@phdthesis{Ziehe2005, author = {Ziehe, Andreas}, title = {Blind source separation based on joint diagonalization of matrices with applications in biomedical signal processing}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-5694}, school = {Universit{\"a}t Potsdam}, year = {2005}, abstract = {This thesis is concerned with the solution of the blind source separation problem (BSS). The BSS problem occurs frequently in various scientific and technical applications. In essence, it consists in separating meaningful underlying components out of a mixture of a multitude of superimposed signals. In the recent research literature there are two related approaches to the BSS problem: The first is known as Independent Component Analysis (ICA), where the goal is to transform the data such that the components become as independent as possible. The second is based on the notion of diagonality of certain characteristic matrices derived from the data. Here the goal is to transform the matrices such that they become as diagonal as possible. In this thesis we study the latter method of approximate joint diagonalization (AJD) to achieve a solution of the BSS problem. After an introduction to the general setting, the thesis provides an overview on particular choices for the set of target matrices that can be used for BSS by joint diagonalization. As the main contribution of the thesis, new algorithms for approximate joint diagonalization of several matrices with non-orthogonal transformations are developed. These newly developed algorithms will be tested on synthetic benchmark datasets and compared to other previous diagonalization algorithms. Applications of the BSS methods to biomedical signal processing are discussed and exemplified with real-life data sets of multi-channel biomagnetic recordings.}, subject = {Signaltrennung}, language = {en} } @phdthesis{Wust2015, author = {Wust, Johannes}, title = {Mixed workload managment for in-memory databases}, pages = {VIII, 167}, year = {2015}, language = {en} } @phdthesis{Wist2011, author = {Wist, Dominic}, title = {Attacking complexity in logic synthesis of asynchronous circuits}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59706}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Most of the microelectronic circuits fabricated today are synchronous, i.e. they are driven by one or several clock signals. Synchronous circuit design faces several fundamental challenges such as high-speed clock distribution, integration of multiple cores operating at different clock rates, reduction of power consumption and dealing with voltage, temperature, manufacturing and runtime variations. Asynchronous or clockless design plays a key role in alleviating these challenges, however the design and test of asynchronous circuits is much more difficult in comparison to their synchronous counterparts. A driving force for a widespread use of asynchronous technology is the availability of mature EDA (Electronic Design Automation) tools which provide an entire automated design flow starting from an HDL (Hardware Description Language) specification yielding the final circuit layout. Even though there was much progress in developing such EDA tools for asynchronous circuit design during the last two decades, the maturity level as well as the acceptance of them is still not comparable with tools for synchronous circuit design. In particular, logic synthesis (which implies the application of Boolean minimisation techniques) for the entire system's control path can significantly improve the efficiency of the resulting asynchronous implementation, e.g. in terms of chip area and performance. However, logic synthesis, in particular for asynchronous circuits, suffers from complexity problems. Signal Transitions Graphs (STGs) are labelled Petri nets which are a widely used to specify the interface behaviour of speed independent (SI) circuits - a robust subclass of asynchronous circuits. STG decomposition is a promising approach to tackle complexity problems like state space explosion in logic synthesis of SI circuits. The (structural) decomposition of STGs is guided by a partition of the output signals and generates a usually much smaller component STG for each partition member, i.e. a component STG with a much smaller state space than the initial specification. However, decomposition can result in component STGs that in isolation have so-called irreducible CSC conflicts (i.e. these components are not SI synthesisable anymore) even if the specification has none of them. A new approach is presented to avoid such conflicts by introducing internal communication between the components. So far, STG decompositions are guided by the finest output partitions, i.e. one output per component. However, this might not yield optimal circuit implementations. Efficient heuristics are presented to determine coarser partitions leading to improved circuits in terms of chip area. For the new algorithms correctness proofs are given and their implementations are incorporated into the decomposition tool DESIJ. The presented techniques are successfully applied to some benchmarks - including 'real-life' specifications arising in the context of control resynthesis - which delivered promising results.}, language = {en} } @phdthesis{Weise2021, author = {Weise, Matthias}, title = {Auswahl von Selektions- und Manipulationstechniken f{\"u}r Virtual Reality-Anwendungen}, doi = {10.25932/publishup-53458}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-534586}, school = {Universit{\"a}t Potsdam}, pages = {iii, 218}, year = {2021}, abstract = {Die stetige Weiterentwicklung von VR-Systemen bietet neue M{\"o}glichkeiten der Interaktion mit virtuellen Objekten im dreidimensionalen Raum, stellt Entwickelnde von VRAnwendungen aber auch vor neue Herausforderungen. Selektions- und Manipulationstechniken m{\"u}ssen unter Ber{\"u}cksichtigung des Anwendungsszenarios, der Zielgruppe und der zur Verf{\"u}gung stehenden Ein- und Ausgabeger{\"a}te ausgew{\"a}hlt werden. Diese Arbeit leistet einen Beitrag dazu, die Auswahl von passenden Interaktionstechniken zu unterst{\"u}tzen. Hierf{\"u}r wurde eine repr{\"a}sentative Menge von Selektions- und Manipulationstechniken untersucht und, unter Ber{\"u}cksichtigung existierender Klassifikationssysteme, eine Taxonomie entwickelt, die die Analyse der Techniken hinsichtlich interaktionsrelevanter Eigenschaften erm{\"o}glicht. Auf Basis dieser Taxonomie wurden Techniken ausgew{\"a}hlt, die in einer explorativen Studie verglichen wurden, um R{\"u}ckschl{\"u}sse auf die Dimensionen der Taxonomie zu ziehen und neue Indizien f{\"u}r Vor- und Nachteile der Techniken in spezifischen Anwendungsszenarien zu generieren. Die Ergebnisse der Arbeit m{\"u}nden in eine Webanwendung, die Entwickelnde von VR-Anwendungen gezielt dabei unterst{\"u}tzt, passende Selektions- und Manipulationstechniken f{\"u}r ein Anwendungsszenario auszuw{\"a}hlen, indem Techniken auf Basis der Taxonomie gefiltert und unter Verwendung der Resultate aus der Studie sortiert werden k{\"o}nnen.}, language = {de} } @phdthesis{Weigend2007, author = {Weigend, Michael}, title = {Intuitive Modelle der Informatik}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-940793-08-9}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-15787}, school = {Universit{\"a}t Potsdam}, pages = {331}, year = {2007}, abstract = {Intuitive Modelle der Informatik sind gedankliche Vorstellungen {\"u}ber informatische Konzepte, die mit subjektiver Gewissheit verbunden sind. Menschen verwenden sie, wenn sie die Arbeitsweise von Computerprogrammen nachvollziehen oder anderen erkl{\"a}ren, die logische Korrektheit eines Programms pr{\"u}fen oder in einem kreativen Prozess selbst Programme entwickeln. Intuitive Modelle k{\"o}nnen auf verschiedene Weise repr{\"a}sentiert und kommuniziert werden, etwa verbal-abstrakt, durch ablauf- oder strukturorientierte Abbildungen und Filme oder konkrete Beispiele. Diskutiert werden in dieser Arbeit grundlegende intuitive Modelle f{\"u}r folgende inhaltliche Aspekte einer Programmausf{\"u}hrung: Allokation von Aktivit{\"a}t bei einer Programmausf{\"u}hrung, Benennung von Entit{\"a}ten, Daten, Funktionen, Verarbeitung, Kontrollstrukturen zur Steuerung von Programml{\"a}ufen, Rekursion, Klassen und Objekte. Mit Hilfe eines Systems von Online-Spielen, der Python Visual Sandbox, werden die psychische Realit{\"a}t verschiedener intuitiver Modelle bei Programmieranf{\"a}ngern nachgewiesen und fehlerhafte Anwendungen (Fehlvorstellungen) identifiziert.}, language = {de} } @article{WegnerZenderLucke2015, author = {Wegner, Christian and Zender, Raphael and Lucke, Ulrike}, title = {ProtoSense}, series = {KEYCIT 2014 - Key Competencies in Informatics and ICT}, journal = {KEYCIT 2014 - Key Competencies in Informatics and ICT}, number = {7}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, issn = {1868-0844}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-82970}, pages = {405 -- 407}, year = {2015}, language = {en} } @phdthesis{Wang2011, author = {Wang, Long}, title = {X-tracking the usage interest on web sites}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-51077}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {The exponential expanding of the numbers of web sites and Internet users makes WWW the most important global information resource. From information publishing and electronic commerce to entertainment and social networking, the Web allows an inexpensive and efficient access to the services provided by individuals and institutions. The basic units for distributing these services are the web sites scattered throughout the world. However, the extreme fragility of web services and content, the high competence between similar services supplied by different sites, and the wide geographic distributions of the web users drive the urgent requirement from the web managers to track and understand the usage interest of their web customers. This thesis, "X-tracking the Usage Interest on Web Sites", aims to fulfill this requirement. "X" stands two meanings: one is that the usage interest differs from various web sites, and the other is that usage interest is depicted from multi aspects: internal and external, structural and conceptual, objective and subjective. "Tracking" shows that our concentration is on locating and measuring the differences and changes among usage patterns. This thesis presents the methodologies on discovering usage interest on three kinds of web sites: the public information portal site, e-learning site that provides kinds of streaming lectures and social site that supplies the public discussions on IT issues. On different sites, we concentrate on different issues related with mining usage interest. The educational information portal sites were the first implementation scenarios on discovering usage patterns and optimizing the organization of web services. In such cases, the usage patterns are modeled as frequent page sets, navigation paths, navigation structures or graphs. However, a necessary requirement is to rebuild the individual behaviors from usage history. We give a systematic study on how to rebuild individual behaviors. Besides, this thesis shows a new strategy on building content clusters based on pair browsing retrieved from usage logs. The difference between such clusters and the original web structure displays the distance between the destinations from usage side and the expectations from design side. Moreover, we study the problem on tracking the changes of usage patterns in their life cycles. The changes are described from internal side integrating conceptual and structure features, and from external side for the physical features; and described from local side measuring the difference between two time spans, and global side showing the change tendency along the life cycle. A platform, Web-Cares, is developed to discover the usage interest, to measure the difference between usage interest and site expectation and to track the changes of usage patterns. E-learning site provides the teaching materials such as slides, recorded lecture videos and exercise sheets. We focus on discovering the learning interest on streaming lectures, such as real medias, mp4 and flash clips. Compared to the information portal site, the usage on streaming lectures encapsulates the variables such as viewing time and actions during learning processes. The learning interest is discovered in the form of answering 6 questions, which covers finding the relations between pieces of lectures and the preference among different forms of lectures. We prefer on detecting the changes of learning interest on the same course from different semesters. The differences on the content and structure between two courses leverage the changes on the learning interest. We give an algorithm on measuring the difference on learning interest integrated with similarity comparison between courses. A search engine, TASK-Moniminer, is created to help the teacher query the learning interest on their streaming lectures on tele-TASK site. Social site acts as an online community attracting web users to discuss the common topics and share their interesting information. Compared to the public information portal site and e-learning web site, the rich interactions among users and web content bring the wider range of content quality, on the other hand, provide more possibilities to express and model usage interest. We propose a framework on finding and recommending high reputation articles in a social site. We observed that the reputation is classified into global and local categories; the quality of the articles having high reputation is related with the content features. Based on these observations, our framework is implemented firstly by finding the articles having global or local reputation, and secondly clustering articles based on their content relations, and then the articles are selected and recommended from each cluster based on their reputation ranks.}, language = {en} } @misc{Voigt2009, type = {Master Thesis}, author = {Voigt, Matthias}, title = {Entwicklung von bioinformatischen Visualisierungswerkzeugen f{\"u}r Metabolitdaten von N{\"a}hrstoffmangelsituationen bei Arabidopsis thaliana}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-33047}, school = {Universit{\"a}t Potsdam}, year = {2009}, abstract = {Diese Arbeit umfasst die Archivierung, Visualisierung anhand bioinformatischer Methoden und Interpretation eines vorhandenen Messdatensatz (Element [ICP-MS]-, Ionen [IC]- und Metabolitdaten [RP-HPLC und GC/TOF-MS]) der Pflanze Arabidopsis thaliana getrennt in Bl{\"a}tter und Wurzeln. Die Pflanzen wurden den sechs Mangelsituationen der N{\"a}hrstoffe Eisen, Kalium, Magnesium, Stickstoff, Phosphor und Schwefel ausgesetzt und zu neun Messzeitpunkten [0.5-, 1-, 2-, 3-, 4-, 5-, 6-, 7-in Tagen und „resupply" (vier Stunden nach dem vierten Tag)] analysiert. Es erfolgte die Integration der Messdaten in eine SQlite-Datenbank. Die Veranschaulichung erfolgte mit Hilfe der Programmiersprache R. Anhand einiger Pakete zur Erweiterung des Funktionsumfangs von R wurde erstens eine Schnittstelle zur SQLite- Datenbank hergestellt, was ein Abfragen an diese erm{\"o}glichte und zweitens verhalfen sie zu der Erstellung einer Reihe zus{\"a}tzlicher Darstellungsformen (Heatmap, Wireframe, PCA). Selbstgeschriebene Skripte erlaubten den Datenzugriff und die grafische Ausgabe als z. B. Heatmaps. In der Entstehung dieser Arbeit sind weiterhin zwei weitere Visualisierungsformen von PCA-Daten entwickelt worden: Das Abstandsdiagramm und die animierte PCA. Beides sind hilfreiche Werkzeuge zur Interpretation von PCA-Plots eines zeitlichen Verlaufes. Anhand der Darstellungen der Element- und Ionendaten ließen sich die N{\"a}hrstoffmangelsituationen durch Abnahme der entsprechenden Totalelemente und Ionen nachweisen. Weiterhin sind starke {\"A}hnlichkeiten der durch RP-HPLC bestimmten Metaboliten unter Eisen-, Kalium und Magnesiummangel erkannt worden. Allerdings gibt es nur eine geringe Anzahl an Interkationen der Metabolitgehalte, da der Großteil der Metabolitlevel im Vergleich zur Kontrolle unver{\"a}ndert blieb. Der Literaturvergleich mit zwei Publikationen, die den Phosphat- und Schwefelmangel in Arabidopsis thaliana untersuchten, zeigte ein durchwachsenes Ergebnis. Einerseits gab es eine gleiche Tendenz der verglichenen Aminos{\"a}uren zu verzeichen, aber andererseits wiesen die Visualisierungen auch Gegens{\"a}tzlichkeiten auf. Der Vergleich der mit RP-HPLC und GC/TOF-MS gemessenen Metaboliten erbrachte ein sehr kontroverses Ergebnis. Zum einen wurden {\"U}bereinstimmungen der gleichen Metaboliten durch gemeinsame Cluster in den Heatmaps beobachtet, zum anderen auch Widerspr{\"u}che, exemplarisch in den Abstandsdiagrammen der Bl{\"a}tterdaten jedes Verfahrens, in welchen unterschiedliche Abstandsh{\"o}hepunkte erkennbar sind.}, language = {de} } @article{Vierheller2014, author = {Vierheller, Janine}, title = {Exploratory Data Analysis}, series = {Process Design for Natural Scientists: an agile model-driven approach}, journal = {Process Design for Natural Scientists: an agile model-driven approach}, number = {500}, editor = {Lambrecht, Anna-Lena and Margaria, Tiziana}, publisher = {Axel Springer Verlag}, address = {Berlin}, isbn = {978-3-662-45005-5}, issn = {1865-0929}, pages = {110 -- 126}, year = {2014}, abstract = {In bioinformatics the term exploratory data analysis refers to different methods to get an overview of large biological data sets. Hence, it helps to create a framework for further analysis and hypothesis testing. The workflow facilitates this first important step of the data analysis created by high-throughput technologies. The results are different plots showing the structure of the measurements. The goal of the workflow is the automatization of the exploratory data analysis, but also the flexibility should be guaranteed. The basic tool is the free software R.}, language = {en} } @phdthesis{Videla2014, author = {Videla, Santiago}, title = {Reasoning on the response of logical signaling networks with answer set programming}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-71890}, school = {Universit{\"a}t Potsdam}, year = {2014}, abstract = {Deciphering the functioning of biological networks is one of the central tasks in systems biology. In particular, signal transduction networks are crucial for the understanding of the cellular response to external and internal perturbations. Importantly, in order to cope with the complexity of these networks, mathematical and computational modeling is required. We propose a computational modeling framework in order to achieve more robust discoveries in the context of logical signaling networks. More precisely, we focus on modeling the response of logical signaling networks by means of automated reasoning using Answer Set Programming (ASP). ASP provides a declarative language for modeling various knowledge representation and reasoning problems. Moreover, available ASP solvers provide several reasoning modes for assessing the multitude of answer sets. Therefore, leveraging its rich modeling language and its highly efficient solving capacities, we use ASP to address three challenging problems in the context of logical signaling networks: learning of (Boolean) logical networks, experimental design, and identification of intervention strategies. Overall, the contribution of this thesis is three-fold. Firstly, we introduce a mathematical framework for characterizing and reasoning on the response of logical signaling networks. Secondly, we contribute to a growing list of successful applications of ASP in systems biology. Thirdly, we present a software providing a complete pipeline for automated reasoning on the response of logical signaling networks.}, language = {en} } @article{TscherejkinaMorgielMoebert2018, author = {Tscherejkina, Anna and Morgiel, Anna and Moebert, Tobias}, title = {Computergest{\"u}tztes Training von sozio-emotionalen Kompetenzen durch Minispiele}, series = {E-Learning Symposium 2018}, journal = {E-Learning Symposium 2018}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, doi = {10.25932/publishup-42193}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-421937}, pages = {41 -- 52}, year = {2018}, abstract = {Das Training sozioemotionaler Kompetenzen ist gerade f{\"u}r Menschen mit Autismus n{\"u}tzlich. Ein solches Training kann mithilfe einer spielbasierten Anwendung effektiv gestaltet werden. Zwei Minispiele, Mimikry und Emo-Mahjong, wurden realisiert und hinsichtlich User Experience evaluiert. Die jeweiligen Konzepte und die Evaluationsergebnisse sollen hier vorgestellt werden.}, language = {de} } @misc{Trapp2007, type = {Master Thesis}, author = {Trapp, Matthias}, title = {Analysis and exploration of virtual 3D city models using 3D information lenses}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-13930}, school = {Universit{\"a}t Potsdam}, year = {2007}, abstract = {This thesis addresses real-time rendering techniques for 3D information lenses based on the focus \& context metaphor. It analyzes, conceives, implements, and reviews its applicability to objects and structures of virtual 3D city models. In contrast to digital terrain models, the application of focus \& context visualization to virtual 3D city models is barely researched. However, the purposeful visualization of contextual data of is extreme importance for the interactive exploration and analysis of this field. Programmable hardware enables the implementation of new lens techniques, that allow the augmentation of the perceptive and cognitive quality of the visualization compared to classical perspective projections. A set of 3D information lenses is integrated into a 3D scene-graph system: • Occlusion lenses modify the appearance of virtual 3D city model objects to resolve their occlusion and consequently facilitate the navigation. • Best-view lenses display city model objects in a priority-based manner and mediate their meta information. Thus, they support exploration and navigation of virtual 3D city models. • Color and deformation lenses modify the appearance and geometry of 3D city models to facilitate their perception. The presented techniques for 3D information lenses and their application to virtual 3D city models clarify their potential for interactive visualization and form a base for further development.}, language = {en} } @phdthesis{Trapp2013, author = {Trapp, Matthias}, title = {Interactive rendering techniques for focus+context visualization of 3D geovirtual environments}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-66824}, school = {Universit{\"a}t Potsdam}, year = {2013}, abstract = {This thesis introduces a collection of new real-time rendering techniques and applications for focus+context visualization of interactive 3D geovirtual environments such as virtual 3D city and landscape models. These environments are generally characterized by a large number of objects and are of high complexity with respect to geometry and textures. For these reasons, their interactive 3D rendering represents a major challenge. Their 3D depiction implies a number of weaknesses such as occlusions, cluttered image contents, and partial screen-space usage. To overcome these limitations and, thus, to facilitate the effective communication of geo-information, principles of focus+context visualization can be used for the design of real-time 3D rendering techniques for 3D geovirtual environments (see Figure). In general, detailed views of a 3D geovirtual environment are combined seamlessly with abstracted views of the context within a single image. To perform the real-time image synthesis required for interactive visualization, dedicated parallel processors (GPUs) for rasterization of computer graphics primitives are used. For this purpose, the design and implementation of appropriate data structures and rendering pipelines are necessary. The contribution of this work comprises the following five real-time rendering methods: • The rendering technique for 3D generalization lenses enables the combination of different 3D city geometries (e.g., generalized versions of a 3D city model) in a single image in real time. The method is based on a generalized and fragment-precise clipping approach, which uses a compressible, raster-based data structure. It enables the combination of detailed views in the focus area with the representation of abstracted variants in the context area. • The rendering technique for the interactive visualization of dynamic raster data in 3D geovirtual environments facilitates the rendering of 2D surface lenses. It enables a flexible combination of different raster layers (e.g., aerial images or videos) using projective texturing for decoupling image and geometry data. Thus, various overlapping and nested 2D surface lenses of different contents can be visualized interactively. • The interactive rendering technique for image-based deformation of 3D geovirtual environments enables the real-time image synthesis of non-planar projections, such as cylindrical and spherical projections, as well as multi-focal 3D fisheye-lenses and the combination of planar and non-planar projections. • The rendering technique for view-dependent multi-perspective views of 3D geovirtual environments, based on the application of global deformations to the 3D scene geometry, can be used for synthesizing interactive panorama maps to combine detailed views close to the camera (focus) with abstract views in the background (context). This approach reduces occlusions, increases the usage the available screen space, and reduces the overload of image contents. • The object-based and image-based rendering techniques for highlighting objects and focus areas inside and outside the view frustum facilitate preattentive perception. The concepts and implementations of interactive image synthesis for focus+context visualization and their selected applications enable a more effective communication of spatial information, and provide building blocks for design and development of new applications and systems in the field of 3D geovirtual environments.}, language = {en} } @phdthesis{Tiwari2019, author = {Tiwari, Abhishek}, title = {Enhancing Users' Privacy: Static Resolution of the Dynamic Properties of Android}, school = {Universit{\"a}t Potsdam}, pages = {xiii, 111}, year = {2019}, abstract = {The usage of mobile devices is rapidly growing with Android being the most prevalent mobile operating system. Thanks to the vast variety of mobile applications, users are preferring smartphones over desktops for day to day tasks like Internet surfing. Consequently, smartphones store a plenitude of sensitive data. This data together with the high values of smartphones make them an attractive target for device/data theft (thieves/malicious applications). Unfortunately, state-of-the-art anti-theft solutions do not work if they do not have an active network connection, e.g., if the SIM card was removed from the device. In the majority of these cases, device owners permanently lose their smartphone together with their personal data, which is even worse. Apart from that malevolent applications perform malicious activities to steal sensitive information from smartphones. Recent research considered static program analysis to detect dangerous data leaks. These analyses work well for data leaks due to inter-component communication, but suffer from shortcomings for inter-app communication with respect to precision, soundness, and scalability. This thesis focuses on enhancing users' privacy on Android against physical device loss/theft and (un)intentional data leaks. It presents three novel frameworks: (1) ThiefTrap, an anti-theft framework for Android, (2) IIFA, a modular inter-app intent information flow analysis of Android applications, and (3) PIAnalyzer, a precise approach for PendingIntent vulnerability analysis. ThiefTrap is based on a novel concept of an anti-theft honeypot account that protects the owner's data while preventing a thief from resetting the device. We implemented the proposed scheme and evaluated it through an empirical user study with 35 participants. In this study, the owner's data could be protected, recovered, and anti-theft functionality could be performed unnoticed from the thief in all cases. IIFA proposes a novel approach for Android's inter-component/inter-app communication (ICC/IAC) analysis. Our main contribution is the first fully automatic, sound, and precise ICC/IAC information flow analysis that is scalable for realistic apps due to modularity, avoiding combinatorial explosion: Our approach determines communicating apps using short summaries rather than inlining intent calls between components and apps, which requires simultaneously analyzing all apps installed on a device. We evaluate IIFA in terms of precision, recall, and demonstrate its scalability to a large corpus of real-world apps. IIFA reports 62 problematic ICC-/IAC-related information flows via two or more apps/components. PIAnalyzer proposes a novel approach to analyze PendingIntent related vulnerabilities. PendingIntents are a powerful and universal feature of Android for inter-component communication. We empirically evaluate PIAnalyzer on a set of 1000 randomly selected applications and find 1358 insecure usages of PendingIntents, including 70 severe vulnerabilities.}, language = {en} } @phdthesis{Thiele2011, author = {Thiele, Sven}, title = {Modeling biological systems with Answer Set Programming}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-59383}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Biology has made great progress in identifying and measuring the building blocks of life. The availability of high-throughput methods in molecular biology has dramatically accelerated the growth of biological knowledge for various organisms. The advancements in genomic, proteomic and metabolomic technologies allow for constructing complex models of biological systems. An increasing number of biological repositories is available on the web, incorporating thousands of biochemical reactions and genetic regulations. Systems Biology is a recent research trend in life science, which fosters a systemic view on biology. In Systems Biology one is interested in integrating the knowledge from all these different sources into models that capture the interaction of these entities. By studying these models one wants to understand the emerging properties of the whole system, such as robustness. However, both measurements as well as biological networks are prone to considerable incompleteness, heterogeneity and mutual inconsistency, which makes it highly non-trivial to draw biologically meaningful conclusions in an automated way. Therefore, we want to promote Answer Set Programming (ASP) as a tool for discrete modeling in Systems Biology. ASP is a declarative problem solving paradigm, in which a problem is encoded as a logic program such that its answer sets represent solutions to the problem. ASP has intrinsic features to cope with incompleteness, offers a rich modeling language and highly efficient solving technology. We present ASP solutions, for the analysis of genetic regulatory networks, determining consistency with observed measurements and identifying minimal causes for inconsistency. We extend this approach for computing minimal repairs on model and data that restore consistency. This method allows for predicting unobserved data even in case of inconsistency. Further, we present an ASP approach to metabolic network expansion. This approach exploits the easy characterization of reachability in ASP and its various reasoning methods, to explore the biosynthetic capabilities of metabolic reaction networks and generate hypotheses for extending the network. Finally, we present the BioASP library, a Python library which encapsulates our ASP solutions into the imperative programming paradigm. The library allows for an easy integration of ASP solution into system rich environments, as they exist in Systems Biology.}, language = {en} } @article{Teske2014, author = {Teske, Daniel}, title = {Geocoder accuracy ranking}, series = {Process design for natural scientists: an agile model-driven approach}, journal = {Process design for natural scientists: an agile model-driven approach}, number = {500}, publisher = {Springer}, address = {Berlin}, isbn = {978-3-662-45005-5}, issn = {1865-0929}, pages = {161 -- 174}, year = {2014}, abstract = {Finding an address on a map is sometimes tricky: the chosen map application may be unfamiliar with the enclosed region. There are several geocoders on the market, they have different databases and algorithms to compute the query. Consequently, the geocoding results differ in their quality. Fortunately the geocoders provide a rich set of metadata. The workflow described in this paper compares this metadata with the aim to find out which geocoder is offering the best-fitting coordinate for a given address.}, language = {en} } @article{TavakoliAlirezazadehHedayatipouretal.2021, author = {Tavakoli, Hamad and Alirezazadeh, Pendar and Hedayatipour, Ava and Nasib, A. H. Banijamali and Landwehr, Niels}, title = {Leaf image-based classification of some common bean cultivars using discriminative convolutional neural networks}, series = {Computers and electronics in agriculture : COMPAG online ; an international journal}, volume = {181}, journal = {Computers and electronics in agriculture : COMPAG online ; an international journal}, publisher = {Elsevier}, address = {Amsterdam [u.a.]}, issn = {0168-1699}, doi = {10.1016/j.compag.2020.105935}, pages = {11}, year = {2021}, abstract = {In recent years, many efforts have been made to apply image processing techniques for plant leaf identification. However, categorizing leaf images at the cultivar/variety level, because of the very low inter-class variability, is still a challenging task. In this research, we propose an automatic discriminative method based on convolutional neural networks (CNNs) for classifying 12 different cultivars of common beans that belong to three various species. We show that employing advanced loss functions, such as Additive Angular Margin Loss and Large Margin Cosine Loss, instead of the standard softmax loss function for the classification can yield better discrimination between classes and thereby mitigate the problem of low inter-class variability. The method was evaluated by classifying species (level I), cultivars from the same species (level II), and cultivars from different species (level III), based on images from the leaf foreside and backside. The results indicate that the performance of the classification algorithm on the leaf backside image dataset is superior. The maximum mean classification accuracies of 95.86, 91.37 and 86.87\% were obtained at the levels I, II and III, respectively. The proposed method outperforms the previous relevant works and provides a reliable approach for plant cultivars identification.}, language = {en} } @article{SteinertStabernack2022, author = {Steinert, Fritjof and Stabernack, Benno}, title = {Architecture of a low latency H.264/AVC video codec for robust ML based image classification how region of interests can minimize the impact of coding artifacts}, series = {Journal of Signal Processing Systems for Signal, Image, and Video Technology}, volume = {94}, journal = {Journal of Signal Processing Systems for Signal, Image, and Video Technology}, number = {7}, publisher = {Springer}, address = {New York}, issn = {1939-8018}, doi = {10.1007/s11265-021-01727-2}, pages = {693 -- 708}, year = {2022}, abstract = {The use of neural networks is considered as the state of the art in the field of image classification. A large number of different networks are available for this purpose, which, appropriately trained, permit a high level of classification accuracy. Typically, these networks are applied to uncompressed image data, since a corresponding training was also carried out using image data of similar high quality. However, if image data contains image errors, the classification accuracy deteriorates drastically. This applies in particular to coding artifacts which occur due to image and video compression. Typical application scenarios for video compression are narrowband transmission channels for which video coding is required but a subsequent classification is to be carried out on the receiver side. In this paper we present a special H.264/Advanced Video Codec (AVC) based video codec that allows certain regions of a picture to be coded with near constant picture quality in order to allow a reliable classification using neural networks, whereas the remaining image will be coded using constant bit rate. We have combined this feature with the ability to run with lowest latency properties, which is usually also required in remote control applications scenarios. The codec has been implemented as a fully hardwired High Definition video capable hardware architecture which is suitable for Field Programmable Gate Arrays.}, language = {en} } @book{Stechert2009, author = {Stechert, Peer}, title = {Fachdidaktische Diskussion von Informatiksystemen und der Kompetenzentwicklung im Informatikunterricht}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-024-3}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-37959}, publisher = {Universit{\"a}t Potsdam}, pages = {xiv, 359}, year = {2009}, abstract = {In der vorliegenden Arbeit wird ein Unterrichtsmodell zur Kompetenzentwicklung mit Informatiksystemen f{\"u}r die Sekundarstufe II vorgestellt. Der Bedarf wird u. a. damit begr{\"u}ndet, dass Informatiksysteme zu Beginn des 21. Jahrhunderts allgegenw{\"a}rtig sind (Kapitel 1). F{\"u}r Kompetenzentwicklung mit Informatiksystemen sind diese in ihrer Einheit aus Hardware, Software und Vernetzung anhand ihres nach außen sichtbaren Verhaltens, der inneren Struktur und Implementierungsaspekten zu analysieren. Ausgehend vom Kompetenzbegriff (Kapitel 2) und dem Informatiksystembegriff (Kapitel 3) erfolgt eine Analyse des fachdidaktischen Forschungsstandes zur Kompetenzentwicklung mit Informatiksystemen. Die Ergebnisse lassen sich in die Bereiche (1) Bildungsziele, (2) Unterrichtsinhalte, (3) Lehr-Lernmethodik und (4) Lehr-Lernmedien aufteilen (Kapitel 4). In Kapitel 5 wird die Unterrichtsmodellentwicklung beschrieben. Den Zugang zu Informatiksystemen bildet in der vorliegenden Dissertationsschrift das nach außen sichtbare Verhalten. Es erfolgt eine Fokussierung auf vernetzte fundamentale Ideen der Informatik und Strukturmodelle von Informatiksystemen als Unterrichtsinhalte. Es wird begr{\"u}ndet, dass ausgew{\"a}hlte objektorientierte Entwurfsmuster vernetzte fundamentale Ideen repr{\"a}sentieren. In Abschnitt 5.4 werden dementsprechend Entwurfsmuster als Wissensrepr{\"a}sentation f{\"u}r vernetzte fundamentale Ideen klassifiziert. Das systematische Erkunden des Verhaltens von Informatiksystemen wird im Informatikunterricht bisher kaum thematisiert. Es werden Sch{\"u}lert{\"a}tigkeiten in Anlehnung an Unterrichtsexperimente angegeben, die Sch{\"u}ler unterst{\"u}tzen, Informatiksysteme bewusst und gezielt anzuwenden (Abschnitt 5.5). Bei dieser Lehr-Lernmethodik werden das nach außen sichtbare Verhalten von Informatiksystemen, im Sinne einer Black-Box, und das Wechselspiel von Verhalten und Struktur bei vorliegender Implementierung des Systems als White-Box analysiert. Die Adressierung schrittweise h{\"o}herer kognitiver Niveaustufen wird in die Entwicklung einbezogen. Unterst{\"u}tzend wird f{\"u}r das Unterrichtsmodell lernf{\"o}rderliche Software gestaltet, die vernetzte fundamentale Ideen in Entwurfsmustern und das Experimentieren aufgreift (Abschnitt 5.6). Schwerpunkte bilden im Unterrichtsmodell zwei Arten von lernf{\"o}rderlicher Software: (1) Die Lernsoftware Pattern Park wurde von einer studentischen Projektgruppe entwickelt. In ihr k{\"o}nnen in Entwurfsmustern enthaltene fundamentale Ideen der Informatik {\"u}ber ihren Lebensweltbezug im Szenario eines Freizeitparks analysiert werden. (2) Als weitere Art Lernsoftware werden kleine Programme eingesetzt, deren innere Struktur durch ausgew{\"a}hlte Entwurfsmuster gebildet und deren Verhalten direkt durch die darin enthaltenen fundamentalen Ideen bestimmt wird. Diese Programme k{\"o}nnen durch die Experimente im Unterricht systematisch untersucht werden. Mit dem Ziel, die normative Perspektive um R{\"u}ckkopplung mit der Praxis zu erg{\"a}nzen, werden zwei Erprobungen im Informatikunterricht vorgenommen. Diese liefern Erkenntnisse zur Machbarkeit des Unterrichtsmodells und dessen Akzeptanz durch die Sch{\"u}ler (Kapitel 6 und 8). Exemplarisch umgesetzt werden die Themen Zugriffskontrolle mit dem Proxymuster, Iteration mit dem Iteratormuster und Systemzust{\"a}nde mit dem Zustandsmuster. Der intensive Austausch mit Informatiklehrpersonen in der Kooperationsschule {\"u}ber Informatiksysteme und Kompetenzentwicklung sowie die Durchf{\"u}hrung von zwei Lehrerfortbildungen erg{\"a}nzen die Beobachtungen im unterrichtlichen Geschehen. Die erste Unterrichtserprobung resultiert in einer Weiterentwicklung des Unterrichtsmodells zu Informatiksystemen und Kompetenzentwicklung (Kapitel 7). Darin erfolgt eine Fokussierung auf das nach außen sichtbare Verhalten von Informatiksystemen und eine Verfeinerung der Perspektiven auf innere Struktur und ausgew{\"a}hlte Implementierungsaspekte. Anschließend wird die zweite Unterrichtserprobung durchgef{\"u}hrt und evaluiert (Kapitel 8). Am Schluss der Forschungsarbeit steht ein in empirischen Phasen erprobtes Unterrichtsmodell.}, subject = {Informatik}, language = {de} } @phdthesis{Smirnov2011, author = {Smirnov, Sergey}, title = {Business process model abstraction}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-60258}, school = {Universit{\"a}t Potsdam}, year = {2011}, abstract = {Business process models are used within a range of organizational initiatives, where every stakeholder has a unique perspective on a process and demands the respective model. As a consequence, multiple process models capturing the very same business process coexist. Keeping such models in sync is a challenge within an ever changing business environment: once a process is changed, all its models have to be updated. Due to a large number of models and their complex relations, model maintenance becomes error-prone and expensive. Against this background, business process model abstraction emerged as an operation reducing the number of stored process models and facilitating model management. Business process model abstraction is an operation preserving essential process properties and leaving out insignificant details in order to retain information relevant for a particular purpose. Process model abstraction has been addressed by several researchers. The focus of their studies has been on particular use cases and model transformations supporting these use cases. This thesis systematically approaches the problem of business process model abstraction shaping the outcome into a framework. We investigate the current industry demand in abstraction summarizing it in a catalog of business process model abstraction use cases. The thesis focuses on one prominent use case where the user demands a model with coarse-grained activities and overall process ordering constraints. We develop model transformations that support this use case starting with the transformations based on process model structure analysis. Further, abstraction methods considering the semantics of process model elements are investigated. First, we suggest how semantically related activities can be discovered in process models-a barely researched challenge. The thesis validates the designed abstraction methods against sets of industrial process models and discusses the method implementation aspects. Second, we develop a novel model transformation, which combined with the related activity discovery allows flexible non-hierarchical abstraction. In this way this thesis advocates novel model transformations that facilitate business process model management and provides the foundations for innovative tool support.}, language = {en} }