TY  - JOUR
A1  - Donges, Jonathan
A1  - Donner, Reik Volker
A1  - Trauth, Martin H.
A1  - Marwan, Norbert
A1  - Schellnhuber, Hans Joachim
A1  - Kurths, Jürgen
T1  - Nonlinear detection of paleoclimate-variability transitions possibly related to human evolution
JF  - Proceedings of the National Academy of Sciences of the United States of America
N2  - Potential paleoclimatic driving mechanisms acting on human evolution present an open problem of cross-disciplinary scientific interest. The analysis of paleoclimate archives encoding the environmental variability in East Africa during the past 5 Ma has triggered an ongoing debate about possible candidate processes and evolutionary mechanisms. In this work, we apply a nonlinear statistical technique, recurrence network analysis, to three distinct marine records of terrigenous dust flux. Our method enables us to identify three epochs with transitions between qualitatively different types of environmental variability in North and East Africa during the (i) Middle Pliocene (3.35-3.15 Ma B. P.), (ii) Early Pleistocene (2.25-1.6 Ma B. P.), and (iii) Middle Pleistocene (1.1-0.7 Ma B. P.). A deeper examination of these transition periods reveals potential climatic drivers, including (i) large-scale changes in ocean currents due to a spatial shift of the Indonesian throughflow in combination with an intensification of Northern Hemisphere glaciation, (ii) a global reorganization of the atmospheric Walker circulation induced in the tropical Pacific and Indian Ocean, and (iii) shifts in the dominating temporal variability pattern of glacial activity during the Middle Pleistocene, respectively. A reexamination of the available fossil record demonstrates statistically significant coincidences between the detected transition periods and major steps in hominin evolution. This result suggests that the observed shifts between more regular and more erratic environmental variability may have acted as a trigger for rapid change in the development of humankind in Africa.
KW  - African climate
KW  - Plio-Pleistocene
KW  - climate-driven evolution
KW  - dynamical transitions
KW  - nonlinear time series analysis
Y1  - 2011
U6  - https://doi.org/10.1073/pnas.1117052108
SN  - 0027-8424
VL  - 108
IS  - 51
SP  - 20422
EP  - 20427
PB  - National Acad. of Sciences
CY  - Washington
ER  - 
TY  - JOUR
A1  - DiGuglielmo, J.
A1  - Samblowski, A.
A1  - Hage, B.
A1  - Pineda, Carlos
A1  - Eisert, Jens
A1  - Schnabel, R.
T1  - Experimental Unconditional Preparation and Detection of a Continuous Bound Entangled State of Light
JF  - Physical review letters
N2  - Among the possibly most intriguing aspects of quantum entanglement is that it comes in free and bound instances. The existence of bound entangled states certifies an intrinsic irreversibility of entanglement in nature and suggests a connection with thermodynamics. In this Letter, we present a first unconditional, continuous-variable preparation and detection of a bound entangled state of light. We use convex optimization to identify regimes rendering its bound character well certifiable, and continuously produce a distributed bound entangled state with an extraordinary and unprecedented significance of more than 10 standard deviations away from both separability and distillability. Our results show that the approach chosen allows for the efficient and precise preparation of multimode entangled states of light with various applications in quantum information, quantum state engineering, and high precision metrology.
Y1  - 2011
U6  - https://doi.org/10.1103/PhysRevLett.107.240503
SN  - 0031-9007
VL  - 107
IS  - 24
PB  - American Physical Society
CY  - College Park
ER  - 
TY  - JOUR
A1  - Delahaye, T.
A1  - Fiasson, A.
A1  - Pohl, Martin
A1  - Salati, P.
T1  - The GeV-TeV Galactic gamma-ray diffuse emission I. Uncertainties in the predictions of the hadronic component
JF  - Astronomy and astrophysics : an international weekly journal
N2  - Context. The Galactic gamma-ray diffuse emission is currently observed in the GeV-TeV energy range with unprecedented accuracy by the Fermi satellite. Understanding this component is crucial because it provides a background to many different signals, such as extragalactic sources or annihilating dark matter. It is timely to reinvestigate how it is calculated and to assess the various uncertainties that are likely to affect the accuracy of the predictions.
 Aims. The Galactic gamma-ray diffuse emission is mostly produced above a few GeV by the interactions of cosmic ray primaries impinging on the interstellar material. The theoretical error on that component is derived by exploring various potential sources of uncertainty. Particular attention is paid to cosmic ray propagation. Nuclear cross sections, the proton and helium fluxes at the Earth's position, the Galactic radial profile of supernova remnants, and the hydrogen distribution can also severely affect the signal.
 Methods. The propagation of cosmic ray species throughout the Galaxy is described in the framework of a semi-analytic two-zone diffusion/convection model. The gamma-ray flux is reliably and quickly determined. This allows conversion of the constraints set by the boron-to-carbon data into a theoretical uncertainty on the diffuse emission. New deconvolutions of the HI and CO sky maps are also used to get the hydrogen distribution within the Galaxy.
 Results. The thickness of the cosmic ray diffusive halo is found to have a significant effect on the Galactic gamma-ray diffuse emission, while the interplay between diffusion and convection has little influence on the signal. The uncertainties related to nuclear cross sections and to the primary cosmic ray fluxes at the Earth are significant. The radial distribution of supernova remnants along the Galactic plane turns out to be a key ingredient. As expected, the predictions are extremely sensitive to the spatial distribution of hydrogen within the Milky Way.
 Conclusions. Most of the sources of uncertainty are likely to be reduced in the near future. The stress should be put (i) on better determination of the thickness of the cosmic ray diffusive halo; and (ii) on refined observations of the radial profile of supernova remnants.
KW  - gamma rays: diffuse background
KW  - cosmic rays
KW  - methods: analytical
KW  - gamma rays: ISM
Y1  - 2011
U6  - https://doi.org/10.1051/0004-6361/201116647
SN  - 0004-6361
VL  - 531
IS  - 4
PB  - EDP Sciences
CY  - Les Ulis
ER  - 
TY  - JOUR
A1  - Cockburn, S. P.
A1  - Negretti, Antonio
A1  - Proukakis, N. P.
A1  - Henkel, Carsten
T1  - Comparison between microscopic methods for finite-temperature Bose gases
JF  - Physical review : A, Atomic, molecular, and optical physics
N2  - We analyze the equilibrium properties of a weakly interacting, trapped quasi-one-dimensional Bose gas at finite temperatures and compare different theoretical approaches. We focus in particular on two stochastic theories: a number-conserving Bogoliubov (NCB) approach and a stochastic Gross-Pitaevskii equation (SGPE) that have been extensively used in numerical simulations. Equilibrium properties like density profiles, correlation functions, and the condensate statistics are compared to predictions based upon a number of alternative theories. We find that due to thermal phase fluctuations, and the corresponding condensate depletion, the NCB approach loses its validity at relatively low temperatures. This can be attributed to the change in the Bogoliubov spectrum, as the condensate gets thermally depleted, and to large fluctuations beyond perturbation theory. Although the two stochastic theories are built on different thermodynamic ensembles (NCB, canonical; SGPE, grand-canonical), they yield the correct condensate statistics in a large Bose-Einstein condensate (BEC) (strong enough particle interactions). For smaller systems, the SGPE results are prone to anomalously large number fluctuations, well known for the grand-canonical, ideal Bose gas. Based on the comparison of the above theories to the modified Popov approach, we propose a simple procedure for approximately extracting the Penrose-Onsager condensate from first-and second-order correlation functions that is both computationally convenient and of potential use to experimentalists. This also clarifies the link between condensate and quasicondensate in the Popov theory of low-dimensional systems.
Y1  - 2011
U6  - https://doi.org/10.1103/PhysRevA.83.043619
SN  - 1050-2947
SN  - 1094-1622
VL  - 83
IS  - 4
PB  - American Physical Society
CY  - College Park
ER  - 
TY  - JOUR
A1  - Campbell, Earl T.
T1  - Catalysis and activation of magic states in fault-tolerant architectures
JF  - Physical review : A, Atomic, molecular, and optical physics
N2  - In many architectures for fault-tolerant quantum computing universality is achieved by a combination of Clifford group unitary operators and preparation of suitable nonstabilizer states, the so-called magic states. Universality is possible even for some fairly noisy nonstabilizer states, as distillation can convert many noisy copies into fewer purer magic states. Here we propose protocols that exploit multiple species of magic states in surprising ways. These protocols provide examples of previously unobserved phenomena that are analogous to catalysis and activation well known in entanglement theory.
Y1  - 2011
U6  - https://doi.org/10.1103/PhysRevA.83.032317
SN  - 1050-2947
VL  - 83
IS  - 3
PB  - American Physical Society
CY  - College Park
ER  - 
TY  - JOUR
A1  - Burylko, Oleksandr
A1  - Pikovskij, Arkadij
T1  - Desynchronization transitions in nonlinearly coupled phase oscillators
JF  - Physica :D, Nonlinear phenomena
N2  - We consider the nonlinear extension of the Kuramoto model of globally coupled phase oscillators where the phase shift in the coupling function depends on the order parameter. A bifurcation analysis of the transition from fully synchronous state to partial synchrony is performed. We demonstrate that for small ensembles it is typically mediated by stable cluster states, that disappear with creation of heteroclinic cycles, while for a larger number of oscillators a direct transition from full synchrony to a periodic or a quasiperiodic regime occurs.
KW  - Coupled oscillators
KW  - Oscillator ensembles
KW  - Kuramoto model
KW  - Nonlinear coupling
KW  - Bifurcations
Y1  - 2011
U6  - https://doi.org/10.1016/j.physd.2011.05.016
SN  - 0167-2789
VL  - 240
IS  - 17
SP  - 1352
EP  - 1361
PB  - Elsevier
CY  - Amsterdam
ER  - 
TY  - BOOK
A1  - Brehmer, Ludwig
T1  - Die Brandeburgische Landeshochschule zu Potsdam im Jahre eins : die Hochschule in Potsdamer Schulen ; Daten und Fakten ; Kommentare und Dokumente
Y1  - 2011
SN  - 978-3-00-034135-9
VL  - 4
PB  - Eigenverl. des Verf
CY  - Potsdam
ER  - 
TY  - JOUR
A1  - Brandao, F. G. S. L.
A1  - Eisert, Jens
A1  - Horodecki, M.
A1  - Yang, Dong
T1  - Entangled inputs cannot make imperfect quantum channels perfect
JF  - Physical review letters
N2  - Entangled inputs can enhance the capacity of quantum channels, this being one of the consequences of the celebrated result showing the nonadditivity of several quantities relevant for quantum information science. In this work, we answer the converse question (whether entangled inputs can ever render noisy quantum channels to have maximum capacity) to the negative: No sophisticated entangled input of any quantum channel can ever enhance the capacity to the maximum possible value, a result that holds true for all channels both for the classical as well as the quantum capacity. This result can hence be seen as a bound as to how "nonadditive quantum information can be.'' As a main result, we find first practical and remarkably simple computable single-shot bounds to capacities, related to entanglement measures. As examples, we discuss the qubit amplitude damping and identify the first meaningful bound for its classical capacity.
Y1  - 2011
U6  - https://doi.org/10.1103/PhysRevLett.106.230502
SN  - 0031-9007
VL  - 106
IS  - 23
PB  - American Physical Society
CY  - College Park
ER  - 
TY  - THES
A1  - Boeche, Corrado
T1  - Chemical gradients in the Milky Way from unsupervised chemical abundances measurements of the RAVE spectroscopic data set
T1  - Chemische Gradienten in der Milchstraße aus unüberwachten chemischen Häufigkeitsmessungen aus dem RAVE spektroskopischen Datenset
N2  - The present thesis was born and evolved within the RAdial Velocity Experiment (RAVE) with the goal of measuring chemical abundances from the RAVE spectra and exploit them to investigate the chemical gradients along the plane of the Galaxy to provide constraints on possible Galactic formation scenarios. RAVE is a large spectroscopic survey which aims to observe spectroscopically ~10^6 stars by the end of 2012 and measures their radial velocities, atmospheric parameters and chemical abundances. The project makes use of the UK Schmidt telescope at Australian Astronomical Observatory (AAO) in Siding Spring, Australia, equipped with the multiobject spectrograph 6dF. To date, RAVE collected and measured more than 450,000 spectra. The precision of the chemical abundance estimations depends on the reliability of the atomic and atmosphere parameters adopted (in particular the oscillator strengths of the absorption lines and the effective temperature, gravity, and metallicity of the stars measured). Therefore we first identified 604 absorption lines in the RAVE wavelength range and refined their oscillator strengths with an inverse spectral analysis. Then, we improved the RAVE stellar parameters by modifying the RAVE pipeline and the spectral library the pipeline rely on. The modifications removed some systematic errors in stellar parameters discovered during this work. To obtain chemical abundances, we developed two different processing pipelines. Both of them perform chemical abundances measurements by assuming stellar atmospheres in Local Thermodynamic Equilibrium (LTE). The first one determines elements abundances from equivalent widths of absorption lines. Since this pipeline showed poor sensibility on abundances relative to iron, it has been superseded. The second one exploits the chi^2 minimization technique between observed and model spectra. Thanks to its precision, it has been adopted for the creation of the RAVE chemical catalogue. This pipeline provides abundances with uncertains of about ~0.2dex for spectra with signal-to-noise ratio S/N>40 and ~0.3dex for spectra with 20>S/N>40. For this work, the pipeline measured chemical abundances up to 7 elements for 217,358 RAVE stars. With these data we investigated the chemical gradients along the Galactic radius of the Milky Way. We found that stars with low vertical velocities |W| (which stay close to the Galactic plane) show an iron abundance gradient in agreement with previous works (~-0.07$ dex kpc^-1) whereas stars with larger |W| which are able to reach larger heights above the Galactic plane, show progressively flatter gradients. The gradients of the other elements follow the same trend. This suggests that an efficient radial mixing acts in the Galaxy or that the thick disk formed from homogeneous interstellar matter. In particular, we found hundreds of stars which can be kinetically classified as thick disk stars exhibiting a chemical composition typical of the thin disk. A few stars of this kind have already been detected by other authors, and their origin is still not clear. One possibility is that they are thin disk stars kinematically heated, and then underwent an efficient radial mixing process which blurred (and so flattened) the gradient. Alternatively they may be a transition population" which represents an evolutionary bridge between thin and thick disk. Our analysis shows that the two explanations are not mutually exclusive. Future follow-up high resolution spectroscopic observations will clarify their role in the Galactic disk evolution.
N2  - Die vorliegende Doktorarbeit wurde im Rahmen des RAdial Velocity Experiment (RAVE) angefertigt. Ihr Ziel ist es, chemische Elementhäufigkeiten an RAVE-Spektren zu messen und zur Untersuchung chemischer Gradienten in der Milchstrassenebene zu benutzen, um verschieden Szenarien der Galaxienentstehung einzugrenzen. RAVE ist eine große spektrokopische Durchmusterung, deren Ziel es ist, bis zum Ende des Jahres 2012 insgesamt 10^6 Sterne zu spektroskopieren, um deren Radialgeschwindigkeiten, sternatmosphärische Parameter und chemische Häufigkeiten zu messen. Das Projekt benutzt das UK Schmidt Teleskop am Australian Astronomical Observatory (AAO) in Siding Spring, Australien, welches mit dem Multiobjekt-Spektrographen 6dF bestückt ist. Bis heute hat RAVE die Spektren von mehr als 450,000 Sternen gesammelt und untersucht. Die Genauigkeit, mit der die Elementhäufigkeiten abgeschätzt werden können, hängt von der Zuverlässigkeit der verwendeten Parameter, (insbesondere der Oszillatorstärken der Absorptionslinien sowie von der effektiven Temperatur, Schwerebeschleunigung und der Metallizität des gemessenen Sterns) ab. Daher identifizierten wir zunächst 604 Absorptionslinien im Wellenlängenbereich von RAVE und verbesserten deren Oszillatorstärken durch eine inverse Spektralanalyse. Dann wurden die stellaren Parameter von RAVE verbessert, indem die RAVE Pipeline und die stellaren Parameter, auf denen sie beruht, modifiziert wurden. Die Änderungen eliminierten einen Teil der systematischen Fehler von stellaren Parametern, die im Laufe dieser Arbeit gefunden wurden. Um Elementhäufigkeiten zu bestimmen, haben wir zwei verschiedene Prozessierungs-Pipelines entwickelt. Beide berechnen die Elementhäufigkeiten unter der Annahme von Sternatmosphären im lokalen thermischen Gleichgewicht (local thermal equilibrium, LTE). Die erste Pipeline berechnete Elemenhäufigkeiten anhand der Äquivalentbreiten von Absorptionslinien. Da diese Methode eine geringe Empfindlichkeit für die Elementhäufigeiten relativ zu Eisen erreichte, wurde sie ersetzt. Die neue Pipeline benutzt chi^2-Fits von Modellspektren an die beobachteten Spektren. Dank Ihrer Präzision wurde diese für die Erstellung des RAVE-Katalogs von Elementhäufigkeiten verwendet. Diese Pipeline liefert Elementhäufigkeiten mit einer Genauigkeit von ~0.2dex, während für Spektren mit 20>S/N>40 immerhin noch ~0.3dex Genauigkeit erreicht werden. Für die vorliegende Arbeit wurden für 217.358 Sterne die Häufigkeiten von sieben chemischen Elementen bestimmt. Mit diesen Daten wurde der radiale chemische Gradient unserer Milchstraße untersucht. Wir finden, dass Sterne mit kleinen vertikalen Geschwindigkeiten |W|, die also nahe der galaktischen Ebene bleiben, einen radialen Gradienten der Eisenhäufigkeit zeigen, der mit früheren Studien übereinstimmt (~-0.07 dex Kpc^-1), während Sterne mit großen |W|, also solche, die größere galaktische Höhen erreichen, einen progressiv flachere Gradienten zeigen. Die Gradienten der anderen Element folgen dem gleichen Trend. Das lässt darauf schließen, dass entweder die Durchmischung der galaktischen dicken Scheibe effizient arbeitet oder aber dass die dicke Scheibe aus interstellarer Materie gebildet wurde, die chemisch recht homogen war. Speziell fanden wir hunderte von Sternen, die zwar kinematisch als zur dicken Scheibe zugehörig klassifiziert werden können, die aber die typische chemische Zusammensetzung der dünnen Scheibe aufweisen. Einige wenige dieser Sterne wurden bereits von anderen Autoren entdeckt, aber ihre Herkunft bleibt immer noch unklar. Eine Möglichkeit ist, dass die Sterne der dünnen Scheibe kinematische geheizt werden, sodass sie effizienter radial gemischt werden, was die chemischen Gradienten verwischt und auch flacher macht. Alternativ dazu könnten diese Sterne einer "Übergangspopulation" angehören, welche hinsichtlich der Scheibenevolution die Verbindung zwischen der dünnen und der dicken Scheibe darstellt. Unsere Untersuchung zeigt, dass sich diese beiden Erklärungen gegenseitig nicht ausschließen. Künftige Nachspektroskopierung mit hoher Auflösung wird die Rolle dieser Sterne in der Entwicklungsgeschichte der galaktischen Scheibe aufklären.
KW  - Galaxie
KW  - Milchstraße
KW  - Spektroskopie
KW  - chemische Häufigkeiten
KW  - Galaxy
KW  - Milky Way
KW  - Spectroscopy
KW  - Chemical Abundances
Y1  - 2011
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus-52478
ER  - 
TY  - JOUR
A1  - Blakesley, James C.
A1  - Schubert, Marcel
A1  - Steyrleuthner, Robert
A1  - Chen, Zhihua
A1  - Facchetti, Antonio
A1  - Neher, Dieter
T1  - Time-of-flight measurements and vertical transport in a high electron-mobility polymer
JF  - Applied physics letters
N2  - We investigate charge transport in a high-electron mobility polymer, poly(N, N-bis 2-octyldodecyl-naphthalene-1,4,5,8-bis dicarboximide-2,6-diyl-alt-5,5-2,2-bithiophene) [P(NDI2OD-T2), Polyera ActivInk (TM) N2200]. Time-of-flight measurements reveal electron mobilities approaching those measured in field-effect transistors, the highest ever recorded in a conjugated polymer using this technique. The modest temperature dependence and weak dispersion of the transients indicate low energetic disorder in this material. Steady-state electron-only current measurements reveal a barrier to injection of about 300 meV. We propose that this barrier is located within the P(NDI2OD-T2) film and arises from molecular orientation effects.
Y1  - 2011
U6  - https://doi.org/10.1063/1.3657827
SN  - 0003-6951
VL  - 99
IS  - 18
PB  - American Institute of Physics
CY  - Melville
ER  - 
TY  - JOUR
A1  - Blakesley, James C.
A1  - Neher, Dieter
T1  - Relationship between energetic disorder and open-circuit voltage in bulk heterojunction organic solar cells
JF  - Physical review : B, Condensed matter and materials physics
N2  - We simulate organic bulk heterojunction solar cells. The effects of energetic disorder are incorporated through a Gaussian or exponential model of density of states. Analytical models of open-circuit voltage (V(OC)) are derived from the splitting of quasi-Fermi potentials. Their predictions are backed up by more complex numerical device simulations including effects such as carrier-density-dependent charge-carrier mobilities. It is predicted that the V(OC) depends on: (1) the donor-acceptor energy gap; (2) charge-carrier recombination rates; (3) illumination intensity; (4) the contact work functions (if not in the pinning regime); and (5) the amount of energetic disorder. A large degree of energetic disorder, or a high density of traps, is found to cause significant reductions in V(OC). This can explain why V(OC) is often less than expected in real devices. Energetic disorder also explains the nonideal temperature and intensity dependence of V(OC) and the superbimolecular recombination rates observed in many real bulk heterojunction solar cells.
Y1  - 2011
U6  - https://doi.org/10.1103/PhysRevB.84.075210
SN  - 1098-0121
VL  - 84
IS  - 7
PB  - American Physical Society
CY  - College Park
ER  - 
TY  - JOUR
A1  - Blaha, Karen A.
A1  - Pikovskij, Arkadij
A1  - Rosenblum, Michael
A1  - Clark, Matthew T.
A1  - Rusin, Craig G.
A1  - Hudson, John L.
T1  - Reconstruction of two-dimensional phase dynamics from experiments on coupled oscillators
JF  - Physical review : E, Statistical, nonlinear and soft matter physics
N2  - Phase models are a powerful method to quantify the coupled dynamics of nonlinear oscillators from measured data. We use two phase modeling methods to quantify the dynamics of pairs of coupled electrochemical oscillators, based on the phases of the two oscillators independently and the phase difference, respectively. We discuss the benefits of the two-dimensional approach relative to the one-dimensional approach using phase difference. We quantify the dependence of the coupling functions on the coupling magnitude and coupling time delay. We show differences in synchronization predictions of the two models using a toy model. We show that the two-dimensional approach reveals behavior not detected by the one-dimensional model in a driven experimental oscillator. This approach is broadly applicable to quantify interactions between nonlinear oscillators, especially where intrinsic oscillator sensitivity and coupling evolve with time.
Y1  - 2011
U6  - https://doi.org/10.1103/PhysRevE.84.046201
SN  - 1539-3755
VL  - 84
IS  - 4
PB  - American Physical Society
CY  - College Park
ER  - 
TY  - THES
A1  - Bierbaum, Veronika
T1  - Chemomechanical coupling and motor cycles of the molecular motor myosin V
T1  - Chemomechanische Kopplung und Motorzyklen für den molekularen Motor Myosin V
N2  - In the living cell, the organization of the complex internal structure relies to a large extent on molecular motors. Molecular motors are proteins that are able to convert chemical energy from the hydrolysis of adenosine triphosphate (ATP) into mechanical work. Being about 10 to 100 nanometers in size, the molecules act on a length scale, for which thermal collisions have a considerable impact onto their motion. In this way, they constitute paradigmatic examples of thermodynamic machines out of equilibrium. This study develops a theoretical description for the energy conversion by the molecular motor myosin V, using many different aspects of theoretical physics. Myosin V has been studied extensively in both bulk and single molecule experiments. Its stepping velocity has been characterized as a function of external control parameters such as nucleotide concentration and applied forces. In addition, numerous kinetic rates involved in the enzymatic reaction of the molecule have been determined. For forces that exceed the stall force of the motor, myosin V exhibits a 'ratcheting' behaviour: For loads in the direction of forward stepping, the velocity depends on the concentration of ATP, while for backward loads there is no such influence. Based on the chemical states of the motor, we construct a general network theory that incorporates experimental observations about the stepping behaviour of myosin V. The motor's motion is captured through the network description supplemented by a Markov process to describe the motor dynamics. This approach has the advantage of directly addressing the chemical kinetics of the molecule, and treating the mechanical and chemical processes on equal grounds. We utilize constraints arising from nonequilibrium thermodynamics to determine motor parameters and demonstrate that the motor behaviour is governed by several chemomechanical motor cycles. In addition, we investigate the functional dependence of stepping rates on force by deducing the motor's response to external loads via an appropriate Fokker-Planck equation. For substall forces, the dominant pathway of the motor network is profoundly different from the one for superstall forces, which leads to a stepping behaviour that is in agreement with the experimental observations. The extension of our analysis to Markov processes with absorbing boundaries allows for the calculation of the motor's dwell time distributions. These reveal aspects of the coordination of the motor's heads and contain direct information about the backsteps of the motor. Our theory provides a unified description for the myosin V motor as studied in single motor experiments.
N2  - Die hier vorgelegte Arbeit entwickelt unter Verwendung vieler verschiedener Aspekte der statistischen Physik eine Theorie der chemomechanischen Kopplung für den Energieumsatz des molekularen Motors Myosin V. Das Myosin V ist sowohl in chemokinetischen wie in Einzelmolekülexperimenten grundlegend untersucht worden. Seine Schrittgeschwindigkeit ist in Abhängigkeit verschiedener externer Parameter, wie der Nukleotidkonzentration und einer äußeren Kraft, experimentell bestimmt. Darüber hinaus ist eine große Anzahl verschiedener chemokinetischer Raten, die an der enzymatischen Reaktion des Moleküls beteiligt sind, quantitativ erfasst. Unter der Wirkung externer Kräfte, die seine Anhaltekraft überschreiten, verhält sich der Motor wie eine Ratsche: Für Kräfte, die entlang der Schrittbewegung des Motors wirken, hängt seine Geschwindigkeit von der ATP-Konzentration ab, für rückwärts angreifende Kräfte jedoch ist die Bewegung des Motors unabhängig von ATP. Auf der Grundlage der chemischen Zustände des Motors wird eine Netzwerktheorie aufgebaut, die die experimentellen Beobachtungen des Schrittverhaltens für Myosin V einschließt. Diese Netzwerkbeschreibung dient als Grundlage für einen Markovprozess, der die Dynamik des Motors beschreibt. Die Verwendung diskreter Zustände bietet den Vorteil der direkten Erfassung der chemischen Kinetik des Moleküls. Darüber hinaus werden chemische und mechanische Eigenschaften des Motors in gleichem Maße im Modell berücksichtigt. Durch die Erfassung der Enzymkinetik mittels eines stochastischen Prozesses lässt sich die Motordynamik mit Hilfe des stationären Zustands der Netzwerkdarstellung beschreiben. Um diesen zu bestimmen, verwenden wir eine graphentheoretische Methode, die auf Kirchhoff zurückgreift. Wir zeigen in Einklang mit den Gesetzen der Thermodynamik für Nichtgleichgewichtssysteme, dass das Schrittverhalten des Motors von mehreren chemomechanischen Zyklen beeinflusst wird. Weiterhin untersuchen wir das funktionale Verhalten mechanischer Schrittraten in Abhängigkeit der äußeren Kraft unter Verwendung einer geeigneten Fokker-Planck-Gleichung. Hierfür wird auf die Theorie einer kontinuierlichen Beschreibung von molekularen Methoden zurückgegriffen. Wir berechnen Größen wie die mittlere Schrittgeschwindigkeit, das Verhältnis von Vorwärts- und Rückwärtsschritten, und die Lauflänge des Motors in Abhängigkeit einer äußeren angreifenden Kraft sowie der Nukleotidkonzentration, und vergleichen diese mit experimentellen Daten. Für Kräfte, die kleiner als die Anhaltekraft des Motors sind, unterscheidet sich der chemomechanische Zyklus grundlegend von demjenigen, der für große Kräfte dominiert. Diese Eigenschaft resultiert in einem Schrittverhalten, das mit den experimentellen Beobachtungen übereinstimmt. Es ermöglicht weiterhin die Zerlegung des Netzwerks in einzelne Zyklen, die die Bewegung des Motors für verschiedene Bereiche externer Kräfte erfassen. Durch die Erweiterung unseres Modells auf Markovprozesse mit absorbierenden Zuständen können so die Wartezeitenverteilungen für einzelne Zyklen des Motors analytisch berechnet werden. Sie erteilen Aufschluss über die Koordination des Motors und enthalten zudem direkte Informationen über seine Rückwärtsschritte, die experimentell nicht erfasst sind. Für das gesamte Netzwerk werden die Wartezeitenverteilungen mit Hilfe eines Gillespie-Algorithmus bestimmt. Unsere Theorie liefert eine einheitliche Beschreibung der Eigenschaften von Myosin V, die in Einzelmolekülexperimenten erfasst werden können.
KW  - statistische Physik
KW  - Markov-Prozesse
KW  - molekulare Motoren
KW  - statistical physics
KW  - markov processes
KW  - molecular motors
Y1  - 2011
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus-53614
ER  - 
TY  - JOUR
A1  - Beye, Martin
A1  - Föhlisch, Alexander
T1  - A soft X-ray approach to electron-phonon interactions beyond the Born-Oppenheimer approximation
JF  - Journal of electron spectroscopy and related phenomena : the international journal on theoretical and experimental aspects of electron spectroscopy
N2  - With modern soft X-ray methods, the whole field of electron-phonon interactions becomes accessible directly in the ultrafast time domain with ultrashort pulsed X-ray sources, as well as in the energy domain through modern highly resolving spectrometers. The well-known core-hole clock approach plays an intermediate role, resolving energetic and temporal features at the same time. In this perspective paper, we review several experiments to illustrate the modern advances in the selective study of electron-phonon interactions as fundamentally determining ingredients for materials properties. We present the different complementary approaches that can be taken with soft X-ray methods to conquer this field beyond the Born-Oppenheimer approximation.
KW  - Electron-phonon coupling
KW  - Resonant inelastic X-ray scattering
KW  - X-ray emission spectroscopy
KW  - Near edge X-ray absorption fine structure
Y1  - 2011
U6  - https://doi.org/10.1016/j.elspec.2010.12.032
SN  - 0368-2048
VL  - 184
IS  - 3-6
SP  - 313
EP  - 317
PB  - Elsevier
CY  - Amsterdam
ER  - 
TY  - JOUR
A1  - Beta, Carsten
A1  - Bodenschatz, Eberhard
T1  - Microfluidic tools for quantitative studies of eukaryotic chemotaxis
JF  - European journal of cell biology
N2  - Over the past decade, microfluidic techniques have been established as a versatile platform to perform live cell experiments under well-controlled conditions. To investigate the directional responses of cells, stable concentration profiles of chemotactic factors can be generated in microfluidic gradient mixers that provide a high degree of spatial control. However, the times for built-up and switching of gradient profiles are in general too slow to resolve the intracellular protein translocation events of directional sensing of eukaryotes. Here, we review an example of a conventional microfluidic gradient mixer as well as the novel flow photolysis technique that achieves an increased temporal resolution by combining the photo-activation of caged compounds with the advantages of microfluidic chambers.
KW  - Eukaryotic chemotaxis
KW  - Dictyostelium discoideum
KW  - Microfluidics
KW  - Caged compounds
KW  - Numerical simulations
Y1  - 2011
U6  - https://doi.org/10.1016/j.ejcb.2011.05.006
SN  - 0171-9335
VL  - 90
IS  - 10
SP  - 811
EP  - 816
PB  - Elsevier
CY  - Jena
ER  - 
TY  - THES
A1  - Bergner, André
T1  - Synchronization in complex systems with multiple time scales
T1  - Synchronisation in komplexen Systemen mit mehreren Zeitskalen
N2  - In the present work synchronization phenomena in complex dynamical systems exhibiting multiple time scales have been analyzed. Multiple time scales can be active in different manners. Three different systems have been analyzed with different methods from data analysis. The first system studied is a large heterogenous network of bursting neurons, that is a system with two predominant time scales, the fast firing of action potentials (spikes) and the burst of repetitive spikes followed by a quiescent phase. This system has been integrated numerically and analyzed with methods based on recurrence in phase space. An interesting result are the different transitions to synchrony found in the two distinct time scales. Moreover, an anomalous synchronization effect can be observed in the fast time scale, i.e. there is range of the coupling strength where desynchronization occurs. The second system analyzed, numerically as well as experimentally, is a pair of coupled CO₂ lasers in a chaotic bursting regime. This system is interesting due to its similarity with epidemic models. We explain the bursts by different time scales generated from unstable periodic orbits embedded in the chaotic attractor and perform a synchronization analysis of these different orbits utilizing the continuous wavelet transform. We find a diverse route to synchrony of these different observed time scales. The last system studied is a small network motif of limit cycle oscillators. Precisely, we have studied a hub motif, which serves as elementary building block for scale-free networks, a type of network found in many real world applications. These hubs are of special importance for communication and information transfer in complex networks. Here, a detailed study on the mechanism of synchronization in oscillatory networks with a broad frequency distribution has been carried out. In particular, we find a remote synchronization of nodes in the network which are not directly coupled. We also explain the responsible mechanism and its limitations and constraints. Further we derive an analytic expression for it and show that information transmission in pure phase oscillators, such as the Kuramoto type, is limited. In addition to the numerical and analytic analysis an experiment consisting of electrical circuits has been designed. The obtained results confirm the former findings.
N2  - In der vorliegenden Arbeit wurden Synchronisationsphänomene in komplexen Systemen mit mehreren Zeitskalen untersucht. Es gibt mehrere Möglichkeiten wie diese verschiedenen Zeitskalen vorkommen können. Drei verschiedene Systeme, jedes mit einer anderen Art von zeitlicher Multiskalität, wurden mit unterschiedlichen Methoden der Datenanalyse untersucht. Das erste untersuchte System ist ein ausgedehntes heterogenes Netzwerk von Neuronen mit zwei dominanten Zeitskalen, zum einen die schnelle Folge von Aktionspotenzialen und zum anderen einer abwechselnden Folge von einer Phase von Aktionspotenzialen und einer Ruhephase. Dieses System wurde numerisch integriert und mit Methoden der Phasenraumrekurrenz untersucht. Ein interessantes Ergebnis ist der unterschiedliche Übergang zur Synchronisation der Neuronen auf den beiden verschiedenen Zeitskalen. Des weiteren kann auf der schnellen Zeitskala eine anomale Synchronisation beobachtet werden, d.h. es gibt einen Bereich der Kopplungsstärke in dem es zu einer Desynchronisation kommt. Als zweites wurde, sowohl numerisch als auch experimentell, ein System von gekoppelten CO₂ Lasern untersucht, welche in einem chaotischen bursting Modus arbeiten. Dieses System ist auch durch seine Äquivalenz zu Epidemiemodellen interessant. Wir erklären die Bursts durch unterschiedliche Zeitskalen, welche durch in den chaotischen Attraktor eingebettete instabile periodische Orbits generiert werden. Wir führen eine Synchronisationsanalyse mit Hilfe der kontinuierlichen Wavelettransformation durch und finden einen unterschiedlichen Übergang zur Synchronisation auf den unterschiedlichen Zeitskalen. Das dritte analysierte System ist ein Netzwerkmotiv von Grenzzyklusoszillatoren. Genauer handelt es sich um ein Nabenmotiv, welches einen elementaren Grundbaustein von skalenfreien Netzwerken darstellt, das sind Netzwerke die eine bedeutende Rolle in vielen realen Anwendungen spielen. Diese Naben sind von besonderer Bedeutung für die Kommunikation und den Informationstransport in komplexen Netzwerken. Hierbei wurde eine detaillierte Untersuchung des Synchronisationsmechanismus in oszillatorischen Netzwerken mit einer breiten Frequenzverteilung durchgeführt. Insbesondere beobachten wir eine Fernsynchronisation von Netzwerkknoten, die nur indirekt über andere Oszillatoren miteinander gekoppelt sind. Wir erklären den zu Grunde liegenden Mechanismus und zeigen dessen Grenzen und Bedingungen auf. Des weiteren leiten wir einen analytischen Ausdruck für den Mechanismus her und zeigen, dass eine Informationsübertragung in reinen Phasenoszillatoren, wie beispielsweise vom Kuramototyp, eingeschränkt ist. Diese Ergebnisse konnten wir durch Experimente mit elektrischen Schaltkreisen bestätigen.
KW  - Komplexe Systeme
KW  - Synchronisation
KW  - Nichtlineare Dynamik
KW  - Datenanalyse
KW  - complex systems
KW  - synchronization
KW  - nonlinear dynamics
KW  - data analysis
Y1  - 2011
U6  - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus-53407
ER  - 
TY  - JOUR
A1  - Berenstein, Igal
A1  - Beta, Carsten
T1  - Flow-induced control of chemical turbulence
JF  - The journal of chemical physics : bridges a gap between journals of physics and journals of chemistr
N2  - We report spatiotemporal chaos in the Oregonator model of the Belousov-Zhabotinsky reaction. Spatiotemporal chaos spontaneously develops in a regime, where the underlying local dynamics show stable limit cycle oscillations (diffusion-induced turbulence). We show that spatiotemporal chaos can be suppressed by a unidirectional flow in the system. With increasing flow velocity, we observe a transition scenario from spatiotemporal chaos via a regime of travelling waves to a stationary steady state. At large flow velocities, we recover the known regime of flow distributed oscillations.
KW  - chaos
KW  - chemical equilibrium
KW  - chemically reactive flow
KW  - reaction kinetics theory
KW  - spatiotemporal phenomena
KW  - turbulence
Y1  - 2011
U6  - https://doi.org/10.1063/1.3656248
SN  - 0021-9606
VL  - 135
IS  - 16
PB  - American Institute of Physics
CY  - Melville
ER  - 
TY  - JOUR
A1  - Belova, Valentina
A1  - Shchukin, Dmitry G.
A1  - Gorin, Dmitry A.
A1  - Kopyshev, Alexey
A1  - Moehwald, Helmuth
T1  - A new approach to nucleation of cavitation bubbles at chemically modified surfaces
JF  - Physical chemistry, chemical physics : a journal of European Chemical Societies
N2  - Cavitation at the solid surface normally begins with nucleation, in which defects or assembled molecules located at a liquid-solid interface act as nucleation centers and are actively involved in the evolution of cavitation bubbles. Here, we propose a simple approach to evaluate the behavior of cavitation bubbles formed under high intensity ultrasound (20 kHz, 51.3 W cm (2)) at solid surfaces, based on sonication of patterned substrates with a small roughness (less than 3 nm) and controllable surface energy. A mixture of octadecylphosphonic acid (ODTA) and octadecanethiol (ODT) was stamped on the Si wafer coated with different thicknesses of an aluminium layer (20-500 nm). We investigated the growth mechanism of cavitation bubble nuclei and the evolution of individual pits (defects) formed under sonication on the modified surface. A new activation behavior as a function of Al thickness, sonication time, ultrasonic power and temperature is reported. In this process cooperativity is introduced, as initially formed pits further reduce the energy to form bubbles. Furthermore, cavitation on the patterns is a controllable process, where up to 40-50 min of sonication time only the hydrophobic areas are active nucleation sites. This study provides a convincing proof of our theoretical approach on nucleation.
Y1  - 2011
U6  - https://doi.org/10.1039/c1cp20218a
SN  - 1463-9076
VL  - 13
IS  - 17
SP  - 8015
EP  - 8023
PB  - Royal Society of Chemistry
CY  - Cambridge
ER  - 
TY  - JOUR
A1  - Baushev, Anton N.
T1  - Principal properties of the velocity distribution of dark matter particles on the outskirts of the Solar system
JF  - Monthly notices of the Royal Astronomical Society
N2  - The velocity distribution of the dark matter particles on the outskirts of the Solar system remains unclear. We suggest to determine it using experimentally found properties of the oldest halo objects. Indeed, the oldest halo stars and globular clusters form a collisionless system, as well as dark matter particles do, and they evolved in the same gravitational field. If we accept this analogy, we can show that the velocity distribution of the dark matter particles should be highly anisotropic and have a sharp maximum near upsilon similar to 500 km s(-1). The distribution is totally different from the Maxwell one.
 We analyse the influence of the distribution function on the results of dark matter detection experiments. It is found that the direct detection signal should differ noticeably from the one calculated from the Maxwell distribution with <upsilon > similar or equal to 220 km s(-1), which is conventional for direct detection experiments (the ratio depends on the detector properties and typically falls within the range between 6 and 0.2). Moreover, the sharp distinction from the Maxwell distribution can be very essential to the observations of dark matter annihilation.
KW  - elementary particles
KW  - methods: analytical
KW  - dark matter
Y1  - 2011
U6  - https://doi.org/10.1111/j.1745-3933.2011.01125.x
SN  - 0035-8711
VL  - 417
IS  - 1
SP  - L83
EP  - L87
PB  - Wiley-Blackwell
CY  - Malden
ER  - 
TY  - JOUR
A1  - Baumgärtel, Hellmut
T1  - A Characteristic decay semigroup for the resonances of trace class perturbations with analyticity conditions of semibounded hamiltonians
JF  - International journal of theoretical physic
N2  - To asymptotic complete scattering systems {M(+) + V, M(+)} on H(+) := L(2)(R(+), K, d lambda), where M(+) is the multiplication operator on H(+) and V is a trace class operator with analyticity conditions, a decay semigroup is associated such that the spectrum of the generator of this semigroup coincides with the set of all resonances (poles of the analytic continuation of the scattering matrix into the lower half plane across the positive half line), i.e. the decay semigroup yields a "time-dependent" characterization of the resonances. As a counterpart a "spectral characterization" is mentioned which is due to the "eigenvalue-like" properties of resonances.
KW  - Resonances
KW  - Scattering theory
KW  - Lax-Phillips theory
KW  - Decay semigroups
Y1  - 2011
U6  - https://doi.org/10.1007/s10773-010-0533-9
SN  - 0020-7748
VL  - 50
IS  - 7
SP  - 2002
EP  - 2008
PB  - Springer
CY  - New York
ER  -