TY - JOUR A1 - Schmidt, Bernd A1 - Hauke, Sylvia T1 - Olefin cross metathesis based de novo synthesis of a partially protected L-amicetose and a fully protected L-cinerulose derivative JF - Beilstein journal of organic chemistry N2 - Cross metathesis of a lactate derived allylic alcohol and acrolein is the entry point to a de novo synthesis of 4-benzoate protected L-amicetose and a cinerulose derivative protected at C5 and C1. KW - carbohydrates KW - de novo synthesis KW - lactate KW - metathesis KW - ruthenium Y1 - 2014 U6 - https://doi.org/10.3762/bjoc.10.102 SN - 1860-5397 VL - 10 SP - 1023 EP - 1031 PB - Beilstein-Institut zur Förderung der Chemischen Wissenschaften CY - Frankfurt, Main ER - TY - JOUR A1 - Salama, Ahmed A1 - Neumann, Mike A1 - Günter, Christina A1 - Taubert, Andreas T1 - Ionic liquid-assisted formation of cellulose/calcium phosphate hybrid materials JF - Beilstein journal of nanotechnology N2 - Cellulose/calcium phosphate hybrid materials were synthesized via an ionic liquid-assisted route. Scanning electron microscopy, transmission electron microscopy, energy-dispersive X-ray spectroscopy, X-ray diffraction, infrared spectroscopy, and thermogravimetric analysis/differential thermal analysis show that, depending on the reaction conditions, cellulose/hydroxyapatite, cellulose/ chlorapatite, or cellulose/monetite composites form. Preliminary studies with MC3T3-E1 pre-osteoblasts show that the cells proliferate on the hybrid materials suggesting that the ionic liquid-based process yields materials that are potentially useful as scaffolds for regenerative therapies. KW - biomineralization KW - calcium phosphate KW - carbohydrates KW - cellulose KW - hybrid materials KW - ionic liquid Y1 - 2014 U6 - https://doi.org/10.3762/bjnano.5.167 SN - 2190-4286 VL - 5 SP - 1553 EP - 1568 PB - Beilstein-Institut zur Förderung der Chemischen Wissenschaften CY - Frankfurt, Main ER - TY - JOUR A1 - Umbreen, Sumaira A1 - Linker, Torsten T1 - Simple Synthesis of Conformationally Fixed Glycosamine Analogues by Beckmann Rearrangement at the Carbohydrate Ring JF - Chemistry - a European journal N2 - Conformationally fixed carbohydrate analogues are promising small-molecule inhibitors for hydrolases like O-GlcNAcase (OGA); however, their synthesis usually requires many steps. Herein we describe cycloadditions of dichloroketene to various glycals and subsequent Beckmann rearrangements, which offer an easy and stereoselective entry to glycosamine derivatives in good yields. The reactions are applicable for hexoses, pentoses, and disaccharides, and transformations to the corresponding imidates proceed smoothly. First biological tests reveal that such imidates indeed inhibit human OGA. KW - carbohydrates KW - cycloaddition KW - enzyme inhibitors KW - rearrangement KW - selective syntheses Y1 - 2015 U6 - https://doi.org/10.1002/chem.201406546 SN - 0947-6539 SN - 1521-3765 VL - 21 IS - 20 SP - 7340 EP - 7344 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Senf, Deborah A1 - Ruprecht, Colin A1 - Kishani, Saina A1 - Matic, Aleksandar A1 - Toriz, Guillermo A1 - Gatenholm, Paul A1 - Wagberg, Lars A1 - Pfrengle, Fabian T1 - Tailormade polysaccharides with defined branching patterns BT - Enzymatic polymerization of arabinoxylan oligosaccharides JF - Angewandte Chemie : a journal of the Gesellschaft Deutscher Chemiker ; International edition N2 - The heterogeneous nature of non-cellulosic polysaccharides, such as arabinoxylan, makes it difficult to correlate molecular structure with macroscopic properties. To study the impact of specific structural features of the polysaccharides on crystallinity or affinity to other cell wall components, collections of polysaccharides with defined repeating units are required. Herein, a chemoenzymatic approach to artificial arabinoxylan polysaccharides with systematically altered branching patterns is described. The polysaccharides were obtained by glycosynthase-catalyzed polymerization of glycosyl fluorides derived from arabinoxylan oligosaccharides. X-ray diffraction and adsorption experiments on cellulosic surfaces revealed that the physicochemical properties of the synthetic polysaccharides strongly depend on the specific nature of their substitution patterns. The artificial polysaccharides allow structure-property relationship studies that are not accessible by other means. KW - carbohydrates KW - enzymes KW - glycosynthases KW - structure elucidation KW - synthetic methods Y1 - 2018 U6 - https://doi.org/10.1002/anie.201806871 SN - 1433-7851 SN - 1521-3773 VL - 57 IS - 37 SP - 11987 EP - 11992 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Linker, Torsten T1 - Addition of Heteroatom Radicals to endo-Glycals JF - Chemistry N2 - Radical reactions have found many applications in carbohydrate chemistry, especially in the construction of carbon–carbon bonds. The formation of carbon–heteroatom bonds has been less intensively studied. This mini-review will summarize the efforts to add heteroatom radicals to unsaturated carbohydrates like endo-glycals. Starting from early examples, developed more than 50 years ago, the importance of such reactions for carbohydrate chemistry and recent applications will be discussed. After a short introduction, the mini-review is divided in sub-chapters according to the heteroatoms halogen, nitrogen, phosphorus, and sulfur. The mechanisms of radical generation by chemical or photochemical processes and the subsequent reactions of the radicals at the 1-position will be discussed. This mini-review cannot cover all aspects of heteroatom-centered radicals in carbohydrate chemistry, but should provide an overview of the various strategies and future perspectives KW - radicals KW - carbohydrates KW - heteroatoms KW - synthesis Y1 - 2020 U6 - https://doi.org/10.3390/chemistry2010008 SN - 2624-8549 VL - 2 IS - 1 SP - 80 EP - 92 PB - MDPI CY - Basel ER - TY - JOUR A1 - Kunstmann, Ruth Sonja A1 - Engström, Olof A1 - Wehle, Marko A1 - Widmalm, Göran A1 - Santer, Mark A1 - Barbirz, Stefanie T1 - Increasing the affinity of an O-Antigen polysaccharide binding site in Shigella flexneri bacteriophage Sf6 tailspike protein JF - Chemistry – A European Journal N2 - Broad and unspecific use of antibiotics accelerates spread of resistances. Sensitive and robust pathogen detection is thus important for a more targeted application. Bacteriophages contain a large repertoire of pathogen-binding proteins. These tailspike proteins (TSP) often bind surface glycans and represent a promising design platform for specific pathogen sensors. We analysed bacteriophage Sf6 TSP that recognizes the O-polysaccharide of dysentery-causing Shigella flexneri to develop variants with increased sensitivity for sensor applications. Ligand polyrhamnose backbone conformations were obtained from 2D H-1,H-1-trNOESY NMR utilizing methine-methine and methine-methyl correlations. They agreed well with conformations obtained from molecular dynamics (MD), validating the method for further predictions. In a set of mutants, MD predicted ligand flexibilities that were in good correlation with binding strength as confirmed on immobilized S. flexneri O-polysaccharide (PS) with surface plasmon resonance. In silico approaches combined with rapid screening on PS surfaces hence provide valuable strategies for TSP-based pathogen sensor design. KW - carbohydrates KW - molecular dynamics simulations KW - NMR spectroscopy KW - protein-carbohydrate interactions KW - surface plasmon resonance Y1 - 2020 U6 - https://doi.org/10.1002/chem.202000495 SN - 0947-6539 SN - 1521-3765 VL - 26 IS - 32 SP - 7263 EP - 7273 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Bauch, Marcel A1 - Fudickar, Werner A1 - Linker, Torsten T1 - Stereoselective [4+2] Cycloaddition of Singlet Oxygen to Naphthalenes Controlled by Carbohydrates JF - Molecules : a journal of synthetic chemistry and natural product chemistry N2 - Stereoselective reactions of singlet oxygen are of current interest. Since enantioselective photooxygenations have not been realized efficiently, auxiliary control is an attractive alternative. However, the obtained peroxides are often too labile for isolation or further transformations into enantiomerically pure products. Herein, we describe the oxidation of naphthalenes by singlet oxygen, where the face selectivity is controlled by carbohydrates for the first time. The synthesis of the precursors is easily achieved starting from naphthoquinone and a protected glucose derivative in only two steps. Photooxygenations proceed smoothly at low temperature, and we detected the corresponding endoperoxides as sole products by NMR. They are labile and can thermally react back to the parent naphthalenes and singlet oxygen. However, we could isolate and characterize two enantiomerically pure peroxides, which are sufficiently stable at room temperature. An interesting influence of substituents on the stereoselectivities of the photooxygenations has been found, ranging from 51:49 to up to 91:9 dr (diastereomeric ratio). We explain this by a hindered rotation of the carbohydrate substituents, substantiated by a combination of NOESY measurements and theoretical calculations. Finally, we could transfer the chiral information from a pure endoperoxide to an epoxide, which was isolated after cleavage of the sugar chiral auxiliary in enantiomerically pure form. KW - singlet oxygen KW - photooxygenation KW - naphthalenes KW - carbohydrates KW - stereoselectivity KW - auxiliary control KW - [4+2] cycloaddition Y1 - 2021 U6 - https://doi.org/10.3390/molecules26040804 SN - 1420-3049 VL - 16 IS - 4 PB - MDPI CY - Basel ER -