability in EPA concentrations in 1997. 5. We show that it is possible to predict EPA concentrations reliably from plankton biomass, while the inclusion of abiotic factors led to results that were only partly consistent with expectations from laboratory studies. Our approach of including biotic predictors should be transferable to other systems and allow checking for biochemical constraints on primary consumers. KW - ciliates KW - diatoms KW - eicosapentaenoic acid KW - light KW - temperature Y1 - 2012 U6 - https://doi.org/10.1111/j.1365-2427.2012.02799.x SN - 0046-5070 VL - 57 IS - 7 SP - 1385 EP - 1398 PB - Wiley-Blackwell CY - Hoboken ER - TY - JOUR A1 - Piepho, Maike A1 - Arts, Michael T. A1 - Wacker, Alexander T1 - Species-specific variation in fatty acid concentrations of four phytoplankton species does phosphorus supply influence the effect of light intensity of temperature? JF - Journal of phycology N2 - We tested, in the laboratory, the influence of light intensity, temperature, and phosphorus (P) supply on fatty acid (FA) concentrations of four freshwater algae: the green algae Scenedesmus quadricauda (Turpin) Breb. and Chlamydomonas globosa J. Snow, the cryptophyte Cryptomonas ovata Ehrenb., and the diatom Cyclotella meneghiniana Kutz. We investigated the main and interactive effects of two variables on algal FA concentrations (i.e., light intensity and P supply or temperature and P supply). Interactive effects of light intensity and P supply were most pronounced in C. meneghiniana, but were also found in S. quadricauda and C. ovata. Changes in several saturated and unsaturated FA concentrations with light were more distinct in the low-P treatments than in the high-P treatments. Interactive effects of temperature and P supply on various FA concentrations were observed in all four species, but there was no consistent pattern. In lake ecosystems, P limitation often coincides with high light intensities and temperatures in summer. Therefore, it is important to examine how combinations of these environmental conditions affect FA concentrations of primary producers that are important sources of FAs for higher trophic levels. KW - Chlamydomonas KW - Cryptomonas KW - Cyclotella KW - fatty acids KW - light KW - lipids KW - phosphate KW - PUFA KW - Scenedesmus KW - temperature Y1 - 2012 U6 - https://doi.org/10.1111/j.1529-8817.2011.01103.x SN - 0022-3646 VL - 48 IS - 1 SP - 64 EP - 73 PB - Wiley-Blackwell CY - Malden ER - TY - GEN A1 - McQuade, D. Tyler A1 - O'Brien, Alexander G. A1 - Dörr, Markus A1 - Rajaratnam, Rajathees A1 - Eisold, Ursula A1 - Monnanda, Bopanna A1 - Nobuta, Tomoya A1 - Löhmannsröben, Hans-Gerd A1 - Meggers, Eric A1 - Seeberger, Peter H. T1 - Continuous synthesis of pyridocarbazoles and initial photophysical and bioprobe characterization N2 - Pyridocarbazoles when ligated to transition metals yield high affinity kinase inhibitors. While batch photocyclizations enable the synthesis of these heterocycles, the non-oxidative Mallory reaction only provides modest yields and difficult to purify mixtures. We demonstrate here that a flow-based Mallory cyclization provides superior results and enables observation of a clear isobestic point. The flow method allowed us to rapidly synthesize ten pyridocarbazoles and for the first time to document their interesting photophysical attributes. Preliminary characterization reveals that these molecules might be a new class of fluorescent bioprobe. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 246 KW - protein-kinase inhibitors KW - continuous-flow KW - photochemical synthesis KW - light KW - efficient KW - phenanthrenes KW - complexes Y1 - 2013 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-95214 SP - 4067 EP - 4070 ER - TY - THES A1 - Georgiev, Vasil T1 - Light-induced transformations in biomembranes T1 - Lichtinduzierte Transformationen in Biomembranen N2 - Cellular membranes constantly experience remodeling, as exemplified by morphological changes during endo- and exocytosis. Regulation of membrane morphology is essential for these processes. In this work, we attempt to establish a regulation path based on the use of photoswitches exhibiting conformational changes in model membranes, namely, giant unilamellar vesicles (GUVs). The mechanism of the changes in the GUVs’ morphology caused by isomerization of the photosensitive molecules has been previously explored but still remains elusive. We examine the morphological reshaping of GUVs in the presence of the photoswitch o-tetrafluoroazobenzene (F-azo) and show that the mechanism behind the resulting morphological changes involves both an increase in the membrane area and generation of a positive spontaneous curvature. First, we characterize the partitioning of F-azo in a single-component membrane using both experimental and computational approaches. The partition coefficient calculated from molecular dynamic simulations agrees with experimental data obtained with size-exclusion chromatography. Then, we implement the approach of vesicle electrodeformation in order to assess the increase in the membrane area, which is observed as a result of the conformational change of F-azo. Finally, the local and the effective membrane spontaneous curvatures were estimated from the observed shapes of vesicles exhibiting outward budding. We then extend the application of the F-azo to multicomponent lipid membranes, which exhibit a coexistence of domains in different liquid phases due to a miscibility gap between the lipids. We perform initial experiments to investigate whether F-azo can be employed to modulate the lateral lipid packing and organization. We observe either complete mixing of the domains or the appearing of disordered domains within the domains of more ordered phase. The type of behavior observed in response to the photoisomerization of F-azo was dependent on the used lipid composition. We believe that the findings introduced here will have an impact in understanding and controlling both lipid phase modulation and regulation of the membrane morphology in membrane systems. N2 - Zelluläre Membranen durchlaufen ständige Formveränderungen wie zum Beispiel bei der Endo- und Exozytose. Für diese und andere Prozesse ist eine Regulierung der Membranmorphologie notwendig. In der vorliegenden Arbeit wurden riesen unilamellare Vesikel (giant unilamellar vesicles, GUVs) als Modelmembranen genutzt. Änderungen der Vesikelform wurde durch lichtschaltbare Moleküle (Fotoschalter) erzielt. Dass die Isomerisierung von lichtempfindlichen Molekülen eine Verformung von GUV ermöglichen kann, war bekannt. Jedoch war der zugrunde liegende Mechanismus unklar. In dieser Arbeit wurde zur Untersuchung dieses Mechanismus o-Tetrafluoroazobenzol (F-azo) als Fotoschalter verwendet. Damit konnte gezeigt werden, dass sowohl eine Vergrößerung der Membranfläche als auch das Entstehen einer positiven, spontanen Membrankrümmung den morphologischen Veränderungen zu Grunde liegen. Durch experimentelle und computergestützte Methoden konnte zunächst die Verteilung von F-azo in Membranen, die aus nur einer Komponente bestehen, quantifiziert werden. Der Verteilungskoeffizient aus molekular-dynamik Simulationen stimmte dabei mit den experimentellen Daten aus der Größenausschluss-Chromatographie überein. Im Anschluss bestimmten wir die Änderung der Membranfläche mit Hilfe von GUV-Verformung durch elektrische Felder, und konnten die Veränderung der lokalen und effektiven spontanen Membrankrümmung durch Beobachtung der Vesikelformen abschätzen. Um herauszufinden ob F-azo die laterale Verdichtung und Organisation von Membranlipiden moduliert, weitteten wir die Experimente auf mehr-komponenten Membranen aus. Diese sind durch die Koexistenz von Domänen zweier flüssiger Lipid-Phasen gekennzeichnet. Wir konnten sowohl das Auftreten von Domänen ungeordneter Lipidphasen in geordneten Lipidphasen beobachten, als auch die Entstehung homogener GUVs durch komplette Mischung beider Lipidphasen. Wir konnten zeigen, dass die unterschiedliche Beeinflussung der Domänen durch die Licht-induzierte Isomerisierung von F-azo dabei von der Zusammensetzung der Membranen abhängig ist. Mit den hier beschriebenen Ergebnissen legen wir einen Grundstein, für die lichtinduzierte Kontrolle über Membranenmorphologien sowie für die Foto-Modulation von Lipidphasen. KW - giant unilamellar vesicles KW - morphological changes KW - light KW - photoswitches KW - riesen unilamellare Vesikel KW - morphologischen Veränderungen KW - Licht KW - Fotoschalter Y1 - 2017 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-395309 ER - TY - GEN A1 - Fabian, Jenny A1 - Zlatanović, Sanja A1 - Mutz, Michael A1 - Grossart, Hans-Peter A1 - Geldern, Robert van A1 - Ulrich, Andreas A1 - Gleixner, Gerd A1 - Premke, Katrin T1 - Environmental control on microbial turnover of leaf carbon in streams BT - ecological function of phototrophic-heterotrophic interactions T2 - Postprints der Universität Potsdam Mathematisch-Naturwissenschaftliche Reihe N2 - In aquatic ecosystems, light availability can significantly influence microbial turnover of terrestrial organic matter through associated metabolic interactions between phototrophic and heterotrophic communities. However, particularly in streams, microbial functions vary significantly with the structure of the streambed, that is the distribution and spatial arrangement of sediment grains in the streambed. It is therefore essential to elucidate how environmental factors synergistically define the microbial turnover of terrestrial organic matter in order to better understand the ecological role of photo-heterotrophic interactions in stream ecosystem processes. In outdoor experimental streams, we examined how the structure of streambeds modifies the influence of light availability on microbial turnover of leaf carbon (C). Furthermore, we investigated whether the studied relationships of microbial leaf C turnover to environmental conditions are affected by flow intermittency commonly occurring in streams. We applied leaves enriched with a 13C-stable isotope tracer and combined quantitative and isotope analyses. We thereby elucidated whether treatment induced changes in C turnover were associated with altered use of leaf C within the microbial food web. Moreover, isotope analyses were combined with measurements of microbial community composition to determine whether changes in community function were associated with a change in community composition. In this study, we present evidence, that environmental factors interactively determine how phototrophs and heterotrophs contribute to leaf C turnover. Light availability promoted the utilization of leaf C within the microbial food web, which was likely associated with a promoted availability of highly bioavailable metabolites of phototrophic origin. However, our results additionally confirm that the structure of the streambed modifies light-related changes in microbial C turnover. From our observations, we conclude that the streambed structure influences the strength of photo-heterotrophic interactions by defining the spatial availability of algal metabolites in the streambed and the composition of microbial communities. Collectively, our multifactorial approach provides valuable insights into environmental controls on the functioning of stream ecosystems. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 693 KW - algae KW - bacteria KW - microbial interactions KW - 13C stable isotopes KW - PLFA KW - terrestrial carbon KW - streambed structure KW - light Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-426336 SN - 1866-8372 IS - 693 ER - TY - JOUR A1 - Fabian, Jenny A1 - Zlatanovic, Sanja A1 - Mutz, Michael A1 - Grossart, Hans-Peter A1 - van Geldern, Robert A1 - Ulrich, Andreas A1 - Gleixner, Gerd A1 - Premke, Katrin T1 - Environmental control on microbial turnover of leaf carbon in streams BT - Ecological function of phototrophic-heterotrophic interactions JF - Frontiers in microbiology N2 - In aquatic ecosystems, light availability can significantly influence microbial turnover of terrestrial organic matter through associated metabolic interactions between phototrophic and heterotrophic communities. However, particularly in streams, microbial functions vary significantly with the structure of the streambed, that is the distribution and spatial arrangement of sediment grains in the streambed. It is therefore essential to elucidate how environmental factors synergistically define the microbial turnover of terrestrial organic matter in order to better understand the ecological role of photoheterotrophic interactions in stream ecosystem processes. In outdoor experimental streams, we examined how the structure of streambeds modifies the influence of light availability on microbial turnover of leaf carbon (C). Furthermore, we investigated whether the studied relationships of microbial leaf C turnover to environmental conditions are affected by flow intermittency commonly occurring in streams. We applied leaves enriched with a C-13-stable isotope tracer and combined quantitative and isotope analyses. We thereby elucidated whether treatment induced changes in C turnover were associated with altered use of leaf C within the microbial food web. Moreover, isotope analyses were combined with measurements of microbial community composition to determine whether changes in community function were associated with a change in community composition. In this study, we present evidence, that environmental factors interactively determine how phototrophs and heterotrophs contribute to leaf C turnover. Light availability promoted the utilization of leaf C within the microbial food web, which was likely associated with a promoted availability of highly bioavailable metabolites of phototrophic origin. However, our results additionally confirm that the structure of the streambed modifies light-related changes in microbial C turnover. From our observations, we conclude that the streambed structure influences the strength of photo-heterotrophic interactions by defining the spatial availability of algal metabolites in the streambed and the composition of microbial communities. Collectively, our multifactorial approach provides valuable insights into environmental controls on the functioning of stream ecosystems. KW - algae KW - bacteria KW - microbial interactions KW - C-13 stable isotopes KW - PLFA KW - terrestrial carbon KW - streambed structure KW - light Y1 - 2018 U6 - https://doi.org/10.3389/fmicb.2018.01044 SN - 1664-302X VL - 9 PB - Frontiers Research Foundation CY - Lausanne ER - TY - JOUR A1 - Hartlieb, Matthias T1 - Photo-iniferter RAFT polymerization JF - Macromolecular rapid communications : publishing the newsletters of the European Polymer Federation N2 - Light-mediated polymerization techniques offer distinct advantages over polymerization reactions fueled by thermal energy, such as high spatial and temporal control as well as the possibility to work under mild reaction conditions. Reversible addition-fragmentation chain-transfer (RAFT) polymerization is a highly versatile radical polymerization method that can be utilized to control a variety of monomers and produce a vast number of complex macromolecular structures. The use of light to drive a RAFT-polymerization is possible via multiple routes. Besides the use of photo-initiators, or photo-catalysts, the direct activation of the chain transfer agent controlling the RAFT process in a photo-iniferter (PI) process is an elegant way to initiate and control polymerization reactions. Within this review, PI-RAFT polymerization and its advantages over the conventional RAFT process are discussed in detail. KW - light KW - photo-iniferter reversible addition-fragmentation chain-transfer KW - photo-mediated polymerization KW - radical polymerization KW - reversible KW - addition-fragmentation chain-transfer polymerization Y1 - 2021 U6 - https://doi.org/10.1002/marc.202100514 SN - 1521-3927 VL - 43 IS - 1 PB - Wiley-VCH CY - Weinheim ER -