TY - JOUR A1 - Schedina, Ina Maria A1 - Groth, Detlef A1 - Schlupp, Ingo A1 - Tiedemann, Ralph T1 - The gonadal transcriptome of the unisexual Amazon molly Poecilia formosa in comparison to its sexual ancestors, Poecilia mexicana and Poecilia latipinna JF - BMC Genomics N2 - Background The unisexual Amazon molly (Poecilia formosa) originated from a hybridization between two sexual species, the sailfin molly (Poecilia latipinna) and the Atlantic molly (Poecilia mexicana). The Amazon molly reproduces clonally via sperm-dependent parthenogenesis (gynogenesis), in which the sperm of closely related species triggers embryogenesis of the apomictic oocytes, but typically does not contribute genetic material to the next generation. We compare for the first time the gonadal transcriptome of the Amazon molly to those of both ancestral species, P. mexicana and P. latipinna. Results We sequenced the gonadal transcriptomes of the P. formosa and its parental species P. mexicana and P. latipinna using Illumina RNA-sequencing techniques (paired-end, 100 bp). De novo assembly of about 50 million raw read pairs for each species was performed using Trinity, yielding 106,922 transcripts for P. formosa, 115,175 for P. latipinna, and 133,025 for P. mexicana after eliminating contaminations. On the basis of sequence similarity comparisons to other teleost species and the UniProt databases, functional annotation, and differential expression analysis, we demonstrate the similarity of the transcriptomes among the three species. More than 40% of the transcripts for each species were functionally annotated and about 70% were assigned to orthologous genes of a closely related species. Differential expression analysis between the sexual and unisexual species uncovered 2035 up-regulated and 564 down-regulated genes in P. formosa. This was exemplary validated for six genes by qRT-PCR. Conclusions We identified more than 130 genes related to meiosis and reproduction within the apomictically reproducing P. formosa. Overall expression of these genes seems to be down-regulated in the P. formosa transcriptome compared to both ancestral species (i.e., 106 genes down-regulated, 29 up-regulated). A further 35 meiosis and reproduction related genes were not found in the P. formosa transcriptome, but were only expressed in the sexual species. Our data support the hypothesis of general down-regulation of meiosis-related genes in the apomictic Amazon molly. Furthermore, the obtained dataset and identified gene catalog will serve as a resource for future research on the molecular mechanisms behind the reproductive mode of this unisexual species. KW - Differential gene expression KW - Gynogenesis KW - Hybrid speciation KW - Meiosis KW - Poecilia formosa KW - Poecilia latipinna KW - Poecilia mexicana Y1 - 2018 U6 - https://doi.org/10.1186/s12864-017-4382-2 SN - 1471-2164 VL - 19 IS - 12 SP - 1 EP - 18 PB - BioMed Central CY - London ER - TY - JOUR A1 - Bents, Dominik A1 - Groth, Detlef A1 - Satake, Takashi T1 - The secular trend and network effects on height of male Japanese students from 1955 to 2015 JF - Journal of biological and clinical anthropology JF - Anthropologischer Anzeiger ; Mitteilungsorgan der Gesellschaft für Anthropologie N2 - Introduction: Body height is influenced by biological factors such as genetics, nutrition and health, but also by the social network, and environmental and economical factors. During centuries, the Japanese society has developed on islands. This setting provides ideal natural conditions for studying the influence of social networks on human height. Material and methods: We investigated body height of male Japanese students aged 17.5 years obtained in 47 prefectures, from the Japanese school health survey of the years 1955, 1975, 1995, and 2015. Results: Japanese students increased in height from 163.23 cm in 1955 to 170.84 cm in 1995, with no further increase thereafter (170.63 cm in 2015). Students living in neighboring prefectures were similar in height. The correlation of height between neighboring prefectures ranged between r = 0.79 and r = 0.49 among first degree neighbors, between r = 0.49 and r = 0.21 among second degree neighbors and dropped to insignificance among third degree neighbors indicating psychosocial effects of the community on body height. Tall stature and short stature prefectures did not remain tall or short throughout history. Autocorrelations of height within the same prefectures decreased from the 20 years periods of 1955-1975, 1975-1995 and 1995-2015 (r = 0.52, r = 0.61, r = 0.63, respectively) to the 40 years periods of 1955-1995 and 1975-2015 (r = 0.49, r = 0.52), down to the 60 years period of 1955-2015 (r = 0.27), indicating significant volatility of height. Conclusion: Body height of 17.5 years old Japanese students increased since 1955. Body height depended on height of the neighboring prefecture, but was volatile with decreasing autocorrelation during a period of 60 years. KW - body height KW - community effect KW - neighbor correlation KW - Japan Y1 - 2018 U6 - https://doi.org/10.1127/anthranz/2018/0838 SN - 0003-5548 VL - 74 IS - 5 SP - 423 EP - 429 PB - Schweizerbart CY - Stuttgart ER - TY - JOUR A1 - Liu, Yuk-Chien A1 - Groth, Detlef T1 - Body height, social dominance and the political climate BT - a comment JF - Journal of biological and clinical anthropology JF - Anthropologischer Anzeiger ; Mitteilungsorgan der Gesellschaft für Anthropologie N2 - Background: The association between stature and social dominance is known. Dominance within social groups and current politics are related issues. We therefore aimed to compare estimates of the opinion of a population about their current political issues, with physical growth. Material and methods: We used data on the 2012 and the 2014 elections for the Japanese House of Representatives and the percent proportion of votes of the 47 prefectures of Japan, and regional data on body height of 17.5 year old men and women. Information on capita income, possession of mobile phones, urban/rural population ratio, and age distribution were added to capture socioeconomic factors. Four political parties were present in most of the 47 prefectures: the Liberal Democratic Party (LDP), the Democratic Party of Japan (DPJ), the New Komeito Party (Kom) that is known for their social network community, and the Japanese Communist Party (JCP). Results: A dense network of associations exists between height, age distribution, per capita income, number of smartphones, and voting results. Male and female body height was inversely related with the proportion of votes for New Komeito Party. Average stature decreases by one mm per percent votes for this political party. Medium strong positive associations were found for male body height and voting results of the DPJ and for female body height with the JCP election results. Conclusion: In modern Japan, popular preferences for conservative political structures coincide with shorter stature. KW - stature KW - social dominance KW - strategic growth adjustments Y1 - 2018 U6 - https://doi.org/10.1127/anthranz/2018/0855 SN - 0003-5548 VL - 74 IS - 5 SP - 445 EP - 450 PB - Schweizerbart CY - Stuttgart ER - TY - JOUR A1 - Koziel, Slawomir A1 - Scheffler, Christiane A1 - Tutkuviene, Janina A1 - Jakimaviciene, Egle Marija A1 - Mumm, Rebekka A1 - Barbieri, Davide A1 - Godina, Elena A1 - El-Shabrawi, Mortada A1 - Elhusseini, Mona A1 - Musalek, Martin A1 - Pruszkowska-Przybylska, Paulina A1 - El Dash, Hanaa H. A1 - Safar, Hebatalla Hassan A1 - Lehmann, Andreas A1 - Swanson, James A1 - Bogin, Barry A1 - Liu, Yuk-Chien A1 - Groth, Detlef A1 - Kirchengast, Sylvia A1 - Siniarska, Anna A1 - Nieczuja-Dwojacka, Joanna A1 - Kralik, Miroslav A1 - Satake, Takashi A1 - Harc, Tomasz A1 - Roelants, Mathieu A1 - Hermanussen, Michael T1 - Meeting Report: Growth and social environment BT - Proceedings of the 25th Aschauer Soiree, held at Krobielowice, Poland, November 18th 2017 JF - Pediatric Endocrinology Reviews N2 - Twenty-two scientists met at Krobielowice, Poland, to discuss the impact of the social environment, spatial proximity, migration, poverty, but also psychological factors such as body perception and satisfaction, and social stressors such as elite sports, and teenage pregnancies, on child and adolescent growth. The data analysis included linear mixed effects models with different random effects, Monte Carlo analyses, and network simulations. The work stressed the importance of the peer group, but also included historic material, some considerations about body proportions, and growth in chronic liver, and congenital heart disease. KW - Body height KW - Social environment KW - Strategic growth adjustment KW - Competitive growth KW - Community effects on growth Y1 - 2018 U6 - https://doi.org/10.17458/per.vol15.2018.ksh.mr.GrowthSocialEnvironment SN - 1565-4753 VL - 15 IS - 4 SP - 319 EP - 329 PB - Medical Media CY - Netanya ER - TY - GEN A1 - Hermanussen, Michael A1 - Scheffler, Christiane A1 - Groth, Detlef A1 - Bogin, Barry T1 - Perceiving stunting - Student research and the "Lieschen Muller effect" in nutrition science T2 - Journal of biological and clinical anthropology : Anthropologischer Anzeiger ; Mitteilungsorgan der Gesellschaft für Anthropologie KW - stunting KW - undernutrition KW - strategic growth adjustments KW - competitive growth KW - community effect on height Y1 - 2018 U6 - https://doi.org/10.1127/anthranz/2018/0858 SN - 0003-5548 VL - 74 IS - 5 SP - 355 EP - 358 PB - Schweizerbart CY - Stuttgart ER -