@article{TrauthSchmidtViewegetal.2015,
  author    = {Trauth, Nico and Schmidt, Christian and Vieweg, Michael and Oswald, Sascha Eric and Fleckenstein, Jan H.},
  title     = {Hydraulic controls of in-stream gravel bar hyporheic exchange and reactions},
  series = {Water resources research},
  volume    = {51},
  journal   = {Water resources research},
  number    = {4},
  publisher = {American Geophysical Union},
  address   = {Washington},
  issn      = {0043-1397},
  doi       = {10.1002/2014WR015857},
  pages     = {2243 -- 2263},
  year      = {2015},
  abstract  = {Hyporheic exchange transports solutes into the subsurface where they can undergo biogeochemical transformations, affecting fluvial water quality and ecology. A three-dimensional numerical model of a natural in-stream gravel bar (20 m x 6 m) is presented. Multiple steady state streamflow is simulated with a computational fluid dynamics code that is sequentially coupled to a reactive transport groundwater model via the hydraulic head distribution at the streambed. Ambient groundwater flow is considered by scenarios of neutral, gaining, and losing conditions. The transformation of oxygen, nitrate, and dissolved organic carbon by aerobic respiration and denitrification in the hyporheic zone are modeled, as is the denitrification of groundwater-borne nitrate when mixed with stream-sourced carbon. In contrast to fully submerged structures, hyporheic exchange flux decreases with increasing stream discharge, due to decreasing hydraulic head gradients across the partially submerged structure. Hyporheic residence time distributions are skewed in the log-space with medians of up to 8 h and shift to symmetric distributions with increasing level of submergence. Solute turnover is mainly controlled by residence times and the extent of the hyporheic exchange flow, which defines the potential reaction area. Although streamflow is the primary driver of hyporheic exchange, its impact on hyporheic exchange flux, residence times, and solute turnover is small, as these quantities exponentially decrease under losing and gaining conditions. Hence, highest reaction potential exists under neutral conditions, when the capacity for denitrification in the partially submerged structure can be orders of magnitude higher than in fully submerged structures.},
  language  = {en}
}
@phdthesis{Trauth2015,
  author    = {Trauth, Nico},
  title     = {Flow and reactive transport modeling at the stream-groundwater interface},
  url       = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-82748},
  school      = {Universit{\"a}t Potsdam},
  pages     = {xv, 103},
  year      = {2015},
  abstract  = {Stream water and groundwater are important fresh water resources but their water quality is deteriorated by harmful solutes introduced by human activities. The interface between stream water and the subsurface water is an important zone for retention, transformation and attenuation of these solutes. Streambed structures enhance these processes by increased water and solute exchange across this interface, denoted as hyporheic exchange. This thesis investigates the influence of hydrological and morphological factors on hyporheic water and solute exchange as well as redox-reactions in fluvial streambed structures on the intermediate scale (10-30m). For this purpose, a three-dimensional numerical modeling approach for coupling stream water flow with porous media flow is used. Multiple steady state stream water flow scenarios over different generic pool-riffle morphologies and a natural in-stream gravel bar are simulated by a computational fluid dynamics code that provides the hydraulic head distribution at the streambed. These heads are subsequently used as the top boundary condition of a reactive transport groundwater model of the subsurface beneath the streambed. Ambient groundwater that naturally interacts with the stream water is considered in scenarios of different magnitudes of downwelling stream water (losing case) and upwelling groundwater (gaining case). Also, the neutral case, where stream stage and groundwater levels are balanced is considered. Transport of oxygen, nitrate and dissolved organic carbon and their reaction by aerobic respiration and denitrification are modeled. The results show that stream stage and discharge primarily induce hyporheic exchange flux and solute transport with implications for specific residence times and reactions at both the fully and partially submerged structures. Gaining and losing conditions significantly diminish the extent of the hyporheic zone, the water exchange flux, and shorten residence times for both the fully and partially submerged structures. With increasing magnitude of gaining or losing conditions, these metrics exponentially decrease. Stream water solutes are transported mainly advectively into the hyporheic zone and hence their influx corresponds directly to the infiltrating water flux. Aerobic respiration takes place in the shallow streambed sediments, coinciding to large parts with the extent of the hyporheic exchange flow. Denitrification occurs mainly as a "reactive fringe" surrounding the aerobic zone, where oxygen concentration is low and still a sufficient amount of stream water carbon source is available. The solute consumption rates and the efficiency of the aerobic and anaerobic reactions depend primarily on the available reactive areas and the residence times, which are both controlled by the interplay between hydraulic head distribution at the streambed and the gradients between stream stage and ambient groundwater. Highest solute consumption rates can be expected under neutral conditions, where highest solute flux, longest residence times and largest extent of the hyporheic exchange occur. The results of this thesis show that streambed structures on the intermediate scale have a significant potential to contribute to a net solute turnover that can support a healthy status of the aquatic ecosystem.},
  language  = {en}
}