TY - JOUR A1 - de Abreu e Lima, Francisco Anastacio A1 - Li, Kun A1 - Wen, Weiwei A1 - Yan, Jianbing A1 - Nikoloski, Zoran A1 - Willmitzer, Lothar A1 - Brotman, Yariv T1 - Unraveling lipid metabolism in maize with time-resolved multi-omics data JF - The plant journal N2 - Maize is the cereal crop with the highest production worldwide, and its oil is a key energy resource. Improving the quantity and quality of maize oil requires a better understanding of lipid metabolism. To predict the function of maize genes involved in lipid biosynthesis, we assembled transcriptomic and lipidomic data sets from leaves of B73 and the high-oil line By804 in two distinct time-series experiments. The integrative analysis based on high-dimensional regularized regression yielded lipid-transcript associations indirectly validated by Gene Ontology and promoter motif enrichment analyses. The co-localization of lipid-transcript associations using the genetic mapping of lipid traits in leaves and seedlings of a B73 x By804 recombinant inbred line population uncovered 323 genes involved in the metabolism of phospholipids, galactolipids, sulfolipids and glycerolipids. The resulting association network further supported the involvement of 50 gene candidates in modulating levels of representatives from multiple acyl-lipid classes. Therefore, the proposed approach provides high-confidence candidates for experimental testing in maize and model plant species. KW - Zea mays KW - lipid metabolism KW - omics KW - GFLASSO KW - QTL Y1 - 2018 U6 - https://doi.org/10.1111/tpj.13833 SN - 0960-7412 SN - 1365-313X VL - 93 IS - 6 SP - 1102 EP - 1115 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Hansen, Bjoern Oest A1 - Meyer, Etienne H. A1 - Ferrari, Camilla A1 - Vaid, Neha A1 - Movahedi, Sara A1 - Vandepoele, Klaas A1 - Nikoloski, Zoran A1 - Mutwil, Marek T1 - Ensemble gene function prediction database reveals genes important for complex I formation in Arabidopsis thaliana JF - New phytologist : international journal of plant science N2 - Recent advances in gene function prediction rely on ensemble approaches that integrate results from multiple inference methods to produce superior predictions. Yet, these developments remain largely unexplored in plants. We have explored and compared two methods to integrate 10 gene co-function networks for Arabidopsis thaliana and demonstrate how the integration of these networks produces more accurate gene function predictions for a larger fraction of genes with unknown function. These predictions were used to identify genes involved in mitochondrial complex I formation, and for five of them, we confirmed the predictions experimentally. The ensemble predictions are provided as a user-friendly online database, EnsembleNet. The methods presented here demonstrate that ensemble gene function prediction is a powerful method to boost prediction performance, whereas the EnsembleNet database provides a cutting-edge community tool to guide experimentalists. KW - Arabidopsis thaliana KW - co-function network KW - complex I KW - ensemble prediction KW - gene function prediction Y1 - 2017 U6 - https://doi.org/10.1111/nph.14921 SN - 0028-646X SN - 1469-8137 VL - 217 IS - 4 SP - 1521 EP - 1534 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Song, Yu A1 - Li, Gang A1 - Nowak, Jacqueline A1 - Zhang, Xiaoqing A1 - Xu, Dongbei A1 - Yang, Xiujuan A1 - Huang, Guoqiang A1 - Liang, Wanqi A1 - Yang, Litao A1 - Wang, Canhua A1 - Bulone, Vincent A1 - Nikoloski, Zoran A1 - Hu, Jianping A1 - Persson, Staffan A1 - Zhang, Dabing T1 - The Rice Actin-Binding Protein RMD Regulates Light-Dependent Shoot Gravitropism JF - Plant physiology : an international journal devoted to physiology, biochemistry, cellular and molecular biology, biophysics and environmental biology of plants N2 - Light and gravity are two key determinants in orientating plant stems for proper growth and development. The organization and dynamics of the actin cytoskeleton are essential for cell biology and critically regulated by actin-binding proteins. However, the role of actin cytoskeleton in shoot negative gravitropism remains controversial. In this work, we report that the actin-binding protein Rice Morphology Determinant (RMD) promotes reorganization of the actin cytoskeleton in rice (Oryza sativa) shoots. The changes in actin organization are associated with the ability of the rice shoots to respond to negative gravitropism. Here, light-grown rmd mutant shoots exhibited agravitropic phenotypes. By contrast, etiolated rmd shoots displayed normal negative shoot gravitropism. Furthermore, we show that RMD maintains an actin configuration that promotes statolith mobility in gravisensing endodermal cells, and for proper auxin distribution in light-grown, but not dark-grown, shoots. RMD gene expression is diurnally controlled and directly repressed by the phytochrome-interacting factor-like protein OsPIL16. Consequently, overexpression of OsPIL16 led to gravisensing and actin patterning defects that phenocopied the rmd mutant. Our findings outline a mechanism that links light signaling and gravity perception for straight shoot growth in rice. Y1 - 2019 U6 - https://doi.org/10.1104/pp.19.00497 SN - 0032-0889 SN - 1532-2548 VL - 181 IS - 2 SP - 630 EP - 644 PB - American Society of Plant Physiologists CY - Rockville ER - TY - JOUR A1 - Janowski, Marcin Andrzej A1 - Zoschke, Reimo A1 - Scharff, Lars B. A1 - Jaime, Silvia Martinez A1 - Ferrari, Camilla A1 - Proost, Sebastian A1 - Xiong, Jonathan Ng Wei A1 - Omranian, Nooshin A1 - Musialak-Lange, Magdalena A1 - Nikoloski, Zoran A1 - Graf, Alexander A1 - Schoettler, Mark Aurel A1 - Sampathkumar, Arun A1 - Vaid, Neha A1 - Mutwil, Marek T1 - AtRsgA from Arabidopsis thaliana is important for maturation of the small subunit of the chloroplast ribosome JF - The plant journal N2 - Plastid ribosomes are very similar in structure and function to the ribosomes of their bacterial ancestors. Since ribosome biogenesis is not thermodynamically favorable under biological conditions it requires the activity of many assembly factors. Here we have characterized a homolog of bacterial RsgA in Arabidopsis thaliana and show that it can complement the bacterial homolog. Functional characterization of a strong mutant in Arabidopsis revealed that the protein is essential for plant viability, while a weak mutant produced dwarf, chlorotic plants that incorporated immature pre-16S ribosomal RNA into translating ribosomes. Physiological analysis of the mutant plants revealed smaller, but more numerous, chloroplasts in the mesophyll cells, reduction of chlorophyll a and b, depletion of proplastids from the rib meristem and decreased photosynthetic electron transport rate and efficiency. Comparative RNA sequencing and proteomic analysis of the weak mutant and wild-type plants revealed that various biotic stress-related, transcriptional regulation and post-transcriptional modification pathways were repressed in the mutant. Intriguingly, while nuclear- and chloroplast-encoded photosynthesis-related proteins were less abundant in the mutant, the corresponding transcripts were increased, suggesting an elaborate compensatory mechanism, potentially via differentially active retrograde signaling pathways. To conclude, this study reveals a chloroplast ribosome assembly factor and outlines the transcriptomic and proteomic responses of the compensatory mechanism activated during decreased chloroplast function. Significance Statement AtRsgA is an assembly factor necessary for maturation of the small subunit of the chloroplast ribosome. Depletion of AtRsgA leads to dwarfed, chlorotic plants, a decrease of mature 16S rRNA and smaller, but more numerous, chloroplasts. Large-scale transcriptomic and proteomic analysis revealed that chloroplast-encoded and -targeted proteins were less abundant, while the corresponding transcripts were increased in the mutant. We analyze the transcriptional responses of several retrograde signaling pathways to suggest the mechanism underlying this compensatory response. KW - ribosome assembly KW - chloroplast ribosome KW - assembly factor KW - 30S subunit KW - RsgA KW - Arabidopsis thaliana Y1 - 2018 U6 - https://doi.org/10.1111/tpj.14040 SN - 0960-7412 SN - 1365-313X VL - 96 IS - 2 SP - 404 EP - 420 PB - Wiley CY - Hoboken ER - TY - GEN A1 - Dosdall, Henrik T1 - Wie algorithmische Technologien wirksam werden T2 - VERSUS : Magazin für kritische Organisationspraxis N2 - Im Digitalisierungsdiskurs dominiert die Vorstellung, algorithmische Technologien änderten Organisationen fundamental. Demgegenüber argumentiert der Artikel, dass die Wirkmächtigkeit algorithmischer Technologien davon abhängt, wie Organisationen sie in ihre Entscheidungs­architektur einbinden. KW - Digitalisierung Y1 - 2022 UR - https://versus-online-magazine.com/de/artikel/wirksamkeit-algorithmischer-technologien/ PB - Metaplan® – Gesellschaft für Planung und Organisation mbH CY - Quickborn ER - TY - JOUR A1 - Pilz, Marco A1 - Cotton, Fabrice T1 - Does the One-Dimensional Assumption Hold for Site Response Analysis? BT - A Study of Seismic Site Responses and Implication for Ground Motion Assessment Using KiK-Net Strong-Motion Data JF - Earthquake spectra : the professional journal of the Earthquake Engineering Research Institute N2 - The one-dimensional (1-D) approach is still the dominant method to incorporate site effects in engineering applications. To bridge the 1-D to multidimensional site response analysis, we develop quantitative criteria and a reproducible method to identify KiK-net sites with significant deviations from 1-D behavior. We found that 158 out of 354 show two-dimensional (2-D) and three-dimensional (3-D) effects, extending the resonance toward shorter periods at which 2-D or 3-D site effects exceed those of the classic 1-D configurations and imposing an additional amplification to that caused by the impedance contrast alone. Such 2-D and 3-D effects go along with a large within-station ground motion variability. Remarkably, these effects are found to be more pronounced for small impedance contrasts. While it is hardly possible to identify common features in ground motion behavior for stations with similar topography typologies, it is not over-conservative to apply a safety factor to account for 2-D and 3-D site effects in ground motion modeling. Y1 - 2019 U6 - https://doi.org/10.1193/050718EQS113M SN - 8755-2930 SN - 1944-8201 VL - 35 IS - 2 SP - 883 EP - 905 PB - Earthquake Engineering Research Institute CY - Oakland ER - TY - GEN A1 - Grünthal, Gottfried A1 - Stromeyer, Dietrich A1 - Bosse, Christian A1 - Cotton, Fabrice A1 - Bindi, Dino T1 - Correction to: The probabilistic seismic hazard assessment of Germanyversion 2016, considering the range of epistemic uncertainties and aleatory variability (vol 16, pg 4339, 2018) T2 - Bulletin of earthquake engineering : official publication of the European Association for Earthquake Engineering N2 - One paragraph of the manuscript of the paper has been inadvertently omitted in the very final stage of its compilation due to a technical mistake. Since this paragraph discusses the declustering of the used earthquake catalogue and is therefore necessary for the understanding of the seismicity data preprocessing, the authors decided to provide this paragraph in form of a correction. The respective paragraph belongs to chapter 2 of the paper, where it was placed originally, and should be inserted into the published paper before the second to the last paragraph. The omitted text reads as follows: Y1 - 2918 U6 - https://doi.org/10.1007/s10518-018-0398-5 SN - 1570-761X SN - 1573-1456 VL - 16 IS - 10 SP - 4397 EP - 4398 PB - Springer CY - Dordrecht ER - TY - JOUR A1 - Schulze, Matthias Bernd T1 - Dietary linoleic acid: will modifying dietary fat quality reduce the risk of type 2 diabetes? JF - Diabetes care Y1 - 2021 U6 - https://doi.org/10.2337/dci21-0031 SN - 0149-5992 SN - 1935-5548 VL - 44 IS - 9 SP - 1913 EP - 1915 PB - American Diabetes Association CY - Alexandria ER - TY - JOUR A1 - Schmidt, Max Oliver T1 - Kirchenasyl als Solidarisierung BT - umkämpftes soziales Gut JF - Pax Zeit : Zeitschrift der Deutschen Sektion von Pax Christi Y1 - 2020 UR - https://www.paxchristi.de/file/download/AMIfv952MjWMWXF-eVYzdtrIjuo8hyDLrWsf5NBFQUsAQw3zfj810BcAFgK2by2QzIVlFyqpsGHeZgNuUZCcIWE38BZNJZcARf3aHRxCzVwJHx8fpKChqCsuTh85-vPie_7LkDR8bJ0Fj9esgQYS7uwlyuja-WmR4sBlc5d478j-3PVLAybx17jAuROPcPta3t1E4OSHeV6YpNlWYSNhTZaUJdIDeqZrXCEPNVDDtq9Kt55SUxPceAkUx9u2zwYvM9NUwqd1tWp0wtu-rzv2nm6TpR55u9wghouR583U4pTPoB3M9k_ayBM/pax_zeit%201_2020.pdf IS - 1 SP - 16 EP - 17 PB - Pax Christi-Bewegung, Dt. Sektion CY - Berlin ER - TY - JOUR A1 - Ullrich, André A1 - Vladova, Gergana A1 - Marquart, Danny A1 - Braun, Andreas A1 - Gronau, Norbert T1 - An overwiew of benefits and risks in open innovation projects and the influence of intermediary participation, decision-making authority, experience, and position on their perception JF - International journal of innovation management : IJIM N2 - This paper presents an exploratory study investigating the influence of the factors (1) intermediary participation, (2) decision-making authority, (3) position in the enterprise, and (4) experience in open innovation on the perception and assessment of the benefits and risks expected from participating in open innovation projects. For this purpose, an online survey was conducted in Germany, Austria and Switzerland. The result of this paper is an empirical evidence showing whether and how these factors affect the perception of potential benefits and risks expected within the context of open innovation project participation. Furthermore, the identified effects are discussed against the theory. Existing theory regarding the benefits and risks of open innovation is expanded by (1) finding that they are perceived mostly independently of the factors, (2) confirming the practical relevance of benefits and risks, and (3) enabling a finer distinction between their degrees of relevance according to respective contextual specifics. KW - Open innovation KW - intermediaries KW - benefits KW - decision-making KW - experience; KW - risks Y1 - 2022 U6 - https://doi.org/10.1142/S1363919622500128 SN - 1363-9196 SN - 1757-5877 VL - 26 IS - 02 PB - World Scientific Publ. CY - Singapore ER - TY - JOUR A1 - Leins, Johannes A. A1 - Banitz, Thomas A1 - Grimm, Volker A1 - Drechsler, Martin T1 - High-resolution PVA along large environmental gradients to model the combined effects of climate change and land use timing BT - lessons from the large marsh grasshopper JF - Ecological modelling : international journal on ecological modelling and systems ecology N2 - Both climate change and land use regimes affect the viability of populations, but they are often studied separately. Moreover, population viability analyses (PVAs) often ignore the effects of large environmental gradients and use temporal resolutions that are too coarse to take into account that different stages of a population's life cycle may be affected differently by climate change. Here, we present the High-resolution Large Environmental Gradient (HiLEG) model and apply it in a PVA with daily resolution based on daily climate projections for Northwest Germany. We used the large marsh grasshopper (LMG) as the target species and investigated (1) the effects of climate change on the viability and spatial distribution of the species, (2) the influence of the timing of grassland mowing on the species and (3) the interaction between the effects of climate change and grassland mowing. The stageand cohort-based model was run for the spatially differentiated environmental conditions temperature and soil moisture across the whole study region. We implemented three climate change scenarios and analyzed the population dynamics for four consecutive 20-year periods. Climate change alone would lead to an expansion of the regions suitable for the LMG, as warming accelerates development and due to reduced drought stress. However, in combination with land use, the timing of mowing was crucial, as this disturbance causes a high mortality rate in the aboveground life stages. Assuming the same date of mowing throughout the region, the impact on viability varied greatly between regions due to the different climate conditions. The regional negative effects of the mowing date can be divided into five phases: (1) In early spring, the populations were largely unaffected in all the regions; (2) between late spring and early summer, they were severely affected only in warm regions; (3) in summer, all the populations were severely affected so that they could hardly survive; (4) between late summer and early autumn, they were severely affected in cold regions; and (5) in autumn, the populations were equally affected across all regions. The duration and start of each phase differed slightly depending on the climate change scenario and simulation period, but overall, they showed the same pattern. Our model can be used to identify regions of concern and devise management recommendations. The model can be adapted to the life cycle of different target species, climate projections and disturbance regimes. We show with our adaption of the HiLEG model that high-resolution PVAs and applications on large environmental gradients can be reconciled to develop conservation strategies capable of dealing with multiple stressors. KW - Climate change KW - Land use KW - Population viability analysis KW - Stage-based model KW - High resolution KW - Environmental gradients Y1 - 2020 U6 - https://doi.org/10.1016/j.ecolmodel.2020.109355 SN - 0304-3800 SN - 1872-7026 VL - 440 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Shaki, Samuel A1 - Fischer, Martin H. T1 - Nothing to dance about: unclear evidence for symbolic representations and numerical competence in honeybees BT - a comment on: symbolic representation of numerosity by honeybees (Apis mellifera): matching characters to small quantities JF - Proceedings of the Royal Society of London : B, Biological sciences Y1 - 2020 U6 - https://doi.org/10.1098/rspb.2019.2840 SN - 0962-8452 SN - 1471-2954 VL - 287 IS - 1925 PB - Royal Society CY - London ER - TY - JOUR A1 - Ferrer, Beatriz A1 - Peres, Tanara Vieira A1 - dos Santos, Alessandra Antunes A1 - Bornhorst, Julia A1 - Morcillo, Patricia A1 - Goncalves, Cinara Ludvig A1 - Aschner, Michael T1 - Methylmercury affects the expression of hypothalamic neuropeptides that control body weight in C57BL/6J mice JF - Toxicological sciences N2 - Methylmercury (MeHg) is an environmental pollutant that affects primarily the central nervous system (CNS), causing neurological alterations. An early symptom of MeHg poisoning is the loss of body weight and appetite. Moreover, the CNS has an important role in controlling energy homeostasis. It is known that in the hypothalamus nutrient and hormonal signals converge to orchestrate control of body weight and food intake. In this study, we investigated if MeHg is able to induce changes in the expression of key hypothalamic neuropeptides that regulate energy homeostasis. Thus, hypothalamic neuronal mouse cell line GT 1-7 was treated with MeHg at different concentrations (0, 0.5, 1, and 5 mu M). MeHg induced the expression of the anorexigenic neuropeptide pro-omiomelanocortin (Pomc) and the orexigenic peptide Agouti-related peptide (Agrp) in a concentration-dependent manner, suggesting deregulation of mechanisms that control body weight. To confirm these in vitro observations, 8-week-old C57BL/6J mice (males and females) were exposed to MeHg in drinking water, modeling the most prevalent exposure route to this metal. After 30-day exposure, no changes in body weight were detected. However, MeHg treated males showed a significant decrease in fat depots. Moreover, MeHg affected the expression of hypothalamic neuropeptides that control food intake and body weight in a gender-and dose-dependent manner. Thus, MeHg increases Pomc mRNA only in males in a dose-dependent way, and it does not have effects on the expression of Agrp mRNA. The present study shows, for first time, that MeHg is able to induce changes in hypothalamic neuropeptides that regulate energy homeostasis, favoring an anorexigenic/catabolic profile. KW - methylmercury KW - hypothalamus KW - neuropeptides KW - control body weight KW - glucose homeostasis Y1 - 2018 U6 - https://doi.org/10.1093/toxsci/kfy052 SN - 1096-6080 SN - 1096-0929 VL - 163 IS - 2 SP - 557 EP - 568 PB - Oxford Univ. Press CY - Oxford ER - TY - GEN A1 - Hölzle, Katharina A1 - Boer, Harry A1 - Björk, Jennie T1 - Crisis management through creativity and innovation BT - storytelling, moral organizational creativity, and open innovation as creative means to spark innovation T2 - Creativity and innovation management Y1 - 2020 U6 - https://doi.org/10.1111/caim.12385 SN - 0963-1690 SN - 1467-8691 VL - 29 IS - 2 SP - 195 EP - 197 PB - Wiley-Blackwell CY - Oxford [u.a.] ER - TY - JOUR A1 - Pessanha, Tatiana A1 - Paschoalino, Waldemir J. A1 - Deroco, Patricia B. A1 - Kogikoski Junior, Sergio A1 - Moraes, Ana C. M. de A1 - Carvalho Castro de Silva, Cecilia de A1 - Kubota, Lauro T. T1 - Interfacial capacitance of graphene oxide films electrodes BT - Fundamental studies on electrolytes interface aiming (bio)sensing applications JF - Electroanalysis : an internatinal journal devoted to electroanalysis, sensors and bioelectronic devices N2 - The understanding of bidimensional materials dynamics and its electrolyte interface equilibrium, such as graphene oxide (GO), is critical for the development of a capacitive biosensing platform. The interfacial capacitance (C-i) of graphene-based materials may be tuned by experimental conditions such as pH optimization and cation size playing key roles at the enhancement of their capacitive properties allowing their application as novel capacitive biosensors. Here we reported a systematic study of C-i of multilayer GO films in different aqueous electrolytes employing electrochemical impedance spectroscopy for the application in a capacitive detection system. We demonstrated that the presence of ionizable oxygen-containing functional groups within multilayer GO film favors the interactions and the accumulation of cations in the structure of the electrodes enhancing the GO C-i in aqueous solutions, where at pH 7.0 (the best condition) the C-i was 340 mu F mg(-1) at -0.01 V vs Ag/AgCl. We also established that the hydrated cation radius affects the mobility and interaction with GO functional groups and it plays a critical role in the Ci, as demonstrated in the presence of different cations Na+=640 mu F mg(-1), Li+=575 mu F mg(-1) and TMA(+)=477 mu F mg(-1). As a proof-of-concept, the capacitive behaviour of GO was explored as biosensing platform for standard streptavidin-biotin systems. For this system, the C-i varied linearly with the log of the concentration of the targeting analyte in the range from 10 pg mL(-1) to 100 ng mL(-1), showing the promising applicability of capacitive GO based sensors for label-free biosensing. KW - Interfacial capacitance KW - Graphene oxide KW - Functional groups KW - Electrochemical impedance KW - Graphene derivates Y1 - 2021 U6 - https://doi.org/10.1002/elan.202100220 SN - 1521-4109 SN - 1040-0397 VL - 34 IS - 4 SP - 692 EP - 700 PB - Wiley-VCH CY - Weinheim ER - TY - JOUR A1 - Bosch, Sina A1 - Verissimo, Joao Marques A1 - Clahsen, Harald T1 - Inflectional morphology in bilingual language processing BT - An age-of-acquisition study JF - Language acquisition : a journal of developmental linguistics N2 - This study addresses the question of how age of acquisition (AoA) affects grammatical processing, specifically with respect to inflectional morphology, in bilinguals. We examined experimental data of more than 100 participants from the Russian/German community in Berlin, all of whom acquired Russian from birth and German at different ages. Using the cross-modal lexical priming technique, we investigated stem allomorphs of German verbs that encode multiple morphosyntactic features. The results revealed a striking AoA modulation of observed priming patterns, indicating efficient access to morphosyntactic features for early AoAs and a gradual decline with increasing AoAs. In addition, we found a discontinuity in the function relating AoA to morphosyntactic feature access, suggesting a sensitive period for the development of morphosyntax. Y1 - 2019 U6 - https://doi.org/10.1080/10489223.2019.1570204 SN - 1048-9223 SN - 1532-7817 VL - 26 IS - 3 SP - 339 EP - 360 PB - Routledge, Taylor & Francis Group CY - Abingdon ER - TY - JOUR A1 - Noonan, Michael J. A1 - Tucker, Marlee A. A1 - Fleming, Christen H. A1 - Akre, Thomas S. A1 - Alberts, Susan C. A1 - Ali, Abdullahi H. A1 - Altmann, Jeanne A1 - Antunes, Pamela Castro A1 - Belant, Jerrold L. A1 - Beyer, Dean A1 - Blaum, Niels A1 - Boehning-Gaese, Katrin A1 - Cullen Jr, Laury A1 - de Paula, Rogerio Cunha A1 - Dekker, Jasja A1 - Drescher-Lehman, Jonathan A1 - Farwig, Nina A1 - Fichtel, Claudia A1 - Fischer, Christina A1 - Ford, Adam T. A1 - Goheen, Jacob R. A1 - Janssen, Rene A1 - Jeltsch, Florian A1 - Kauffman, Matthew A1 - Kappeler, Peter M. A1 - Koch, Flavia A1 - LaPoint, Scott A1 - Markham, A. Catherine A1 - Medici, Emilia Patricia A1 - Morato, Ronaldo G. A1 - Nathan, Ran A1 - Oliveira-Santos, Luiz Gustavo R. A1 - Olson, Kirk A. A1 - Patterson, Bruce D. A1 - Paviolo, Agustin A1 - Ramalho, Emiliano Estero A1 - Rosner, Sascha A1 - Schabo, Dana G. A1 - Selva, Nuria A1 - Sergiel, Agnieszka A1 - da Silva, Marina Xavier A1 - Spiegel, Orr A1 - Thompson, Peter A1 - Ullmann, Wiebke A1 - Zieba, Filip A1 - Zwijacz-Kozica, Tomasz A1 - Fagan, William F. A1 - Mueller, Thomas A1 - Calabrese, Justin M. T1 - A comprehensive analysis of autocorrelation and bias in home range estimation JF - Ecological monographs : a publication of the Ecological Society of America. N2 - Home range estimation is routine practice in ecological research. While advances in animal tracking technology have increased our capacity to collect data to support home range analysis, these same advances have also resulted in increasingly autocorrelated data. Consequently, the question of which home range estimator to use on modern, highly autocorrelated tracking data remains open. This question is particularly relevant given that most estimators assume independently sampled data. Here, we provide a comprehensive evaluation of the effects of autocorrelation on home range estimation. We base our study on an extensive data set of GPS locations from 369 individuals representing 27 species distributed across five continents. We first assemble a broad array of home range estimators, including Kernel Density Estimation (KDE) with four bandwidth optimizers (Gaussian reference function, autocorrelated‐Gaussian reference function [AKDE], Silverman's rule of thumb, and least squares cross‐validation), Minimum Convex Polygon, and Local Convex Hull methods. Notably, all of these estimators except AKDE assume independent and identically distributed (IID) data. We then employ half‐sample cross‐validation to objectively quantify estimator performance, and the recently introduced effective sample size for home range area estimation ( N̂ area ) to quantify the information content of each data set. We found that AKDE 95% area estimates were larger than conventional IID‐based estimates by a mean factor of 2. The median number of cross‐validated locations included in the hold‐out sets by AKDE 95% (or 50%) estimates was 95.3% (or 50.1%), confirming the larger AKDE ranges were appropriately selective at the specified quantile. Conversely, conventional estimates exhibited negative bias that increased with decreasing N̂ area. To contextualize our empirical results, we performed a detailed simulation study to tease apart how sampling frequency, sampling duration, and the focal animal's movement conspire to affect range estimates. Paralleling our empirical results, the simulation study demonstrated that AKDE was generally more accurate than conventional methods, particularly for small N̂ area. While 72% of the 369 empirical data sets had >1,000 total observations, only 4% had an N̂ area >1,000, where 30% had an N̂ area <30. In this frequently encountered scenario of small N̂ area, AKDE was the only estimator capable of producing an accurate home range estimate on autocorrelated data. KW - animal movement KW - kernel density estimation KW - local convex hull KW - minimum convex polygon KW - range distribution KW - space use KW - telemetry KW - tracking data Y1 - 2018 U6 - https://doi.org/10.1002/ecm.1344 SN - 0012-9615 SN - 1557-7015 VL - 89 IS - 2 PB - Wiley CY - Hoboken ER - TY - JOUR A1 - Schmidt, Thomas A1 - Cioni, Maria-Rosa L. A1 - Niederhofer, Florian A1 - Bekki, Kenji A1 - Bell, Cameron P. M. A1 - de Grijs, Richard A1 - El Youssoufi, Dalal A1 - Ivanov, Valentin D. A1 - Oliveira, Joana M. A1 - Ripepi, Vincenzo A1 - van Loon, Jacco Th. T1 - The VMC survey: XLV. Proper motion of the outer LMC and the impact of the SMC JF - Astronomy and astrophysics N2 - Context. The Large Magellanic Cloud (LMC) is the most luminous satellite galaxy of the Milky Way and, owing to its companion, the Small Magellanic Cloud (SMC), represents an excellent laboratory to study the interaction of dwarf galaxies. Aims. The aim of this study is to investigate the kinematics of the outer regions of the LMC by using stellar proper motions to understand the impact of interactions, for example with the SMC about 250 Myr ago. Methods. We calculate proper motions using multi-epoch K s -band images from the VISTA survey of the Magellanic Cloud system (VMC). Observations span a time baseline of 2-5 yr. We combine the VMC data with data from the Gaia Early Data Release 3 and introduce a new method to distinguish between Magellanic and Milky Way stars based on a machine learning algorithm. This new technique enables a larger and cleaner sample selection of fainter sources as it reaches below the red clump of the LMC. Results. We investigate the impact of the SMC on the rotational field of the LMC and find hints of stripped SMC debris. The southeastern region of the LMC shows a slow rotational speed compared to the overall rotation. N-body simulations suggest that this could be caused by a fraction of stripped SMC stars located in that particular region that move opposite to the expected rotation. KW - Galaxy: kinematics and dynamics KW - Magellanic Clouds KW - galaxies: KW - interactions KW - proper motions KW - surveys Y1 - 2022 U6 - https://doi.org/10.1051/0004-6361/202142148 SN - 0004-6361 SN - 1432-0746 VL - 663 PB - EDP Sciences CY - Les Ulis ER - TY - JOUR A1 - Lago Huvelle, Maria Sol A1 - Felser, Claudia T1 - Agreement attraction in native and nonnative speakers of German JF - Applied psycholinguistics : psychological and linguistic studies across languages and learners N2 - Second language speakers often struggle to apply grammatical constraints such as subject-verb agreement. One hypothesis for this difficulty is that it results from problems suppressing syntactically unlicensed constituents in working memory. We investigated which properties of these constituents make them more likely to elicit errors: their grammatical distance to the subject head or their linear distance to the verb. We used double modifier constructions (e.g., the smell of the stables of the farmers), where the errors of native speakers are modulated by the linguistic relationships between the nouns in the subject phrase: second plural nouns, which are syntactically and semantically closer to the subject head, elicit more errors than third plural nouns, which are linearly closer to the verb (2nd-3rd-noun asymmetry). In order to dissociate between grammatical and linear distance, we compared embedded and coordinated modifiers, which were linearly identical but differed in grammatical distance. Using an attraction paradigm, we showed that German native speakers and proficient Russian speakers of German exhibited similar attraction rates and that their errors displayed a 2nd-3rd-noun asymmetry, which was more pronounced in embedded than in coordinated constructions. We suggest that both native and second language learners prioritize linguistic structure over linear distance in their agreement computations. KW - agreement attraction KW - German KW - linear distance KW - Russian Y1 - 2018 U6 - https://doi.org/10.1017/S0142716417000601 SN - 0142-7164 SN - 1469-1817 VL - 39 IS - 3 SP - 619 EP - 647 PB - Cambridge Univ. Press CY - New York ER - TY - JOUR A1 - Sini, Gjergji A1 - Schubert, Marcel A1 - Risko, Chad A1 - Roland, Steffen A1 - Lee, Olivia P. A1 - Chen, Zhihua A1 - Richter, Thomas V. A1 - Dolfen, Daniel A1 - Coropceanu, Veaceslav A1 - Ludwigs, Sabine A1 - Scherf, Ullrich A1 - Facchetti, Antonio A1 - Frechet, Jean M. J. A1 - Neher, Dieter T1 - On the Molecular Origin of Charge Separation at the Donor-Acceptor Interface JF - Advanced energy materials N2 - Fullerene-based acceptors have dominated organic solar cells for almost two decades. It is only within the last few years that alternative acceptors rival their dominance, introducing much more flexibility in the optoelectronic properties of these material blends. However, a fundamental physical understanding of the processes that drive charge separation at organic heterojunctions is still missing, but urgently needed to direct further material improvements. Here a combined experimental and theoretical approach is used to understand the intimate mechanisms by which molecular structure contributes to exciton dissociation, charge separation, and charge recombination at the donor-acceptor (D-A) interface. Model systems comprised of polythiophene-based donor and rylene diimide-based acceptor polymers are used and a detailed density functional theory (DFT) investigation is performed. The results point to the roles that geometric deformations and direct-contact intermolecular polarization play in establishing a driving force ( energy gradient) for the optoelectronic processes taking place at the interface. A substantial impact for this driving force is found to stem from polymer deformations at the interface, a finding that can clearly lead to new design approaches in the development of the next generation of conjugated polymers and small molecules. KW - donor-acceptor interfaces KW - energy gradients KW - geometrical deformations KW - nonfullerene acceptors KW - organic photovoltaics KW - photocurrent generation KW - polymer solar cells Y1 - 2018 U6 - https://doi.org/10.1002/aenm.201702232 SN - 1614-6832 SN - 1614-6840 VL - 8 IS - 12 PB - Wiley-VCH CY - Weinheim ER -