Filtern
Dokumenttyp
- Wissenschaftlicher Artikel (4)
- Dissertation (2)
- Postprint (2)
Gehört zur Bibliographie
- ja (8) (entfernen)
Schlagworte
- transition (8) (entfernen)
Evolution of chemical bonding and spin-pairing energy in ferropericlase across Its spin transition
(2022)
The evolution of chemical bonding in ferropericlase, (Mg,Fe)O, with pressure may affect the physical and chemical properties of the Earth's lower mantle. Here, we report high-pressure optical absorption spectra of single-crystalline ferropericlase ((Mg0.87Fe0.13)O) up to 135 GPa. Combined with a re-evaluation of published partial fluorescence yield X-ray absorption spectroscopy data, we show that the covalency of the Fe-O bond increases with pressure, but the iron spin transition at 57-76.5 GPa reverses this trend. The qualitative crossover in chemical bonding suggests that the spin-pairing transition weakens the Fe-O bond in ferropericlase. We find, that the spin transition in ferropericlase is caused by both the increase of the ligand field-splitting energy and the decrease in the spin-pairing energy of high-spin Fe2+.
Coarse-grained molecular model for the Glycosylphosphatidylinositol anchor with and without protein
(2020)
Glycosylphosphatidylinositol (GPI) anchors are a unique class of complex glycolipids that anchor a great variety of proteins to the extracellular leaflet of plasma membranes of eukaryotic cells. These anchors can exist either with or without an attached protein called GPI-anchored protein (GPI-AP) both in vitro and in vivo. Although GPIs are known to participate in a broad range of cellular functions, it is to a large extent unknown how these are related to GPI structure and composition. Their conformational flexibility and microheterogeneity make it difficult to study them experimentally. Simplified atomistic models are amenable to all-atom computer simulations in small lipid bilayer patches but not suitable for studying their partitioning and trafficking in complex and heterogeneous membranes. Here, we present a coarse-grained model of the GPI anchor constructed with a modified version of the MARTINI force field that is suited for modeling carbohydrates, proteins, and lipids in an aqueous environment using MARTINI's polarizable water. The nonbonded interactions for sugars were reparametrized by calculating their partitioning free energies between polar and apolar phases. In addition, sugar-sugar interactions were optimized by adjusting the second virial coefficients of osmotic pressures for solutions of glucose, sucrose, and trehalose to match with experimental data. With respect to the conformational dynamics of GPI-anchored green fluorescent protein, the accessible time scales are now at least an order of magnitude larger than for the all-atom system. This is particularly important for fine-tuning the mutual interactions of lipids, carbohydrates, and amino acids when comparing to experimental results. We discuss the prospective use of the coarse-grained GPI model for studying protein-sorting and trafficking in membrane models.
Coarse-grained molecular model for the Glycosylphosphatidylinositol anchor with and without protein
(2020)
Glycosylphosphatidylinositol (GPI) anchors are a unique class of complex glycolipids that anchor a great variety of proteins to the extracellular leaflet of plasma membranes of eukaryotic cells. These anchors can exist either with or without an attached protein called GPI-anchored protein (GPI-AP) both in vitro and in vivo. Although GPIs are known to participate in a broad range of cellular functions, it is to a large extent unknown how these are related to GPI structure and composition. Their conformational flexibility and microheterogeneity make it difficult to study them experimentally. Simplified atomistic models are amenable to all-atom computer simulations in small lipid bilayer patches but not suitable for studying their partitioning and trafficking in complex and heterogeneous membranes. Here, we present a coarse-grained model of the GPI anchor constructed with a modified version of the MARTINI force field that is suited for modeling carbohydrates, proteins, and lipids in an aqueous environment using MARTINI's polarizable water. The nonbonded interactions for sugars were reparametrized by calculating their partitioning free energies between polar and apolar phases. In addition, sugar-sugar interactions were optimized by adjusting the second virial coefficients of osmotic pressures for solutions of glucose, sucrose, and trehalose to match with experimental data. With respect to the conformational dynamics of GPI-anchored green fluorescent protein, the accessible time scales are now at least an order of magnitude larger than for the all-atom system. This is particularly important for fine-tuning the mutual interactions of lipids, carbohydrates, and amino acids when comparing to experimental results. We discuss the prospective use of the coarse-grained GPI model for studying protein-sorting and trafficking in membrane models.
The present study investigates school context effects on psychosocial characteristics (academic self-concept, peer relations, school satisfaction, and school anxiety) of high-achieving and gifted students. Students who did or did not make an early transition from elementary to secondary schools for high-achieving and gifted students in 5th grade in Berlin, Germany, are compared in their psychosocial development. The sample comprises 155 early-entry students who moved to an academically selective secondary school (Gymnasium) and 3,169 regular students who remained in elementary school until the end of 6th grade. Overall, a complex pattern of psychosocial development emerged for all students, with both positive and negative outcomes being observed. Specifically, the transition into academically selective learning environments seemed to come at some cost for psychosocial development. Propensity score matching analysis isolating the effects of selective school intake and the school context effect itself revealed negative contextual effects of early transition to Gymnasium on academic self-concept and school anxiety; additionally, the positive trend in peer relations observed among regular students was not discernible among early-entry students.
Graphitic carbon nitride, g-C₃N₄, is a promising organic photo-catalyst for a variety of redox reactions. In order to improve its efficiency in a systematic manner, however, a fundamental understanding of the microscopic interaction between catalyst, reactants and products is crucial. Here we present a systematic study of water adsorption on g-C₃N₄ by means of density functional theory and the density functional based tight-binding method as a prerequisite for understanding photocatalytic water splitting. We then analyze this prototypical redox reaction on the basis of a thermodynamic model providing an estimate of the overpotential for both water oxidation and H⁺ reduction. While the latter is found to occur readily upon irradiation with visible light, we derive a prohibitive overpotential of 1.56 eV for the water oxidation half reaction, comparing well with the experimental finding that in contrast to H₂ production O₂ evolution is only possible in the presence of oxidation cocatalysts.
Graphitic carbon nitride, g-C₃N₄, is a promising organic photo-catalyst for a variety of redox reactions. In order to improve its efficiency in a systematic manner, however, a fundamental understanding of the microscopic interaction between catalyst, reactants and products is crucial. Here we present a systematic study of water adsorption on g-C₃N₄ by means of density functional theory and the density functional based tight-binding method as a prerequisite for understanding photocatalytic water splitting. We then analyze this prototypical redox reaction on the basis of a thermodynamic model providing an estimate of the overpotential for both water oxidation and H⁺ reduction. While the latter is found to occur readily upon irradiation with visible light, we derive a prohibitive overpotential of 1.56 eV for the water oxidation half reaction, comparing well with the experimental finding that in contrast to H₂ production O₂ evolution is only possible in the presence of oxidation cocatalysts.
20 Jahre sind mittlerweile vergangen seit die friedliche Protestbewegung zur Abdankung des alten Regimes der Deutschen Demokratischen Republik führte. Im darauf folgenden Jahre kam es zur Wiedervereinigung der beiden deutschen Staaten. Der anschließende Transformationsprozess ist aufgrund der besonderen Umstände in Deutschland einzigartig unter den ehemaligen sozialistischen Staaten Mittel- und Osteuropas. Der Schwerpunkt dieser Arbeit liegt in der Transformation des Verarbeitenden Gewerbes in den Bundesländern Berlin und Brandenburg. Mit der Wiedervereinigung der beiden deutschen Staaten veränderte sich die Situation für die Betriebe im ehemals sozialistischen Teil auf dramatische Weise. Die Auswirkungen werden anhand von Makro- und Mikrodaten analysiert. Untersuchungsgegenstände sind verschiedene ökonomische Indikatoren, wie Zahl von Betrieben und Arbeitsplätzen, Strukturen (nach Größe und Branchen), Umsätze (im In- und Ausland) sowie Investitionen. Der Vergleich von Brandenburg und Ostberlin mit Westberlin bietet dabei die Möglichkeit, Aufschluss über den erreichten Stand des Transformationsprozesses zu erhalten. Die Datenbasis dieser Arbeit besteht neben Angaben aus der Volkswirtschaftlichen Gesamtrechnung der Länder aus verschiedenen betriebsbasierten Erhebungen der amtlichen Statistik. Der Beobachtungszeitraum umfasst dabei die Jahre 1991 bis 2005. Zur Analyse von Betriebs- und Beschäftigungszahlen und ihrer Dynamik steht sogar eine Totalerhebung für die Jahre 1991 bis 2000 zur Verfügung. Ein besonderer Schwerpunkt dieser Arbeit ist die Rolle der Exporte für die betriebliche Entwicklung. Die deutsche Wirtschaftspolitik fördert Unternehmen bei ihrem Schritt auf ausländische Märkte, da man sich von Exporten eine Wachstumsstimulation erhofft. Damit eine solche Förderung auch langfristige positive Effekte entfalten kann, muss einerseits der Export positiven Einfluss auf das Produktivitätswachstum des betreffenden Betriebes haben, und andererseits muss das Exportverhalten eine gewisse Persistenz aufweisen. Beide Bedingungen werden innerhalb der Arbeit detailliert untersucht.
Subject of this work is the investigation of generic synchronization phenomena in interacting complex systems. These phenomena are observed, among all, in coupled deterministic chaotic systems. At very weak interactions between individual systems a transition to a weakly coherent behavior of the systems can take place. In coupled continuous time chaotic systems this transition manifests itself with the effect of phase synchronization, in coupled chaotic discrete time systems with the effect of non-vanishing macroscopic mean field. Transition to coherence in a chain of locally coupled oscillators described with phase equations is investigated with respect to the symmetries in the system. It is shown that the reversibility of the system caused by these symmetries results to non-trivial topological properties of trajectories so that the system constructed to be dissipative reveals in a whole parameter range quasi-Hamiltonian features, i.e. the phase volume is conserved on average and Lyapunov exponents come in symmetric pairs. Transition to coherence in an ensemble of globally coupled chaotic maps is described with the loss of stability of the disordered state. The method is to break the self-consistensy of the macroscopic field and to characterize the ensemble in analogy to an amplifier circuit with feedback with a complex linear transfer function. This theory is then generalized for several cases of theoretic interest.