@misc{vanderKroefKoszinskiGrinatetal.2020, author = {van der Kroef, Ilona and Koszinski, Sylvia and Grinat, Michael and van der Meij, Marijn W. and Hierold, Wilfried and S{\"u}dekum, Wolfgang and Sommer, Michael}, title = {Digital mapping of buried soil horizons using 2D and pseudo-3D geoelectrical measurements in a ground moraine landscape}, series = {European journal of soil science : EJSS}, volume = {71}, journal = {European journal of soil science : EJSS}, number = {1}, publisher = {Wiley}, address = {Hoboken}, issn = {1351-0754}, pages = {10 -- 26}, year = {2020}, abstract = {The identification of buried soil horizons in agricultural landscapes helps to quantify sediment budgets and erosion-related carbon dynamics. High-resolution mapping of buried horizons using conventional soil surveys is destructive and time consuming. Geoelectrical sensors can offer a fast and non-destructive alternative for determining horizon positions and properties. In this paper, we compare the suitability of several geoelectrical methods for measuring the depth to buried horizons (Apb, Ahb and Hab) in the hummocky ground moraine landscape of northeastern Germany. Soil profile descriptions were developed for 269 locations within a 6-ha experimental field "CarboZALF-D". A stepwise linear discriminant analysis (LDA) estimated the lateral position of the buried horizons using electromagnetic induction data and terrain attributes. To predict the depth of a buried horizon, multiple linear regression (MLR) was used for both a 120-m transect and a 0.2-ha pseudo-three-dimensional (3D) area. At these scales, apparent electrical conductivity (ECa), electrical resistivity (ER) and terrain attributes were used as independent variables. The LDA accurately predicted Apb- and Ahb-horizons (a correct classification of 93\%). The LDA of the Hab-horizon had a misclassification of 24\%, which was probably related to the smaller test set and the higher depth of this horizon. The MLR predicted the depth of the Apb-, Ahb- and Hab-horizons with relative root mean square errors (RMSEs) of 7, 3 and 13\%, respectively, in the pseudo-3D area. MLR had a lower accuracy for the 2D transect compared to the pseudo-3D area. Overall, the use of LDA and MLR has been an efficient methodological approach for predicting buried horizon positions. Highlights The suitability of geoelectrical measurements for digital modelling of diagnostic buried soil horizons was determined. LDA and MLR were used to detect multiple horizons with geoelectrical devices and terrain attributes. Geoelectrical variables were significant predictors of the position of the target soil horizons. The use of these tested digital technologies gives an opportunity to develop high-resolution soil mapping procedures.}, language = {en} } @article{vanderMeijTemmeLinetal.2018, author = {van der Meij, Marijn W. and Temme, Arnaud J. A. M. and Lin, H. S. and Gerke, Horst H. and Sommer, Michael}, title = {On the role of hydrologic processes in soil and landscape evolution modeling}, series = {Earth science reviews : the international geological journal bridging the gap between research articles and textbooks}, volume = {185}, journal = {Earth science reviews : the international geological journal bridging the gap between research articles and textbooks}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0012-8252}, doi = {10.1016/j.earscirev.2018.09.001}, pages = {1088 -- 1106}, year = {2018}, abstract = {The ability of water to transport and transform soil materials is one of the main drivers of soil and landscape development. In turn, soil and landscape properties determine how water is distributed in soil landscapes. Understanding the complex dynamics of this co-evolution of soils, landscapes and the hydrological system is fundamental in adapting land management to changes in climate. Soil-Landscape Evolution Models (SLEMs) are used to simulate the development and evolution of soils and landscapes. However, many hydrologic processes, such as preferential flow and subsurface lateral flow, are currently absent in these models. This limits the applicability of SLEMs to improve our understanding of feedbacks in the hydro-pedo-geomorphological system. Implementation of these hydrologic processes in SLEMs faces several complications related to calculation demands, limited methods for linking pedogenic and hydrologic processes, and limited data on quantification of changes in the hydrological system over time. In this contribution, we first briefly review processes and feedbacks in soil-landscape-hydrological systems. Next, we elaborate on the development required to include these processes in SLEMs. We discuss the state-of-the-art knowledge, identify complications, give partial solutions and suggest important future development. The main requirements for incorporating hydrologic processes in SLEMs are: (1) designing a model framework that can deal with varying timescales for different sets of processes, (2) developing and implementing methods for simulating pedogenesis as a function of water flow, (3) improving and implementing knowledge on the evolution and dynamics of soil hydraulic properties over different timescales, and (4) improving the database on temporal changes and dynamics of flow paths.}, language = {en} } @article{KaczorekPuppeBusseetal.2019, author = {Kaczorek, Danuta and Puppe, Daniel and Busse, Jacqueline and Sommer, Michael}, title = {Effects of phytolith distribution and characteristics on extractable silicon fractions in soils under different vegetation - An exploratory study on loess}, series = {Geoderma : an international journal of soil science}, volume = {356}, journal = {Geoderma : an international journal of soil science}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0016-7061}, doi = {10.1016/j.geoderma.2019.113917}, pages = {16}, year = {2019}, abstract = {The significance of phytoliths for the control of silicon (Si) fluxes from terrestrial to aquatic ecosystems has been recognized as a key factor. Humankind actively influences Si fluxes by intensified land use, i.e., agriculture and forestry, on a global scale. We hypothesized phytolith distribution and assemblages in soils of agricultural and forestry sites to be controlled by vegetation (which is directed by land use) with direct effects on extractable Si fractions driven mainly by phytolith characteristics, i.e., dissolution status (dissolution signs) and morphology (morphotype proportions). To test our hypothesis we combined different chemical extraction methods (calcium chloride, ammonium oxalate, Tiron) for the quantification of different Si fractions (plant available Si, Si adsorbed to/occluded in pedogenic oxides/hydroxides, amorphous Si) and microscopic techniques (light microscopy, confocal laser scanning microscopy, scanning electron microscopy) for detailed analyses of phytoliths extracted using gravimetric separation (physical extraction) from exemplary loess soils of agricultural (arable land and grassland/meadow) and forestry (beech and pine) sites in Poland. We found differences in dissolution signs, morphotype proportions, and vertical distribution of phytoliths in soil horizons per site. In general, dominant morphotypes of assignable phytoliths in the studied soil profiles were elongate phytoliths and short cells, both of which are typical for grass-dominated vegetation. However, the organic layers of forest soils were dominated by globular phytoliths, which are typical indicators for mosses. As expected soil horizons under different vegetation generally were characterized by differences in extractable Si fractions, especially in the upper soil horizons. However, phytogenic Si pools counter-intuitively showed no correlations with chemically extracted Si fractions and soil pH at all. Our findings indicate that it is necessary to combine microscopic analyses and Si extraction techniques for examinations of Si cycling in biogeosystems, because extractions of Si fractions alone do not allow drawing any conclusions about phytolith characteristics or interactions between phytolith pools and chemically extractable Si fractions and do not necessarily reflect phytogenic Si pool quantities in soils and vice versa.}, language = {en} } @article{SteinhoefelBreuervonBlanckenburgetal.2017, author = {Steinh{\"o}fel, Grit and Breuer, J{\"o}rn and von Blanckenburg, Friedhelm and Horn, Ingo and Sommer, Michael}, title = {The dynamics of Si cycling during weathering in two small catchments in the Black Forest (Germany) traced by Si isotopes}, series = {Chemical geology : official journal of the European Association for Geochemistry}, volume = {466}, journal = {Chemical geology : official journal of the European Association for Geochemistry}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0009-2541}, doi = {10.1016/j.chemgeo.2017.06.026}, pages = {389 -- 402}, year = {2017}, abstract = {Silicon stable isotopes have emerged as a powerful proxy to investigate weathering because Si uptake from solution by secondary minerals or by the vegetation causes significant shifts in the isotope composition. In this study, we determined the Si isotope compositions of the principle Si pools within two small catchments located on sandstone and paragneiss, respectively, in the temperate Black Forest (Germany). At both settings, clay formation is dominated by mineral transformation preserving largely the signature of parental minerals with delta Si-30 values of around -0.7\%. Bulk soils rich in primary minerals are similar to bulk parental material with delta Si-30 values close to -0.4\%. Topsoils are partly different because organic matter degradation has promoted intense weathering leading to delta Si-30 values as low as -1.0\%. Water samples expose highly dynamic weathering processes in the soil zone: 1) after spring snowmelt, increased release of DOC and high water fluxes trigger clay mineral dissolution which leads to delta Si-30 values down to -0.7\% and 2) in course of the summer, Si uptake by the vegetation and secondary mineral formation drives dissolved Si to typical positive delta Si-30 values up to 1.1\%. Groundwater with delta Si-30 values of around 0.4\% records steady processes in bedrock reflecting plagioclase weathering together with kaolinite precipitation. An isotope mass balance approach reveals incongruent weathering conditions where denudation of Si is largely driven by physical erosion. Erosion of phytoliths contributes 3 to 21\% to the total Si export flux, which is in the same order as the dissolved Si flux. These results elucidate the Si dynamics during weathering on catchments underlain of sedimentary origin, prevailing on the Earth surface and provide therefore valuable information to interpret the isotope signature of large river systems.}, language = {en} } @article{HoffmannWirthBessleretal.2017, author = {Hoffmann, Mathias and Wirth, Stephan J. and Bessler, Holger and Engels, Christof and Jochheim, Hubert and Sommer, Michael and Augustin, J{\"u}rgen}, title = {Combining a root exclusion technique with continuous chamber and porous tube measurements for a pin-point separation of ecosystem respiration in croplands}, series = {Journal of plant nutrition and soil science = Zeitschrift f{\"u}r Pflanzenern{\"a}hrung und Bodenkunde}, volume = {181}, journal = {Journal of plant nutrition and soil science = Zeitschrift f{\"u}r Pflanzenern{\"a}hrung und Bodenkunde}, number = {1}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1436-8730}, doi = {10.1002/jpln.201600489}, pages = {41 -- 50}, year = {2017}, abstract = {To better assess ecosystem C budgets of croplands and understand their potential response to climate and management changes, detailed information on the mechanisms and environmental controls driving the individual C flux components are needed. This accounts in particular for the ecosystem respiration (R-eco) and its components, the autotrophic (R-a) and heterotrophic respiration (R-h) which vary tremendously in time and space. This study presents a method to separate R-eco into R-a [as the sum of R-a (shoot) and R-a (root)] and R-h in order to detect temporal and small-scale spatial dynamics within their relative contribution to overall R-eco. Thus, predominant environmental drivers and underlying mechanisms can be revealed. R-eco was derived during nighttime by automatic chamber CO2 flux measurements on plant covered plots. R-h was derived from CO2 efflux measurements, which were performed in parallel to R-eco measurements on a fallow plot using CO2 sampling tubes in 10 cm soil depth. R-a (root) was calculated as the difference between sampling tube CO2 efflux measurements on a plant covered plot and R-h. R-a (shoot) was calculated as R-eco - R-a (root) - R-h. Measurements were carried out for winter wheat (Triticum aestivum L.) during the crop season 2015 at an experimental plot located in the hummocky ground moraine landscape of NE Germany. R-eco varied seasonally from < 1 to 9.5 g C m(-2) d(-1), and was higher in adult (a) and reproductive (r) than juvenile (j) stands (gC m(-2) d(-1): j = 1.2, a = 4.6, r = 5.3). Observed R-a and R-h were in general smaller compared to the independently measured R-eco, contributing in average 58\% and 42\% to R-eco. However, both varied strongly regarding their environmental drivers and particular contribution throughout the study period, following the seasonal development of soil temperature and moisture (R-h) as well as crop development (R-a). Thus, our results consistently revealed temporal dynamics regarding the relative contribution of R-a (root) and R-a (shoot) to R-a, as well as of R-a and R-h to R-eco. Based on the observed results, implications for partitioning of R-eco in croplands are given.}, language = {en} } @article{HerbrichGerkeSommer2018, author = {Herbrich, Marcus and Gerke, Horst H. and Sommer, Michael}, title = {Root development of winter wheat in erosion-affected soils depending on the position in a hummocky ground moraine soil landscape}, series = {Journal of plant nutrition and soil science = Zeitschrift f{\"u}r Pflanzenern{\"a}hrung und Bodenkunde}, volume = {181}, journal = {Journal of plant nutrition and soil science = Zeitschrift f{\"u}r Pflanzenern{\"a}hrung und Bodenkunde}, number = {2}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1436-8730}, doi = {10.1002/jpln.201600536}, pages = {147 -- 157}, year = {2018}, abstract = {Agricultural soil landscapes of hummocky ground moraines are characterized by 3D spatial patterns of soil types that result from profile modifications due to the combined effect of water and tillage erosion. We hypothesize that crops reflect such soil landscape patterns by increased or reduced plant and root growth. Root development may depend on the thickness and vertical sequence of soil horizons as well as on the structural development state of these horizons at different landscape positions. The hypotheses were tested using field data of the root density (RD) and the root lengths (RL) of winter wheat using the minirhizotron technique. We compared data from plots at the CarboZALF-D site (NE Germany) that are representing a non-eroded reference soil profile (Albic Luvisol) at a plateau position, a strongly eroded profile at steep slope (Calcaric Regosol), and a depositional profile at the footslope (Anocolluvic Regosol). At each of these plots, three Plexiglas access tubes were installed down to approx. 1.5 m soil depth. Root measurements were carried out during the growing season of winter wheat (September 2014-August 2015) on six dates. The root length density (RLD) and the root biomass density were derived from RD values assuming a mean specific root length of 100 m g(-1). Values of RD and RLD were highest for the Anocolluvic Regosol and lowest for the Calcaric Regosol. The maximum root penetration depth was lower in the Anocolluvic Regosol because of a relatively high and fluctuating water table at this landscape position. Results revealed positive relations between below-ground (root) and above-ground crop parameters (i.e., leaf area index, plant height, biomass, and yield) for the three soil types. Observed root densities and root lengths in soils at the three landscape positions corroborated the hypothesis that the root system was reflecting erosion-induced soil profile modifications. Soil landscape position dependent root growth should be considered when attempting to quantify landscape scale water and element balances as well as agricultural productivity.}, language = {en} } @inproceedings{Sommer2006, author = {Sommer, Michael}, title = {Nicht-invasive Methoden in der Bodenlandschaftsforschung}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-7117}, year = {2006}, abstract = {Der Referent ist Leiter des Institutes f{\"u}r Bodenlandschaftsforschung am Leibniz-Zentrum f{\"u}r Agrarlandschaftsforschung (ZALF) e. V. in M{\"u}ncheberg.}, language = {de} } @misc{PuppeWannerSommer2018, author = {Puppe, Daniel and Wanner, Manfred and Sommer, Michael}, title = {Data on euglyphid testate amoeba densities, corresponding protozoic silicon pools, and selected soil parameters of initial and forested biogeosystems}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {1039}, issn = {1866-8372}, doi = {10.25932/publishup-47116}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-471160}, pages = {9}, year = {2018}, abstract = {The dataset in the present article provides information on protozoic silicon (Si) pools represented by euglyphid testate amoebae (TA) in soils of initial and forested biogeosystems. Protozoic Si pools were calculated from densities of euglyphid TA shells and corresponding Si contents. The article also includes data on potential annual biosilicification rates of euglyphid TA at the examined sites. Furthermore, data on selected soil parameters (e.g., readily-available Si, soil pH) and site characteristics (e.g., soil groups, climate data) can be found. The data might be interesting for researchers focusing on biological processes in Si cycling in general and euglyphid TA and corresponding protozoic Si pools in particular.}, language = {en} } @article{HoffmannJurischAlbaetal.2017, author = {Hoffmann, Mathias and Jurisch, Nicole and Alba, Juana Garcia and Borraz, Elisa Albiac and Schmidt, Marten and Huth, Vytas and Rogasik, Helmut and Rieckh, Helene and Verch, Gernot and Sommer, Michael and Augustin, J{\"u}rgen}, title = {Detecting small-scale spatial heterogeneity and temporal dynamics of soil organic carbon (SOC) stocks}, series = {Biogeosciences}, volume = {14}, journal = {Biogeosciences}, number = {4}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {1726-4170}, doi = {10.5194/bg-14-1003-2017}, pages = {1003 -- 1019}, year = {2017}, abstract = {Carbon (C) sequestration in soils plays a key role in the global C cycle. It is therefore crucial to adequately monitor dynamics in soil organic carbon (Delta SOC) stocks when aiming to reveal underlying processes and potential drivers. However, small-scale spatial (10-30 m) and temporal changes in SOC stocks, particularly pronounced in arable lands, are hard to assess. The main reasons for this are limitations of the well-established methods. On the one hand, repeated soil inventories, often used in long-term field trials, reveal spatial patterns and trends in Delta SOC but require a longer observation period and a sufficient number of repetitions. On the other hand, eddy covariance measurements of C fluxes towards a complete C budget of the soil-plant-atmosphere system may help to obtain temporal Delta SOC patterns but lack small-scale spatial resolution. To overcome these limitations, this study presents a reliable method to detect both short-term temporal dynamics as well as small-scale spatial differences of Delta SOC using measurements of the net ecosystem carbon balance (NECB) as a proxy. To estimate the NECB, a combination of automatic chamber (AC) measurements of CO2 exchange and empirically modeled aboveground biomass development (NPPshoot / were used. To verify our method, results were compared with Delta SOC observed by soil resampling. Soil resampling and AC measurements were performed from 2010 to 2014 at a colluvial depression located in the hummocky ground moraine landscape of northeastern Germany. The measurement site is characterized by a variable groundwater level (GWL) and pronounced small-scale spatial heterogeneity regarding SOC and nitrogen (Nt) stocks. Tendencies and magnitude of Delta SOC values derived by AC measurements and repeated soil inventories corresponded well. The period of maximum plant growth was identified as being most important for the development of spatial differences in annual Delta SOC. Hence, we were able to confirm that AC-based C budgets are able to reveal small-scale spatial differences and short-term temporal dynamics of Delta SOC.}, language = {en} } @article{HoffmannSchulzHankeAlbaetal.2017, author = {Hoffmann, Mathias and Schulz-Hanke, Maximilian and Alba, Juana Garcia and Jurisch, Nicole and Hagemann, Ulrike and Sachs, Torsten and Sommer, Michael and Augustin, J{\"u}rgen}, title = {A simple calculation algorithm to separate high-resolution CH4 flux measurements into ebullition- and diffusion-derived components}, series = {Atmospheric measurement techniques : an interactive open access journal of the European Geosciences Union}, volume = {10}, journal = {Atmospheric measurement techniques : an interactive open access journal of the European Geosciences Union}, number = {1}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {1867-1381}, doi = {10.5194/amt-10-109-2017}, pages = {109 -- 118}, year = {2017}, abstract = {Processes driving the production, transformation and transport of methane (CH4 / in wetland ecosystems are highly complex. We present a simple calculation algorithm to separate open-water CH4 fluxes measured with automatic chambers into diffusion-and ebullition-derived components. This helps to reveal underlying dynamics, to identify potential environmental drivers and, thus, to calculate reliable CH4 emission estimates. The flux separation is based on identification of ebullition-related sudden concentration changes during single measurements. Therefore, a variable ebullition filter is applied, using the lower and upper quartile and the interquartile range (IQR). Automation of data processing is achieved by using an established R script, adjusted for the purpose of CH4 flux calculation. The algorithm was validated by performing a laboratory experiment and tested using flux measurement data (July to September 2013) from a former fen grassland site, which converted into a shallow lake as a result of rewetting. Ebullition and diffusion contributed equally (46 and 55 \%) to total CH4 emissions, which is comparable to ratios given in the literature. Moreover, the separation algorithm revealed a concealed shift in the diurnal trend of diffusive fluxes throughout the measurement period. The water temperature gradient was identified as one of the major drivers of diffusive CH4 emissions, whereas no significant driver was found in the case of erratic CH4 ebullition events.}, language = {en} } @article{FilipovicGerkeFilipovicetal.2018, author = {Filipovic, Vilim and Gerke, Horst H. and Filipovic, Lana and Sommer, Michael}, title = {Quantifying subsurface lateral flow along sloping horizon boundaries in soil profiles of a hummocky ground moraine}, series = {Vadose zone journal}, volume = {17}, journal = {Vadose zone journal}, number = {1}, publisher = {Soil Science Society of America}, address = {Madison}, issn = {1539-1663}, doi = {10.2136/vzj2017.05.0106}, pages = {12}, year = {2018}, abstract = {Subsurface lateral flow in hillslope soils depends on lower permeability or texture-contrasting soil horizons. In the arable hummocky soil landscape, erosion processes caused glacial till appearance closer to the soil surface at upslope positions. The objective of this work was to quantify the potential for subsurface lateral flow depending on the erosion-affected spatial hydropedological complexity. The eroded Haplic Luvisol profile was studied due to the presence of a relatively dense C horizon that varied in depth, thickness, and sloping angle. A two-dimensional numerical modeling and sensitivity analysis for the saturated hydraulic conductivity (K-s) of the C horizon and the depth to C horizon (i.e., soil solum thickness) was performed for rainstorms in 2011 and 2012 using HYDRUS-2D. A K-s value of <2.5 cm d(-1) for the C horizon was required for lateral flow initiation. Lateral flow was (i) increasing with decreasing solum thickness, indicating an erosion-induced feedback on subsurface lateral flow, and (ii) dependent on the soil moisture regime prior to rainstorms. The effect of lateral flow on the movement of a conservative tracer was simulated in the form of a "virtual experiment". Simulation scenarios revealed only a relatively small lateral shift of the tracer plume caused by a local decoupling of water (already lateral) from subsequent tracer movement (still vertical). Longer term simulations suggested that, for the present conditions, lateral flow was limited mostly to occasional summer storm events. Even without considering preferential flow contribution to lateral flow, highly complex hydropedologic interactions are present in erosion-affected heterogeneous soil profiles.}, language = {en} } @article{vanderMeijReimannVornehmetal.2019, author = {van der Meij, Marijn W. and Reimann, Tony and Vornehm, V. K. and Temme, Arnaud J. A. M. and Wallinga, Jakob and van Beek, Roy and Sommer, Michael}, title = {Reconstructing rates and patterns of colluvial soil redistribution in agrarian (hummocky) landscapes}, series = {Earth surface processes and landforms : the journal of the British Geomorphological Research Group}, volume = {44}, journal = {Earth surface processes and landforms : the journal of the British Geomorphological Research Group}, number = {12}, publisher = {Wiley}, address = {Hoboken}, issn = {0197-9337}, doi = {10.1002/esp.4671}, pages = {2408 -- 2422}, year = {2019}, abstract = {Humans have triggered or accelerated erosion processes since prehistoric times through agricultural practices. Optically stimulated luminescence (OSL) is widely used to quantify phases and rates of the corresponding landscape change, by measuring the last moment of daylight exposure of sediments. However, natural and anthropogenic mixing processes, such as bioturbation and tillage, complicate the use of OSL as grains of different depositional ages become mixed, and grains become exposed to light even long after the depositional event of interest. Instead, OSL determines the stabilization age, indicating when sediments were buried below the active mixing zone. These stabilization ages can cause systematic underestimation when calculating deposition rates. Our focus is on colluvial deposition in a kettle hole in the Uckermark region, northeastern Germany. We took 32 samples from five locations in the colluvium filling the kettle hole to study both spatial and temporal patterns in colluviation. We combined OSL dating with advanced age modelling to determine the stabilization age of colluvial sediments. These ages were combined with an archaeological reconstruction of historical ploughing depths to derive the levels of the soil surface at the moment of stabilization; the deposition depths, which were then used to calculate unbiased deposition rates. We identified two phases of colluvial deposition. The oldest deposits (similar to 5 ka) were located at the fringe of the kettle hole and accumulated relatively slowly, whereas the youngest deposits (<0.3 ka) rapidly filled the central kettle hole with rates of two orders of magnitude higher. We suggest that the latter phase is related to artificial drainage, facilitating accessibility in the central depression for agricultural practices. Our results show the need for numerical dating techniques that take archaeological and soil-geomorphological information into account to identify spatiotemporal patterns of landscape change, and to correctly interpret landscape dynamics in anthropogenically influenced hilly landscapes. (c) 2019 The Authors. Earth Surface Processes and Landforms Published by John Wiley \& Sons Ltd.}, language = {en} } @article{PuppeWannerSommer2018, author = {Puppe, Daniel and Wanner, Manfred and Sommer, Michael}, title = {Data on euglyphid testate amoeba densities, corresponding protozoic silicon pools, and selected soil parameters of initial and forested biogeosystems}, series = {Data in brief}, volume = {21}, journal = {Data in brief}, publisher = {Elsevier}, address = {Amsterdam}, issn = {2352-3409}, doi = {10.1016/j.dib.2018.10.164}, pages = {1697 -- 1703}, year = {2018}, abstract = {The dataset in the present article provides information on protozoic silicon (Si) pools represented by euglyphid testate amoebae (TA) in soils of initial and forested biogeosystems. Protozoic Si pools were calculated from densities of euglyphid TA shells and corresponding Si contents. The article also includes data on potential annual biosilicification rates of euglyphid TA at the examined sites. Furthermore, data on selected soil parameters (e.g., readily-available Si, soil pH) and site characteristics (e.g., soil groups, climate data) can be found. The data might be interesting for researchers focusing on biological processes in Si cycling in general and euglyphid TA and corresponding protozoic Si pools in particular.}, language = {en} } @article{LeueHoffmannHieroldetal.2019, author = {Leue, Martin and Hoffmann, Carsten and Hierold, Wilfried and Sommer, Michael}, title = {In-situ multi-sensor characterization of soil cores along an erosion deposition gradient}, series = {Catena : an interdisciplinary journal of soil science, hydrology, geomorphology focusing on geoecology and landscape evolution}, volume = {182}, journal = {Catena : an interdisciplinary journal of soil science, hydrology, geomorphology focusing on geoecology and landscape evolution}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0341-8162}, doi = {10.1016/j.catena.2019.104140}, pages = {11}, year = {2019}, abstract = {Soil landscape research is faced with wide-ranging questions of soil erosion, precision farming, and agricultural risk management. Digital Soil Morphometrics is a powerful tool to provide respective answers or recommendations but requires soil data from the pedon-to-field scale with high horizontal and vertical resolutions, including the subsoil. We present an efficient sampling and measurement method for easily obtainable soil driving cores with low-destructive preparation. Elemental contents and soil organic and mineral matter composition were measured rapidly and in large numbers using a multi-sensor approach, i.e., visible and near infrared (Vis-NIR), diffuse reflectance infrared Fourier transform (DRIFT), and X-ray fluorescence (XRF) spectroscopy. The suitability of the approach with respect to three-dimensional soil landscape models was tested using soils along a slope representing different stages of erosion and deposition in a hummocky landscape under arable land use (Calcaric Regosols, Calcic Luvisols, Luvic Stagnosols, Gleyic-Colluvic Regosols). The combination of soil core sampling, pedological description, and three spectroscopic techniques enabled rapid determination and interpretation of horizontal and vertical spatial distributions of soil organic carbon (SOC), soil organic and mineral matter composition, as well as CaCO3, Fe, and Mn contents. Depth profiles for SOC, CaCO3, and Fe contents were suitable indicators for site-specific degrees of erosion and matter transport processes at the pedon-to-field scale. Fe and Mn profiles helped identifying zones of reductive and oxic domains in subsoils (gleyzation). Further methodical developments should implement plant-availability of nutrients, characterization of Fe oxides, and calibration of the spectroscopic techniques to field-moist samples.}, language = {en} } @misc{PuppeSommer2018, author = {Puppe, Daniel and Sommer, Michael}, title = {Experiments, uptake mechanisms, and functioning of silicon foliar fertilization}, series = {Advances in Agronomy ; 152}, volume = {152}, journal = {Advances in Agronomy ; 152}, publisher = {Elsevier}, address = {San Diego}, isbn = {978-0-12-815171-6}, issn = {0065-2113}, doi = {10.1016/bs.agron.2018.07.003}, pages = {1 -- 49}, year = {2018}, abstract = {Silicon (Si) is considered as a quasiessential element for higher plants as its uptake increases plant growth and resistance against abiotic as well as biotic stresses. Foliar application of fertilizers generally is assumed to be a comparably environment-friendly form of fertilization because only small quantities are needed. The interest in foliar fertilization and the use of Si as a fertilizer in general increased significantly within the last decades, but there are only few publications dealing with the foliar application of Si at all. In the present review, the effects of Si foliar fertilization, including nano-Si fertilizers, on the three most important crops on a global scale, that is, maize, rice, and wheat, are summarized. Additionally, different pathways (i.e., cuticular pathways, stomata, and trichomes) of foliar uptake and functioning of Si foliar fertilizers against biotic (i.e., fungal diseases and harmful insects), as well as abiotic (i.e., water stress, macronutrient imbalance, and heavy metal toxicity) stressors are discussed. Future research should especially focus on (1) the gathering of empirical data from field and greenhouse experiments, (2) the intensification of co-operations between practitioners and scientists, (3) interdisciplinary research, and (4) the analysis of results from multiple studies (meta-analysis, big data) to fully understand effects, uptake, and functioning of Si foliar fertilizers and to evaluate their potential in modern sustainable agriculture concepts.}, language = {en} } @article{HoffmannPohlJurischetal.2017, author = {Hoffmann, Matthias and Pohl, Madlen and Jurisch, N. and Prescher, Anne-Katrin and Campa, E. Mendez and Hagemann, Ulrike and Remus, R. and Verch, G. and Sommer, Michael and Augustin, J.}, title = {Maize carbon dynamics are driven by soil erosion state and plant phenology rather than nitrogen fertilization form}, series = {Soil \& tillage research : an international journal on research and development in soil tillage and field traffic, and their relationships with soil environment, land use and crop production}, volume = {175}, journal = {Soil \& tillage research : an international journal on research and development in soil tillage and field traffic, and their relationships with soil environment, land use and crop production}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0167-1987}, doi = {10.1016/j.still.2017.09.004}, pages = {255 -- 266}, year = {2017}, abstract = {Carbon (C) stored in soils represents the largest C pool of terrestrial ecosystems and consequently plays a crucial role in the global C cycle. So far, it is widely unclear to what extent different land uses and land use change influence soil C storage. The hummocky ground moraine landscape of northeastern Germany is characterized by distinct small-scale soil heterogeneity on the one hand, and intensive energy crop cultivation on the other. Both factors are assumed to significantly influence gaseous C exchange; as such, they likely drive soil organic carbon (SOC) stock dynamics in terrestrial agricultural ecosystems. To date, it is not clear to what extent N fertilization forms, which are associated with energy crop cultivation (e.g., application of biogas fermentation residues) and soil type relative to soil erosion state, influence soil C dynamics, nor is it clear whether one of these factors is more important than the other. To investigate the influence of soil erosion state and N fertilization form on soil C dynamics, we present dynamic and seasonal net ecosystem carbon balances (NECB) as a proxy for changes in soil organic carbon stocks. Measurements were conducted for maize (Zea mays L.) at five sites in the "CarboZALF-D" experimental field during the 2011 growing season. Measurement sites represent different soil erosion states (non-eroded Albic Luvisols, extremely eroded Calcaric Regosols and depositional Endogleyic Colluvic Regosols) and N fertilization forms (100\% mineral fertilizer, 50\% mineral and 50\% organic fertilizer, and 100\% organic fertilizer). Fertilization treatments were established on the Albic Luvisol. Net ecosystem CO2 exchange (NEE) and ecosystem respiration (R-eco) were measured every four weeks using a dynamic flow-through non-steady-state closed manual chamber system. Gap filling was performed based on empirical temperature and PAR dependency functions and was used to derive daily NEE values. In parallel, daily above-ground biomass production (NPFshoot) was estimated using a logistic growth equation, fitted on periodic biomass samples. Finally, C dynamics were calculated as the balance of daily NEE and NPPshoot based on the initial C input due to organic fertilization. Resulting NECB varied from pronounced soil C losses at the Endogleyic Colluvic Regosol (592 g C m(-2)) to soil C gains at the Calcaric Regosol (-124 g C m(-2)). Minor to modest C losses were observed for the Albic Luvisol. Compared to N fertilization forms, soil erosion states generally had a stronger impact on derived NECB. However, interannual variations in plant phonology and interactions between soil erosion states and fertilization forms might result in different NECB values over multiple years. Hence, long-term measurements of different fertilization treatments on characteristic soil landscape elements are needed.}, language = {en} } @article{FrickSchuesslerSommeretal.2018, author = {Frick, Daniel Alexander and Sch{\"u}ßler, Jan Arne and Sommer, Michael and von Blanckenburg, Friedhelm}, title = {Laser Ablation In Situ Silicon Stable Isotope Analysis of Phytoliths}, series = {Geostandards and geoanalytical research}, volume = {43}, journal = {Geostandards and geoanalytical research}, number = {1}, publisher = {Wiley}, address = {Hoboken}, issn = {1639-4488}, doi = {10.1111/ggr.12243}, pages = {77 -- 91}, year = {2018}, abstract = {Silicon is a beneficial element for many plants and is deposited in plant tissue as amorphous bio-opal called phytoliths. The biochemical processes of silicon uptake and precipitation induce isotope fractionation: the mass-dependent shift in the relative abundances of the stable isotopes of silicon. At the bulk scale, delta Si-30 ratios span from -2 to +6 parts per thousand. To further constrain these variations in situ, at the scale of individual phytolith fragments, we used femtosecond laser ablation multi-collector inductively coupled plasma-mass spectrometry (fsLA-MC-ICP-MS). A variety of phytoliths from grasses, trees and ferns were prepared from plant tissue or extracted from soil. Good agreement between phytolith delta Si-30 ratios obtained by bulk solution MC-ICP-MS analysis and in situ isotope ratios from fsLA-MC-ICP-MS validates the method. Bulk solution analyses result in at least twofold better precision for delta Si-30 (2s on reference materials <= 0.11 parts per thousand) over that found for the means of in situ analyses (2s typically <= 0.24 parts per thousand). We find that bushgrass, common reed and horsetail show large internal variations up to 2 parts per thousand in delta Si-30, reflecting the various pathways of silicon from soil to deposition. Femtosecond laser ablation provides a means to identify the underlying processes involved in the formation of phytoliths using silicon isotope ratios.}, language = {en} } @article{WilkenBaurSommeretal.2018, author = {Wilken, Florian and Baur, Martin and Sommer, Michael and Deumlich, Detlef and Bens, Oliver and Fiener, Peter}, title = {Uncertainties in rainfall kinetic energy-intensity relations for soil erosion modelling}, series = {Catena : an interdisciplinary journal of soil science, hydrology, geomorphology focusing on geoecology and landscape evolution}, volume = {171}, journal = {Catena : an interdisciplinary journal of soil science, hydrology, geomorphology focusing on geoecology and landscape evolution}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0341-8162}, doi = {10.1016/j.catena.2018.07.002}, pages = {234 -- 244}, year = {2018}, abstract = {For bare soil conditions, the most important process driving and initiating splash and interrill erosion is the detachment of soil particles via raindrop impact. The kinetic energy of a rainfall event is controlled by the drop size and fall velocity distribution, which is often directly or indirectly implemented in erosion models. Therefore, numerous theoretical functions have been developed for the estimation of rainfall kinetic energy from available rainfall intensity measurements. The aim of this study is to assess differences inherent in a wide number of kinetic energy-rainfall intensity (KE-I) relations and their role in soil erosion modelling. Therefore, 32 KE-I relations are compared against measured rainfall energies based on optical distrometer measurements carried out at five stations of two substantially different rainfall regimes. These allow for continuous high-resolution (1-min) direct measurements of rainfall kinetic energies from a detailed spectrum of measured drop sizes and corresponding fall velocities. To quantify the effect of different KE-I relations on sediment delivery, we apply the erosion model WATEM/SEDEM in an experimental setup to four catchments of NE-Germany. The distrometer data shows substantial differences between measured and theoretical models of drop size and fall velocity distributions. For low intensities the number of small drops is overestimated by the Marshall and Palmer (1948; MP) drop size distribution, while for high intensities the proportion of large drops is overestimated by the MP distribution. The distrometer measurements show a considerable proportion of large drops falling at slower velocities than predicted by the Gunn and Kinzer (1949) terminal velocity model. For almost all rainfall events at all stations, the KE-I relations predicted higher cumulative kinetic energy sums compared to the direct measurements of the optical distrometers. The different KE-I relations show individual characteristics over the course of rainfall intensity levels. Our results indicate a high sensitivity (up to a range from 10 to 27 t ha(-1)) of the simulated sediment delivery related to different KE-I relations. Hence, the uncertainty associated with KE-I relations for soil erosion modelling is of critical importance.}, language = {en} } @article{WebberLischeidSommeretal.2020, author = {Webber, Heidi and Lischeid, Gunnar and Sommer, Michael and Finger, Robert and Nendel, Claas and Gaiser, Thomas and Ewert, Frank}, title = {No perfect storm for crop yield failure in Germany}, series = {Environmental research letters}, volume = {15}, journal = {Environmental research letters}, number = {10}, publisher = {IOP Publ. Ltd.}, address = {Bristol}, issn = {1748-9326}, doi = {10.1088/1748-9326/aba2a4}, pages = {14}, year = {2020}, abstract = {Large-scale crop yield failures are increasingly associated with food price spikes and food insecurity and are a large source of income risk for farmers. While the evidence linking extreme weather to yield failures is clear, consensus on the broader set of weather drivers and conditions responsible for recent yield failures is lacking. We investigate this for the case of four major crops in Germany over the past 20 years using a combination of machine learning and process-based modelling. Our results confirm that years associated with widespread yield failures across crops were generally associated with severe drought, such as in 2018 and to a lesser extent 2003. However, for years with more localized yield failures and large differences in spatial patterns of yield failures between crops, no single driver or combination of drivers was identified. Relatively large residuals of unexplained variation likely indicate the importance of non-weather related factors, such as management (pest, weed and nutrient management and possible interactions with weather) explaining yield failures. Models to inform adaptation planning at farm, market or policy levels are here suggested to require consideration of cumulative resource capture and use, as well as effects of extreme events, the latter largely missing in process-based models. However, increasingly novel combinations of weather events under climate change may limit the extent to which data driven methods can replace process-based models in risk assessments.}, language = {en} } @article{SommerKaczorekKuzyakovetal.2006, author = {Sommer, Michael and Kaczorek, Danuta and Kuzyakov, Yakov and Breuer, J{\"o}rn}, title = {Silicon pools and fluxes in soils and landscapes : a review}, year = {2006}, abstract = {Silicon (Si) is the second-most abundant element in the earth's crust. In the pedosphere, however, huge spans of Si contents occur mainly caused by Si redistribution in soil profiles and landscapes. Here, we summarize the current knowledge on the different pools and fluxes of Si in soils and terrestrial biogeosystems. Weathering and subsequent release of soluble Si may lead to (1) secondarily bound Si in newly formed Al silicates, (2) amorphous silica precipitation on surfaces of other minerals, (3) plant uptake, formation of phytogenic Si, and subsequent retranslocation to soils, (4) translocation within soil profiles and formation of new horizons, or (5) translocation out of soils (desilication). The research carried out hitherto focused on the participation of Si in weathering processes, especially in clay neoformation, buffering mechanisms for acids in soils or chemical denudation of landscapes. There are, however, only few investigations on the characteristics and controls of the low-crystalline, almost pure silica compounds formed during pedogenesis. Further, there is strong demand to improve the knowledge of (micro)biological and rhizosphere processes contributing to Si mobilization, plant uptake, and formation of phytogenic Si in plants, and release due to microbial decomposition. The contribution of the biogenic Si sources to Si redistribution within soil profiles and desilication remains unknown concerning the pools, rates, processes, and driving forces. Comprehensive studies considering soil hydrological, chemical, and biological processes as well as their interactions at the scale of pedons and landscapes are necessary to make up and model the Si balance and to couple terrestrial processes with Si cycle of limnic, fluvial, or marine biogeosystems}, language = {en} } @article{KuehnBrenningWehrhanetal.2009, author = {K{\"u}hn, J{\"u}rgen and Brenning, Alexander and Wehrhan, Marc and Koszinski, Sylvia and Sommer, Michael}, title = {Interpretation of electrical conductivity patterns by soil properties and geological maps for precision agriculture}, issn = {1385-2256}, doi = {10.1007/s11119-008-9103-z}, year = {2009}, abstract = {Precision farming needs management rules to apply spatially differentiated treatments in agricultural fields. Digital soil mapping (DSM) tools, for example apparent soil electrical conductivity, corrected to 25A degrees C (EC25), and digital elevation models, try to explain the spatial variation in soil type, soil properties (e.g. clay content), site and crop that are determined by landscape characteristics such as terrain, geology and geomorphology. We examined the use of EC25 maps to delineate management zones, and identified the main factors affecting the spatial pattern of EC25 at the regional scale in a study area in eastern Germany. Data of different types were compared: EC25 maps for 11 fields, soil properties measured in the laboratory, terrain attributes, geological maps and the description of 75 soil profiles. We identified the factors that influence EC25 in the presence of spatial autocorrelation and field-specific random effects with spatial linear mixed-effects models. The variation in EC25 could be explained to a large degree (R (2) of up to 61\%). Primarily, soil organic matter and CaCO3, and secondarily clay and the presence of gleyic horizons were significantly related to EC25. Terrain attributes, however, had no significant effect on EC25. The geological map unit showed a significant relationship to EC25, and it was possible to determine the most important soil properties affecting EC25 by interpreting the geological maps. Including information on geology in precision agriculture could improve understanding of EC25 maps. The EC25 maps of fields should not be assumed to represent a map of clay content to form a basis for deriving management zones because other factors appeared to have a more important effect on EC25.}, language = {en} } @article{GerkeKoszinskiKalettkaetal.2010, author = {Gerke, Horst H. and Koszinski, Sylvia and Kalettka, Thomas and Sommer, Michael}, title = {Structures and hydrologic function of soil landscapes with kettle holes using an integrated hydropedological approach}, issn = {0022-1694}, doi = {10.1016/j.jhydrol.2009.12.047}, year = {2010}, abstract = {The hummocky post-glacial soil landscapes with kettle holes as internal drainage systems are characterized by ponds that trap lateral fluxes in topographic depressions. A quantitative description is mostly limited by the unknown complexity of hydraulically relevant soil and sediment structures. This paper is focussing on a structure-based approach to identify relevant field-scale flow and transport processes. Illustrative examples demonstrate extreme variations in water table fluctuation for adjoining kettle holes. Explanations require a pedohydrologic concept of the arable soil landscape. Identification of structures is based on geophysical methods and soil hydraulic measurements. Electrical resistivity imaging yields 0.5 m-scale spatial structures that correspond with soil texture distributions. Electromagnetic induction provides larger-scale field maps that reflect major soil and sediment features. Results of both methods correspond within the limits of the different spatial resolutions. With geophysical exploration methods, colluvial areas with textural differences between upper and deeper soil layers, coarse-textured sediment lenses, and stony colluvial regions around kettle holes are identified as potentially relevant flow structures. The colluvial fringe around the pond seems to be a sensitive area with important lateral exchange fluxes. Tensiometer measurements perpendicular to this boundary indicate hydraulic gradients directed from the pond towards the partially saturated soil. The localized infiltration of trapped water in kettle holes can control large fractions of ground water recharge and may have implications for the fate of agricultural chemicals in post-glacial landscapes. While surface and subsurface hydraulic structures may be inferred using minimal-invasive techniques, better understanding of processes and properties governing lateral exchange fluxes between pond and surrounding soil are required.}, language = {en} } @article{KaczorekBruemmerSommer2009, author = {Kaczorek, Danuta and Bruemmer, Gerhard W. and Sommer, Michael}, title = {Content and binding forms of heavy metals, aluminium and phosphorus in bog iron ores from Poland}, issn = {0047-2425}, doi = {10.2134/Jeq2008.0125}, year = {2009}, abstract = {Bog iron ores are widespread in Polish wetland soils used as meadows or pastures. They are suspected to contain high concentrations of heavy metals, which are precipitated together with Fe along a redox gradient. Therefore, soils with bog iron ore might be important sources for a heavy metal transfer from meadow plants into the food chain. However, this transfer depends on the different binding forms of heavy metals. The binding forms were quantified by sequential extraction analysis of heavy metals (Fe, Mn, Cr, Co, Ni, Cd, Pb) as well as Al and P on 13 representative samples of bog iron ores from central and southwestern Poland. Our results showed total contents of Cr, Co, Ni, Zn, Cd, and Pb not to exceed the natural values for sandy soils from Poland. Only the total Mn was slightly higher. The highest contents of all heavy metals have,been obtained in iron oxide fractions V (occluded in noncrystalline and poorly crystalline Fe oxides) and VI (occluded in crystalline Fe oxides). The results show a distinct relationship between the content of Fe and the quantity of Zn and Pb as well R Water soluble as well as plant available fractions were below the detection limit in most cases. From this we concluded bog iron ores not to be an actual, important source of heavy metals in the food chain. However, a remobilization of heavy metals might occur due to any reduction of iron oxides in bog iron ores, for example, by rising groundwater levels.}, language = {en} } @article{KaiserEllerbrockSommer2009, author = {Kaiser, Michael and Ellerbrock, Ruth H. and Sommer, Michael}, title = {Separation of coarse organic particles from bulk surface soil samples by electrostatic attraction}, issn = {0361-5995}, doi = {10.2136/sssaj2009.0046}, year = {2009}, abstract = {Different separation procedures are suggested for studying the stability and functionality of sod organic matter (OM). Density fractionation procedures using high-molarity, water-based salt solutions to separate organic particles may cause losses or transfers of C between particle and soluble OM fractions during separation, which may be a result of solution processes. The objective of this study was to separate coarse organic particles (>0.315 mm) from air- dried surface soil samples to avoid such solution processes as far as possible. Air-dried surface soil samples (<2 mm) from nine adjacent arable and forest sites were sieved into five soil particle size fractions (2-1.25, 1.25-0.8, 0.8- 0.5, 0.5-0.4, and 0.4-0.315 mm). Coarse organic particles were separated from each of these fractions using electrostatic attraction by a charged glass surface. The sum of the total dry matter content of the electrostatically separated coarse organic particles ranged from 0.05 to 140 g kg(-1). Scanning electron microscopy images and organic C (OC) analyses indicated, however, that the coarse organic particle fractions were also composed of 20 to 76\% mineral particles (i.e., 200-760 g mineral kg(-1) fraction). The repeatability of the electrostatic attraction procedure falls within a range similar to that of accepted density fractionation methods using high-molarity salt solutions. Based on the similarity in repeatability, we suggest that the electrostatic attraction procedure will successfully remove coarse organic particles (>0.315 mm) from air-dried surface soil samples. Because aqueous solutions are not used, the electrostatic attraction procedure to separate coarse organic particles avoids C losses and transfers associated with solution-dependent techniques. Therefore, this method can be used as a pretreatment for subsequent density- or solubility-based soil OM fractionation procedures.}, language = {en} } @article{KoszinskiGerkeHieroldetal.2013, author = {Koszinski, Sylvia and Gerke, Horst H. and Hierold, Wilfried and Sommer, Michael}, title = {Geophysical-based modeling of a kettle hole catchment of the morainic soil landscape}, series = {Vadose zone journal}, volume = {12}, journal = {Vadose zone journal}, number = {4}, publisher = {Soil Science Society of America}, address = {Madison}, issn = {1539-1663}, doi = {10.2136/vzj2013.02.0044}, pages = {18}, year = {2013}, abstract = {Soilscapes of the post-glacial morainic regions of the youngest glaciation are characterized by small hydrological kettle hole catchments forming hummocky soil landscapes. The spatial heterogeneity of subsurface structures as well as erosion-controlled pedogenesis under arable land use may complicate hydrological modeling. Our aim was to generate a soil landscape model for a small representative kettle hole catchment based on geoelectrical exploration and soil profile information. For a 1-ha catchment located in the northeastern German lowlands near the town of Prenzlau, electrical resistivity transects were determined by a multi electrode system (IMPETUS 12 Fs) and electrical conductivity (ECa) was mapped by using the electromagnetic induction (EMI) device EM38DD in both the vertical and horizontal modes. The 1-m digital elevation model (DEM) was obtained by kriging from high resolution manual elevation data determined with a leveling device (ZEISS Ni 40). Soil profile data from 26 boreholes distributed radially around the central pond were used to identify boundaries between soil horizons. The soil is characterized by varying topography and morphology of diagnostic horizons such as M- (colluvium), Bt- (clay illuviation), and C- (parent glacial till). By EMI mapping we identified (i) the boundary between erosive and colluvial areas around the kettle hole, and modeled (ii) the subsurface morphology of loamy horizons. Electrical resistivity tomography results coincide with these findings and allow for distinguishing between sandy and loamy dominated areas both in vertical and horizontal direction, respectively. This soil model of soil textural properties could be used for hydrological modeling.}, language = {en} } @article{GockeLiangSommeretal.2013, author = {Gocke, Martina and Liang, Wu and Sommer, Michael and Kuzyakov, Yakov}, title = {Silicon uptake by wheat - effects of Si pools and pH}, series = {Journal of plant nutrition and soil science = Zeitschrift f{\"u}r Pflanzenern{\"a}hrung und Bodenkunde}, volume = {176}, journal = {Journal of plant nutrition and soil science = Zeitschrift f{\"u}r Pflanzenern{\"a}hrung und Bodenkunde}, number = {4}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1436-8730}, doi = {10.1002/jpln.201200098}, pages = {551 -- 560}, year = {2013}, abstract = {Silicon (Si), although not considered essential, has beneficial effects on plant growth which are mostly associated with the ability to accumulate amorphous (phytogenic) Si, e.g., as phytoliths. Phytogenic Si is the most active Si pool in the soil-plant system because of its great surface-to-volume ratio, amorphous structure, and high water solubility. Despite the high abundance of Si in terrestrial biogeosystems and its importance, e.g., for the global C cycle, little is known about Si fluxes between soil and plants and Si pools used by plants. This study aims at elucidating the contribution of various soil Si pools to Si uptake by wheat. As pH affects dissolution of Si pools and Si uptake by plants, the effect of pH (4.5 and 7) was evaluated. Wheat was grown on Si-free pellets mixed with one of the following Si pools: quartz sand (crystalline), anorthite powder (crystalline), or silica gel (amorphous). Silicon content was measured in aboveground biomass, roots, and soil solution 4 times in intervals of 7 d. At pH 4.5, plants grew best on anorthite, but pH did not significantly affect Si-uptake rates. Total Si contents in plant biomass were significantly higher in the silica-gel treatment compared to all other treatments, with up to 26 mg g(-1) in aboveground biomass and up to 17 mg g(-1) in roots. Thus, Si uptake depends on the conversion of Si into plant-available silicic acid. This conversion occurs too slowly for crystalline Si phases, therefore Si uptake from treatments with quartz sand and anorthite did not differ from the control. For plants grown on silica gel, real Si-uptake rates were higher than the theoretical value calculated based on water transpiration. This implies that Si uptake by wheat is driven not only by passive water flux but also by active transporters, depending on Si concentration in the aqueous phase, thus on type of Si pool. These results show that Si uptake by plants as well as plant growth are significantly affected by the type of Si pool and factors controlling its solubility.}, language = {en} } @article{KaiserWehrhanWerneretal.2012, author = {Kaiser, Thomas and Wehrhan, Marc and Werner, Armin and Sommer, Michael}, title = {Regionalizing ecological moisture levels and groundwater levels in grassland areas using thermal remote sensing}, series = {Grassland science}, volume = {58}, journal = {Grassland science}, number = {1}, publisher = {Wiley-Blackwell}, address = {Malden}, issn = {1744-6961}, doi = {10.1111/j.1744-697X.2011.00240.x}, pages = {42 -- 52}, year = {2012}, abstract = {Site-specific soil moisture and groundwater levels are key input parameters for ecological modeling. Obtaining such information in a comprehensive manner is difficult for large regions. We studied a floodplain region in the Federal State of Brandenburg, Germany, to examine the degree to which the average depth of groundwater tables can be derived from surface temperatures obtained by the ASTER radiospectrometer (spatial resolution of 90 m per pixel). A floristic ecological indicator representing the site-specific moisture level was applied to develop a proxy between the thermal satellite data and groundwater table depth. The use of spring scenes (late April to early May) from 2 years proved to be well suited for minimizing the effects of weather and land use. Vegetation surveys along transects that were 2 m wide across the pixel diagonals allowed for the calculation of average ecological moisture values of pixel-sites by applying Ellenberg-numbers. These values were used to calibrate the satellite data locally. There was a close relationship between surface temperature and the average ecological moisture value (R2 = 0.73). Average ecological moisture values were highly indicative of the average groundwater levels during a 7-year measurement series (R2 = 0.93). Satellite-supported thermal data from spring were suitable for estimating the average groundwater levels of low-lying grasslands on a larger scale. Ecological moisture values from the transect surveys effectively allowed the incorporation of relief heterogeneity within the thermal grid and the establishment of the correlation between thermal data and average groundwater table depth. Regression functions were used to produce a map of groundwater levels at the study site.}, language = {en} } @article{BellJonesSmithetal.2012, author = {Bell, M. J. and Jones, E. and Smith, J. and Smith, P. and Yeluripati, J. and Augustin, J{\"u}rgen and Juszczak, R. and Olejnik, J. and Sommer, Michael}, title = {Simulation of soil nitrogen, nitrous oxide emissions and mitigation scenarios at 3 European cropland sites using the ECOSSE model}, series = {Nutrient cycling in agroecosystems}, volume = {92}, journal = {Nutrient cycling in agroecosystems}, number = {2}, publisher = {Springer}, address = {Dordrecht}, issn = {1385-1314}, doi = {10.1007/s10705-011-9479-4}, pages = {161 -- 181}, year = {2012}, abstract = {The global warming potential of nitrous oxide (N2O) and its long atmospheric lifetime mean its presence in the atmosphere is of major concern, and that methods are required to measure and reduce emissions. Large spatial and temporal variations means, however, that simple extrapolation of measured data is inappropriate, and that other methods of quantification are required. Although process-based models have been developed to simulate these emissions, they often require a large amount of input data that is not available at a regional scale, making regional and global emission estimates difficult to achieve. The spatial extent of organic soils means that quantification of emissions from these soil types is also required, but will not be achievable using a process-based model that has not been developed to simulate soil water contents above field capacity or organic soils. The ECOSSE model was developed to overcome these limitations, and with a requirement for only input data that is readily available at a regional scale, it can be used to quantify regional emissions and directly inform land-use change decisions. ECOSSE includes the major processes of nitrogen (N) turnover, with material being exchanged between pools of SOM at rates modified by temperature, soil moisture, soil pH and crop cover. Evaluation of its performance at site-scale is presented to demonstrate its ability to adequately simulate soil N contents and N2O emissions from cropland soils in Europe. Mitigation scenarios and sensitivity analyses are also presented to demonstrate how ECOSSE can be used to estimate the impact of future climate and land-use change on N2O emissions.}, language = {en} } @article{SteinhoefelBreuervonBlanckenburgetal.2011, author = {Steinhoefel, Grit and Breuer, J{\"o}rn and von Blanckenburg, Friedhelm and Horn, Ingo and Kaczorek, Danuta and Sommer, Michael}, title = {Micrometer silicon isotope diagnostics of soils by UV femtosecond laser ablation}, series = {Chemical geology : official journal of the European Association for Geochemistry}, volume = {286}, journal = {Chemical geology : official journal of the European Association for Geochemistry}, number = {3-4}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0009-2541}, doi = {10.1016/j.chemgeo.2011.05.013}, pages = {280 -- 289}, year = {2011}, abstract = {This study presents the first Si isotope data of the principle Si pools in soils determined by a UV femtosecond laser ablation system coupled to a multicollector inductively coupled plasma mass spectrometer (MC-ICP-MS). This method reveals accurate and precise Si isotope data on bulk materials, and at high spatial resolution, on the mineral scale. The following Si pools have been investigated: a) the Si source to soils on all major silicate minerals on thin sections from bedrock fragments in the soil profiles; b) bulk soils (particle size <2 mm) after fusion to glass beads with an iridium-strip heater or pressed into powder pellets: c) separated clay fractions as pressed powder pellets and e) separated phytoliths as pressed powder pellets. Multiple analyses of three rock standards, BHVO-2, AGV-1 and RGM-1 as fused glass beads and as pressed powder pellets, reveal delta(30)Si values within the expected range of igneous rocks. The MPI-DING reference glass KL2-G exhibits the same Si isotope composition after remelting by an iridium-strip heater showing that this technique does not alter the isotope composition of the glass. We used this approach to investigated two immature Cambisols developed on sandstone and paragneiss in the Black Forest (Germany), respectively. Bulk soils show a largely uniform Si isotope signature for different horizons and locations, which is close to those of primary quartz and feldspar with delta(30)Si values around -0.4 parts per thousand. Soil clay formation is associated with limited Si mobility, which preserves initial Si isotope signatures of parental minerals. An exception is the organic horizon of the paragneiss catchment where intense weathering leads to a high mobility of Si and significant negative isotope signatures as low as to -1.00 parts per thousand in bulk soils. Biogenic opal in the form of phytoliths, exhibits negative Si isotope signatures of about -0.4 parts per thousand. These results demonstrate that UV femtosecond laser ablation MC-ICP-MS provides a tool to characterize the Si isotope signature of the principle Si pools left behind after weathering and Si transport have altered soils. These results can now serve as a fingerprint of the residual solids that can be used to explain the isotope composition of dissolved Si in soil solutions and river water, which is mostly enriched in the heavy isotopes.}, language = {en} } @article{EhrmannPuppeWanneretal.2012, author = {Ehrmann, Otto and Puppe, Daniel and Wanner, Manfred and Kaczorek, Danuta and Sommer, Michael}, title = {Testate amoebae in 31 mature forest ecosystems - Densities and micro-distribution in soils}, series = {European journal of protistology}, volume = {48}, journal = {European journal of protistology}, number = {3}, publisher = {Elsevier}, address = {Jena}, issn = {0932-4739}, doi = {10.1016/j.ejop.2012.01.003}, pages = {161 -- 168}, year = {2012}, abstract = {We studied testate amoebae and possible correlated abiotic factors in soils of 31 mature forest ecosystems using an easily applicable and spatially explicit method. Simple counting on soil thin-sections with a light microscope resulted in amoeba densities comparable to previously reported values, i.e. 0.1 x 10(8) to 11.5 x 10(8) individuals m(-2) (upper 3 cm of soil). Soil moisture and soil acidity seem to be correlated with amoeba densities. At sites of moderate soil moisture regimes (SMR 2-7) we found higher densities of testate amoebae at pH < 4.5. At wetter sites (SMR >= 8) higher individual densities were recorded also at less acidic sites. The in situ description of amoebae, based on the analysis of a complete soil thin-section, showed a relatively uniform spatial micro-distribution throughout the organic and mineral soil horizons (no testate amoeba clusters). We discuss the pros and cons of the soil thin-section method and suggest it as an additional tool to improve knowledge of the spatial micro-distribution of testate amoebae.}, language = {en} } @article{KaiserBerheSommeretal.2012, author = {Kaiser, Michael and Berhe, Asmeret Asefaw and Sommer, Michael and Kleber, Markus}, title = {Application of ultrasound to disperse soil aggregates of high mechanical stability}, series = {Journal of plant nutrition and soil science = Zeitschrift f{\"u}r Pflanzenern{\"a}hrung und Bodenkunde}, volume = {175}, journal = {Journal of plant nutrition and soil science = Zeitschrift f{\"u}r Pflanzenern{\"a}hrung und Bodenkunde}, number = {4}, publisher = {Wiley-VCH}, address = {Weinheim}, issn = {1436-8730}, doi = {10.1002/jpln.201200077}, pages = {521 -- 526}, year = {2012}, abstract = {Questions remain about the exact ultrasonic energy level that is required to effectively disperse soil aggregates and to what extent this is accompanied by physical damage to individual soil particles. We found maximum aggregate dispersion at energy levels of 1500 J?cm3 and no evidence for the disintegration of particles < 20 mu m even at that energy level. Our findings suggest that sonication at energies much greater than those applied conventionally can disperse aggregates of high mechanical stability.}, language = {en} } @article{KaiserWalterEllerbrocketal.2011, author = {Kaiser, Michael and Walter, K. and Ellerbrock, Ruth H. and Sommer, Michael}, title = {Effects of land use and mineral characteristics on the organic carbon content, and the amount and composition of Na-pyrophosphate-soluble organic matter, in subsurface soils}, series = {European journal of soil science}, volume = {62}, journal = {European journal of soil science}, number = {2}, publisher = {Wiley-Blackwell}, address = {Malden}, issn = {1351-0754}, doi = {10.1111/j.1365-2389.2010.01340.x}, pages = {226 -- 236}, year = {2011}, abstract = {Land use and mineral characteristics affect the ability of surface as well as subsurface soils to sequester organic carbon and their contribution to mitigation of the greenhouse effect. There is less information about the effects of land use and soil properties on the amount and composition of organic matter (OM) for subsurface soils as compared with surface soils. Here we aimed to analyse the long-term (>= 100 years) impact of arable and forest land use and soil mineral characteristics on subsurface soil organic carbon (SOC) contents, as well as on amount and composition of OM sequentially separated by Na pyrophosphate solution (OM(PY)) from subsurface soil samples. Seven soils with different mineral characteristics (Albic and Haplic Luvisol, Colluvic and Haplic Regosol, Haplic and Vertic Cambisol, Haplic Stagnosol) were selected from within Germany. Soil samples were taken from subsurface horizons of forest and adjacent arable sites continuously used for > 100 years. The OM(PY) fractions were analysed for their OC content (OC(PY)) and characterized by Fourier transform infrared spectroscopy. Multiple regression analyses for the arable subsurface soils indicated significant positive relationships between the SOC contents and combined effects of the (i) exchangeable Ca (Ca(ex)) and oxalate-soluble Fe (Fe(ox)) and (ii) the Ca(ex) and Al(ox) contents. For these soils the increase in OC (OC(PY) multiplied by the relative C=O content of OM(PY)) and increasing contents of Ca(ex) indicated that OM(PY) mainly interacts with Ca2+. For the forest subsurface soils (pH < 5), the OC(PY) contents were related to the contents of Na-pyrophosphate-soluble Fe and Al. The long-term arable and forest land use seems to result in different OM(PY)-mineral interactions in subsurface soils. On the basis of this, we hypothesize that a long-term land-use change from arable to forest may lead to a shift from mainly OM(PY)-Ca2+ to mainly OM(PY)-Fe3+ and -Al3+ interactions if the pH of subsurface soils significantly decreases to < 5.}, language = {en} } @article{MuellerKoszinskiBrenningetal.2011, author = {Mueller, Marina Elsa Herta and Koszinski, Sylvia and Brenning, Alexander and Verch, Gernot and Korn, Ulrike and Sommer, Michael}, title = {Within-field variation of mycotoxin contamination of winter wheat is related to indicators of soil moisture}, series = {Plant and soil}, volume = {342}, journal = {Plant and soil}, number = {1-2}, publisher = {Springer}, address = {Dordrecht}, issn = {0032-079X}, doi = {10.1007/s11104-010-0695-5}, pages = {289 -- 300}, year = {2011}, abstract = {Humidity is an important determinant of the mycotoxin production (DON, ZEA) by Fusarium species in the grain ears. From a landscape perspective humidity is not evenly distributed across fields. The topographically-controlled redistribution of water within a single field rather leads to spatially heterogeneous soil water content and air humidity. Therefore we hypothesized that the spatial distribution of mycotoxins is related to these topographically-controlled factors. To test this hypothesis we studied the mycotoxin concentrations at contrasting topographic relief positions, i.e. hilltops and depressions characterized by soils of different soil moisture regimes, on ten winter wheat fields in 2006 and 2007. Maize was the preceding crop and minimum tillage was practiced in the fields. The different topographic positions were associated with moderate differences in DON and ZEA concentrations in 2006, but with significant differences in 2007, with six times higher median ZEA and two times higher median DON detected at depression sites compared to the hilltops. The depression sites correspond to a higher topographic wetness index as well as redoximorphic properties in soil profiles, which empirically supports our hypothesis at least for years showing wetter conditions in sensitive time windows for Fusarium infections.}, language = {en} } @article{RieckhGerkeSiemensetal.2014, author = {Rieckh, Helene and Gerke, Horst H. and Siemens, Jan and Sommer, Michael}, title = {Water and dissolved carbon fluxes in an eroding soil landscape depending on terrain position}, series = {Vadose zone journal}, volume = {13}, journal = {Vadose zone journal}, number = {7}, publisher = {Soil Science Society of America}, address = {Madison}, issn = {1539-1663}, doi = {10.2136/vzj2013.10.0173}, pages = {14}, year = {2014}, abstract = {Leaching of dissolved C in arable hummocky ground moraine soil landscapes is characterized by a spatial continuum of more or less erosion-affected Luvisols, Calcaric Regosols at exposed positions, and Colluvic Regosols in depressions. Our objective was to estimate the fluxes of dissolved C in four differently eroded soils as affected by erosion-induced pedological and soil structural alterations. In this model study, we considered landscape position effects by adapting the water table as the bottom boundary condition and erosion effects by using pedon-specific soil hydraulic properties. The one-dimensional vertical water movement was described with the Richards equation using HYDRUS-1D. Solute fluxes were obtained by combining calculated water fluxes with concentrations of dissolved organic and inorganic C (DOC and DIC, respectively) measured from soil solution extracted by suction cups at biweekly intervals. In the 3-yr period (2010-2012), DOC fluxes in the 2-m soil depth were similar at the three non-colluvic locations with -0.8 +/- 0.1 g m(-2) yr(-1) (i.e., outflow) but were 0.4 g m(-2) yr(-1) (i.e., input) in the depression. The DIC fluxes ranged from -10.2 g m(-2) yr(-1) for the eroded Luvisol, -9.2 g m(-2) yr(-1) for the Luvisol, and -6.1 g m(-2) yr(-1) for the Calcaric Regosol to 3.2 g m(-2) yr(-1) for the Colluvic Regosol. The temporal variations in DOC and DIC fluxes were controlled by water fluxes. The spatially distributed leaching results corroborate the hypothesis that the effects of soil erosion influence fluxes through modified hydraulic and transport properties and terrain-dependent boundary conditions.}, language = {en} } @article{WielandDalchowSommeretal.2011, author = {Wieland, Ralf and Dalchow, Claus and Sommer, Michael and Fukuda, Kyoko}, title = {Multi-Scale Landscape Analysis (MSLA) a method to identify correlation of relief with ecological point data}, series = {Ecological informatics : an international journal on ecoinformatics and computational ecolog}, volume = {6}, journal = {Ecological informatics : an international journal on ecoinformatics and computational ecolog}, number = {2}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1574-9541}, doi = {10.1016/j.ecoinf.2010.09.002}, pages = {164 -- 169}, year = {2011}, abstract = {A common problem in ecology is identifying the relationship between relief and site properties obtainable only by point measurements. The method of Multi-Scale Landscape Analysis (MSLA) identifies such correlations. MSLA combines frequency filtering of the digital elevation model (DEM) with an estimation of the optimum filter coefficients using an optimization procedure. Tested using point data of soil decarbonation from a German young moraine landscape, MSLA provided significant results. Implemented within open source software SAMT. MSLA is comfortable and flexible to use, offering applications for numerous other spatial analysis problems.}, language = {en} } @article{KaylerKaiserGessleretal.2011, author = {Kayler, Z. E. and Kaiser, Michael and Gessler, A. and Ellerbrock, Ruth H. and Sommer, Michael}, title = {Application of delta C-13 and delta N-15 isotopic signatures of organic matter fractions sequentially separated from adjacent arable and forest soils to identify carbon stabilization mechanisms}, series = {Biogeosciences}, volume = {8}, journal = {Biogeosciences}, number = {10}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {1726-4170}, doi = {10.5194/bg-8-2895-2011}, pages = {2895 -- 2906}, year = {2011}, abstract = {Identifying the chemical mechanisms behind soil carbon bound in organo-mineral complexes is necessary to determine the degree to which soil organic carbon is stabilized belowground. Analysis of delta C-13 and delta N-15 isotopic signatures of stabilized OM fractions along with soil mineral characteristics may yield important information about OM-mineral associations and their processing history. We anlayzed the delta C-13 and delta N-15 isotopic signatures from two organic matter (OM) fractions along with soil mineral proxies to identify the likely binding mechanisms involved. We analyzed OM fractions hypothesized to contain carbon stabilized through organo-mineral complexes: (1) OM separated chemically with sodium pyrophosphate (OM(PY)) and (2) OM occluded in micro-structures found in the chemical extraction residue (OM(ER)). Because the OM fractions were separated from five different soils with paired forest and arable land use histories, we could address the impact of land use change on carbon binding and processing mechanisms. We used partial least squares regression to analyze patterns in the isotopic signature of OM with established mineral and chemical proxies indicative for certain binding mechanisms. We found different mechanisms predominate in each land use type. For arable soils, the formation of OM(PY)-Ca-mineral associations was identified as an important OM binding mechanism. Therefore, we hypothesize an increased stabilization of microbial processed OM(PY) through Ca2+ interactions. In general, we found the forest soils to contain on average 10\% more stabilized carbon relative to total carbon stocks, than the agricultural counter part. In forest soils, we found a positive relationship between isotopic signatures of OM(PY) and the ratio of soil organic carbon content to soil surface area (SOC/SSA). This indicates that the OM(PY) fractions of forest soils represent layers of slower exchange not directly attached to mineral surfaces. From the isotopic composition of the OM(ER) fraction, we conclude that the OM in this fraction from both land use types have undergone a different pathway to stabilization that does not involve microbial processing, which may include OM which is highly protected within soil micro-structures.}, language = {en} } @article{RieckhGerkeSommer2012, author = {Rieckh, Helene and Gerke, Horst H. and Sommer, Michael}, title = {Hydraulic properties of characteristic horizons depending on relief position and structure in a hummocky glacial soil landscape}, series = {Soil \& tillage research : an international journal on research and development in soil tillage and field traffic, and their relationships with soil environment, land use and crop production}, volume = {125}, journal = {Soil \& tillage research : an international journal on research and development in soil tillage and field traffic, and their relationships with soil environment, land use and crop production}, number = {1}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0167-1987}, doi = {10.1016/j.still.2012.07.004}, pages = {123 -- 131}, year = {2012}, abstract = {The hummocky ground moraine soil landscape forms a spatial continuum of more or less eroded and depositional soils developed from glacial till under intensive agricultural cultivation. Measurements of soil hydraulic properties in the laboratory on soil cores are mostly limited to some characteristic horizons. However, these horizons can vary in thickness or structural and pedological development depending on relief position. This paper compares soil hydraulic properties of the same soil horizons sampled at different relief positions in a single field representing various degrees of soil erosion/deposition. Water retention curves were determined from undisturbed core samples using sand and kaolin beds with hanging water column and pressure chambers, and the unsaturated hydraulic conductivity using the double-membrane apparatus. Data were fitted to the van Genuchten-Mualem function (VGM) using the nonlinear curve fitting program RETC. The desorption water retention curves for the soil horizons were different and depended on the soil structural development that could be related with the intensity of erosion history at each landscape position. The greatest differences in hydraulic functions were found for the E, Bt, and C horizons. The fitted soil water retention curves reflected these differences mainly in the values of the VGM curve parameters n and theta(s). The landscape features that have the strongest differentiating effect are related to erosion and distance towards the water table. The results can help improving pedotransfer approaches for the estimation of spatially distributed hydraulic parameters for modelling the water movement in hummocky soil landscapes as basis for establishing landscape scale water and element balances.}, language = {en} } @article{PuppeKaczorekWanneretal.2014, author = {Puppe, Daniel and Kaczorek, Danuta and Wanner, Manfred and Sommer, Michael}, title = {Dynamics and drivers of the protozoic Si pool along a 10-year chronosequence of initial ecosystem states}, series = {Ecological engineering : the journal of ecotechnology}, volume = {70}, journal = {Ecological engineering : the journal of ecotechnology}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0925-8574}, doi = {10.1016/j.ecoleng.2014.06.011}, pages = {477 -- 482}, year = {2014}, abstract = {The size and dynamics of biogenic silicon (BSi) pools influence silicon (Si) fluxes from terrestrial to aquatic ecosystems. The research focus up to now was on the role of plants in Si cycling. In recent studies on old forests annual biosilicification rates of idiosomic testate amoebae (i.e. TA producing self-secreted silica shells) were shown to be of the order of Si uptake by trees. However, no comparable data exist for initial ecosystems. We analyzed the protozoic BSi pool (idiosomic TA), corresponding annual biosilicification rates and readily available and amorphous Si fractions along a 10-year chronosequence in a post-mining landscape in Brandenburg, Germany. Idiosomic Si pools ranged from 3 to 680 g Si ha(-1) and were about 3-4 times higher at vegetated compared to uncovered spots. They increased significantly with age and were related to temporal development of soil chemical properties. The calculation of annual biosilicification resulted in maxima between 2 and 16 kg Si ha(-1) with rates always higher at vegetated spots. Our results showed that the BSi pool of idiosomic TA is built up rapidly during the initial phases of ecosystem development and is strongly linked to plant growth. Furthermore, our findings highlight the importance of TA for Si cycling in young artificial ecosystems. (C) 2014 Elsevier B.V. All rights reserved.}, language = {en} } @misc{WehrhanRaunekerSommer2016, author = {Wehrhan, Marc and Rauneker, Philipp and Sommer, Michael}, title = {UAV-Based estimation of carbon exports from heterogeneous soil landscapes}, series = {Sensors}, journal = {Sensors}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-407706}, pages = {24}, year = {2016}, abstract = {The advantages of remote sensing using Unmanned Aerial Vehicles (UAVs) are a high spatial resolution of images, temporal flexibility and narrow-band spectral data from different wavelengths domains. This enables the detection of spatio-temporal dynamics of environmental variables, like plant-related carbon dynamics in agricultural landscapes. In this paper, we quantify spatial patterns of fresh phytomass and related carbon (C) export using imagery captured by a 12-band multispectral camera mounted on the fixed wing UAV Carolo P360. The study was performed in 2014 at the experimental area CarboZALF-D in NE Germany. From radiometrically corrected and calibrated images of lucerne (Medicago sativa), the performance of four commonly used vegetation indices (VIs) was tested using band combinations of six near-infrared bands. The highest correlation between ground-based measurements of fresh phytomass of lucerne and VIs was obtained for the Enhanced Vegetation Index (EVI) using near-infrared band b(899). The resulting map was transformed into dry phytomass and finally upscaled to total C export by harvest. The observed spatial variability at field- and plot-scale could be attributed to small-scale soil heterogeneity in part.}, language = {en} } @misc{PohlHoffmannHagemannetal.2015, author = {Pohl, Madlen and Hoffmann, M. and Hagemann, Ulrike and Giebels, M. and Albiac Borraz, E. and Sommer, Michael and Augustin, J{\"u}rgen}, title = {Dynamic C and N stocks}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {496}, issn = {1866-8372}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-408184}, pages = {16}, year = {2015}, abstract = {The drainage and cultivation of fen peatlands create complex small-scale mosaics of soils with extremely variable soil organic carbon (SOC) stocks and groundwater levels (GWLs). To date, the significance of such sites as sources or sinks for greenhouse gases such as CO2 and CH4 is still unclear, especially if the sites are used for cropland. As individual control factors such as GWL fail to account for this complexity, holistic approaches combining gas fluxes with the underlying processes are required to understand the carbon (C) gas exchange of drained fens. It can be assumed that the stocks of SOC and N located above the variable GWL - defined as dynamic C and N stocks - play a key role in the regulation of the plant- and microbially mediated CO2 fluxes in these soils and, inversely, for CH4. To test this assumption, the present study analysed the C gas exchange (gross primary production - GPP; ecosystem respiration - R-eco; net ecosystem exchange - NEE; CH4) of maize using manual chambers for 4 years. The study sites were located near Paulinenaue, Germany, where we selected three soil types representing the full gradient of GWL and SOC stocks (0-1 m) of the landscape: (a) Haplic Arenosol (AR; 8 kg C m(-2)); (b) Mollic Gleysol (GL; 38 kg C m(-2)); and (c) Hemic Histosol (HS; 87 kg C m(-2)). Daily GWL data were used to calculate dynamic SOC (SOCdyn) and N (N-dyn) stocks. Average annual NEE differed considerably among sites, ranging from 47 +/- 30 g C m(-2) yr(-1) in AR to -305 +/- 123 g C m(-2) yr(-1) in GL and -127 +/- 212 g C m(-2) yr(-1) in HS. While static SOC and N stocks showed no significant effect on C fluxes, SOCdyn and N-dyn and their interaction with GWL strongly influenced the C gas exchange, particularly NEE and the GPP : R-eco ratio. Moreover, based on nonlinear regression analysis, 86\% of NEE variability was explained by GWL and SOCdyn. The observed high relevance of dynamic SOC and N stocks in the aerobic zone for plant and soil gas exchange likely originates from the effects of GWL-dependent N availability on C formation and transformation processes in the plant-soil system, which promote CO2 input via GPP more than CO2 emission via R-eco. The process-oriented approach of dynamic C and N stocks is a promising, potentially generalisable method for system-oriented investigations of the C gas exchange of groundwater-influenced soils and could be expanded to other nutrients and soil characteristics. However, in order to assess the climate impact of arable sites on drained peatlands, it is always necessary to consider the entire range of groundwater-influenced mineral and organic soils and their respective areal extent within the soil landscape.}, language = {en} } @misc{DoetterlBerheNadeuetal.2016, author = {Doetterl, Sebastian and Berhe, Asmeret Asefaw and Nadeu, Elisabet and Wang, Zhengang and Sommer, Michael and Fiener, Peter}, title = {Erosion, deposition and soil carbon: A review of process-level controls, experimental tools and models to address C cycling in dynamic landscapes}, series = {Earth science reviews : the international geological journal bridging the gap between research articles and textbooks}, volume = {154}, journal = {Earth science reviews : the international geological journal bridging the gap between research articles and textbooks}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0012-8252}, doi = {10.1016/j.earscirev.2015.12.005}, pages = {102 -- 122}, year = {2016}, abstract = {The role of soil erosion in terrestrial carbon (C) sequestration and release remains one of the most important uncertainties in our attempts to determine the potential of soils to mediate climate change. Despite its widely recognized importance for terrestrial C sequestration, to date, no Earth System Model (ESM) implements soil erosion effects on carbon cycling in sufficient detail. So far, available studies have mostly investigated the magnitude of erosional C transport and in-situ measurements of vertical C fluxes on the catchment or regional scale. Recognizing the need to adequately represent C erosion processes and controls in ESMs, we provide a comprehensive cross-disciplinary review on lateral C redistribution in the landscape and discuss the implications for bio-geochemical cycling of carbon. We present current knowledge on the role of erosional C distribution in controlling the stabilization and release of C in soils, taking into consideration the important geomorphic, ecological, hydrologic, pedologic and micro-climatic processes and controls that affect soil organic carbon (SOC) stock, fluxes, and persistence in dynamic landscapes. Further, we provide an overview on latest experimental and modelling approaches that are being used to investigate the role of erosion in the carbon cycle. Finally, to advance our understanding of the role of soil redistribution in biogeochemical cycles of essential elements, we discuss the most promising topics for future research in this field. (C) 2015 Elsevier B.V. All rights reserved.}, language = {en} } @article{GerkeRieckhSommer2016, author = {Gerke, Horst H. and Rieckh, Helene and Sommer, Michael}, title = {Interactions between crop, water, and dissolved organic and inorganic carbon in a hummocky landscape with erosion-affected pedogenesis}, series = {Macromolecular rapid communications}, volume = {156}, journal = {Macromolecular rapid communications}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0167-1987}, doi = {10.1016/j.still.2015.09.003}, pages = {230 -- 244}, year = {2016}, abstract = {Hummocky soil landscapes are characterized by 3D spatial patterns of soil types that result from erosion-affected pedogenesis. Due to tillage and water erosion, truncated profiles have been formed at steep and mid slopes and colluvial soils at hollows, while intact profiles remained at plateau positions. Pedogenetic variations in soil horizons lead to spatial differences in the soil water balance at hillslope positions. Here, possible interactions between erosion affected soil properties, the water balances, and the crop growth and feedback effects of erosion on the leaching rates were assumed. The hypothesis was tested by water balance simulations comparing uniform with hillslope position-specific crop and root growths for soils at plateau, flat mid slope, steep slope, and hollow using the Hydrus-1D program. The boundary condition data were monitored at the CarboZALF-D experimental field site, which was cropped with perennial lucerne (Medicago sativa L.) in 2013 and 2014. Crop and root growth at the four hillslope positions was assumed proportional to observed leaf area index (LAI). Fluxes of dissolved organic and inorganic carbon (DOC, DIC) were obtained from simulated water fluxes and measured DOC and DIC concentrations. For the colluvic soil at hollow, the crop growth was initially highest and later limited by an increasing water table; here the predominately upward flow led to a net input in DIC and DOC. For the truncated soils at steep slopes, simulations support the hypothesis that reduced crop growth caused an increase in percolation and DIC leaching from the subsoil horizons, which in turn led to accelerated soil development and more soil variations along eroding hillslopes in arable soil landscapes. (C) 2015 Elsevier B.V. All rights reserved.}, language = {en} } @misc{SommerAugustinKleber2016, author = {Sommer, Michael and Augustin, J{\"u}rgen and Kleber, M.}, title = {Feedbacks of soil erosion on SOC patterns and carbon dynamics in agricultural landscapes-The CarboZALF experiment}, series = {Journal of real-time image processing}, volume = {156}, journal = {Journal of real-time image processing}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0167-1987}, doi = {10.1016/j.still.2015.09.015}, pages = {182 -- 184}, year = {2016}, language = {en} } @article{WannerSeidlLampaHoehnetal.2016, author = {Wanner, Manfred and Seidl-Lampa, Barbara and H{\"o}hn, Axel and Puppe, Daniel and Meisterfeld, Ralf and Sommer, Michael}, title = {Culture growth of testate amoebae under different silicon concentrations}, series = {European journal of protistology}, volume = {56}, journal = {European journal of protistology}, publisher = {Royal Society of Chemistry}, address = {Jena}, organization = {Veritas Collaboration}, issn = {0932-4739}, doi = {10.1016/j.ejop.2016.08.008}, pages = {171 -- 179}, year = {2016}, abstract = {Testate amoebae with self-secreted siliceous shell platelets ("idiosomes") play an important role in terrestrial silicon (Si) cycles. In this context, Si-dependent culture growth dynamics of idiosomic testate amoebae are of interest. Clonal cultures of idiosomic testate amoebae were analyzed under three different Si concentrations: low (50 mu mol L-1), moderate/site-specific (150 mu mol L-1) and high Si supply (500 mu mol L-1). Food (Saccharomyces cerevisiae) was provided in surplus. (i) Shell size of four different clones of idiosomic testate amoebae either decreased (Trinema galeata, Euglypha filifera cf.), increased (E. rotunda cf.), or did not change (E. rotunda) under the lowest Si concentration (50 mu mol Si L-1). (ii) Culture growth of idiosomic Euglypha rotunda was dependent on Si concentration. The more Si available in the culture medium, the earlier the entry into exponential growth phase. (iii) Culture growth of idiosomic Euglypha rotunda was dependent on origin of inoculum. Amoebae previously cultured under a moderate Si concentration revealed highest sustainability in consecutive cultures. Amoebae derived from cultures with high Si concentrations showed rapid culture growth which finished early in consecutive cultures. (iv) Si (diluted in the culture medium) was absorbed by amoebae and fixed in the amoeba shells resulting in decreased Si concentrations. (C) 2016 Elsevier GmbH. All rights reserved.}, language = {en} } @article{PuppeHoehnKaczoreketal.2016, author = {Puppe, Daniel and H{\"o}hn, Axel and Kaczorek, Danuta and Wanner, Manfred and Sommer, Michael}, title = {As time goes by-Spatiotemporal changes of biogenic Si pools in initial soils of an artificial catchment in NE Germany}, series = {Applied soil ecology : a section of agriculture, ecosystems \& environment}, volume = {105}, journal = {Applied soil ecology : a section of agriculture, ecosystems \& environment}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0929-1393}, doi = {10.1016/j.apsoil.2016.01.020}, pages = {9 -- 16}, year = {2016}, language = {en} } @article{KaiserZedererEllerbrocketal.2016, author = {Kaiser, Michael and Zederer, Dan P. and Ellerbrock, Ruth H. and Sommer, Michael and Ludwig, Bernard}, title = {Effects of mineral characteristics on content, composition, and stability of organic matter fractions separated from seven forest topsoils of different pedogenesis}, series = {Geoderma : an international journal of soil science}, volume = {263}, journal = {Geoderma : an international journal of soil science}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0016-7061}, doi = {10.1016/j.geoderma.2015.08.029}, pages = {1 -- 7}, year = {2016}, abstract = {Mineral topsoils possess large organic carbon (OC) contents but there is only limited knowledge on the mechanisms controlling the preservation of organic matter (OM) against microbial decay. Samples were taken from the uppermost mineral topsoil horizon (0 to 5 cm) of seven sites under mature deciduous forest showing OC contents between 69 and 164 g kg(-1) and a wide range in mineral characteristics. At first, organic particles and the water-extractable OM were removed from the soil samples. Thereafter, Na-pyrophosphate extractable organic matter (OM(PY)), assumed to be indicative for OM bound via cation mediated interactions, and the OM remaining in the extraction residue (OM(ER)), supposed to be indicative for OM occluded in mechanically highly stable micro-aggregates, were sequentially separated and quantified. The composition of OM(PY) and OM(ER) was analyzed by FTIR and their stability by C-14 measurements. The OC remaining in the extraction residues accounted for 38 to 59\% of the bulk soil OC (SOC) suggesting a much larger relevance of OM(ER) for the OM dynamic in the analyzed soils as compared with OM(PY) that accounted for 1.6 to 7.5\% of the SOC. The FUR analyses revealed a lower relative proportion of C=O groups in OM(ER) compared to OM(PY) indicating differences in the degree of microbial processing between these fractions. Correlation analyses suggest an increase in the stability of OM(PY) with the soil pH and contents of Na-pyrophosphate soluble Fe, Al, and Mg and an increase in the stability of OM(ER) with the soil pH and the contents of clay and oxalate-soluble Fe and Al. Despite the detected influence of soil mineral characteristics on the turnover of OM(PY) and OM(ER), the Delta C-14 signatures indicated mean residence times less than 100 years. The presence of less stabilized OM in these fractions can be derived from methodological uncertainties and/or the fast cycling compartment of mineral-associated OM. (C) 2015 Elsevier B.V. All rights reserved.}, language = {en} } @article{WehrhanRaunekerSommer2016, author = {Wehrhan, Marc and Rauneker, Philipp and Sommer, Michael}, title = {UAV-Based Estimation of Carbon Exports from Heterogeneous Soil Landscapes-A Case Study from the CarboZALF Experimental Area}, series = {SENSORS}, volume = {16}, journal = {SENSORS}, publisher = {MDPI}, address = {Basel}, issn = {1424-8220}, doi = {10.3390/s16020255}, pages = {24}, year = {2016}, abstract = {The advantages of remote sensing using Unmanned Aerial Vehicles (UAVs) are a high spatial resolution of images, temporal flexibility and narrow-band spectral data from different wavelengths domains. This enables the detection of spatio-temporal dynamics of environmental variables, like plant-related carbon dynamics in agricultural landscapes. In this paper, we quantify spatial patterns of fresh phytomass and related carbon (C) export using imagery captured by a 12-band multispectral camera mounted on the fixed wing UAV Carolo P360. The study was performed in 2014 at the experimental area CarboZALF-D in NE Germany. From radiometrically corrected and calibrated images of lucerne (Medicago sativa), the performance of four commonly used vegetation indices (VIs) was tested using band combinations of six near-infrared bands. The highest correlation between ground-based measurements of fresh phytomass of lucerne and VIs was obtained for the Enhanced Vegetation Index (EVI) using near-infrared band b(899). The resulting map was transformed into dry phytomass and finally upscaled to total C export by harvest. The observed spatial variability at field- and plot-scale could be attributed to small-scale soil heterogeneity in part.}, language = {en} } @article{PuppeEhrmannKaczoreketal.2015, author = {Puppe, Daniel and Ehrmann, Otto and Kaczorek, Danuta and Wanner, Manfred and Sommer, Michael}, title = {The protozoic Si pool in temperate forest ecosystems - Quantification, abiotic controls and interactions with earthworms}, series = {Geoderma : an international journal of soil science}, volume = {243}, journal = {Geoderma : an international journal of soil science}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0016-7061}, doi = {10.1016/j.geoderma.2014.12.018}, pages = {196 -- 204}, year = {2015}, abstract = {Biogenic silicon (BSI) pools influence Si cycling in terrestrial ecosystems. As research has been focused mainly on phytogenic BSi pools until now, there is only little information available on quantities of other BSi pools. There are no systematic studies on protozoic Si pools - here represented by idiosomic testate amoebae (TA) - and abiotic and biotic influences in temperate forest ecosystems. We selected ten old forests along a strong gradient in soil forming factors (especially parent material and climate), soil properties and humus forms. We quantified idiosomic Si pools, corresponding annual biosilicification, plant-available and amorphous Si fractions of topsoil horizons. Furthermore, we analyzed the potential influences of abiotic factors (e.g. soil pH) and earthworms on idiosomic Si pools. While idiosomic Si pools were relatively small (up to 5 kg Si ha(-1)), annual biosilicification rates of living TA (17-80 kg Si ha(-1)) were comparable to or even exceeded reported data of annual Si uptake by trees. Soil pH exerted a strong, non-linear control on plant-available Si. Surprisingly, no relationship between Si supply and idiosomic Si pools could be found (no Si limitation). Instead, idiosomic Si pools showed a strong, negative relationship to earthworm biomasses, which corresponded to humus forms. We concluded that earthworms control idiosomic Si pools in forest soils by direct (feeding, competition) and/or indirect mechanisms (e.g. change of habitat structure). Earthworms themselves were strongly influenced by soil pH: Below a threshold of pH 3.8 no endogeic or anecic earthworms existed. As soil pH is a result of weathering and acidification idiosomic Si pools are indirectly, but ultimately controlled by soil forming factors, mainly parent material and climate. (C) 2014 Elsevier B.V. All rights reserved.}, language = {en} } @article{PohlHoffmannHagemannetal.2015, author = {Pohl, M. and Hoffmann, M. and Hagemann, U. and Giebels, M. and Borraz, Elisa Albiac and Sommer, Michael and Augustin, J{\"u}rgen}, title = {Dynamic C and N stocks - key factors controlling the C gas exchange of maize in heterogenous peatland}, series = {Biogeosciences}, volume = {12}, journal = {Biogeosciences}, number = {9}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {1726-4170}, doi = {10.5194/bg-12-2737-2015}, pages = {2737 -- 2752}, year = {2015}, abstract = {The drainage and cultivation of fen peatlands create complex small-scale mosaics of soils with extremely variable soil organic carbon (SOC) stocks and groundwater levels (GWLs). To date, the significance of such sites as sources or sinks for greenhouse gases such as CO2 and CH4 is still unclear, especially if the sites are used for cropland. As individual control factors such as GWL fail to account for this complexity, holistic approaches combining gas fluxes with the underlying processes are required to understand the carbon (C) gas exchange of drained fens. It can be assumed that the stocks of SOC and N located above the variable GWL - defined as dynamic C and N stocks - play a key role in the regulation of the plant- and microbially mediated CO2 fluxes in these soils and, inversely, for CH4. To test this assumption, the present study analysed the C gas exchange (gross primary production - GPP; ecosystem respiration - R-eco; net ecosystem exchange - NEE; CH4) of maize using manual chambers for 4 years. The study sites were located near Paulinenaue, Germany, where we selected three soil types representing the full gradient of GWL and SOC stocks (0-1 m) of the landscape: (a) Haplic Arenosol (AR; 8 kg C m(-2)); (b) Mollic Gleysol (GL; 38 kg C m(-2)); and (c) Hemic Histosol (HS; 87 kg C m(-2)). Daily GWL data were used to calculate dynamic SOC (SOCdyn) and N (N-dyn) stocks. Average annual NEE differed considerably among sites, ranging from 47 +/- 30 g C m(-2) yr(-1) in AR to -305 +/- 123 g C m(-2) yr(-1) in GL and -127 +/- 212 g C m(-2) yr(-1) in HS. While static SOC and N stocks showed no significant effect on C fluxes, SOCdyn and N-dyn and their interaction with GWL strongly influenced the C gas exchange, particularly NEE and the GPP : R-eco ratio. Moreover, based on nonlinear regression analysis, 86\% of NEE variability was explained by GWL and SOCdyn. The observed high relevance of dynamic SOC and N stocks in the aerobic zone for plant and soil gas exchange likely originates from the effects of GWL-dependent N availability on C formation and transformation processes in the plant-soil system, which promote CO2 input via GPP more than CO2 emission via R-eco. The process-oriented approach of dynamic C and N stocks is a promising, potentially generalisable method for system-oriented investigations of the C gas exchange of groundwater-influenced soils and could be expanded to other nutrients and soil characteristics. However, in order to assess the climate impact of arable sites on drained peatlands, it is always necessary to consider the entire range of groundwater-influenced mineral and organic soils and their respective areal extent within the soil landscape.}, language = {en} } @misc{HoffmannSchulzHankeAlbaetal.2017, author = {Hoffmann, Mathias and Schulz-Hanke, Maximilian and Alba, Juana Garcia and Jurisch, Nicole and Hagemann, Ulrike and Sachs, Torsten and Sommer, Michael and Augustin, J{\"u}rgen}, title = {A simple calculation algorithm to separate high-resolution CH4 flux measurements into ebullition- and diffusion-derived components}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe}, number = {604}, issn = {1866-8372}, doi = {10.25932/publishup-41665}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-416659}, pages = {109 -- 118}, year = {2017}, abstract = {Processes driving the production, transformation and transport of methane (CH4) in wetland ecosystems are highly complex. We present a simple calculation algorithm to separate open-water CH4 fluxes measured with automatic chambers into diffusion- and ebullition-derived components. This helps to reveal underlying dynamics, to identify potential environmental drivers and, thus, to calculate reliable CH4 emission estimates. The flux separation is based on identification of ebullition-related sudden concentration changes during single measurements. Therefore, a variable ebullition filter is applied, using the lower and upper quartile and the interquartile range (IQR). Automation of data processing is achieved by using an established R script, adjusted for the purpose of CH4 flux calculation. The algorithm was validated by performing a laboratory experiment and tested using flux measurement data (July to September 2013) from a former fen grassland site, which converted into a shallow lake as a result of rewetting. Ebullition and diffusion contributed equally (46 and 55 \%) to total CH4 emissions, which is comparable to ratios given in the literature. Moreover, the separation algorithm revealed a concealed shift in the diurnal trend of diffusive fluxes throughout the measurement period. The water temperature gradient was identified as one of the major drivers of diffusive CH4 emissions, whereas no significant driver was found in the case of erratic CH4 ebullition events.}, language = {en} } @misc{HoffmannJurischAlbaetal.2017, author = {Hoffmann, Mathias and Jurisch, Nicole and Alba, Juana Garcia and Borraz, Elisa Albiac and Schmidt, Marten and Huth, Vytas and Rogasik, Helmut and Rieckh, Helene and Verch, Gernot and Sommer, Michael and Augustin, J{\"u}rgen}, title = {Detecting small-scale spatial heterogeneity and temporal dynamics of soil organic carbon (SOC) stocks}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {666}, issn = {1866-8372}, doi = {10.25932/publishup-41711}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-417118}, pages = {17}, year = {2017}, abstract = {Carbon (C) sequestration in soils plays a key role in the global C cycle. It is therefore crucial to adequately monitor dynamics in soil organic carbon (Delta SOC) stocks when aiming to reveal underlying processes and potential drivers. However, small-scale spatial (10-30 m) and temporal changes in SOC stocks, particularly pronounced in arable lands, are hard to assess. The main reasons for this are limitations of the well-established methods. On the one hand, repeated soil inventories, often used in long-term field trials, reveal spatial patterns and trends in Delta SOC but require a longer observation period and a sufficient number of repetitions. On the other hand, eddy covariance measurements of C fluxes towards a complete C budget of the soil-plant-atmosphere system may help to obtain temporal Delta SOC patterns but lack small-scale spatial resolution. To overcome these limitations, this study presents a reliable method to detect both short-term temporal dynamics as well as small-scale spatial differences of Delta SOC using measurements of the net ecosystem carbon balance (NECB) as a proxy. To estimate the NECB, a combination of automatic chamber (AC) measurements of CO2 exchange and empirically modeled aboveground biomass development (NPPshoot / were used. To verify our method, results were compared with Delta SOC observed by soil resampling. Soil resampling and AC measurements were performed from 2010 to 2014 at a colluvial depression located in the hummocky ground moraine landscape of northeastern Germany. The measurement site is characterized by a variable groundwater level (GWL) and pronounced small-scale spatial heterogeneity regarding SOC and nitrogen (Nt) stocks. Tendencies and magnitude of Delta SOC values derived by AC measurements and repeated soil inventories corresponded well. The period of maximum plant growth was identified as being most important for the development of spatial differences in annual Delta SOC. Hence, we were able to confirm that AC-based C budgets are able to reveal small-scale spatial differences and short-term temporal dynamics of Delta SOC.}, language = {en} } @misc{PuppeHoehnKaczoreketal.2017, author = {Puppe, Daniel and H{\"o}hn, Axel and Kaczorek, Danuta and Wanner, Manfred and Wehrhan, Marc and Sommer, Michael}, title = {How big is the influence of biogenic silicon pools on short-term changes in water-soluble silicon in soils?}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch Naturwissenschaftliche Reihe}, number = {633}, doi = {10.25932/publishup-41714}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-417141}, pages = {5239 -- 5252}, year = {2017}, abstract = {The significance of biogenic silicon (BSi) pools as a key factor for the control of Si fluxes from terrestrial to aquatic ecosystems has been recognized for decades. However, while most research has been focused on phytogenic Si pools, knowledge of other BSi pools is still limited. We hypothesized that different BSi pools influence short-term changes in the water-soluble Si fraction in soils to different extents. To test our hypothesis we took plant (Calamagrostis epigejos, Phragmites australis) and soil samples in an artificial catchment in a post-mining landscape in the state of Brandenburg, Germany. We quantified phytogenic (phytoliths), protistic (diatom frustules and testate amoeba shells) and zoogenic (sponge spicules) Si pools as well as Tironextractable and water-soluble Si fractions in soils at the beginning (t(0)) and after 10 years (t(10)) of ecosystem development. As expected the results of Tiron extraction showed that there are no consistent changes in the amorphous Si pool at Chicken Creek (Huhnerwasser) as early as after 10 years. In contrast to t(0) we found increased water-soluble Si and BSi pools at t(10); thus we concluded that BSi pools are the main driver of short-term changes in water-soluble Si. However, because total BSi represents only small proportions of water-soluble Si at t(0) (< 2 \%) and t(10) (2.8-4.3 \%) we further concluded that smaller (< 5 mu m) and/or fragile phytogenic Si structures have the biggest impact on short-term changes in water-soluble Si. In this context, extracted phytoliths (> 5 mu m) only amounted to about 16\% of total Si con-tents of plant materials of C. epigejos and P. australis at t(10); thus about 84\% of small-scale and/or fragile phytogenic Si is not quantified by the used phytolith extraction method. Analyses of small-scale and fragile phytogenic Si structures are urgently needed in future work as they seem to represent the biggest and most reactive Si pool in soils. Thus they are the most important drivers of Si cycling in terrestrial biogeosystems.}, language = {en} } @article{vanderMeijTemmeWallingaetal.2017, author = {van der Meij, Marijn W. and Temme, Arnaud J. A. M. and Wallinga, J. and Hierold, W. and Sommer, Michael}, title = {Topography reconstruction of eroding landscapes - A case study from a hummocky ground moraine (CarboZALF-D)}, series = {Geomorphology : an international journal on pure and applied geomorphology}, volume = {295}, journal = {Geomorphology : an international journal on pure and applied geomorphology}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0169-555X}, doi = {10.1016/j.geomorph.2017.08.015}, pages = {758 -- 772}, year = {2017}, abstract = {Erosion processes, aggravated by human activity, have a large impact on the spatial variation of soil and topographic properties. Knowledge of the topography prior to human-induced erosion (paleotopography) in naturally stable landscapes is valuable for identifying vulnerable landscape positions and is required as starting point for erosion modelling exercises. However, developing accurate reconstructions of paleotopography provide a major challenge for geomorphologists. Here, we present a set of paleotopographies for a closed kettle hole catchment in north-east Germany (4 ha), obtained through different reconstruction approaches. Current soil and colluvium thickness, estimated from a dataset of 264 soil descriptions using Ordinary Kriging, were used as input for a mass balance, or were compared with a set of undisturbed soil thicknesses to estimate the amount of erosion. The performance of the different approaches was assessed with cross-validation and the count of mispredicted eroded, depositional or stable landscape positions. The paleotopographic reconstruction approach based on the average thickness of undisturbed soils in the study area showed the best performance. This thickness (1.00 m) is comparable to the average undisturbed soil thickness in the region and in line with global correlations of soil thickness as a function of rainfall and initial CaCO3 content. The performance of the different approaches depended more on mispredictions of landscape position due to the assumption of a spatially constant initial soil depth than on small variations in this depth. To conclude, we mention several methodological and practical points of attention for future topography reconstruction studies, concerning data quality and availability, spatial configuration of data and other processes affecting topography. (C) 2017 Elsevier B.V. All rights reserved.}, language = {en} } @article{PuppeHoehnKaczoreketal.2017, author = {Puppe, Daniel and H{\"o}hn, Axel and Kaczorek, Danuta and Wanner, Manfred and Wehrhan, Marc and Sommer, Michael}, title = {How big is the influence of biogenic silicon pools on short-term changes in water-soluble silicon in soils? Implications from a study of a 10-year-old soil-plant system}, series = {Biogeosciences}, volume = {14}, journal = {Biogeosciences}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {1726-4170}, doi = {10.5194/bg-14-5239-2017}, pages = {14}, year = {2017}, abstract = {The significance of biogenic silicon (BSi) pools as a key factor for the control of Si fluxes from terrestrial to aquatic ecosystems has been recognized for decades. However, while most research has been focused on phytogenic Si pools, knowledge of other BSi pools is still limited. We hypothesized that different BSi pools influence short-term changes in the water-soluble Si fraction in soils to different extents. To test our hypothesis we took plant (Calamagrostis epigejos, Phragmites australis) and soil samples in an artificial catchment in a post-mining landscape in the state of Brandenburg, Germany. We quantified phytogenic (phytoliths), protistic (diatom frustules and testate amoeba shells) and zoogenic (sponge spicules) Si pools as well as Tironextractable and water-soluble Si fractions in soils at the beginning (t(0)) and after 10 years (t(10)) of ecosystem development. As expected the results of Tiron extraction showed that there are no consistent changes in the amorphous Si pool at Chicken Creek (Huhnerwasser) as early as after 10 years. In contrast to t(0) we found increased water-soluble Si and BSi pools at t(10); thus we concluded that BSi pools are the main driver of short-term changes in water-soluble Si. However, because total BSi represents only small proportions of water-soluble Si at t(0) (< 2 \%) and t(10) (2.8-4.3 \%) we further concluded that smaller (< 5 mu m) and/or fragile phytogenic Si structures have the biggest impact on short-term changes in water-soluble Si. In this context, extracted phytoliths (> 5 mu m) only amounted to about 16\% of total Si con-tents of plant materials of C. epigejos and P. australis at t(10); thus about 84\% of small-scale and/or fragile phytogenic Si is not quantified by the used phytolith extraction method. Analyses of small-scale and fragile phytogenic Si structures are urgently needed in future work as they seem to represent the biggest and most reactive Si pool in soils. Thus they are the most important drivers of Si cycling in terrestrial biogeosystems.}, language = {en} } @article{ScharsichLohwasserSommeretal.2012, author = {Scharsich, Christina and Lohwasser, Ruth H. and Sommer, Michael and Asawapirom, Udom and Scherf, Ullrich and Thelakkat, Mukundan and Neher, Dieter and Koehler, Anna}, title = {Control of aggregate formation in poly(3-hexylthiophene) by solvent, molecular weight, and synthetic method}, series = {Journal of polymer science : B, Polymer physics}, volume = {50}, journal = {Journal of polymer science : B, Polymer physics}, number = {6}, publisher = {Wiley-Blackwell}, address = {Hoboken}, issn = {0887-6266}, doi = {10.1002/polb.23022}, pages = {442 -- 453}, year = {2012}, abstract = {Aggregate formation in poly(3-hexylthiophene) depends on molecular weight, solvent, and synthetic method. The interplay of these parameters thus largely controls device performance. In order to obtain a quantitative understanding on how these factors control the resulting electronic properties of P3HT, we measured absorption in solution and in thin films as well as the resulting field effect mobility in transistors. By a detailed analysis of the absorption spectra, we deduce the fraction of aggregates formed, the excitonic coupling within the aggregates, and the conjugation length within the aggregates, all as a function of solvent quality for molecular weights from 5 to 19 kDa. From this, we infer in which structure the aggregated chains pack. Although the 5 kDa samples form straight chains, the 11 and 19 kDa chains are kinked or folded, with conjugation lengths that increase as the solvent quality reduces. There is a maximum fraction of aggregated chains (about 55 +/- 5\%) that can be obtained, even for poor solvent quality. We show that inducing aggregation in solution leads to control of aggregate properties in thin films. As expected, the field-effect mobility correlates with the propensity to aggregation. Correspondingly, we find that a well-defined synthetic approach, tailored to give a narrow molecular weight distribution, is needed to obtain high field effect mobilities of up to 0.01 cm2/Vs for low molecular weight samples (=11 kDa), while the influence of synthetic method is negligible for samples of higher molecular weight, if low molecular weight fractions are removed by extraction.}, language = {en} } @article{WehrhanSommer2021, author = {Wehrhan, Marc and Sommer, Michael}, title = {A parsimonious approach to estimate soil organic carbon applying Unmanned Aerial System (UAS) multispectral imagery and the topographic position index in a heterogeneous soil landscape}, series = {Remote sensing / Molecular Diversity Preservation International (MDPI)}, volume = {13}, journal = {Remote sensing / Molecular Diversity Preservation International (MDPI)}, number = {18}, publisher = {MDPI}, address = {Basel}, issn = {2072-4292}, doi = {10.3390/rs13183557}, pages = {20}, year = {2021}, abstract = {Remote sensing plays an increasingly key role in the determination of soil organic carbon (SOC) stored in agriculturally managed topsoils at the regional and field scales. Contemporary Unmanned Aerial Systems (UAS) carrying low-cost and lightweight multispectral sensors provide high spatial resolution imagery (<10 cm). These capabilities allow integrate of UAS-derived soil data and maps into digitalized workflows for sustainable agriculture. However, the common situation of scarce soil data at field scale might be an obstacle for accurate digital soil mapping. In our case study we tested a fixed-wing UAS equipped with visible and near infrared (VIS-NIR) sensors to estimate topsoil SOC distribution at two fields under the constraint of limited sampling points, which were selected by pedological knowledge. They represent all releva nt soil types along an erosion-deposition gradient; hence, the full feature space in terms of topsoils' SOC status. We included the Topographic Position Index (TPI) as a co-variate for SOC prediction. Our study was performed in a soil landscape of hummocky ground moraines, which represent a significant of global arable land. Herein, small scale soil variability is mainly driven by tillage erosion which, in turn, is strongly dependent on topography. Relationships between SOC, TPI and spectral information were tested by Multiple Linear Regression (MLR) using: (i) single field data (local approach) and (ii) data from both fields (pooled approach). The highest prediction performance determined by a leave-one-out-cross-validation (LOOCV) was obtained for the models using the reflectance at 570 nm in conjunction with the TPI as explanatory variables for the local approach (coefficient of determination (R-2) = 0.91; root mean square error (RMSE) = 0.11\% and R-2 = 0.48; RMSE = 0.33, respectively). The local MLR models developed with both reflectance and TPI using values from all points showed high correlations and low prediction errors for SOC content (R-2 = 0.88, RMSE = 0.07\%; R-2 = 0.79, RMSE = 0.06\%, respectively). The comparison with an enlarged dataset consisting of all points from both fields (pooled approach) showed no improvement of the prediction accuracy but yielded decreased prediction errors. Lastly, the local MLR models were applied to the data of the respective other field to evaluate the cross-field prediction ability. The spatial SOC pattern generally remains unaffected on both fields; differences, however, occur concerning the predicted SOC level. Our results indicate a high potential of the combination of UAS-based remote sensing and environmental covariates, such as terrain attributes, for the prediction of topsoil SOC content at the field scale. The temporal flexibility of UAS offer the opportunity to optimize flight conditions including weather and soil surface status (plant cover or residuals, moisture and roughness) which, otherwise, might obscure the relationship between spectral data and SOC content. Pedologically targeted selection of soil samples for model development appears to be the key for an efficient and effective prediction even with a small dataset.}, language = {en} } @article{CalitriSommervanderMeijetal.2020, author = {Calitri, Francesca and Sommer, Michael and van der Meij, Marijn W. and Egli, Markus}, title = {Soil erosion along a transect in a forested catchment: recent or ancient processes?}, series = {Catena : an interdisciplinary journal of soil science, hydrology, geomorphology focusing on geoecology and landscape evolution}, volume = {194}, journal = {Catena : an interdisciplinary journal of soil science, hydrology, geomorphology focusing on geoecology and landscape evolution}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0341-8162}, doi = {10.1016/j.catena.2020.104683}, pages = {11}, year = {2020}, abstract = {Forested areas are assumed not to be influenced by erosion processes. However, forest soils of Northern Germany in a hummocky ground moraine landscape can sometimes exhibit a very shallow thickness on crest positions and buried soils on slope positions. The question consequently is: Are these on-going or ancient erosional and depositional processes? Plutonium isotopes act as soil erosion/deposition tracers for recent (last few decades) processes. Here, we quantified the 239+240PU inventories in a small, forested catchment (ancient forest "Melzower Forst", deciduous trees), which is characterised by a hummocky terrain including a kettle hole. Soil development depths (depth to C horizon) and 239+240PU inventories along a catena of sixteen different profiles were determined and correlated to relief parameters. Moreover, we compared different modelling approaches to derive erosion rates from Pu data.
We find a strong relationship between soil development depths, distance-to-sink and topography along the catena. Fully developed Retisols (thicknesses > 1 m) in the colluvium overlay old land surfaces as documented by fossil Ah horizons. However, we found no relationship of Pu-based erosion rates to any relief parameter. Instead, 239+240PU inventories showed a very high local, spatial variability (36-70 Bq m(-2)). Low annual rainfall, spatially distributed interception and stem flow might explain the high variability of the 239+240PU inventories, giving rise to a patchy input pattern. Different models resulted in quite similar erosion and deposition rates (max: -5 t ha(-1) yr(-1) to +7.3 t ha(-1) yr(-1)). Although some rates are rather high, the magnitude of soil erosion and deposition - in terms of soil thickness change - is negligible during the last 55 years. The partially high values are an effect of the patchy Pu deposition on the forest floor. This forest has been protected for at least 240 years. Therefore rather natural events and anthropogenic activities during medieval times or even earlier must have caused the observed soil pattern, which documents strong erosion and deposition processes.}, language = {en} } @article{VaidyaSchmidtRakowskietal.2021, author = {Vaidya, Shrijana and Schmidt, Marten and Rakowski, Peter and Bonk, Norbert and Verch, Gernot and Augustin, J{\"u}rgen and Sommer, Michael and Hoffmann, Mathias}, title = {A novel robotic chamber system allowing to accurately and precisely determining spatio-temporal CO2 flux dynamics of heterogeneous croplands}, series = {Agricultural and forest meteorology}, volume = {296}, journal = {Agricultural and forest meteorology}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0168-1923}, doi = {10.1016/j.agrformet.2020.108206}, pages = {9}, year = {2021}, abstract = {The precise and accurate assessment of carbon dioxide (CO2) exchange is crucial to identify terrestrial carbon (C) sources and sinks and for evaluating their role within the global C budget. The substantial uncertainty in disentangling the management and soil impact on measured CO2 fluxes are largely ignored especially in cropland. The reasons for this lies in the limitation of the widely used eddy covariance as well as manual and automatic chamber systems, which either account for short-term temporal variability or small-scale spatial heterogeneity, but barely both. To address this issue, we developed a novel robotic chamber system allowing for dozens of spatial measurement repetitions, thus enabling CO2 exchange measurements in a sufficient temporal and high small-scale spatial resolution. The system was tested from 08th July to 09th September 2019 at a heterogeneous field (100 m x 16 m), located within the hummocky ground moraine landscape of northeastern Germany (CarboZALF-D). The field is foreseen for a longer-term block trial manipulation experiment extending over three erosion induced soil types and was covered with spring barley. Measured fluxes of nighttime ecosystem respiration (R-eco) and daytime net ecosystem exchange (NEE) showed distinct temporal patterns influenced by crop phenology, weather conditions and management practices. Similarly, we found clear small-scale spatial differences in cumulated (gap-filled) R-eco, gross primary productivity (GPP) and NEE fluxes affected by the three distinct soil types. Additionally, spatial patterns induced by former management practices and characterized by differences in soil pH and nutrition status (P and K) were also revealed between plots within each of the three soil types, which allowed compensating for prior to the foreseen block trial manipulation experiment. The results underline the great potential of the novel robotic chamber system, which not only detects short-term temporal CO2 flux dynamics but also reflects the impact of small-scale spatial heterogeneity.}, language = {en} } @article{PuppeLeueSommeretal.2022, author = {Puppe, Daniel and Leue, Martin and Sommer, Michael and Schaller, J{\"o}rg and Kaczorek, Danuta}, title = {Auto-fluorescence in phytoliths}, series = {Frontiers in Environmental Science}, volume = {10}, journal = {Frontiers in Environmental Science}, publisher = {Frontiers Media}, address = {Lausanne}, issn = {2296-665X}, doi = {10.3389/fenvs.2022.915947}, pages = {14}, year = {2022}, abstract = {The detection of auto-fluorescence in phytogenic, hydrated amorphous silica depositions (phytoliths) has been found to be a promising approach to verify if phytoliths were burnt or not, especially in archaeological contexts. However, it is unknown so far at what temperature and how auto-fluorescence is induced in phytoliths. We used fluorescence microscopy, scanning electron microscope-energy dispersive X-ray spectroscopy (SEM-EDX), and Fourier transform infrared spectroscopy to analyze auto-fluorescence in modern phytoliths extracted from plant samples or in intact leaves of winter wheat. Leaves and extracted phytoliths were heated at different temperatures up to 600 degrees C. The aims of our experiments were i) to find out what temperature is needed to induce auto-fluorescence in phytoliths, ii) to detect temperature-dependent changes in the molecular structure of phytoliths related to auto-fluorescence, and iii) to derive a mechanistic understanding of auto-fluorescence in phytoliths. We found organic compounds associated with phytoliths to cause auto-fluorescence in phytoliths treated at temperatures below approx. 400 degrees C. In phytoliths treated at higher temperatures, i.e., 450 and 600 degrees C, phytolith auto-fluorescence was mainly caused by molecular changes of phytolith silica. Based on our results we propose that auto-fluorescence in phytoliths is caused by clusterization-triggered emissions, which are caused by overlapping electron clouds forming non-conventional chromophores. In phytoliths heated at temperatures above about 400 degrees C dihydroxylation and the formation of siloxanes result in oxygen clusters that serve as non-conventional chromophores in fluorescence events. Furthermore, SEM-EDX analyses revealed that extractable phytoliths were dominated by lumen phytoliths (62\%) compared to cell wall phytoliths (38\%). Our findings might be not only relevant in archaeological phytolith-based examinations, but also for studies on the temperature-dependent release of silicon from phytoliths and the potential of long-term carbon sequestration in phytoliths.}, language = {en} } @article{PremkeAttermeyerAugustinetal.2016, author = {Premke, Katrin and Attermeyer, Katrin and Augustin, J{\"u}rgen and Cabezas, Alvaro and Casper, Peter and Deumlich, Detlef and Gelbrecht, J{\"o}rg and Gerke, Horst H. and Gessler, Arthur and Großart, Hans-Peter and Hilt, Sabine and Hupfer, Michael and Kalettka, Thomas and Kayler, Zachary and Lischeid, Gunnar and Sommer, Michael and Zak, Dominik}, title = {The importance of landscape diversity for carbon fluxes at the landscape level: small-scale heterogeneity matters}, series = {Wiley Interdisciplinary Reviews : Water}, volume = {3}, journal = {Wiley Interdisciplinary Reviews : Water}, publisher = {Wiley}, address = {Hoboken}, issn = {2049-1948}, doi = {10.1002/wat2.1147}, pages = {601 -- 617}, year = {2016}, abstract = {Landscapes can be viewed as spatially heterogeneous areas encompassing terrestrial and aquatic domains. To date, most landscape carbon (C) fluxes have been estimated by accounting for terrestrial ecosystems, while aquatic ecosystems have been largely neglected. However, a robust assessment of C fluxes on the landscape scale requires the estimation of fluxes within and between both landscape components. Here, we compiled data from the literature on C fluxes across the air-water interface from various landscape components. We simulated C emissions and uptake for five different scenarios which represent a gradient of increasing spatial heterogeneity within a temperate young moraine landscape: (I) a homogeneous landscape with only cropland and large lakes; (II) separation of the terrestrial domain into cropland and forest; (III) further separation into cropland, forest, and grassland; (IV) additional division of the aquatic area into large lakes and peatlands; and (V) further separation of the aquatic area into large lakes, peatlands, running waters, and small water bodies These simulations suggest that C fluxes at the landscape scale might depend on spatial heterogeneity and landscape diversity, among other factors. When we consider spatial heterogeneity and diversity alone, small inland waters appear to play a pivotal and previously underestimated role in landscape greenhouse gas emissions that may be regarded as C hot spots. Approaches focusing on the landscape scale will also enable improved projections of ecosystems' responses to perturbations, e.g., due to global change and anthropogenic activities, and evaluations of the specific role individual landscape components play in regional C fluxes. WIREs Water 2016, 3:601-617. doi: 10.1002/wat2.1147}, language = {en} } @article{CalitriSommerNortonetal.2019, author = {Calitri, Francesca and Sommer, Michael and Norton, Kevin and Temme, Arnaud and Brandova, Dagmar and Portes, Raquel and Christl, Marcus and Ketterer, Mike E. and Egli, Markus}, title = {Tracing the temporal evolution of soil redistribution rates in an agricultural landscape using Pu239+240 and Be-10}, series = {Earth surface processes and landforms : the journal of the British Geomorphological Research Group}, volume = {44}, journal = {Earth surface processes and landforms : the journal of the British Geomorphological Research Group}, number = {9}, publisher = {Wiley}, address = {Hoboken}, issn = {0197-9337}, doi = {10.1002/esp.4612}, pages = {1783 -- 1798}, year = {2019}, abstract = {Two principal groups of processes shape mass fluxes from and into a soil: vertical profile development and lateral soil redistribution. Periods having predominantly progressive soil forming processes (soil profile development) alternate with periods having predominantly regressive processes (erosion). As a result, short-term soil redistribution - years to decades - can differ substantially from long-term soil redistribution; i.e. centuries to millennia. However, the quantification of these processes is difficult and consequently their rates are poorly understood. To assess the competing roles of erosion and deposition we determined short- and long-term soil redistribution rates in a formerly glaciated area of the Uckermark, northeast Germany. We compared short-term erosion or accumulation rates using plutonium-239 and -240 (239+240Pu) and long-term rates using both in situ and meteoric cosmogenic beryllium-10 (10Be). Three characteristic process domains have been analysed in detail: a flat landscape position having no erosion/deposition, an erosion-dominated mid-slope, and a deposition-dominated lower-slope site. We show that the short-term mass erosion and accumulation rates are about one order of magnitude higher than long-term redistribution rates. Both, in situ and meteoric 10Be provide comparable results. Depth functions, and therefore not only an average value of the topsoil, give the most meaningful rates. The long-term soil redistribution rates were in the range of -2.1 t ha-1 yr-1 (erosion) and +0.26 t ha-1 yr-1 (accumulation) whereas the short-term erosion rates indicated strong erosion of up to 25 t ha-1 yr-1 and accumulation of 7.6 t ha-1 yr-1. Our multi-isotope method identifies periods of erosion and deposition, confirming the 'time-split approach' of distinct different phases (progressive/regressive) in soil evolution. With such an approach, temporally-changing processes can be disentangled, which allows the identification of both the dimensions of and the increase in soil erosion due to human influence}, language = {en} } @article{WehrhanPuppeKaczoreketal.2021, author = {Wehrhan, Marc and Puppe, Daniel and Kaczorek, Danuta and Sommer, Michael}, title = {Spatial patterns of aboveground phytogenic Si stocks in a grass-dominated catchment}, series = {Biogeosciences : BG}, volume = {18}, journal = {Biogeosciences : BG}, number = {18}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {1726-4170}, doi = {10.5194/bg-18-5163-2021}, pages = {5163 -- 5183}, year = {2021}, abstract = {Various studies have been performed to quantify silicon (Si) stocks in plant biomass and related Si fluxes in terrestrial biogeosystems. Most studies are deliberately designed on the plot scale to ensure low heterogeneity in soils and plant composition, hence similar environmental conditions. Due to the immanent spatial soil variability, the transferability of results to larger areas, such as catchments, is therefore limited. However, the emergence of new technical features and increasing knowledge on details in Si cycling lead to a more complex picture at landscape and catchment scales. Dynamic and static soil properties change along the soil continuum and might influence not only the species composition of natural vegetation but also its biomass distribution and related Si stocks. Maximum likelihood (ML) classification was applied to multispectral imagery captured by an unmanned aerial system (UAS) aiming at the identification of land cover classes (LCCs). Subsequently, the normalized difference vegetation index (NDVI) and ground-based measurements of biomass were used to quantify aboveground Si stocks in two Si-accumulating plants (Calamagrostis epige-jos and Phragmites australis) in a heterogeneous catchment and related corresponding spatial patterns of these stocks to soil properties. We found aboveground Si stocks of C. epige-jos and P. australis to be surprisingly high (maxima of Si stocks reach values up to 98 g Sim(-2)), i.e. comparable to or markedly exceeding reported values for the Si storage in aboveground vegetation of various terrestrial ecosystems. We further found spatial patterns of plant aboveground Si stocks to reflect spatial heterogeneities in soil properties. From our results, we concluded that (i) aboveground biomass of plants seems to be the main factor of corresponding phytogenic Si stock quantities, and (ii) a detection of biomass heterogeneities via UAS-based remote sensing represents a promising tool for the quantification of lifelike phytogenic Si pools at landscape scales.}, language = {en} } @article{FunkLiHoffmannetal.2012, author = {Funk, Roger and Li, Yong and Hoffmann, Carsten and Reiche, Matthias and Zhang, Zhuodong and Li, Junjie and Sommer, Michael}, title = {Using Cs-137 to estimate wind erosion and dust deposition on grassland in Inner Mongolia-selection of a reference site and description of the temporal variability}, series = {Plant and soil}, volume = {351}, journal = {Plant and soil}, number = {1-2}, publisher = {Springer}, address = {Dordrecht}, issn = {0032-079X}, doi = {10.1007/s11104-011-0964-y}, pages = {293 -- 307}, year = {2012}, abstract = {The aims of this study were to identify areas of wind erosion and dust deposition and to quantify the effects of different grazing intensities on soil redistribution rates in grasslands based on the Cs-137 technique. Because the method uses a reference inventory as threshold for erosion or deposition, the classification of any other site as source or sink for dust depends on the accurate selection of this reference site. Measurements of Cs-137 inventories and depth distributions were carried out at pasture sites with predominant species of Stipa grandis and Leymus chinensis which are grazed with different intensities. Additional measurements were made at arable land, plant-covered sand dunes and alluvial plains. Wind-induced soil erosion and dust deposition rates were calculated from Cs-137 inventories by means of the "Profile-Distribution" and the "Mass Balance II" models. The selection of the reference site was based on fluid dynamical and process-determining parameters. The chosen site should meet the following four conditions: (i) located at a summit position with obviously low deposition rates, (ii) sufficient vegetation cover to prevent wind erosion, (iii) plane to exclude water erosion and (iv) in the wind/dust shadow of a higher elevation. The measured reference inventory of Cs-137 was 1967(+/- 102) Bqm(-2) located at a summit position of moderately grazed Leymus chinensis steppe. The Cs-137 inventories at other sites ranged from 1330 Bqm(-2) at heavily grazed sites to 5119 Bqm(-2) at river deposits, representing annual average soil losses of up to 130 tkm(-2) and deposits of up to 540 tkm(-2), respectively. The calculated annual averages of dust depositions at ungrazed Leymus chinensis sites were related to the dust storm frequencies of the last 50 years resulting in a description of the temporal variability of annual dust depositions from about 154 tkm(-2) in the 1960s to 26 tkm(-2) at recent times. Based on this quantification already 80\% of the total dust depositions can be related to the 20 years between the 1960s and the end of the 1970s and only 20\% to the time between 1980 and 2001. Cs-137 technique is a promising method to assess the effect of grazing intensity and land use types on the spatial variability of wind-induced soil and dust redistribution processes in semi-arid grasslands. However, considerable efforts are needed to identify a reliable reference site, because erosion and deposition induced by wind may occur at the same places. The combination of the dust deposition rates derived from Cs-137 profile data with the dust storm frequencies is helpful for a better reconstruction of the temporal variability of dust deposition and wind erosion in this region. The calculated recent deposition rates of about 20 tkm(-2) are in good agreement with data of other authors.}, language = {en} } @article{ReicheFunkZhangetal.2012, author = {Reiche, Matthias and Funk, Roger and Zhang, Zhuodong and Hoffmann, Carsten and Reiche, Johannes and Wehrhan, Marc and Li, Yong and Sommer, Michael}, title = {Application of satellite remote sensing for mapping wind erosion risk and dust emission-deposition in Inner Mongolia grassland, China}, series = {Grassland science}, volume = {58}, journal = {Grassland science}, number = {1}, publisher = {Wiley-Blackwell}, address = {Malden}, issn = {1744-6961}, doi = {10.1111/j.1744-697X.2011.00235.x}, pages = {8 -- 19}, year = {2012}, abstract = {Intensive grazing leads to land degradation and desertification of grassland ecosystems followed by serious environmental and social problems. The Xilingol steppe grassland in Inner Mongolia, China, which has been a sink area for dust for centuries, is strongly affected by the negative effects of overgrazing and wind erosion. The aim of this study is the provision of a wind erosion risk map with a spatial high resolution of 25 m to identify actual source and sink areas. In an integrative approach, field measurements of vegetation features and surface roughness length z0 were combined with Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) image data for a land use classification. To determine the characteristics of the different land use classes, a field observation (ground truth) was performed in April 2009. The correlation of vegetation height and z0 (R2 = 0.8, n = 55) provided the basis for a separation of three main classes, grassland, non-vegetation and other. The integration of the soil-adjusted vegetation index (SAVI) and the spectral information from the atmospheric corrected ASTER bands 1, 2 and 3 (visible to near-infrared) led to a classification of the overall accuracy (OA) of 0.79 with a kappa () statistic of 0.74, respectively. Additionally, a digital elevation model (DEM) was used to identify topographical effects in relation to the main wind direction, which enabled a qualitative estimation of potential dust deposition areas. The generated maps result in a significantly higher description of the spatial variability in the Xilingol steppe grassland reflecting the different land use intensities on the current state of the grassland less, moderately and highly degraded. The wind erosion risk map enables the identification of characteristic mineral dust sources, sinks and transition zones.}, language = {en} } @article{ZhangWielandReicheetal.2012, author = {Zhang, Zhuodong and Wieland, Ralf and Reiche, Matthias and Funk, Roger and Hoffmann, Carsten and Li, Yong and Sommer, Michael}, title = {Identifying sensitive areas to wind erosion in the xilingele grassland by computational fluid dynamics modelling}, series = {Ecological informatics : an international journal on ecoinformatics and computational ecolog}, volume = {8}, journal = {Ecological informatics : an international journal on ecoinformatics and computational ecolog}, number = {5}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1574-9541}, doi = {10.1016/j.ecoinf.2011.12.002}, pages = {37 -- 47}, year = {2012}, abstract = {In order to identify the areas in the Xilingele grassland which are sensitive to wind erosion, a computational fluid dynamics model (CFD-WEM) was used to simulate the wind fields over a region of 37 km(2) which contains different topography and land use types. Previous studies revealed the important influences of topography and land use on wind erosion in the Xilingele grassland. Topography influences wind fields at large scale, and land use influences wind fields near the ground. Two steps were designed to implement the CFD wind simulation, and they were respectively to simulate the influence of topography and surface roughness on the wind. Digital elevation model (DEM) and surface roughness length were the key inputs for the CFD simulation. The wind simulation by CFD-WEM was validated by a wind data set which was measured simultaneously at six positions in the field. Three scenarios with different wind velocities were designed based on observed dust storm events, and wind fields were simulated according to these scenarios to predict the sensitive areas to wind erosion. General assumptions that cropland is the most sensitive area to wind erosion and heavily and moderately grazed grasslands are both sensitive etc. can be refined by the modelling of CFD-WEM. Aided by the results of this study, the land use planning and protection measures against wind erosion can be more efficient. Based on the case study in the Xilingele grassland, a method of regional wind erosion assessment aided by CFD wind simulation is summarized. The essence of this method is a combination of CFD wind simulation and determination of threshold wind velocity for wind erosion. Because of the physically-based simulation and the flexibility of the method, it can be generalised to other regions.}, language = {en} } @article{ZhangWielandReicheetal.2012, author = {Zhang, Zhuo-dong and Wieland, Ralf and Reiche, Matthias and Funk, Roger and Hoffmann, Carsten and Li, Yong and Sommer, Michael}, title = {A computational fluid dynamics model for wind simulation: model implementation and experimental validation}, series = {Journal of Zhejiang University : an international journal ; Science A, Applied physics \& engineering : an international applied physics \& engineering journal}, volume = {13}, journal = {Journal of Zhejiang University : an international journal ; Science A, Applied physics \& engineering : an international applied physics \& engineering journal}, number = {4}, publisher = {Zhejiang University Press}, address = {Hangzou}, issn = {1673-565X}, doi = {10.1631/jzus.A1100231}, pages = {274 -- 283}, year = {2012}, abstract = {To provide physically based wind modelling for wind erosion research at regional scale, a 3D computational fluid dynamics (CFD) wind model was developed. The model was programmed in C language based on the Navier-Stokes equations, and it is freely available as open source. Integrated with the spatial analysis and modelling tool (SAMT), the wind model has convenient input preparation and powerful output visualization. To validate the wind model, a series of experiments was conducted in a wind tunnel. A blocking inflow experiment was designed to test the performance of the model on simulation of basic fluid processes. A round obstacle experiment was designed to check if the model could simulate the influences of the obstacle on wind field. Results show that measured and simulated wind fields have high correlations, and the wind model can simulate both the basic processes of the wind and the influences of the obstacle on the wind field. These results show the high reliability of the wind model. A digital elevation model (DEM) of an area (3800 m long and 1700 m wide) in the Xilingele grassland in Inner Mongolia (autonomous region, China) was applied to the model, and a 3D wind field has been successfully generated. The clear implementation of the model and the adequate validation by wind tunnel experiments laid a solid foundation for the prediction and assessment of wind erosion at regional scale.}, language = {en} } @article{ZhangWielandReicheetal.2011, author = {Zhang, Zhuodong and Wieland, Ralf and Reiche, Matthias and Funk, Roger and Hoffmann, Carsten and Li, Yong and Sommer, Michael}, title = {Wind modelling for wind erosion research by open source computational fluid dynamics}, series = {Ecological informatics : an international journal on ecoinformatics and computational ecolog}, volume = {6}, journal = {Ecological informatics : an international journal on ecoinformatics and computational ecolog}, number = {5}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1574-9541}, doi = {10.1016/j.ecoinf.2011.02.001}, pages = {316 -- 324}, year = {2011}, abstract = {The open source computational fluid dynamics (CFD) wind model (CFD-WEM) for wind erosion research in the Xilingele grassland in Inner Mongolia (autonomous region, China) is compared with two open source CFD models Gerris and OpenFOAM. The evaluation of these models was made according to software technology, implemented methods, handling, accuracy and calculation speed. All models were applied to the same wind tunnel data set. Results show that the simplest CFD-WEM has the highest calculation speed with acceptable accuracy, and the most powerful OpenFOAM produces the simulation with highest accuracy and the lowest calculation speed. Gerris is between CFD-WEM and OpenFOAM. It calculates faster than OpenFOAM, and it is capable to solve different CFD problems. CFD-WEM is the optimal model to be further developed for wind erosion research in Inner Mongolia grassland considering its efficiency and the uncertainties of other input data. However, for other applications using CFD technology, Gerris and OpenFOAM can be good choices. This paper shows the powerful capability of open source CFD software in wind erosion study, and advocates more involvement of open source technology in wind erosion and related ecological researches.}, language = {en} } @article{WannerElmerSommeretal.2015, author = {Wanner, Manfred and Elmer, Michael and Sommer, Michael and Funk, Roger and Puppe, Daniel}, title = {Testate amoebae colonizing a newly exposed land surface are of airborne origin}, series = {Ecological indicators : integrating monitoring, assessment and management}, volume = {48}, journal = {Ecological indicators : integrating monitoring, assessment and management}, publisher = {Elsevier}, address = {Amsterdam}, issn = {1470-160X}, doi = {10.1016/j.ecolind.2014.07.037}, pages = {55 -- 62}, year = {2015}, abstract = {We hypothesized that at the very beginning of terrestrial ecosystem development, airborne testate amoebae play a pivotal role in facilitating organismic colonization and related soil processes. We, therefore, analyzed size and quantity of airborne testate amoebae and immigration and colonization success of airborne testate amoebae on a new land surface (experimental site "Chicken Creek", artificial post-mining water catchment). Within an altogether 91-day exposure of 70 adhesive traps, 12 species of testate amoebae were identified to be of airborne origin. Phryganella acropodia (51\% of all individuals found, diameter about 35-45 mu m) and Centropyxis sphagnicola (23\% of all individuals found, longest axis about 55-68 mu m), occurred most frequently in the adhesive traps. We extrapolated an aerial amoeba deposition of 61 individuals d(-1) m(-2) (living and dead individuals combined). Although it would be necessary to have a longer sequence (some additional years), our analysis of the "target substrate" of aerial immigration (catchment site) may point to a shift from a stochastic (variable) beginning of community assembly to a more deterministic (stable) course. This shift was assigned to an age of seven years of initial soil development. Although experienced specialists are necessary to conduct these time-consuming studies, the presented data suggest that terrestrial amoebae are suitable indicators for initial ecosystem development and utilization.}, language = {en} } @article{LischeidWebberSommeretal.2022, author = {Lischeid, Gunnar and Webber, Heidi and Sommer, Michael and Nendel, Claas and Ewert, Frank}, title = {Machine learning in crop yield modelling}, series = {Agricultural and forest meteorology}, volume = {312}, journal = {Agricultural and forest meteorology}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0168-1923}, doi = {10.1016/j.agrformet.2021.108698}, pages = {23}, year = {2022}, abstract = {Provisioning a sufficient stable source of food requires sound knowledge about current and upcoming threats to agricultural production. To that end machine learning approaches were used to identify the prevailing climatic and soil hydrological drivers of spatial and temporal yield variability of four crops, comprising 40 years yield data each from 351 counties in Germany. Effects of progress in agricultural management and breeding were subtracted from the data prior the machine learning modelling by fitting smooth non-linear trends to the 95th percentiles of observed yield data. An extensive feature selection approach was followed then to identify the most relevant predictors out of a large set of candidate predictors, comprising various soil and meteorological data. Particular emphasis was placed on studying the uniqueness of identified key predictors. Random Forest and Support Vector Machine models yielded similar although not identical results, capturing between 50\% and 70\% of the spatial and temporal variance of silage maize, winter barley, winter rapeseed and winter wheat yield. Equally good performance could be achieved with different sets of predictors. Thus identification of the most reliable models could not be based on the outcome of the model study only but required expert's judgement. Relationships between drivers and response often exhibited optimum curves, especially for summer air temperature and precipitation. In contrast, soil moisture clearly proved less relevant compared to meteorological drivers. In view of the expected climate change both excess precipitation and the excess heat effect deserve more attention in breeding as well as in crop modelling.}, language = {en} } @article{SiegmundFunkSommeretal.2022, author = {Siegmund, Nicole and Funk, Roger and Sommer, Michael and Avecilla, Fernando and Esteban Panebianco, Juan and Iturri, Laura Antonela and Buschiazzo, Daniel}, title = {Horizontal and vertical fluxes of particulate matter during wind erosion on arable land in the province La Pampa, Argentina}, series = {International journal of sediment research}, volume = {37}, journal = {International journal of sediment research}, number = {5}, publisher = {IRTCES}, address = {Beijing}, issn = {1001-6279}, doi = {10.1016/j.ijsrc.2022.01.004}, pages = {539 -- 552}, year = {2022}, abstract = {A detailed analysis of horizontal and vertical particulate matter (PM) fluxes during wind erosion has been done, based on measurements of PM smaller than 10, 2.5, and 1.0 mu mm, at windward and leeward positions on a measuring field. The three fractions of PM measurement are differently influenced by the increasing wind and shear velocities of the wind. The measured concentrations of the coarser fractions of the fine dust, PM10, and PM2.5, increase with wind and shear velocity, whereas the PM1.0 concentrations show no clear correlation to the shear velocity. The share of PM2.5 on PM10 depends on the measurement height and wind speed and varies between 4 and 12 m/s at the 1 m height ranging from 25\% to 7\% (average 10\%), and at the 4 m height from 39\% to 23\% (average 30\%). Although general relationships between wind speed, PM concentration, and horizontal and vertical fluxes could be found, the contribution of the measuring field was very low, as balances of incoming and outgoing fluxes show. Consequently, the measured PM concentrations are determined from a variety of sources, such as traffic on unpaved roads, cattle drives, tillage operations, and wind erosion, and thus, represent all components of land use and landscape structure in the near and far surroundings of the measuring field. The current results may reflect factors from the landscape scale rather than the influence of field-related variables. The measuring devices used to monitor PM concentrations showed differences of up to 20\%, which led to considerable deviations when determining total balances. Differences up to 67\% between the calculated fluxes prove the necessity of a previous calibration of the devices used. (c) 2022 International Research and Training Centre on Erosion and Sedimentation/the World Association for Sedimentation and Erosion Research.}, language = {en} } @article{SiegmundPanebiancoAvecillaetal.2022, author = {Siegmund, Nicole and Panebianco, Juan E. and Avecilla, Fernando and Iturri, Laura Antonela and Sommer, Michael and Buschiazzo, Daniel and Funk, Roger}, title = {From gustiness to dustiness}, series = {Atmosphere}, volume = {13}, journal = {Atmosphere}, number = {8}, publisher = {MDPI}, address = {Basel}, issn = {2073-4433}, doi = {10.3390/atmos13081173}, pages = {14}, year = {2022}, abstract = {This study delivers the first empirical data-driven analysis of the impact of turbulence induced gustiness on the fine dust emissions from a measuring field. For quantification of the gust impact, a new measure, the Gust uptake Efficiency (GuE) is introduced. GuE provides a percentage of over- or under-proportional dust uptake due to gust activity during a wind event. For the three analyzed wind events, GuE values of up to 150\% could be found, yet they significantly differed per particle size class with a tendency for lower values for smaller particles. In addition, a high-resolution correlation analysis among 31 particle size classes and wind speed was conducted; it revealed strong negative correlation coefficients for very small particles and positive correlations for bigger particles, where 5 mu m appears to be an empirical threshold dividing both directions. We conclude with a number of suggestions for further investigations: an optimized field experiment setup, a new particle size ratio (PM1/PM0.5 in addition to PM10/PM2.5), as well as a comprehensive data-driven search for an optimal wind gust definition in terms of soil erosivity.}, language = {en} } @article{SiegmundFunkKoszinskyetal.2018, author = {Siegmund, Nicole and Funk, Roger and Koszinsky, Sylvia and Buschiazzo, Daniel and Sommer, Michael}, title = {Effects of low-scale landscape structures on aeolian transport processes on arable land}, series = {Aeolian Research}, volume = {32}, journal = {Aeolian Research}, publisher = {Elsevier}, address = {Oxford}, issn = {1875-9637}, doi = {10.1016/j.aeolia.2018.03.003}, pages = {181 -- 191}, year = {2018}, abstract = {The landscape of the semiarid Pampa in central Argentina is characterized by late Pleistocene aeolian deposits, covering large plains with sporadic dune structures. Since the current land use changed from extensive livestock production within the Caldenal forest ecosystem to arable land, the wind erosion risk increased distinctly. We measured wind erosion and deposition patterns at the plot scale and investigated the spatial variability of the erosion processes. The wind-induced mass-transport was measured with 18 Modified Wilson and Cooke samplers (MWAC), installed on a 1.44 ha large field in a 20 x 40 m grid. Physical and chemical soil properties from the upper soil as well as a digital elevation model were recorded in a 20 x 20 m grid. In a 5-month measuring campaign data from seven storms with three different wind directions was obtained. Results show very heterogeneous patterns of erosion and deposition for each storm and indicate favoured erosion on windward and deposits on leeward terrain positions. Furthermore, a multiple regression model was build, explaining up to 70\% of the spatial variance of erosion by just using four predictors: topsoil thickness, relative elevation, soil organic carbon content and slope direction. Our findings suggest a structure-process-structure complex where the landscape structure determines the effects of recent wind erosion processes which again slowly influence the structure, leading to a gradual increase of soil heterogeneity.}, language = {en} } @article{IturriFunkSommeretal.2022, author = {Iturri, Laura Antonela and Funk, Roger and Sommer, Michael and Buschiazzo, Daniel}, title = {Transport preferences of P forms in wind-blown sediments of two susceptible soils}, series = {Aeolian research : an international journal on wind erosion research / International Society of Aeolian Research}, volume = {55}, journal = {Aeolian research : an international journal on wind erosion research / International Society of Aeolian Research}, publisher = {Elsevier}, address = {Amsterdam [u.a.]}, issn = {1875-9637}, doi = {10.1016/j.aeolia.2022.100776}, pages = {9}, year = {2022}, abstract = {Wind erosion of agricultural soils affects their stock of essential elements for plants, like phosphorus (P). It is known that the composition of the eroded sediments varies with height, according to the size and density of the transported substances. Aim of this study was to analyze the concentration and enrichment ratios of P forms in sediments transported by the wind. A wind-tunnel study was performed on a sandy-and a sandy loam soil in order to measure P forms concentrations in the saltating sediments. P concentrations were also measured in the particulate matter (PM) of each soil, gained with the Easy Dust Generator. In both soils, inorganic-(Pi) and organic P (Po) were preferentially transported in PM, with enrichment ratios of 1.8 and 5.5, respectively. Nevertheless, a Pi/Po of 0.9 indicated that the accumulation of the minor Po in PM was more pronounced than Pi. This agrees with P-rich light and easily erodible organic compounds, almost exclusively accumulated in PM, and in relatively heavy and less erodible minerals, like apatites, in lower height sediments. Labile P (Pl) was preferentially transported in saltating sediments of both soils. This was attributed to the selective Bray \& Kurtz I's extraction of the abundant inorganic P forms of these sediments. Total P (Pt) copied the transport trends of Pi, the major form. According to the transporting trends, Pi and Po would be re-sedimented at longer distances from the source than Pl. Outcomes become useful for modeling the influence of wind erosion on P cycling.}, language = {en} } @article{SchallerPuppeKaczoreketal.2021, author = {Schaller, J{\"o}rg and Puppe, Daniel and Kaczorek, Danuta and Ellerbrock, Ruth and Sommer, Michael}, title = {Silicon cycling in soils revisited}, series = {Plants : open access journal}, volume = {10}, journal = {Plants : open access journal}, number = {2}, publisher = {MDPI}, address = {Basel}, issn = {2223-7747}, doi = {10.3390/plants10020295}, pages = {33}, year = {2021}, abstract = {Silicon (Si) speciation and availability in soils is highly important for ecosystem functioning, because Si is a beneficial element for plant growth. Si chemistry is highly complex compared to other elements in soils, because Si reaction rates are relatively slow and dependent on Si species. Consequently, we review the occurrence of different Si species in soil solution and their changes by polymerization, depolymerization, and condensation in relation to important soil processes. We show that an argumentation based on thermodynamic endmembers of Si dependent processes, as currently done, is often difficult, because some reactions such as mineral crystallization require months to years (sometimes even centuries or millennia). Furthermore, we give an overview of Si reactions in soil solution and the predominance of certain solid compounds, which is a neglected but important parameter controlling the availability, reactivity, and function of Si in soils. We further discuss the drivers of soil Si cycling and how humans interfere with these processes. The soil Si cycle is of major importance for ecosystem functioning; therefore, a deeper understanding of drivers of Si cycling (e.g., predominant speciation), human disturbances and the implication for important soil properties (water storage, nutrient availability, and micro aggregate stability) is of fundamental relevance.}, language = {en} } @article{PuppeKaczorekSchalleretal.2021, author = {Puppe, Daniel and Kaczorek, Danuta and Schaller, J{\"o}rg and Barkusky, Dietmar and Sommer, Michael}, title = {Crop straw recycling prevents anthropogenic desilication of agricultural soil-plant systems in the temperate zone}, series = {Geoderma : an international journal of soil science}, volume = {403}, journal = {Geoderma : an international journal of soil science}, publisher = {Elsevier}, address = {Amsterdam}, issn = {0016-7061}, doi = {10.1016/j.geoderma.2021.115187}, pages = {13}, year = {2021}, abstract = {Due to the fact that silicon (Si) increases the resistance of plants against diverse abiotic and biotic stresses, Si nowadays is categorized as beneficial substance for plants. However, humans directly influence Si cycling on a global scale. Intensified agriculture and corresponding harvest-related Si exports lead to Si losses in agricultural soils. This anthropogenic desilication might be a big challenge for modern agriculture. However, there is still only little knowledge about Si cycling in agricultural systems of the temperate zone, because most studies focus on rice and sugarcane production in (sub)tropical areas. Furthermore, many studies are performed for a short term only, and thus do not provide the opportunity to analyze slow changes in soil-plant systems (e.g., desilication) over long periods. We analyzed soil and plant samples from an ongoing long-term field experiment (established 1963) in the temperate zone (NE Germany) to evaluate the effects of different nitrogen-phosphoruspotassium (NPK) fertilization rates and crop straw recycling (i.e., straw incorporation) on anthropogenic desilication in the long term. Our results clearly show that crop straw recycling not only prevents anthropogenic desilication (about 43-60\% of Si exports can be saved by crop straw recycling in the long term), but also replenishes plant available Si stocks of agricultural soil-plant systems. Furthermore, we found that a reduction of N fertilization rates of about 69\% is possible without considerable biomass losses. This economy of the need for N fertilizers potentially can be combined with the benefits of crop straw recycling, i.e., enhancement of carbon sequestration via straw inputs and prevention of anthropogenic desilication of agricultural soil-plant systems. Thus crop straw recycling might have the potential to act as key management practice in sustainable, low fertilization agriculture in the temperate zone in the future.}, language = {en} } @article{SommerJochheimHoehnetal.2013, author = {Sommer, Michael and Jochheim, H. and H{\"o}hn, Axel and Breuer, J{\"o}rn and Zagorski, Z. and Busse, J. and Barkusky, Dietmar and Meier, K. and Puppe, D. and Wanner, Manfred and Kaczorek, Danuta}, title = {Si cycling in a forest biogeosystem - the importance of transient state biogenic Si pools}, series = {Biogeosciences}, volume = {10}, journal = {Biogeosciences}, number = {7}, publisher = {Copernicus}, address = {G{\"o}ttingen}, issn = {1726-4170}, doi = {10.5194/bg-10-4991-2013}, pages = {4991 -- 5007}, year = {2013}, abstract = {The relevance of biological Si cycling for dissolved silica (DSi) export from terrestrial biogeosystems is still in debate. Even in systems showing a high content of weatherable minerals, like Cambisols on volcanic tuff, biogenic Si (BSi) might contribute > 50\% to DSi (Gerard et al., 2008). However, the number of biogeosystem studies is rather limited for generalized conclusions. To cover one end of controlling factors on DSi, i.e., weatherable minerals content, we studied a forested site with absolute quartz dominance (> 95 \%). Here we hypothesise minimal effects of chemical weathering of silicates on DSi. During a four year observation period (05/2007-04/2011), we quantified (i) internal and external Si fluxes of a temperate-humid biogeosystem (beech, 120 yr) by BIOME-BGC (version ZALF), (ii) related Si budgets, and (iii) Si pools in soil and beech, chemically as well as by SEM-EDX. For the first time two compartments of biogenic Si in soils were analysed, i.e., phytogenic and zoogenic Si pool (testate amoebae). We quantified an average Si plant uptake of 35 kg Si ha(-1) yr(-1) - most of which is recycled to the soil by litterfall - and calculated an annual biosilicification from idiosomic testate amoebae of 17 kg Si ha(-1). The comparatively high DSi concentrations (6 mg L-1) and DSi exports (12 kg Si ha(-1) yr(-1)) could not be explained by chemical weathering of feldspars or quartz dissolution. Instead, dissolution of a relictic, phytogenic Si pool seems to be the main process for the DSi observed. We identified canopy closure accompanied by a disappearance of grasses as well as the selective extraction of pine trees 30 yr ago as the most probable control for the phenomena observed. From our results we concluded the biogeosystem to be in a transient state in terms of Si cycling.}, language = {en} } @article{SchallerScherwietesGerberetal.2021, author = {Schaller, J{\"o}rg and Scherwietes, Eric and Gerber, Lukas and Vaidya, Shrijana and Kaczorek, Danuta and Pausch, Johanna and Barkusky, Dietmar and Sommer, Michael and Hoffmann, Mathias}, title = {Silica fertilization improved wheat performance and increased phosphorus concentrations during drought at the field scale}, series = {Scientific reports}, volume = {11}, journal = {Scientific reports}, number = {1}, publisher = {Macmillan Publishers Limited, part of Springer Nature}, address = {[London]}, issn = {2045-2322}, doi = {10.1038/s41598-021-00464-7}, pages = {12}, year = {2021}, abstract = {Drought and the availability of mineable phosphorus minerals used for fertilization are two of the important issues agriculture is facing in the future. High phosphorus availability in soils is necessary to maintain high agricultural yields. Drought is one of the major threats for terrestrial ecosystem performance and crop production in future. Among the measures proposed to cope with the upcoming challenges of intensifying drought stress and to decrease the need for phosphorus fertilizer application is the fertilization with silica (Si). Here we tested the importance of soil Si fertilization on wheat phosphorus concentration as well as wheat performance during drought at the field scale. Our data clearly showed a higher soil moisture for the Si fertilized plots. This higher soil moisture contributes to a better plant performance in terms of higher photosynthetic activity and later senescence as well as faster stomata responses ensuring higher productivity during drought periods. The plant phosphorus concentration was also higher in Si fertilized compared to control plots. Overall, Si fertilization or management of the soil Si pools seem to be a promising tool to maintain crop production under predicted longer and more serve droughts in the future and reduces phosphorus fertilizer requirements.}, language = {en} } @article{HeinrichBalanzateguiBensetal.2018, author = {Heinrich, Ingo and Balanzategui, Daniel and Bens, Oliver and Blasch, Gerald and Blume, Theresa and Boettcher, Falk and Borg, Erik and Brademann, Brian and Brauer, Achim and Conrad, Christopher and Dietze, Elisabeth and Dr{\"a}ger, Nadine and Fiener, Peter and Gerke, Horst H. and G{\"u}ntner, Andreas and Heine, Iris and Helle, Gerhard and Herbrich, Marcus and Harfenmeister, Katharina and Heussner, Karl-Uwe and Hohmann, Christian and Itzerott, Sibylle and Jurasinski, Gerald and Kaiser, Knut and Kappler, Christoph and Koebsch, Franziska and Liebner, Susanne and Lischeid, Gunnar and Merz, Bruno and Missling, Klaus Dieter and Morgner, Markus and Pinkerneil, Sylvia and Plessen, Birgit and Raab, Thomas and Ruhtz, Thomas and Sachs, Torsten and Sommer, Michael and Spengler, Daniel and Stender, Vivien and St{\"u}ve, Peter and Wilken, Florian}, title = {Interdisciplinary Geo-ecological Research across Time Scales in the Northeast German Lowland Observatory (TERENO-NE)}, series = {Vadose zone journal}, volume = {17}, journal = {Vadose zone journal}, number = {1}, publisher = {Soil Science Society of America}, address = {Madison}, issn = {1539-1663}, doi = {10.2136/vzj2018.06.0116}, pages = {25}, year = {2018}, abstract = {The Northeast German Lowland Observatory (TERENO-NE) was established to investigate the regional impact of climate and land use change. TERENO-NE focuses on the Northeast German lowlands, for which a high vulnerability has been determined due to increasing temperatures and decreasing amounts of precipitation projected for the coming decades. To facilitate in-depth evaluations of the effects of climate and land use changes and to separate the effects of natural and anthropogenic drivers in the region, six sites were chosen for comprehensive monitoring. In addition, at selected sites, geoarchives were used to substantially extend the instrumental records back in time. It is this combination of diverse disciplines working across different time scales that makes the observatory TERENO-NE a unique observation platform. We provide information about the general characteristics of the observatory and its six monitoring sites and present examples of interdisciplinary research activities at some of these sites. We also illustrate how monitoring improves process understanding, how remote sensing techniques are fine-tuned by the most comprehensive ground-truthing site DEMMIN, how soil erosion dynamics have evolved, how greenhouse gas monitoring of rewetted peatlands can reveal unexpected mechanisms, and how proxy data provides a long-term perspective of current ongoing changes.}, language = {en} }