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A standard protocol for describing individual-based and agent-based models

  • Simulation models that describe autonomous individual organisms (individual based models, IBM) or agents (agent-based models, ABM) have become a widely used tool, not only in ecology, but also in many other disciplines dealing with complex systems made up of autonomous entities. However, there is no standard protocol for describing such simulation models, which can make them difficult to understand and to duplicate. This paper presents a proposed standard protocol, ODD, for describing IBMs and ABMs, developed and tested by 28 modellers who cover a wide range of fields within ecology. This protocol consists of three blocks (Overview, Design concepts, and Details), which are subdivided into seven elements: Purpose, State variables and scales, Process overview and scheduling, Design concepts, Initialization, Input, and Submodels. We explain which aspects of a model should be described in each element, and we present an example to illustrate the protocol in use. In addition, 19 examples are available in an Online Appendix. We consider ODDSimulation models that describe autonomous individual organisms (individual based models, IBM) or agents (agent-based models, ABM) have become a widely used tool, not only in ecology, but also in many other disciplines dealing with complex systems made up of autonomous entities. However, there is no standard protocol for describing such simulation models, which can make them difficult to understand and to duplicate. This paper presents a proposed standard protocol, ODD, for describing IBMs and ABMs, developed and tested by 28 modellers who cover a wide range of fields within ecology. This protocol consists of three blocks (Overview, Design concepts, and Details), which are subdivided into seven elements: Purpose, State variables and scales, Process overview and scheduling, Design concepts, Initialization, Input, and Submodels. We explain which aspects of a model should be described in each element, and we present an example to illustrate the protocol in use. In addition, 19 examples are available in an Online Appendix. We consider ODD as a first step for establishing a more detailed common format of the description of IBMs and ABMs. Once initiated, the protocol will hopefully evolve as it becomes used by a sufficiently large proportion of modellers. (c) 2006 Elsevier B.V. All rights reserved.show moreshow less

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Author details:Volker GrimmORCiDGND, Uta BergerORCiDGND, Finn Bastiansen, Sigrunn Eliassen, Vincent Ginot, Jarl GiskeORCiD, John Goss-Custard, Tamara Grand, Simone K. Heinz, Geir Huse, Andreas Huth, Jane U. Jepsen, Christian JorgensenORCiD, Wolf M. Mooij, Birgit Mueller, Cyril PiouORCiDGND, Steven Floyd RailsbackORCiDGND, Andrew M. RobbinsORCiD, Martha M. RobbinsGND, Eva Rossmanith, Nadja Rueger, Espen Strand, Sami SouissiORCiD, Richard A. Stillman, Rune Vabo, Ute Visser, Donald L. DeAngelis
DOI:https://doi.org/10.1016/j.ecolmodel.2006.04.023
ISSN:0304-3800
Title of parent work (English):Ecological modelling : international journal on ecological modelling and engineering and systems ecolog
Publisher:Elsevier
Place of publishing:Amsterdam
Publication type:Article
Language:English
Date of first publication:2006/04/26
Publication year:2006
Release date:2020/05/26
Tag:agent-based model; individual-based model; model description; scientific communication; standardization
Volume:198
Number of pages:12
First page:115
Last Page:126
Organizational units:Mathematisch-Naturwissenschaftliche Fakultät / Institut für Biochemie und Biologie
DDC classification:5 Naturwissenschaften und Mathematik / 57 Biowissenschaften; Biologie / 570 Biowissenschaften; Biologie
Peer review:Referiert
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