@article{ShenarRichardsonSablowskietal.2017, author = {Shenar, Tomer and Richardson, N. D. and Sablowski, Daniel P. and Hainich, Rainer and Sana, H. and Moffat, A. F. J. and Todt, Helge Tobias and Hamann, Wolf-Rainer and Oskinova, Lidia M. and Sander, Andreas Alexander Christoph and Tramper, Frank and Langer, Norbert and Bonanos, Alceste Z. and de Mink, Selma E. and Gr{\"a}fener, G. and Crowther, Paul and Vink, J. S. and Almeida, Leonardo A. and de Koter, A. and Barb{\´a}, Rodolfo and Herrero, A. and Ulaczyk, Krzysztof}, title = {The tarantula massive binary monitoring}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {598}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201629621}, pages = {16}, year = {2017}, abstract = {We present the first SB2 orbital solution and disentanglement of the massive Wolf-Rayet binary R145 (P = 159 d) located in the Large Magellanic Cloud. The primary was claimed to have a stellar mass greater than 300 M-circle dot, making it a candidate for being the most massive star known to date. While the primary is a known late-type, H-rich Wolf-Rayet star (WN6h), the secondary has so far not been unambiguously detected. Using moderate-resolution spectra, we are able to derive accurate radial velocities for both components. By performing simultaneous orbital and polarimetric analyses, we derive the complete set of orbital parameters, including the inclination. The spectra are disentangled and spectroscopically analyzed, and an analysis of the wind-wind collision zone is conducted. The disentangled spectra and our models are consistent with a WN6h type for the primary and suggest that the secondary is an O3.5 If*/WN7 type star. We derive a high eccentricity of e = 0 : 78 and minimum masses of M-1 sin(3) i approximate to M-2 sin(3) i = 13 +/- 2 M-circle dot, with q = M-2/M-1 = 1.01 +/- 0.07. An analysis of emission excess stemming from a wind-wind collision yields an inclination similar to that obtained from polarimetry (i = 39 +/- 6 degrees). Our analysis thus implies M-1 = 53(-20)(+40) and M2 = 54(-20)(+40) M-circle dot, excluding M-1 > 300 M-circle dot. A detailed comparison with evolution tracks calculated for single and binary stars together with the high eccentricity suggests that the components of the system underwent quasi-homogeneous evolution and avoided mass-transfer. This scenario would suggest current masses of approximate to 80 M-circle dot and initial masses of M-i,M-1 approximate to 10(5) and M-i,M-2 approximate to 90 M-circle dot, consistent with the upper limits of our derived orbital masses, and would imply an age of approximate to 2.2 Myr.}, language = {en} } @article{ShenarOskinovaJaervinenetal.2017, author = {Shenar, Tomer and Oskinova, Lidia M. and Jaervinen, S. P. and Luckas, P. and Hainich, Rainer and Todt, Helge Tobias and Hubrig, Swetlana and Sander, Andreas Alexander Christoph and Ilyin, Ilya and Hamann, Wolf-Rainer}, title = {Constraining the weak-wind problem}, series = {Contributions Of The Astronomical Observatory Skalnate Pleso}, volume = {48}, journal = {Contributions Of The Astronomical Observatory Skalnate Pleso}, number = {1}, publisher = {Astronomick{\´y} {\´U}stav SAV}, address = {Tatransk{\´a} Lomnica}, issn = {1335-1842}, doi = {10.1051/0004-6361/201731291}, pages = {139 -- 143}, year = {2017}, abstract = {Mass-loss rates of massive, late type main sequence stars are much weaker than currently predicted, but their true values are very difficult to measure. We suggest that confined stellar winds of magnetic stars can be exploited to constrain the true mass-loss rates M of massive main sequence stars. We acquired UV, X-ray, and optical amateur data of HD 54879 (09.7 V), one of a few O-type stars with a detected atmospheric magnetic field (B-d greater than or similar to 2 kG). We analyze these data with the Potsdam Wolf-Rayet (PoWR) and XSPEC codes. We can roughly estimate the mass-loss rate the star would have in the absence of a magnetic field as log M-B=0 approximate to -9.0 M-circle dot yr(-1). Since the wind is partially trapped within the Alfven radius rA greater than or similar to 12 R-*,, the true mass-loss rate of HD 54879 is log M less than or similar to -10.2 M-circle dot yr(-1). Moreover, we find that the microturbulent, macroturbulent, and projected rotational velocities are lower than previously suggested (< 4 km s(-1)). An initial mass of 16 M-circle dot and an age of 5 Myr are inferred. We derive a mean X-ray emitting temperature of log T-x = 6.7 K and an X-ray luminosity of log L-x = 32 erg s(-1). The latter implies a significant X-ray excess (log L-x/L-Bol approximate to - 6.0), most likely stemming from collisions at the magnetic equator. A tentative period of P approximate to 5 yr is derived from variability of the Ha line. Our study confirms that strongly magnetized stars lose little or no mass, and supplies important constraints on the weak-wind problem of massive main sequence stars.}, language = {en} } @article{OskinovaHuenemoerderHamannetal.2017, author = {Oskinova, Lidia M. and Huenemoerder, D. P. and Hamann, Wolf-Rainer and Shenar, Tomer and Sander, Andreas Alexander Christoph and Ignace, R. and Todt, Helge Tobias and Hainich, Rainer}, title = {On the Binary Nature of Massive Blue Hypergiants: High-resolution X-Ray Spectroscopy Suggests That Cyg OB2 12 is a Colliding Wind Binary}, series = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, volume = {845}, journal = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {0004-637X}, doi = {10.3847/1538-4357/aa7e79}, pages = {11}, year = {2017}, abstract = {The blue hypergiant Cyg OB2 12 (B3Ia(+)) is a representative member of the class of very massive stars in a poorly understood evolutionary stage. We obtained its high-resolution X-ray spectrum using the Chandra observatory. PoWR model atmospheres were calculated to provide realistic wind opacities and to establish the wind density structure. We find that collisional de-excitation is the dominant mechanism depopulating the metastable upper levels of the forbidden lines of the He-like ions Si XIV and Mg XII. Comparison between the model and observations reveals that X-ray emission is produced in a dense plasma, which could reside only at the photosphere or in a colliding wind zone between binary components. The observed X-ray spectra are well-fitted by thermal plasma models, with average temperatures in excess of 10 MK. The wind speed in Cyg OB2 12 is not high enough to power such high temperatures, but the collision of two winds in a binary system can be sufficient. We used archival data to investigate the X-ray properties of other blue hypergiants. In general, stars of this class are not detected as X-ray sources. We suggest that our new Chandra observations of Cyg OB2 12 can be best explained if Cyg OB2 12 is a colliding wind binary possessing a late O-type companion. This makes Cyg OB2 12 only the second binary system among the 16 known Galactic hypergiants. This low binary fraction indicates that the blue hypergiants are likely products of massive binary evolution during which they either accreted a significant amount of mass or already merged with their companions.}, language = {en} } @misc{ZwickelKahlKlaffkeetal.2017, author = {Zwickel, Theresa and Kahl, Sandra and Klaffke, Horst and Rychlik, Michael and M{\"u}ller, Marina E. H.}, title = {Spotlight on the underdogs}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-400438}, pages = {17}, year = {2017}, abstract = {Alternaria (A.) is a genus of widespread fungi capable of producing numerous, possibly health-endangering Alternaria toxins (ATs), which are usually not the focus of attention. The formation of ATs depends on the species and complex interactions of various environmental factors and is not fully understood. In this study the influence of temperature (7 °C, 25 °C), substrate (rice, wheat kernels) and incubation time (4, 7, and 14 days) on the production of thirteen ATs and three sulfoconjugated ATs by three different Alternaria isolates from the species groups A. tenuissima and A. infectoria was determined. High-performance liquid chromatography coupled with tandem mass spectrometry was used for quantification. Under nearly all conditions, tenuazonic acid was the most extensively produced toxin. At 25 °C and with increasing incubation time all toxins were formed in high amounts by the two A. tenuissima strains on both substrates with comparable mycotoxin profiles. However, for some of the toxins, stagnation or a decrease in production was observed from day 7 to 14. As opposed to the A. tenuissima strains, the A. infectoria strain only produced low amounts of ATs, but high concentrations of stemphyltoxin III. The results provide an essential insight into the quantitative in vitro AT formation under different environmental conditions, potentially transferable to different field and storage conditions}, language = {en} } @article{LindauerHoosLeytonBrownetal.2017, author = {Lindauer, Marius and Hoos, Holger and Leyton-Brown, Kevin and Schaub, Torsten}, title = {Automatic construction of parallel portfolios via algorithm configuration}, series = {Artificial intelligence}, volume = {244}, journal = {Artificial intelligence}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0004-3702}, doi = {10.1016/j.artint.2016.05.004}, pages = {272 -- 290}, year = {2017}, abstract = {Since 2004, increases in computational power described by Moore's law have substantially been realized in the form of additional cores rather than through faster clock speeds. To make effective use of modern hardware when solving hard computational problems, it is therefore necessary to employ parallel solution strategies. In this work, we demonstrate how effective parallel solvers for propositional satisfiability (SAT), one of the most widely studied NP-complete problems, can be produced automatically from any existing sequential, highly parametric SAT solver. Our Automatic Construction of Parallel Portfolios (ACPP) approach uses an automatic algorithm configuration procedure to identify a set of configurations that perform well when executed in parallel. Applied to two prominent SAT solvers, Lingeling and clasp, our ACPP procedure identified 8-core solvers that significantly outperformed their sequential counterparts on a diverse set of instances from the application and hard combinatorial category of the 2012 SAT Challenge. We further extended our ACPP approach to produce parallel portfolio solvers consisting of several different solvers by combining their configuration spaces. Applied to the component solvers of the 2012 SAT Challenge gold medal winning SAT Solver pfolioUZK, our ACPP procedures produced a significantly better-performing parallel SAT solver.}, language = {en} } @misc{MartinezNunezKretschmarBozzoetal.2017, author = {Martinez-Nunez, Silvia and Kretschmar, Peter and Bozzo, Enrico and Oskinova, Lidia M. and Puls, Joachim and Sidoli, Lara and Sundqvist, Jon Olof and Blay, Pere and Falanga, Maurizio and Furst, Felix and Gimenez-Garcia, Angel and Kreykenbohm, Ingo and Kuehnel, Matthias and Sander, Andreas Alexander Christoph and Torrejon, Jose Miguel and Wilms, Joern}, title = {Towards a Unified View of Inhomogeneous Stellar Winds in Isolated Supergiant Stars and Supergiant High Mass X-Ray Binaries}, series = {Space science reviews}, volume = {212}, journal = {Space science reviews}, publisher = {Springer}, address = {Dordrecht}, issn = {0038-6308}, doi = {10.1007/s11214-017-0340-1}, pages = {59 -- 150}, year = {2017}, abstract = {Massive stars, at least similar to 10 times more massive than the Sun, have two key properties that make them the main drivers of evolution of star clusters, galaxies, and the Universe as a whole. On the one hand, the outer layers of massive stars are so hot that they produce most of the ionizing ultraviolet radiation of galaxies; in fact, the first massive stars helped to re-ionize the Universe after its Dark Ages. Another important property of massive stars are the strong stellar winds and outflows they produce. This mass loss, and finally the explosion of a massive star as a supernova or a gamma-ray burst, provide a significant input of mechanical and radiative energy into the interstellar space. These two properties together make massive stars one of the most important cosmic engines: they trigger the star formation and enrich the interstellar medium with heavy elements, that ultimately leads to formation of Earth-like rocky planets and the development of complex life. The study of massive star winds is thus a truly multidisciplinary field and has a wide impact on different areas of astronomy. In recent years observational and theoretical evidences have been growing that these winds are not smooth and homogeneous as previously assumed, but rather populated by dense "clumps". The presence of these structures dramatically affects the mass loss rates derived from the study of stellar winds. Clump properties in isolated stars are nowadays inferred mostly through indirect methods (i.e., spectroscopic observations of line profiles in various wavelength regimes, and their analysis based on tailored, inhomogeneous wind models). The limited characterization of the clump physical properties (mass, size) obtained so far have led to large uncertainties in the mass loss rates from massive stars. Such uncertainties limit our understanding of the role of massive star winds in galactic and cosmic evolution. Supergiant high mass X-ray binaries (SgXBs) are among the brightest X-ray sources in the sky. A large number of them consist of a neutron star accreting from the wind of a massive companion and producing a powerful X-ray source. The characteristics of the stellar wind together with the complex interactions between the compact object and the donor star determine the observed X-ray output from all these systems. Consequently, the use of SgXBs for studies of massive stars is only possible when the physics of the stellar winds, the compact objects, and accretion mechanisms are combined together and confronted with observations. This detailed review summarises the current knowledge on the theory and observations of winds from massive stars, as well as on observations and accretion processes in wind-fed high mass X-ray binaries. The aim is to combine in the near future all available theoretical diagnostics and observational measurements to achieve a unified picture of massive star winds in isolated objects and in binary systems.}, language = {en} } @article{LetoTrigilioOskinovaetal.2017, author = {Leto, Paolo and Trigilio, C. and Oskinova, Lidia M. and Ignace, R. and Buemi, C. S. and Umana, G. and Ingallinera, A. and Todt, Helge Tobias and Leone, F.}, title = {The detection of variable radio emission from the fast rotating magnetic hot B-star HR 7355 and evidence for its X-ray aurorae}, series = {Monthly notices of the Royal Astronomical Society}, volume = {467}, journal = {Monthly notices of the Royal Astronomical Society}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {0035-8711}, doi = {10.1093/mnras/stx267}, pages = {2820 -- 2833}, year = {2017}, abstract = {In this paper, we investigate the multiwavelength properties of the magnetic early B-type star HR 7355. We present its radio light curves at several frequencies, taken with the Jansky Very Large Array, and X-ray spectra, taken with the XMM-Newton X-ray telescope. Modelling of the radio light curves for the Stokes I and V provides a quantitative analysis of the HR 7355 magnetosphere. A comparison between HR 7355 and a similar analysis for the Ap star CU Vir allows us to study how the different physical parameters of the two stars affect the structure of the respective magnetospheres where the non-thermal electrons originate. Our model includes a cold thermal plasma component that accumulates at high magnetic latitudes that influences the radio regime, but does not give rise to X-ray emission. Instead, the thermal X-ray emission arises from shocks generated by wind stream collisions close to the magnetic equatorial plane. The analysis of the X-ray spectrum of HR 7355 also suggests the presence of a non-thermal radiation. Comparison between the spectral index of the power-law X-ray energy distribution with the non-thermal electron energy distribution indicates that the non-thermal X-ray component could be the auroral signature of the non-thermal electrons that impact the stellar surface, the same non-thermal electrons that are responsible for the observed radio emission. On the basis of our analysis, we suggest a novel model that simultaneously explains the X-ray and the radio features of HR 7355 and is likely relevant for magnetospheres of other magnetic early-type stars.}, language = {en} } @article{PillitteriWolkRealeetal.2017, author = {Pillitteri, Ignazio and Wolk, Scott J. and Reale, Fabio and Oskinova, Lidia M.}, title = {The early B-type star Rho Ophiuchi A is an X-ray lighthouse}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {602}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201630070}, pages = {10}, year = {2017}, abstract = {We present the results of a 140 ks XMM-Newton observation of the B2 star rho Oph A. The star has exhibited strong X-ray variability: a cusp-shaped increase of rate, similar to that which we partially observed in 2013, and a bright flare. These events are separated in time by about 104 ks, which likely correspond to the rotational period of the star (1.2 days). Time resolved spectroscopy of the X-ray spectra shows that the first event is caused by an increase of the plasma emission measure, while the second increase of rate is a major flare with temperatures in excess of 60 MK (kT similar to 5 keV). From the analysis of its rise, we infer a magnetic field of >= 300 G and a size of the flaring region of similar to 1.4-1.9 x 10(11) cm, which corresponds to similar to 25\%-30\% of the stellar radius. We speculate that either an intrinsic magnetism that produces a hot spot on its surface or an unknown low mass companion are the source of such X-rays and variability. A hot spot of magnetic origin should be a stable structure over a time span of >= 2.5 yr, and suggests an overall large scale dipolar magnetic field that produces an extended feature on the stellar surface. In the second scenario, a low mass unknown companion is the emitter of X-rays and it should orbit extremely close to the surface of the primary in a locked spin-orbit configuration, almost on the verge of collapsing onto the primary. As such, the X-ray activity of the secondary star would be enhanced by its young age, and the tight orbit as in RS Cvn systems. In both cases rho Oph would constitute an extreme system that is worthy of further investigation.}, language = {en} } @article{IgnaceHoleOskinovaetal.2017, author = {Ignace, R. and Hole, K. T. and Oskinova, Lidia M. and Rotter, J. P.}, title = {An X-Ray Study of Two B plus B Binaries: AH Cep and CW Cep}, series = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, volume = {850}, journal = {The astrophysical journal : an international review of spectroscopy and astronomical physics}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {0004-637X}, doi = {10.3847/1538-4357/aa93ea}, pages = {7}, year = {2017}, abstract = {AH Cep and CW Cep are both early B-type binaries with short orbital periods of 1.8. days and 2.7. days, respectively. All four components are B0.5V types. The binaries are also double-lined spectroscopic and eclipsing. Consequently, solutions for orbital and stellar parameters make the pair of binaries ideal targets for a study of the colliding winds between two B. stars. Chandra ACIS-I observations were obtained to determine X-ray luminosities. AH. Cep was detected with an unabsorbed X-ray luminosity at a 90\% confidence interval of (9-33) x 10(30) erg s(-1), or (0.5-1.7) x 10(-7) L-Bol , relative to the combined Bolometric luminosities of the two components. While formally consistent with expectations for embedded wind shocks, or binary wind collision, the near-twin system of CW Cep was a surprising nondetection. For CW Cep, an upper limit was determined with L-X/L-Bol < 10(-8), again for the combined components. One difference between these two systems is that AH Cep is part of a multiple system. The X-rays from AH. Cep may not arise from standard wind shocks nor wind collision, but perhaps instead from magnetism in any one of the four components of the system. The possibility could be tested by searching for cyclic X-ray variability in AH. Cep on the short orbital period of the inner B. stars.}, language = {en} } @article{ToalaOskinovaIgnace2017, author = {Toala, Jes{\´u}s Alberto and Oskinova, Lidia M. and Ignace, R.}, title = {On the Absence of Non-thermal X-Ray Emission around Runaway O Stars}, series = {The astrophysical journal : an international review of spectroscopy and astronomical physics ; Part 2, Letters}, volume = {838}, journal = {The astrophysical journal : an international review of spectroscopy and astronomical physics ; Part 2, Letters}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {2041-8205}, doi = {10.3847/2041-8213/aa667c}, pages = {1 -- 32}, year = {2017}, abstract = {Theoretical models predict that the compressed interstellar medium around runaway O stars can produce highenergy non-thermal diffuse emission, in particular, non-thermal X-ray and gamma-ray emission. So far, detection of nonthermal X-ray emission was claimed for only one runaway star, AE Aur. We present a search for non-thermal diffuse X-ray emission from bow shocks using archived XMM-Newton observations for a clean sample of six welldetermined runaway O stars. We find that none of these objects present diffuse X-ray emission associated with their bow shocks, similarly to previous X-ray studies toward. zeta ph and BD+ 43 degrees 3654. We carefully investigated multi-wavelength observations of AE Aur and could not confirm previous findings of non-thermal X-rays. We conclude that so far there is no clear evidence of non-thermal extended emission in bow shocks around runaway O stars.}, language = {en} } @article{BozzoBernardiniFerrignoetal.2017, author = {Bozzo, Enrico and Bernardini, F. and Ferrigno, Carlo and Falanga, M. and Romano, Patrizia and Oskinova, Lidia M.}, title = {The accretion environment of supergiant fast X-ray transients probed with XMM-Newton}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {608}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201730398}, pages = {20}, year = {2017}, abstract = {Context. Supergiant fast X-ray (SFXT) transients are a peculiar class of supergiant X-ray binaries characterized by a remarkable variability in the X-ray domain, widely ascribed to accretion from a clumpy stellar wind. Aims. In this paper we performed a systematic and homogeneous analysis of the sufficiently bright X-ray flares observed with XMM-Newton from the supergiant fast X-ray transients to probe spectral variations on timescales as short as a few hundred seconds. Our ultimate goal is to investigate whether SFXT flares and outbursts are triggered by the presence of clumps, and to reveal whether strongly or mildly dense clumps are required. Methods. For all sources, we employ a technique developed by our group already exploited in a number of our previous papers, making use of an adaptive rebinned hardness ratio to optimally select the time intervals for the spectral extraction. A total of twelve observations performed in the direction of five SFXTs are reported, providing the largest sample of events available so far. Results. Using the original results reported here and those obtained with our technique from the analysis of two previously published XMM-Newton observations of IGR J17544-2619 and IGR J18410-0535, we show that both strongly and mildly dense clumps can trigger these events. In the former case, the local absorption column density may increase by a factor of >> 3, while in the latter case, the increase is only a factor of similar to 2-3 (or lower). An increase in the absorption column density is generally recorded during the rise of the flares/outbursts, while a drop follows when the source achieves peak flux. In a few cases, a re-increase of the absorption column density after the flare is also detected, and we discovered one absorption event related to the passage of an unaccreted clump in front of the compact object. Overall, there seems to be no obvious correlation between the dynamic ranges in the X-ray fluxes and absorption column densities in supergiant fast X-ray transients, with an indication that lower densities are recorded at the highest fluxes. Conclusions. The spectral variations measured in all sources are in agreement with the idea that the flares/outbursts are triggered by the presence of dense structures in the wind interacting with the X-rays from the compact object (leading to photoionization). The lack of correlation between the dynamic ranges in the X-ray fluxes and absorption column densities can be explained by the presence of accretion inhibition mechanism(s). Based on the knowledge acquired so far on the SFXTs, we propose a classification of the flares/outbursts from these sources in order to drive future observational investigations. We suggest that the difference between the classes of flares/outbursts is related to the fact that the mechanism(s) inhibiting accretion can be overcome more easily in some sources compared to others. We also investigate the possibility that different stellar wind structures, other than clumps, could provide the means to temporarily overcome the inhibition of accretion in supergiant fast X-ray transients.}, language = {en} } @article{BozzoOskinovaLobeletal.2017, author = {Bozzo, Enrico and Oskinova, Lidia M. and Lobel, A. and Hamann, Wolf-Rainer}, title = {The super-orbital modulation of supergiant high-mass X-ray binaries}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {606}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, organization = {LIGO Sci Collaboration \& Virgo;Fermi GBM;INTERGRAL;IceCube Collaboration;AstroSat Cadmium Zinc Telluride;IPN Collaboration;Insight-Hxmt Collaboration;ANTARES Collaboration;Swift Collaboration;AGILE Team;The 1M2H Team;Dark Energy Camera GW-EM;DLT40 Collaboration;GRAWITA GRAvitational Wave;Fermi Large Area Telescope;ATCA Australia Telescope;ASKAP Australian SKA Pathfinder;Las Cumbres Observatory Grp;OzGrav DWF Deeper Wider Faster;VINROUGE Collaboration;MASTER Collaboration;J-GEM;GROWTH JAGWAR CALTECH;Pan-STARRS;MAXI Team;TZAC Consortium;KU Collaboration;Nordic Optical Telescope;ePESSTO;GROUND;Texas Tech Univ;Salt Grp;Toros Transient Robotic Observat;BOOTES Collaboration;MWA Murchison Widefield Array;CALET Collaboration;IKI-GW Follow-up Collaboration;H E S S Collaboration;LOFAR Collaboration;LWA Long Wavelength Array;HAWC Collaboration;Pierre Auger Collaboration;ALMA Collaboration;Euro VLBI Team;Pi Sky Collaboration;Chandra Team McGill Univ;DFN Desert Fireball Network;ATLAS;High Time Resolution Universe;RIMAS RATIR;SKA South Africa MeerKAT}, issn = {1432-0746}, doi = {10.1051/0004-6361/201731930}, pages = {4}, year = {2017}, abstract = {The long-term X-ray light curves of classical supergiant X-ray binaries and supergiant fast X-ray transients show relatively similar super-orbital modulations, which are still lacking a sound interpretation. We propose that these modulations are related to the presence of corotating interaction regions (CIRs) known to thread the winds of OB supergiants. To test this hypothesis, we couple the outcomes of three-dimensional (3D) hydrodynamic models for the formation of CIRs in stellar winds with a simplified recipe for the accretion onto a neutron star. The results show that the synthetic X-ray light curves are indeed modulated by the presence of the CIRs. The exact period and amplitude of these modulations depend on a number of parameters governing the hydrodynamic wind models and on the binary orbital configuration. To compare our model predictions with the observations, we apply the 3D wind structure previously shown to well explain the appearance of discrete absorption components in the UV time series of a prototypical B0.5I-type supergiant. Using the orbital parameters of IGRJ 16493-4348, which has the same B0.5I donor spectral type, the period and modulations in the simulated X-ray light curve are similar to the observed ones, thus providing support to our scenario. We propose that the presence of CIRs in donor star winds should be considered in future theoretical and simulation efforts of wind-fed X-ray binaries.}, language = {en} } @article{PillitteriFossatiRodriguezetal.2017, author = {Pillitteri, Ignazio and Fossati, Luca and Rodriguez, N. Castro and Oskinova, Lidia M. and Wolk, Scott J.}, title = {Detection of magnetic field in the B2 star rho Ophiuchi A with ESO FORS2}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {610}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201732078}, pages = {4}, year = {2017}, abstract = {Circumstantial evidence suggests that magnetism and enhanced X-ray emission are likely correlated in early B-type stars: similar fractions of them (similar to 10\%) are strong and hard X-ray sources and possess strong magnetic fields. It is also known that some B-type stars have spots on their surface. Yet up to now no X-ray activity associated with spots on early-type stars was detected. In this Letter we report the detection of a magnetic field on the B2V star rho Oph A. Previously, we assessed that the X-ray activity of this star is associated with a surface spot, herewith we establish its magnetic origin. We analyze spectra of rho Oph A obtained with the FORS2 spectrograph at ESO Very Large Telescope (VLT) at two epochs, and detect a longitudinal component of the magnetic field of the order of similar to 500 G in one of the datasets. The detection of the magnetic field only at one epoch can be explained by stellar rotation which is also invoked to explain observed periodic X-ray activity. From archival HARPS ESO VLT high resolution spectra we derived the fundamental stellar parameters of rho Oph A and further constrained its age. We conclude that rho Oph A provides strong evidence for the presence of active X-ray emitting regions on young magnetized early type stars.}, language = {en} } @article{SchoellerHubrigFossatietal.2017, author = {Sch{\"o}ller, Markus and Hubrig, Swetlana and Fossati, L. and Carroll, Thorsten Anthony and Briquet, Maryline and Oskinova, Lidia M. and J{\"a}rvinen, S. and Ilyin, Ilya and Castro, N. and Morel, T. and Langer, N. and Przybilla, N. and Nieva, M. -F. and Kholtygin, A. F. and Sana, H. and Herrero, A. and Barba, R. H. and de Koter, A.}, title = {B fields in OB stars (BOB)}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {599}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, organization = {BOB Collaboration}, issn = {1432-0746}, doi = {10.1051/0004-6361/201628905}, pages = {11}, year = {2017}, abstract = {Aims. The B fields in OB stars (BOB) Collaboration is based on an ESO Large Programme to study the occurrence rate, properties, and ultimately the origin of magnetic fields in massive stars. Methods. In the framework of this program, we carried out low-resolution spectropolarimetric observations of a large sample of massive stars using FORS2 installed at the ESO VLT 8m telescope. Results. We determined the magnetic field values with two completely independent reduction and analysis pipelines. Our in-depth study of the magnetic field measurements shows that differences between our two pipelines are usually well within 3 sigma errors. From the 32 observations of 28 OB stars, we were able to monitor the magnetic fields in CPD -57 degrees 3509 and HD164492C, confirm the magnetic field in HD54879, and detect a magnetic field in CPD -62 degrees 2124. We obtain a magnetic field detection rate of 6 +/- 3\% for the full sample of 69 OB stars observed with FORS 2 within the BOB program. For the preselected objects with a nu sin i below 60 km s(-1), we obtain a magnetic field detection rate of 5 +/- 5\%. We also discuss X-ray properties and multiplicity of the objects in our FORS2 sample with respect to the magnetic field detections.}, language = {en} } @article{SanjurjoFerrrinTorrejonPostnovetal.2017, author = {Sanjurjo-Ferrrin, G. and Torrejon, J. M. and Postnov, K. and Oskinova, Lidia M. and Rodes-Roca, J. J. and Bernabeu, Guillermo}, title = {XMM-Newton spectroscopy of the accreting magnetar candidate 4U0114+65}, series = {Astronomy and astrophysics : an international weekly journal}, volume = {606}, journal = {Astronomy and astrophysics : an international weekly journal}, publisher = {EDP Sciences}, address = {Les Ulis}, issn = {1432-0746}, doi = {10.1051/0004-6361/201630119}, pages = {4039 -- 4042}, year = {2017}, abstract = {Methods. We analysed the energy-resolved light curve and the time-resolved X-ray spectra provided by the EPIC cameras on board XMM-Newton. We also analysed the first high-resolution spectrum of this source provided by the Reflection Grating Spectrometer. Results. An X-ray pulse of 9350 +/- 160 s was measured. Comparison with previous measurements confirms the secular spin up of this source. We successfully fit the pulse-phase-resolved spectra with Comptonisation models. These models imply a very small (r similar to 3 km) and hot (kT similar to 2-3 keV) emitting region and therefore point to a hot spot over the neutron star (NS) surface as the most reliable explanation for the X-ray pulse. The long NS spin period, the spin-up rate, and persistent X-ray emission can be explained within the theory of quasi-spherical settling accretion, which may indicate that the magnetic field is in the magnetar range. Thus, 4U0114+65 could be a wind-accreting magnetar. We also observed two episodes of low luminosity. The first was only observed in the low-energy light curve and can be explained as an absorption by a large over-dense structure in the wind of the B1 supergiant donor. The second episode, which was deeper and affected all energies, may be due to temporal cessation of accretion onto one magnetic pole caused by non-spherical matter capture from the structured stellar wind. The light curve displays two types of dips that are clearly seen during the high-flux intervals. The short dips, with durations of tens of seconds, are produced through absorption by wind clumps. The long dips, in turn, seem to be associated with the rarefied interclump medium. From the analysis of the X-ray spectra, we found evidence of emission lines in the X-ray photoionised wind of the B1Ia donor. The Fe K alpha line was found to be highly variable and much weaker than in other X-ray binaries with supergiant donors. The degree of wind clumping, measured through the covering fraction, was found to be much lower than in supergiant donor stars with earlier spectral types. Conclusions. The XMM-Newton spectroscopy provided further support for the magnetar nature of the neutron star in 4U0114+65. The light curve presents dips that can be associated with clumps and the interclump medium in the stellar wind of the mass donor.}, language = {en} } @misc{KubatovaKubatHamannetal.2017, author = {Kubatova, B. and Kub{\´a}t, Jiř{\´i} and Hamann, Wolf-Rainer and Oskinova, Lidia M.}, title = {Clumping in Massive Star Winds and its Possible Connection to the B[e] Phenomenon}, series = {The B(e) Phenomenon: Forty Years of Studies : proceedings of a conference held at Charles University, Prague, Czech Republic, 27 June-1 July 2016}, volume = {508}, journal = {The B(e) Phenomenon: Forty Years of Studies : proceedings of a conference held at Charles University, Prague, Czech Republic, 27 June-1 July 2016}, publisher = {Astronomical Soceity of the Pacific}, address = {San Fransisco}, isbn = {978-1-58381-900-5}, pages = {45 -- 50}, year = {2017}, abstract = {It has been observationally established that winds of hot massive stars have highly variable characteristics. The variability evident in the winds is believed to be caused by structures on a broad range of spatial scales. Small-scale structures (clumping) in stellar winds of hot stars are possible consequence of an instability appearing in their radiation hydrodynamics. To understand how clumping may influence calculation of theoretical spectra, different clumping properties and their 3D nature have to be taken into account. Properties of clumping have been examined using our 3D radiative transfer calculations. Effects of clumping for the case of the B[e] phenomenon are discussed.}, language = {en} } @article{ShahnejatBushehriAlluMehterovetal.2017, author = {Shahnejat-Bushehri, Sara and Allu, Annapurna Devi and Mehterov, Nikolay and Thirumalaikumar, Venkatesh P. and Alseekh, Saleh and Fernie, Alisdair and Mueller-Roeber, Bernd and Balazadeh, Salma}, title = {Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato}, series = {Frontiers in plant science}, volume = {8}, journal = {Frontiers in plant science}, publisher = {Frontiers Research Foundation}, address = {Lausanne}, issn = {1664-462X}, doi = {10.3389/fpls.2017.00214}, pages = {13}, year = {2017}, abstract = {The Arabidopsis thaliana NAC transcription factor JUNGBRUNNEN1 (AtJUB1) regulates growth by directly repressing GA3ox1 and DWF4, two key genes involved in gibberellin (GA) and brassinosteroid (BR) biosynthesis, respectively, leading to GA and BR deficiency phenotypes. AtJUB1 also reduces the expression of PIF4, a bHLH transcription factor that positively controls cell elongation, while it stimulates the expression of DELLA genes, which are important repressors of growth. Here, we extend our previous findings by demonstrating that AtJUB1 induces similar GA and BR deficiency phenotypes and changes in gene expression when overexpressed in tomato (Solanum lycopersicum). Importantly, and in accordance with the growth phenotypes observed, AtJUB1 inhibits the expression of growth-supporting genes, namely the tomato orthologs of GA3ox1, DWF4 and PIF4, but activates the expression of DELLA orthologs, by directly binding to their promoters. Overexpression of AtJUB1 in tomato delays fruit ripening, which is accompanied by reduced expression of several ripeningrelated genes, and leads to an increase in the levels of various amino acids (mostly proline, beta-alanine, and phenylalanine), gamma-aminobutyric acid (GABA), and major organic acids including glutamic acid and aspartic acid. The fact that AtJUB1 exerts an inhibitory effect on the GA/BR biosynthesis and PIF4 genes but acts as a direct activator of DELLA genes in both, Arabidopsis and tomato, strongly supports the model that the molecular constituents of the JUNGBRUNNEN1 growth control module are considerably conserved across species.}, language = {en} } @article{NietzscheGuerraAlseekhetal.2017, author = {Nietzsche, Madlen and Guerra, Tiziana and Alseekh, Saleh and Wiermer, Marcel and Sonnewald, Sophia and Fernie, Alisdair and B{\"o}rnke, Frederik}, title = {STOREKEEPER RELATED1/G-Element Binding Protein (STKR1) Interacts with Protein Kinase SnRK1}, series = {Plant physiology : an international journal devoted to physiology, biochemistry, cellular and molecular biology, biophysics and environmental biology of plants}, volume = {176}, journal = {Plant physiology : an international journal devoted to physiology, biochemistry, cellular and molecular biology, biophysics and environmental biology of plants}, number = {2}, publisher = {American Society of Plant Physiologists}, address = {Rockville}, issn = {0032-0889}, doi = {10.1104/pp.17.01461}, pages = {1773 -- 1792}, year = {2017}, abstract = {Sucrose nonfermenting related kinase1 (SnRK1) is a conserved energy sensor kinase that regulates cellular adaptation to energy deficit in plants. Activation of SnRK1 leads to the down-regulation of ATP-consuming biosynthetic processes and the stimulation of energy-generating catabolic reactions by transcriptional reprogramming and posttranslational modifications. Although considerable progress has been made during the last years in understanding the SnRK1 signaling pathway, many of its components remain unidentified. Here, we show that the catalytic alpha-subunits KIN10 and KIN11 of the Arabidopsis (Arabidopsis thaliana) SnRK1 complex interact with the STOREKEEPER RELATED1/G-Element Binding Protein (STKR1) inside the plant cell nucleus. Overexpression of STKR1 in transgenic Arabidopsis plants led to reduced growth, a delay in flowering, and strongly attenuated senescence. Metabolite profiling revealed that the transgenic lines exhausted their carbohydrates during the dark period to a greater extent than the wild type and accumulated a range of amino acids. At the global transcriptome level, genes affected by STKR1 overexpression were broadly associated with systemic acquired resistance, and transgenic plants showed enhanced resistance toward a virulent strain of the biotrophic oomycete pathogen Hyaloperonospora arabidopsidis Noco2. We discuss a possible connection of STKR1 function, SnRK1 signaling, and plant immunity.}, language = {en} } @article{RobainaEstevezDalosoZhangetal.2017, author = {Robaina-Estevez, Semidan and Daloso, Danilo M. and Zhang, Youjun and Fernie, Alisdair and Nikoloski, Zoran}, title = {Resolving the central metabolism of Arabidopsis guard cells}, series = {Scientific reports}, volume = {7}, journal = {Scientific reports}, publisher = {Nature Publ. Group}, address = {London}, issn = {2045-2322}, doi = {10.1038/s41598-017-07132-9}, pages = {1913 -- 1932}, year = {2017}, abstract = {Photosynthesis and water use efficiency, key factors affecting plant growth, are directly controlled by microscopic and adjustable pores in the leaf-the stomata. The size of the pores is modulated by the guard cells, which rely on molecular mechanisms to sense and respond to environmental changes. It has been shown that the physiology of mesophyll and guard cells differs substantially. However, the implications of these differences to metabolism at a genome-scale level remain unclear. Here, we used constraint-based modeling to predict the differences in metabolic fluxes between the mesophyll and guard cells of Arabidopsis thaliana by exploring the space of fluxes that are most concordant to cell-type-specific transcript profiles. An independent C-13-labeling experiment using isolated mesophyll and guard cells was conducted and provided support for our predictions about the role of the Calvin-Benson cycle in sucrose synthesis in guard cells. The combination of in silico with in vivo analyses indicated that guard cells have higher anaplerotic CO2 fixation via phosphoenolpyruvate carboxylase, which was demonstrated to be an important source of malate. Beyond highlighting the metabolic differences between mesophyll and guard cells, our findings can be used in future integrated modeling of multicellular plant systems and their engineering towards improved growth.}, language = {en} } @article{MalinovaAlseekhFeiletal.2017, author = {Malinova, Irina and Alseekh, Saleh and Feil, Regina and Fernie, Alisdair and Baumann, Otto and Schoettler, Mark Aurel and Lunn, John Edward and Fettke, J{\"o}rg}, title = {Starch Synthase 4 and Plastidal Phosphorylase Differentially Affect Starch Granule Number and Morphology}, series = {Plant physiology : an international journal devoted to physiology, biochemistry, cellular and molecular biology, biophysics and environmental biology of plants}, volume = {174}, journal = {Plant physiology : an international journal devoted to physiology, biochemistry, cellular and molecular biology, biophysics and environmental biology of plants}, publisher = {American Society of Plant Physiologists}, address = {Rockville}, issn = {0032-0889}, doi = {10.1104/pp.16.01859}, pages = {73 -- 85}, year = {2017}, abstract = {The process of starch granule formation in leaves of Arabidopsis ( Arabidopsis thaliana) is obscure. Besides STARCH SYNTHASE4 (SS4), the PLASTIDIAL PHOSPHORYLASE (PHS1) also seems to be involved, since dpe2-1/phs1a double mutants lacking both PHS1 and the cytosolic DISPROPORTIONATING ENZYME2 (DPE2) displayed only one starch granule per chloroplast under normal growth conditions. For further studies, a dpe2-1/phs1a/ss4 triple mutant and various combinations of double mutants were generated and metabolically analyzed with a focus on starch metabolism. The dpe2-1/phs1a/ ss4 mutant revealed a massive starch excess phenotype. Furthermore, these plants grown under 12 h of light/12 h of dark harbored a single large and spherical starch granule per plastid. The number of starch granules was constant when the light/dark regime was altered, but this was not observed in the parental lines. With regard to growth, photosynthetic parameters, and metabolic analyses, the triple mutant additionally displayed alterations in comparison with ss4 and dpe21/phs1a. The results clearly illustrate that PHS1 and SS4 are differently involved in starch granule formation and do not act in series. However, SS4 appears to exert a stronger influence. In connection with the characterized double mutants, we discuss the generation of starch granules and the observed formation of spherical starch granules.}, language = {en} } @article{SmirnovaFernieSpahnetal.2017, author = {Smirnova, Julia and Fernie, Alisdair and Spahn, Christian M. T. and Steup, Martin}, title = {Photometric assay of maltose and maltose-forming enzyme activity by using 4-alpha-glucanotransferase (DPE2) from higher plants}, series = {Analytical biochemistry : methods in the biological sciences}, volume = {532}, journal = {Analytical biochemistry : methods in the biological sciences}, publisher = {Elsevier}, address = {San Diego}, issn = {0003-2697}, doi = {10.1016/j.ab.2017.05.026}, pages = {72 -- 82}, year = {2017}, abstract = {Maltose frequently occurs as intermediate of the central carbon metabolism of prokaryotic and eukaryotic cells. Various mutants possess elevated maltose levels. Maltose exists as two anomers, (alpha- and beta-form) which are rapidly interconverted without requiring enzyme-mediated catalysis. As maltose is often abundant together with other oligoglucans, selective quantification is essential. In this communication, we present a photometric maltose assay using 4-alpha-glucanotransferase (AtDPE2) from Arabidopsis thaliana. Under in vitro conditions, AtDPE2 utilizes maltose as glucosyl donor and glycogen as acceptor releasing the other hexosyl unit as free glucose which is photometrically quantified following enzymatic phosphorylation and oxidation. Under the conditions used, DPE2 does not noticeably react with other di- or oligosaccharides. Selectivity compares favorably with that of maltase frequently used in maltose assays. Reducing end interconversion of the two maltose anomers is in rapid equilibrium and, therefore, the novel assay measures total maltose contents. Furthermore, an AtDPE2-based continuous photometric assay is presented which allows to quantify beta-amylase activity and was found to be superior to a conventional test. Finally, the AtDPE2-based maltose assay was used to quantify leaf maltose contents of both Arabidopsis wild type and AtDPE2-deficient plants throughout the light-dark cycle. These data are presented together with assimilatory starch levels. (C) 2017 Published by Elsevier Inc.}, language = {en} } @phdthesis{deSouza2017, author = {de Souza, Leonardo Perez}, title = {Functional characterization of biosynthesis and regulation of plant secondary metabolism}, school = {Universit{\"a}t Potsdam}, pages = {102}, year = {2017}, language = {en} } @phdthesis{deSouza2017, author = {de Souza, Laise Rosado}, title = {Metabolic signalling between organelles}, school = {Universit{\"a}t Potsdam}, pages = {112}, year = {2017}, language = {en} } @article{JanhunenKaminskiOstrowskietal.2017, author = {Janhunen, Tomi and Kaminski, Roland and Ostrowski, Max and Schellhorn, Sebastian and Wanko, Philipp and Schaub, Torsten}, title = {Clingo goes linear constraints over reals and integers}, series = {Theory and practice of logic programming}, volume = {17}, journal = {Theory and practice of logic programming}, publisher = {Cambridge Univ. Press}, address = {New York}, issn = {1471-0684}, doi = {10.1017/S1471068417000242}, pages = {872 -- 888}, year = {2017}, abstract = {The recent series 5 of the Answer Set Programming (ASP) system clingo provides generic means to enhance basic ASP with theory reasoning capabilities. We instantiate this framework with different forms of linear constraints and elaborate upon its formal properties. Given this, we discuss the respective implementations, and present techniques for using these constraints in a reactive context. More precisely, we introduce extensions to clingo with difference and linear constraints over integers and reals, respectively, and realize them in complementary ways. Finally, we empirically evaluate the resulting clingo derivatives clingo[dl] and clingo[lp] on common language fragments and contrast them to related ASP systems.}, language = {en} } @misc{NeubauerWankoSchaubetal.2017, author = {Neubauer, Kai and Wanko, Philipp and Schaub, Torsten and Haubelt, Christian}, title = {Enhancing symbolic system synthesis through ASPmT with partial assignment evaluation}, series = {Proceedings of the Design, Automation \& Test in Europe Conference \& Exhibition (DATE), 2017}, journal = {Proceedings of the Design, Automation \& Test in Europe Conference \& Exhibition (DATE), 2017}, publisher = {IEEE}, address = {New York}, isbn = {978-3-9815370-9-3}, issn = {1530-1591}, doi = {10.23919/DATE.2017.7927005}, pages = {306 -- 309}, year = {2017}, abstract = {The design of embedded systems is becoming continuously more complex such that efficient system-level design methods are becoming crucial. Recently, combined Answer Set Programming (ASP) and Quantifier Free Integer Difference Logic (QF-IDL) solving has been shown to be a promising approach in system synthesis. However, this approach still has several restrictions limiting its applicability. In the paper at hand, we propose a novel ASP modulo Theories (ASPmT) system synthesis approach, which (i) supports more sophisticated system models, (ii) tightly integrates the QF-IDL solving into the ASP solving, and (iii) makes use of partial assignment checking. As a result, more realistic systems are considered and an early exclusion of infeasible solutions improves the entire system synthesis.}, language = {en} }