@article{LeachBeisnerCareyetal.2018, author = {Leach, Taylor H. and Beisner, Beatrix E. and Carey, Cayelan C. and Pernica, Patricia and Rose, Kevin C. and Huot, Yannick and Brentrup, Jennifer A. and Domaizon, Isabelle and Grossart, Hans-Peter and Ibelings, Bastiaan W. and Jacquet, Stephan and Kelly, Patrick T. and Rusak, James A. and Stockwell, Jason D. and Straile, Dietmar and Verburg, Piet}, title = {Patterns and drivers of deep chlorophyll maxima structure in 100 lakes}, series = {Limnology and oceanography}, volume = {63}, journal = {Limnology and oceanography}, number = {2}, publisher = {Wiley}, address = {Hoboken}, issn = {0024-3590}, doi = {10.1002/lno.10656}, pages = {628 -- 646}, year = {2018}, abstract = {The vertical distribution of chlorophyll in stratified lakes and reservoirs frequently exhibits a maximum peak deep in the water column, referred to as the deep chlorophyll maximum (DCM). DCMs are ecologically important hot spots of primary production and nutrient cycling, and their location can determine vertical habitat gradients for primary consumers. Consequently, the drivers of DCM structure regulate many characteristics of aquatic food webs and biogeochemistry. Previous studies have identified light and thermal stratification as important drivers of summer DCM depth, but their relative importance across a broad range of lakes is not well resolved. We analyzed profiles of chlorophyll fluorescence, temperature, and light during summer stratification from 100 lakes in the Global Lake Ecological Observatory Network (GLEON) and quantified two characteristics of DCM structure: depth and thickness. While DCMs do form in oligotrophic lakes, we found that they can also form in eutrophic to dystrophic lakes. Using a random forest algorithm, we assessed the relative importance of variables associated with light attenuation vs. thermal stratification for predicting DCM structure in lakes that spanned broad gradients of morphometry and transparency. Our analyses revealed that light attenuation was a more important predictor of DCM depth than thermal stratification and that DCMs deepen with increasing lake clarity. DCM thickness was best predicted by lake size with larger lakes having thicker DCMs. Additionally, our analysis demonstrates that the relative importance of light and thermal stratification on DCM structure is not uniform across a diversity of lake types.}, language = {en} } @article{HoltzmanTackmanCareyetal.2019, author = {Holtzman, Nicholas S. and Tackman, Allison M. and Carey, Angela L. and Brucks, Melanie S. and Kuefner, Albrecht C. P. and Deters, Fenne Grosse and Back, Mitja D. and Donnellan, M. Brent and Pennebaker, James W. and Sherman, Ryne A. and Mehl, Matthias R.}, title = {Linguistic Markers of Grandiose Narcissism: A LIWC Analysis of 15 Samples}, series = {Journal of Language and Social Psychology}, volume = {38}, journal = {Journal of Language and Social Psychology}, number = {5-6}, publisher = {Sage Publ.}, address = {Thousand Oaks}, issn = {0261-927X}, doi = {10.1177/0261927X19871084}, pages = {773 -- 786}, year = {2019}, abstract = {Narcissism is unrelated to using first-person singular pronouns. Whether narcissism is linked to other language use remains unclear. We aimed to identify linguistic markers of narcissism. We applied the Linguistic Inquiry and Word Count to texts (k = 15; N = 4,941). The strongest positive correlates were using words related to sports, second-person pronouns, and swear words. The strongest negative correlates were using anxiety/fear words, tentative words, and words related to sensory/perceptual processes. Effects were small (each |r| < .10).}, language = {en} } @article{VanHoutTachmazidouBackmanetal.2020, author = {Van Hout, Cristopher V. and Tachmazidou, Ioanna and Backman, Joshua D. and Hoffman, Joshua D. and Liu, Daren and Pandey, Ashutosh K. and Gonzaga-Jauregui, Claudia and Khalid, Shareef and Ye, Bin and Banerjee, Nilanjana and Li, Alexander H. and O'Dushlaine, Colm and Marcketta, Anthony and Staples, Jeffrey and Schurmann, Claudia and Hawes, Alicia and Maxwell, Evan and Barnard, Leland and Lopez, Alexander and Penn, John and Habegger, Lukas and Blumenfeld, Andrew L. and Bai, Xiaodong and O'Keeffe, Sean and Yadav, Ashish and Praveen, Kavita and Jones, Marcus and Salerno, William J. and Chung, Wendy K. and Surakka, Ida and Willer, Cristen J. and Hveem, Kristian and Leader, Joseph B. and Carey, David J. and Ledbetter, David H. and Cardon, Lon and Yancopoulos, George D. and Economides, Aris and Coppola, Giovanni and Shuldiner, Alan R. and Balasubramanian, Suganthi and Cantor, Michael and Nelson, Matthew R. and Whittaker, John and Reid, Jeffrey G. and Marchini, Jonathan and Overton, John D. and Scott, Robert A. and Abecasis, Goncalo R. and Yerges-Armstrong, Laura M. and Baras, Aris}, title = {Exome sequencing and characterization of 49,960 individuals in the UK Biobank}, series = {Nature : the international weekly journal of science}, volume = {586}, journal = {Nature : the international weekly journal of science}, number = {7831}, publisher = {Macmillan Publishers Limited}, address = {London}, organization = {Regeneron Genetics Ctr}, issn = {0028-0836}, doi = {10.1038/s41586-020-2853-0}, pages = {749 -- 756}, year = {2020}, abstract = {The UK Biobank is a prospective study of 502,543 individuals, combining extensive phenotypic and genotypic data with streamlined access for researchers around the world(1). Here we describe the release of exome-sequence data for the first 49,960 study participants, revealing approximately 4 million coding variants (of which around 98.6\% have a frequency of less than 1\%). The data include 198,269 autosomal predicted loss-of-function (LOF) variants, a more than 14-fold increase compared to the imputed sequence. Nearly all genes (more than 97\%) had at least one carrier with a LOF variant, and most genes (more than 69\%) had at least ten carriers with a LOF variant. We illustrate the power of characterizing LOF variants in this population through association analyses across 1,730 phenotypes. In addition to replicating established associations, we found novel LOF variants with large effects on disease traits, includingPIEZO1on varicose veins,COL6A1on corneal resistance,MEPEon bone density, andIQGAP2andGMPRon blood cell traits. We further demonstrate the value of exome sequencing by surveying the prevalence of pathogenic variants of clinical importance, and show that 2\% of this population has a medically actionable variant. Furthermore, we characterize the penetrance of cancer in carriers of pathogenicBRCA1andBRCA2variants. Exome sequences from the first 49,960 participants highlight the promise of genome sequencing in large population-based studies and are now accessible to the scientific community.
Exome sequences from the first 49,960 participants in the UK Biobank highlight the promise of genome sequencing in large population-based studies and are now accessible to the scientific community.}, language = {en} } @article{TranMaiNguyenetal.2018, author = {Tran, C. T. and Mai, N. T. and Nguyen, V. T. and Nguyen, H. X. and Meharg, A. and Carey, M. and Dultz, S. and Marone, F. and Cichy, Sarah Bettina and Nguyen, Minh N.}, title = {Phytolith-associated potassium in fern}, series = {Soil use and Management}, volume = {34}, journal = {Soil use and Management}, number = {1}, publisher = {Wiley}, address = {Hoboken}, issn = {0266-0032}, doi = {10.1111/sum.12409}, pages = {28 -- 36}, year = {2018}, abstract = {In recent time, phytoliths (silicon deposition between plant cells) have been recognized as an important nutrient source for crops. The work presented here aims at highlighting the potential of phytolith-occluded K pool in ferns. Dicranopteris linearis (D.linearis) is a common fern in the humid subtropical and tropical regions. Burning of the fern D.linearis is, in slash-and-burn regions, a common practice to prepare the soil before planting. We characterised the phytolith-rich ash derived from the fern D.linearis and phytolith-associated potassium (K) (phytK), using X-ray tomographic microscopy in combination with kinetic batch experiments. D.linearis contains up to 3.9g K/kgd.wt, including K subcompartmented in phytoliths. X-ray tomographic microscopy visualized an interembedding structure between organic matter and silica, particularly in leaves. Corelease of K and Si observed in the batch experiments confirmed that the dissolution of ash phytoliths is one of major factors controlling K release. Under heat treatment, a part of the K is made available, while the remainder entrapped into phytoliths (ca. 2.0-3.3\%) is unavailable until the phytoliths are dissolved. By enhanced removal of organic phases, or forming more stable silica phases, heat treatment changes dissolution properties of the phytoliths, affecting K release for crops and soils. The maximum releases of soluble K and Si were observed for the phytoliths treated at 500-800 degrees C. For quantitative approaches for the K provision of plants from the soil phytK pool in soils, factors regulating phytolith dissolution rate have to be considered.}, language = {en} } @article{NguyenMehargCareyetal.2019, author = {Nguyen, Minh N. and Meharg, Andy A. and Carey, Manus and Dultz, Stefan and Marone, Federica and Cichy, Sarah Bettina and Tran, Chinh T. and Le, Giang H. and Mai, Nga T. and Nguyen, Thinh T. H.}, title = {Fern, Dicranopteris linearis, derived phytoliths in soil}, series = {European journal of soil science}, volume = {70}, journal = {European journal of soil science}, number = {3}, publisher = {Wiley}, address = {Hoboken}, issn = {1351-0754}, doi = {10.1111/ejss.12754}, pages = {507 -- 517}, year = {2019}, abstract = {Ferns are among the most popular groups of plants in the tropics and subtropics, and their role as carbon sequestrators has been widely recognized. However, there is little understanding of the silicaceous structures (phytoliths) of ferns, rate of phytolith turnover, the consequences for organic matter sequestered in phytoliths and consequences for other soil properties. In the study reported here, high-resolution X-ray tomographic microscopy and chemical characterization were applied to examine the traits of phytoliths of the fern Dicranopteris linearis (Burm.f.) Underw. (D. linearis), with a focus on their dissolution properties and accumulation in northern Vietnamese soils in relation to soil properties. Tomographic images revealed an inter-embedding structure of silica and organic matter, especially in leaf-derived material. We propose that organic matter and silica can preserve each other against decomposition. In batch experiments, there was a relatively small rate of dissolution of phytoliths with dry ashing and subsequent H2O2 treatment. Silicon (Si) dissolution for D. linearis phytolith samples was much less than that for rice phytoliths. Despite the fact that the aluminum (Al) content was large in D. linearis leaves, batch dissolution data did not confirm a relation between Al and the slow rate of phytolith dissolution. The soil phytolith content varied from 0.9 to 7.5 g kg(-1) in the topsoil across the mountainous areas in northern Vietnam, whereas it tended to be smaller in the subsoil. The data indicate a relation between phytolith and soil organic matter, clay content, oxalate-soluble Al and electrical conductivity, suggesting that these soil properties are among the important factors affecting the size of the soil phytolith Si pool. Highlights}, language = {en} } @article{BaumgaertelCarey2001, author = {Baumg{\"a}rtel, Hellmut and Carey, A.}, title = {Hilbert systems for actions of the circle group}, year = {2001}, language = {en} } @book{BaumgaertelCarey2000, author = {Baumg{\"a}rtel, Hellmut and Carey, A.}, title = {Hilbert systems for actions of the circle group}, series = {ESI-Preprint / Erwin-Schr{\"o}der-Institut f{\"u}r Mathematische Physik, Wien}, volume = {940, 2000}, journal = {ESI-Preprint / Erwin-Schr{\"o}der-Institut f{\"u}r Mathematische Physik, Wien}, publisher = {Erwin-Schr{\"o}der-Institut f{\"u}r Mathematische Physik}, address = {Wien}, pages = {14 S.}, year = {2000}, language = {en} }