@phdthesis{Aue2024, author = {Aue, Lars}, title = {Cyclone impacts on sea ice in the Atlantic Arctic Ocean}, doi = {10.25932/publishup-63445}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-634458}, school = {Universit{\"a}t Potsdam}, pages = {VIII, 131}, year = {2024}, abstract = {The Arctic is the hot spot of the ongoing, global climate change. Over the last decades, near-surface temperatures in the Arctic have been rising almost four times faster than on global average. This amplified warming of the Arctic and the associated rapid changes of its environment are largely influenced by interactions between individual components of the Arctic climate system. On daily to weekly time scales, storms can have major impacts on the Arctic sea-ice cover and are thus an important part of these interactions within the Arctic climate. The sea-ice impacts of storms are related to high wind speeds, which enhance the drift and deformation of sea ice, as well as to changes in the surface energy budget in association with air mass advection, which impact the seasonal sea-ice growth and melt. The occurrence of storms in the Arctic is typically associated with the passage of transient cyclones. Even though the above described mechanisms how storms/cyclones impact the Arctic sea ice are in principal known, there is a lack of statistical quantification of these effects. In accordance with that, the overarching objective of this thesis is to statistically quantify cyclone impacts on sea-ice concentration (SIC) in the Atlantic Arctic Ocean over the last four decades. In order to further advance the understanding of the related mechanisms, an additional objective is to separate dynamic and thermodynamic cyclone impacts on sea ice and assess their relative importance. Finally, this thesis aims to quantify recent changes in cyclone impacts on SIC. These research objectives are tackled utilizing various data sets, including atmospheric and oceanic reanalysis data as well as a coupled model simulation and a cyclone tracking algorithm. Results from this thesis demonstrate that cyclones are significantly impacting SIC in the Atlantic Arctic Ocean from autumn to spring, while there are mostly no significant impacts in summer. The strength and the sign (SIC decreasing or SIC increasing) of the cyclone impacts strongly depends on the considered daily time scale and the region of the Atlantic Arctic Ocean. Specifically, an initial decrease in SIC (day -3 to day 0 relative to the cyclone) is found in the Greenland, Barents and Kara Seas, while SIC increases following cyclones (day 0 to day 5 relative to the cyclone) are mostly limited to the Barents and Kara Seas. For the cold season, this results in a pronounced regional difference between overall (day -3 to day 5 relative to the cyclone) SIC-decreasing cyclone impacts in the Greenland Sea and overall SIC-increasing cyclone impacts in the Barents and Kara Seas. A cyclone case study based on a coupled model simulation indicates that both dynamic and thermodynamic mechanisms contribute to cyclone impacts on sea ice in winter. A typical pattern consisting of an initial dominance of dynamic sea-ice changes followed by enhanced thermodynamic ice growth after the cyclone passage was found. This enhanced ice growth after the cyclone passage most likely also explains the (statistical) overall SIC-increasing effects of cyclones in the Barents and Kara Seas in the cold season. Significant changes in cyclone impacts on SIC over the last four decades have emerged throughout the year. These recent changes are strongly varying from region to region and month to month. The strongest trends in cyclone impacts on SIC are found in autumn in the Barents and Kara Seas. Here, the magnitude of destructive cyclone impacts on SIC has approximately doubled over the last four decades. The SIC-increasing effects following the cyclone passage have particularly weakened in the Barents Sea in autumn. As a consequence, previously existing overall SIC-increasing cyclone impacts in this region in autumn have recently disappeared. Generally, results from this thesis show that changes in the state of the sea-ice cover (decrease in mean sea-ice concentration and thickness) and near-surface air temperature are most important for changed cyclone impacts on SIC, while changes in cyclone properties (i.e. intensity) do not play a significant role.}, language = {en} } @misc{Heyde2021, author = {Heyde, J{\"u}rgen}, title = {Daniel B. Schwartz, Ghetto: The History of a Word (Cambridge, MA: Harvard University Press, 2019), 288 p.}, series = {PaRDeS : Journal of the Association for Jewish Studies in Germany}, journal = {PaRDeS : Journal of the Association for Jewish Studies in Germany}, number = {27}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-520-0}, issn = {1614-6492}, doi = {10.25932/publishup-53753}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-537530}, pages = {151 -- 154}, year = {2021}, language = {en} } @inproceedings{RehakStreckerEchtler2006, author = {Rehak, Katrin and Strecker, Manfred and Echtler, Helmut Peter}, title = {DEM supported tectonic geomorphology : the Coastal Cordillera of the South-Central Chilean active margin ; [Poster]}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-7224}, year = {2006}, abstract = {Fluvial systems are one of the major features shaping a landscape. They adjust to the prevailing tectonic and climatic setting and therefore are very sensitive markers of changes in these systems. If their response to tectonic and climatic forcing is quantified and if the climatic signal is excluded, it is possible to derive a local deformation history. Here, we investigate fluvial terraces and erosional surfaces in the southern Chilean forearc to assess a long-term geomorphic and hence tectonic evolution. Remote sensing and field studies of the Nahuelbuta Range show that the long-term deformation of the Chilean forearc is manifested by breaks in topography, sequences of differentially uplifted marine, alluvial and strath terraces as well as tectonically modified river courses and drainage basins. We used SRTM-90-data as basic elevation information for extracting and delineating drainage networks. We calculated hypsometric curves as an indicator for basin uplift, stream-length gradient indices to identify stream segments with anomalous slopes, and longitudinal river profiles as well as DS-plots to identify knickpoints and other anomalies. In addition, we investigated topography with elevation-slope graphs, profiles, and DEMs to reveal erosional surfaces. During the first field trip we already measured palaeoflow directions, performed pebble counting and sampled the fluvial terraces in order to apply cosmogenic nuclide dating (10Be, 26Al) as well as provenance analyses. Our preliminary analysis of the Coastal Cordillera indicates a clear segmentation between the northern and southern parts of the Nahuelbuta Range. The Lanalhue Fault, a NW-SE striking fault zone oblique to the plate boundary, defines the segment boundary. Furthermore, we find a complex drainage re-organisation including a drainage reversal and wind gap on the divide between the Tir{\´u}a and Pellahu{\´e}n basins east of the town Tir{\´u}a. The coastal basins lost most of their Andean sediment supply areas that existed in Tertiary and in part during early Pleistocene time. Between the B{\´i}o-B{\´i}o and Imperial rivers no Andean river is recently capable to traverse the Coastal Cordillera, suggesting ongoing Quaternary uplift of the entire range. From the spatial distribution of geomorphic surfaces in this region two uplift signals may be derived: (1) a long-term differential uplift process, active since the Miocene and possibly caused by underplating of subducted trench sediments, (2) a younger, local uplift affecting only the northern part of the Nahuelbuta Range that may be caused by the interaction of the forearc with the subduction of the Mocha Fracture Zone at the latitude of the Arauco peninsula. Our approach thus provides results in our attempt to decipher the characteristics of forearc development of active convergent margins using long-term geomorphic indicators. Furthermore, it is expected that our ongoing assessment will constrain repeatedly active zones of deformation.
Interdisziplin{\"a}res Zentrum f{\"u}r Musterdynamik und Angewandte Fernerkundung Workshop vom 9. - 10. Februar 2006}, language = {en} } @misc{RancanVolkmannGiulbudagianetal.2019, author = {Rancan, Fiorenza and Volkmann, Hildburg and Giulbudagian, Michael and Schumacher, Fabian and Stanko, Jessica Isolde and Kleuser, Burkhard and Blume-Peytavi, Ulrike and Calder{\´o}n, Marcelo and Vogt, Annika}, title = {Dermal Delivery of the High-Molecular-Weight Drug Tacrolimus by Means of Polyglycerol-Based Nanogels}, series = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Zweitver{\"o}ffentlichungen der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {1339}, issn = {1866-8372}, doi = {10.25932/publishup-47327}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-473270}, pages = {14}, year = {2019}, abstract = {Polyglycerol-based thermoresponsive nanogels (tNGs) have been shown to have excellent skin hydration properties and to be valuable delivery systems for sustained release of drugs into skin. In this study, we compared the skin penetration of tacrolimus formulated in tNGs with a commercial 0.1\% tacrolimus ointment. The penetration of the drug was investigated in ex vivo abdominal and breast skin, while different methods for skin barrier disruption were investigated to improve skin permeability or simulate inflammatory conditions with compromised skin barrier. The amount of penetrated tacrolimus was measured in skin extracts by liquid chromatography tandem-mass spectrometry (LC-MS/MS), whereas the inflammatory markers IL-6 and IL-8 were detected by enzyme-linked immunosorbent assay (ELISA). Higher amounts of tacrolimus penetrated in breast as compared to abdominal skin or in barrier-disrupted as compared to intact skin, confirming that the stratum corneum is the main barrier for tacrolimus skin penetration. The anti-proliferative effect of the penetrated drug was measured in skin tissue/Jurkat cells co-cultures. Interestingly, tNGs exhibited similar anti-proliferative effects as the 0.1\% tacrolimus ointment. We conclude that polyglycerol-based nanogels represent an interesting alternative to paraffin-based formulations for the treatment of inflammatory skin conditions.}, language = {en} } @techreport{CaliendoTuebbicke2021, type = {Working Paper}, author = {Caliendo, Marco and T{\"u}bbicke, Stefan}, title = {Design and Effectiveness of Start-Up Subsidies}, series = {CEPA Discussion Papers}, journal = {CEPA Discussion Papers}, number = {30}, issn = {2628-653X}, doi = {10.25932/publishup-50005}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-500056}, pages = {20}, year = {2021}, abstract = {While a growing body of literature finds positive impacts of Start-Up Subsidies (SUS) on labor market outcomes of participants, little is known about how the design of these programs shapes their effectiveness and hence how to improve policy. As experimental variation in program design is unavailable, we exploit the 2011 reform of the current German SUS program for the unemployed which strengthened case-workers' discretionary power, increased entry requirements and reduced monetary support. We estimate the impact of the reform on the program's effectiveness using samples of participants and non-participants from before and after the reform. To control for time-constant unobserved heterogeneity as well as differential selection patterns based on observable characteristics over time, we combine Difference-in-Differences with inverse probability weighting using covariate balancing propensity scores. Holding participants' observed characteristics as well as macroeconomic conditions constant, the results suggest that the reform was successful in raising employment effects on average. As these findings may be contaminated by changes in selection patterns based on unobserved characteristics, we assess our results using simulation-based sensitivity analyses and find that our estimates are highly robust to changes in unobserved characteristics. Hence, the reform most likely had a positive impact on the effectiveness of the program, suggesting that increasing entry requirements and reducing support in-creased the program's impacts while reducing the cost per participant.}, language = {en} } @article{StudemundHalevy2023, author = {Studemund-Hal{\´e}vy, Michael}, title = {Desperados at Sea}, series = {PaRDeS : Zeitschrift der Vereinigung f{\"u}r J{\"u}dische Studien e.V.}, journal = {PaRDeS : Zeitschrift der Vereinigung f{\"u}r J{\"u}dische Studien e.V.}, number = {28}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-552-1}, issn = {1614-6492}, doi = {10.25932/publishup-58579}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-585796}, pages = {100 -- 115}, year = {2023}, abstract = {Pirates are fortune-seeking fighters at sea. Their exploits fire the imaginations of their victims and admirers, drawing a veil over individuals who rarely bear a real name and pursue their adventurous occupations as buccaneers, filibusters, freebooters, privateers, pirates, or corsairs. Piracy, corsairing, and contraband trade were epidemic among the Egyptians and the Phoenicians, the Greeks and the Vikings, the Spaniards and the Ottomans, the Muslims, and the Christians. And the Jews.}, language = {en} } @misc{AllefeldFrischSchlesewsky2005, author = {Allefeld, Carsten and Frisch, Stefan and Schlesewsky, Matthias}, title = {Detection of early cognitive processing by event-related phase synchronization analysis}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-20126}, year = {2005}, abstract = {In order to investigate the temporal characteristics of cognitive processing, we apply multivariate phase synchronization analysis to event-related potentials. The experimental design combines a semantic incongruity in a sentence context with a physical mismatch (color change). In the ERP average, these result in an N400 component and a P300-like positivity, respectively. The synchronization analysis shows an effect of global desynchronization in the theta band around 288ms after stimulus presentation for the semantic incongruity, while the physical mismatch elicits an increase of global synchronization in the alpha band around 204ms. Both of these effects clearly precede those in the ERP average. Moreover, the delay between synchronization effect and ERP component correlates with the complexity of the cognitive processes.}, language = {en} } @unpublished{ThiessenhusenEspositoKurthsetal.1995, author = {Thiessenhusen, Kai-Uwe and Esposito, Larry W. and Kurths, J{\"u}rgen and Spahn, Frank}, title = {Detection of hidden resonances in Saturn's B-ring}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-13618}, year = {1995}, abstract = {The Voyager 2 Photopolarimeter experiment has yielded the highest resolved data of Saturn's rings, exhibiting a wide variety of features. The B-ring region between 105000 km and 110000 km distance from Saturn has been investigated. It has a high matter density and contains no significance features visible by eye. Analysis with statistical methods has let us to the detection of two significant events. These features are correlated with the inner 3:2 resonances of the F-ring shepherd satellites Pandora and Prometheus, and may be evidence of large ring paricles caught in the corotation resonances.}, language = {en} } @phdthesis{Rust2007, author = {Rust, Henning}, title = {Detection of long-range dependence : applications in climatology and hydrology}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-13347}, school = {Universit{\"a}t Potsdam}, year = {2007}, abstract = {It is desirable to reduce the potential threats that result from the variability of nature, such as droughts or heat waves that lead to food shortage, or the other extreme, floods that lead to severe damage. To prevent such catastrophic events, it is necessary to understand, and to be capable of characterising, nature's variability. Typically one aims to describe the underlying dynamics of geophysical records with differential equations. There are, however, situations where this does not support the objectives, or is not feasible, e.g., when little is known about the system, or it is too complex for the model parameters to be identified. In such situations it is beneficial to regard certain influences as random, and describe them with stochastic processes. In this thesis I focus on such a description with linear stochastic processes of the FARIMA type and concentrate on the detection of long-range dependence. Long-range dependent processes show an algebraic (i.e. slow) decay of the autocorrelation function. Detection of the latter is important with respect to, e.g. trend tests and uncertainty analysis. Aiming to provide a reliable and powerful strategy for the detection of long-range dependence, I suggest a way of addressing the problem which is somewhat different from standard approaches. Commonly used methods are based either on investigating the asymptotic behaviour (e.g., log-periodogram regression), or on finding a suitable potentially long-range dependent model (e.g., FARIMA[p,d,q]) and test the fractional difference parameter d for compatibility with zero. Here, I suggest to rephrase the problem as a model selection task, i.e.comparing the most suitable long-range dependent and the most suitable short-range dependent model. Approaching the task this way requires a) a suitable class of long-range and short-range dependent models along with suitable means for parameter estimation and b) a reliable model selection strategy, capable of discriminating also non-nested models. With the flexible FARIMA model class together with the Whittle estimator the first requirement is fulfilled. Standard model selection strategies, e.g., the likelihood-ratio test, is for a comparison of non-nested models frequently not powerful enough. Thus, I suggest to extend this strategy with a simulation based model selection approach suitable for such a direct comparison. The approach follows the procedure of a statistical test, with the likelihood-ratio as the test statistic. Its distribution is obtained via simulations using the two models under consideration. For two simple models and different parameter values, I investigate the reliability of p-value and power estimates obtained from the simulated distributions. The result turned out to be dependent on the model parameters. However, in many cases the estimates allow an adequate model selection to be established. An important feature of this approach is that it immediately reveals the ability or inability to discriminate between the two models under consideration. Two applications, a trend detection problem in temperature records and an uncertainty analysis for flood return level estimation, accentuate the importance of having reliable methods at hand for the detection of long-range dependence. In the case of trend detection, falsely concluding long-range dependence implies an underestimation of a trend and possibly leads to a delay of measures needed to take in order to counteract the trend. Ignoring long-range dependence, although present, leads to an underestimation of confidence intervals and thus to an unjustified belief in safety, as it is the case for the return level uncertainty analysis. A reliable detection of long-range dependence is thus highly relevant in practical applications. Examples related to extreme value analysis are not limited to hydrological applications. The increased uncertainty of return level estimates is a potentially problem for all records from autocorrelated processes, an interesting examples in this respect is the assessment of the maximum strength of wind gusts, which is important for designing wind turbines. The detection of long-range dependence is also a relevant problem in the exploration of financial market volatility. With rephrasing the detection problem as a model selection task and suggesting refined methods for model comparison, this thesis contributes to the discussion on and development of methods for the detection of long-range dependence.}, language = {en} } @inproceedings{BoegelButtHautlietal.2008, author = {B{\"o}gel, Tina and Butt, Miriam and Hautli, Annette and Sulger, Sebastian}, title = {Developing a finite-state morphological analyzer for Urdu and Hindi}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-27155}, year = {2008}, abstract = {We introduce and discuss a number of issues that arise in the process of building a finite-state morphological analyzer for Urdu, in particular issues with potential ambiguity and non-concatenative morphology. Our approach allows for an underlyingly similar treatment of both Urdu and Hindi via a cascade of finite-state transducers that transliterates the very different scripts into a common ASCII transcription system. As this transliteration system is based on the XFST tools that the Urdu/Hindi common morphological analyzer is also implemented in, no compatibility problems arise.}, language = {en} } @misc{Koechert2007, type = {Master Thesis}, author = {K{\"o}chert, Karl}, title = {Development of a method to assess EAAT1 transcription levels in Alzheimer's disease}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-15965}, school = {Universit{\"a}t Potsdam}, year = {2007}, abstract = {Zur Zeit leiden ca. 24 Millionen Menschen auf der ganzen Welt unter Demenz, Alzheimer macht dabei 50-60\% aller Demenzf{\"a}lle aus. Da der Anteil der Bev{\"o}lkerung, der an Demenz leidet, proportional zum Alter zunimmt und der Anteil {\"a}lterer Menschen in der Gesellschaft von Jahr zu Jahr steigt, wird Alzheimer immer mehr zu einem ernstzunehmenden, gesellschaftlichen Problem. Zum Stand der heutigen Forschung ist es etabliert, dass die Aminos{\"a}ure Glutamat - quantitativ einer der wichtigsten Neurotransmitter im Zentralen Nervensystem (ZNS) - toxische Konzentrationen erreichen kann wenn sie - im Zuge der {\"U}bertragung von Aktionspotentialen - nach ihrer Freisetzung nicht aus dem Synaptischen Spalt entfernt wird. Viele Studien haben gezeigt, dass in der Alzheimerschen Krankheit die Glutamataufnahme beeintr{\"a}chtigt ist, was zu toxischen Konzentrationen von Glutamat und dem daraus folgenden Absterben von Neuronen f{\"u}hrt. Der exitatorische Aminos{\"a}uretransporter 1 (EAAT1) geh{\"o}rt zu der Familie der Na+-abh{\"a}ngigen Glutamattransporter und stellt nach EAAT2 den quantitativ wichtigsten Glutamattransporter im ZNS dar. In diesem Projekt wurde eine bis dahin f{\"u}r den Menschen nicht bekannte EAAT1 Spleißvariante, in der Exon 3 ausgeschnitten wird, nachgewiesen. Diese Variante wurde EAAT1Δ3 genannt und stellt damit mit EAAT1Δ9 die zweite f{\"u}r EAAT1 nachgewiesene Spleißvariante dar. Eine auf real-time RT-PCR basierende Methode wurde entwickelt, um die Transkripte von EAAT1 wildtyp (EAAT1 wt), EAAT1Δ3 und EAAT1Δ9 zu quantifizieren. Proben aus verschiedenen Hirnarealen wurden aus einem Set von Kontrollen und Alzheimerf{\"a}llen bei der Quantifizierung verwendet. Die gew{\"a}hlten Areale sind von der Alzheimerschen Krankheit unterschiedlich stark betroffen. Dies diente als interne Kontrolle f{\"u}r die durchgef{\"u}hrten Experimente und erm{\"o}glichte so die Differenzierung zwischen beobachteten Effekten: Nur Effekte die alleinig in von Alzheimer betroffenen Gehirnarealen auftreten, k{\"o}nnen als spezifisch f{\"u}r die Krankheit angesehen werden. Die Resultate diese Projektes zeigen, dass EAAT1Δ3 in sehr geringer Anzahl transkribiert wird, die nur 0.15\% der EAAT1 wt Transkription entspricht. Dahingegen entspricht das EAAT1 Δ9 Transkript im Durchschnitt 26.6\% des EAAT1 wt Transkripts. Es wurde nachgewiesen, dass die Transkriptionsrate aller EAAT1 Varianten in Alzheimerf{\"a}llen signifikant reduziert ist (P<0.0001). Dies unterst{\"u}tzt die Theorie, dass bei Alzheimerf{\"a}llen die EAAT1 Proteinexpression stark reduziert und der Glutamattransport, der normalerweise durch diesen Transporter gew{\"a}hrleistet wird, stark eingeschr{\"a}nkt ist. Dies wiederum resultiert in toxisch hohen Glutamatkonzentrationen und damit dem Absterben von Neuronen. Die gefundene Reduktion der EAAT1Transkription ist nicht spezifisch f{\"u}r Gehirnareale die von Alzheimer betroffen sind, sondern tritt in selbem Maße in nicht von Alzheimer betroffenen Gehirnarealen auf. Daraus l{\"a}sst sich schließen, dass die Reduktion der EAAT1 Transkription eher ein Resultat eines in der Alzheimerschen Krankheit pr{\"a}senten, grundlegenden Krankheitsmechanismus ist als deren Ursache.}, language = {en} } @misc{OlsonDavidsonKliegletal.1984, author = {Olson, Richard K. and Davidson, Brian J. and Kliegl, Reinhold and Davies, Susan E.}, title = {Development of phonetic memory in disabled and normal readers}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-16888}, year = {1984}, abstract = {The development of phonetic codes in memory of 141 pairs of normal and disabled readers from 7.8 to 16.8 years of age was tested with a task adapted from L. S. Mark, D. Shankweiler, I. Y. Liberman, and C. A. Fowler (Memory \& Cognition, 1977, 5, 623-629) that measured false-positive errors in recognition memory for foil words which rhymed with words in the memory list versus foil words that did not rhyme. Our younger subjects replicated Mark et al., showing a larger difference between rhyming and nonrhyming false-positive errors for the normal readers. The older disabled readers' phonetic effect was comparable to that of the younger normal readers, suggesting a developmental lag in their use of phonetic coding in memory. Surprisingly, the normal readers' phonetic effect declined with age in the recognition task, but they maintained a significant advantage across age in the auditory WISC-R digit span recall test, and a test of phonological nonword decoding. The normals' decline with age in rhyming confusion may be due to an increase in the precision of their phonetic codes.}, language = {en} } @inproceedings{KempsonCann2006, author = {Kempson, Ruth and Cann, Ronnie}, title = {Dialogue pressures and syntactic change}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-10469}, year = {2006}, abstract = {On the basis of the Dynamic Syntax framework, this paper argues that the production pressures in dialogue determining alignment effects and given versus new informational effects also drive the shift from case-rich free word order systems without clitic pronouns into systems with clitic pronouns with rigid relative ordering. The paper introduces assumptions of Dynamic Syntax, in particular the building up of interpretation through structural underspecification and update, sketches the attendant account of production with close coordination of parsing and production strategies, and shows how what was at the Latin stage a purely pragmatic, production-driven decision about linear ordering becomes encoded in the clitics in theMedieval Spanish system which then through successive steps of routinization yield the modern systems with immediately pre-verbal fixed clitic templates.}, language = {en} } @phdthesis{Berger2012, author = {Berger, Florian}, title = {Different modes of cooperative transport by molecular motors}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-60319}, school = {Universit{\"a}t Potsdam}, year = {2012}, abstract = {Cargo transport by molecular motors is ubiquitous in all eukaryotic cells and is typically driven cooperatively by several molecular motors, which may belong to one or several motor species like kinesin, dynein or myosin. These motor proteins transport cargos such as RNAs, protein complexes or organelles along filaments, from which they unbind after a finite run length. Understanding how these motors interact and how their movements are coordinated and regulated is a central and challenging problem in studies of intracellular transport. In this thesis, we describe a general theoretical framework for the analysis of such transport processes, which enables us to explain the behavior of intracellular cargos based on the transport properties of individual motors and their interactions. Motivated by recent in vitro experiments, we address two different modes of transport: unidirectional transport by two identical motors and cooperative transport by actively walking and passively diffusing motors. The case of cargo transport by two identical motors involves an elastic coupling between the motors that can reduce the motors' velocity and/or the binding time to the filament. We show that this elastic coupling leads, in general, to four distinct transport regimes. In addition to a weak coupling regime, kinesin and dynein motors are found to exhibit a strong coupling and an enhanced unbinding regime, whereas myosin motors are predicted to attain a reduced velocity regime. All of these regimes, which we derive both by analytical calculations and by general time scale arguments, can be explored experimentally by varying the elastic coupling strength. In addition, using the time scale arguments, we explain why previous studies came to different conclusions about the effect and relevance of motor-motor interference. In this way, our theory provides a general and unifying framework for understanding the dynamical behavior of two elastically coupled molecular motors. The second mode of transport studied in this thesis is cargo transport by actively pulling and passively diffusing motors. Although these passive motors do not participate in active transport, they strongly enhance the overall cargo run length. When an active motor unbinds, the cargo is still tethered to the filament by the passive motors, giving the unbound motor the chance to rebind and continue its active walk. We develop a stochastic description for such cooperative behavior and explicitly derive the enhanced run length for a cargo transported by one actively pulling and one passively diffusing motor. We generalize our description to the case of several pulling and diffusing motors and find an exponential increase of the run length with the number of involved motors.}, language = {en} } @phdthesis{Moerbt2010, author = {M{\"o}rbt, Nora}, title = {Differential proteome analysis of human lung epithelial cells following exposure to aromatic volatile organic compounds}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-49257}, school = {Universit{\"a}t Potsdam}, year = {2010}, abstract = {The widespread usage of products containing volatile organic compounds (VOC) has lead to a general human exposure to these chemicals in work places or homes being suspected to contribute to the growing incidence of environmental diseases. Since the causal molecular mechanisms for the development of these disorders are not completely understood, the overall objective of this thesis was to investigate VOC-mediated molecular effects on human lung cells in vitro at VOC concentrations comparable to exposure scenarios below current occupational limits. Although differential expression of single proteins in response to VOCs has been reported, effects on complex protein networks (proteome) have not been investigated. However, this information is indispensable when trying to ascertain a mechanism for VOC action on the cellular level and establishing preventive strategies. For this study, the alveolar epithelial cell line A549 has been used. This cell line, cultured in a two-phase (air/liquid) model allows the most direct exposure and had been successfully applied for the analysis of inflammatory effects in response to VOCs. Mass spectrometric identification of 266 protein spots provided the first proteomic map of A549 cell line to this extent that may foster future work with this frequently used cellular model. The distribution of three typical air contaminants, monochlorobenzene (CB), styrene and 1,2 dichlorobenzene (1,2-DCB), between gas and liquid phase of the exposure model has been analyzed by gas chromatography. The obtained VOC partitioning was in agreement with available literature data. Subsequently the adapted in vitro system has been successfully employed to characterize the effects of the aromatic compound styrene on the proteome of A549 cells (Chapter 4). Initially, the cell toxicity has been assessed in order to ensure that most of the concentrations used in the following proteomic approach were not cytotoxic. Significant changes in abundance and phosphorylation in the total soluble protein fraction of A549 cells have been detected following styrene exposure. All proteins have been identified using mass spectrometry and the main cellular functions have been assigned. Validation experiments on protein and transcript level confirmed the results of the 2-DE experiments. From the results, two main cellular pathways have been identified that were induced by styrene: the cellular oxidative stress response combined with moderate pro-apoptotic signaling. Measurement of cellular reactive oxygen species (ROS) as well as the styrene-mediated induction of oxidative stress marker proteins confirmed the hypothesis of oxidative stress as the main molecular response mechanism. Finally, adducts of cellular proteins with the reactive styrene metabolite styrene 7,8 oxide (SO) have been identified. Especially the SO-adducts observed at both the reactive centers of thioredoxin reductase 1, which is a key element in the control of the cellular redox state, may be involved in styrene-induced ROS formation and apoptosis. A similar proteomic approach has been carried out with the halobenzenes CB and 1,2-DCB (Chapter 5). In accordance with previous findings, cell toxicity assessment showed enhanced toxicity compared to the one caused by styrene. Significant changes in abundance and phosphorylation of total soluble proteins of A549 cells have been detected following exposure to subtoxic concentrations of CB and 1,2-DCB. All proteins have been identified using mass spectrometry and the main cellular functions have been assigned. As for the styrene experiment, the results indicated two main pathways to be affected in the presence of chlorinated benzenes, cell death signaling and oxidative stress response. The strong induction of pro-apoptotic signaling has been confirmed for both treatments by detection of the cleavage of caspase 3. Likewise, the induction of redox-sensitive protein species could be correlated to an increased cellular level of ROS observed following CB treatment. Finally, common mechanisms in the cellular response to aromatic VOCs have been investigated (Chapter 6). A similar number (4.6-6.9\%) of all quantified protein spots showed differential expression (p<0.05) following cell exposure to styrene, CB or 1,2-DCB. However, not more than three protein spots showed significant regulation in the same direction for all three volatile compounds: voltage-dependent anion-selective channel protein 2, peroxiredoxin 1 and elongation factor 2. However, all of these proteins are important molecular targets in stress- and cell death-related signaling pathways.}, language = {en} } @inproceedings{Puls2007, author = {Puls, Joachim}, title = {Discussion : X-rays}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-18000}, year = {2007}, abstract = {Clumping in hot-star winds : proceedings of an international workshop held in Potsdam, Germany, 18. - 22. June 2007}, language = {en} } @inproceedings{StLouis2007, author = {St-Louis, N.}, title = {Discussion: Binaries, colliding winds, LBVs and high energy radiation}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-18155}, year = {2007}, abstract = {Clumping in hot-star winds : proceedings of an international workshop held in Potsdam, Germany, 18. - 22. June 2007}, language = {en} } @inproceedings{Vink2007, author = {Vink, J. S.}, title = {Discussion: Hydrodynamic modeling}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-18046}, year = {2007}, language = {en} } @inproceedings{Cassinelli2007, author = {Cassinelli, Joseph P.}, title = {Discussion: Magnetic fields, variability}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-18195}, year = {2007}, language = {en} } @inproceedings{Fullerton2007, author = {Fullerton, A. W.}, title = {Discussion: Spectral modeling}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-17917}, year = {2007}, language = {en} }