TY - JOUR A1 - Gebser, Martin A1 - Kaufmann, Benjamin A1 - Schaub, Torsten H. T1 - Multi-threaded ASP solving with clasp JF - Theory and practice of logic programming N2 - We present the new multi-threaded version of the state-of-the-art answer set solver clasp. We detail its component and communication architecture and illustrate how they support the principal functionalities of clasp. Also, we provide some insights into the data representation used for different constraint types handled by clasp. All this is accompanied by an extensive experimental analysis of the major features related to multi-threading in clasp. Y1 - 2012 U6 - https://doi.org/10.1017/S1471068412000166 SN - 1471-0684 VL - 12 IS - 8 SP - 525 EP - 545 PB - Cambridge Univ. Press CY - New York ER - TY - JOUR A1 - Mileo, Alessandra A1 - Schaub, Torsten H. A1 - Merico, Davide A1 - Bisiani, Roberto T1 - Knowledge-based multi-criteria optimization to support indoor positioning JF - Annals of mathematics and artificial intelligence N2 - Indoor position estimation constitutes a central task in home-based assisted living environments. Such environments often rely on a heterogeneous collection of low-cost sensors whose diversity and lack of precision has to be compensated by advanced techniques for localization and tracking. Although there are well established quantitative methods in robotics and neighboring fields for addressing these problems, they lack advanced knowledge representation and reasoning capacities. Such capabilities are not only useful in dealing with heterogeneous and incomplete information but moreover they allow for a better inclusion of semantic information and more general homecare and patient-related knowledge. We address this problem and investigate how state-of-the-art localization and tracking methods can be combined with Answer Set Programming, as a popular knowledge representation and reasoning formalism. We report upon a case-study and provide a first experimental evaluation of knowledge-based position estimation both in a simulated as well as in a real setting. KW - Knowledge representation KW - Answer Set Programming KW - Wireless Sensor Networks KW - Localization KW - Tracking Y1 - 2011 U6 - https://doi.org/10.1007/s10472-011-9241-2 SN - 1012-2443 SN - 1573-7470 VL - 62 IS - 3-4 SP - 345 EP - 370 PB - Springer CY - Dordrecht ER - TY - JOUR A1 - Durzinsky, Markus A1 - Marwan, Wolfgang A1 - Ostrowski, Max A1 - Schaub, Torsten H. A1 - Wagler, Annegret T1 - Automatic network reconstruction using ASP JF - Theory and practice of logic programming N2 - Building biological models by inferring functional dependencies from experimental data is an important issue in Molecular Biology. To relieve the biologist from this traditionally manual process, various approaches have been proposed to increase the degree of automation. However, available approaches often yield a single model only, rely on specific assumptions, and/or use dedicated, heuristic algorithms that are intolerant to changing circumstances or requirements in the view of the rapid progress made in Biotechnology. Our aim is to provide a declarative solution to the problem by appeal to Answer Set Programming (ASP) overcoming these difficulties. We build upon an existing approach to Automatic Network Reconstruction proposed by part of the authors. This approach has firm mathematical foundations and is well suited for ASP due to its combinatorial flavor providing a characterization of all models explaining a set of experiments. The usage of ASP has several benefits over the existing heuristic algorithms. First, it is declarative and thus transparent for biological experts. Second, it is elaboration tolerant and thus allows for an easy exploration and incorporation of biological constraints. Third, it allows for exploring the entire space of possible models. Finally, our approach offers an excellent performance, matching existing, special-purpose systems. Y1 - 2011 U6 - https://doi.org/10.1017/S1471068411000287 SN - 1471-0684 VL - 11 SP - 749 EP - 766 PB - Cambridge Univ. Press CY - New York ER - TY - JOUR A1 - Gebser, Martin A1 - Kaminski, Roland A1 - Schaub, Torsten H. T1 - Complex optimization in answer set programming JF - Theory and practice of logic programming N2 - Preference handling and optimization are indispensable means for addressing nontrivial applications in Answer Set Programming (ASP). However, their implementation becomes difficult whenever they bring about a significant increase in computational complexity. As a consequence, existing ASP systems do not offer complex optimization capacities, supporting, for instance, inclusion-based minimization or Pareto efficiency. Rather, such complex criteria are typically addressed by resorting to dedicated modeling techniques, like saturation. Unlike the ease of common ASP modeling, however, these techniques are rather involved and hardly usable by ASP laymen. We address this problem by developing a general implementation technique by means of meta-prpogramming, thus reusing existing ASP systems to capture various forms of qualitative preferences among answer sets. In this way, complex preferences and optimization capacities become readily available for ASP applications. KW - Answer Set Programming KW - Preference Handling KW - Complex optimization KW - Meta-Programming Y1 - 2011 U6 - https://doi.org/10.1017/S1471068411000329 SN - 1471-0684 VL - 11 IS - 3 SP - 821 EP - 839 PB - Cambridge Univ. Press CY - New York ER - TY - JOUR A1 - Gebser, Martin A1 - Schaub, Torsten H. A1 - Thiele, Sven A1 - Veber, Philippe T1 - Detecting inconsistencies in large biological networks with answer set programming JF - Theory and practice of logic programming N2 - We introduce an approach to detecting inconsistencies in large biological networks by using answer set programming. To this end, we build upon a recently proposed notion of consistency between biochemical/genetic reactions and high-throughput profiles of cell activity. We then present an approach based on answer set programming to check the consistency of large-scale data sets. Moreover, we extend this methodology to provide explanations for inconsistencies by determining minimal representations of conflicts. In practice, this can be used to identify unreliable data or to indicate missing reactions. KW - answer set programming KW - bioinformatics KW - consistency KW - diagnosis Y1 - 2011 U6 - https://doi.org/10.1017/S1471068410000554 SN - 1471-0684 VL - 11 IS - 5-6 SP - 323 EP - 360 PB - Cambridge Univ. Press CY - New York ER - TY - JOUR A1 - Gebser, Martin A1 - Kaufmann, Benjamin A1 - Kaminski, Roland A1 - Ostrowski, Max A1 - Schaub, Torsten H. A1 - Schneider, Marius T1 - Potassco the Potsdam answer set solving collection JF - AI communications : AICOM ; the European journal on artificial intelligence N2 - This paper gives an overview of the open source project Potassco, the Potsdam Answer Set Solving Collection, bundling tools for Answer Set Programming developed at the University of Potsdam. KW - Answer set programming KW - declarative problem solving Y1 - 2011 U6 - https://doi.org/10.3233/AIC-2011-0491 SN - 0921-7126 VL - 24 IS - 2 SP - 107 EP - 124 PB - IOS Press CY - Amsterdam ER - TY - JOUR A1 - Gebser, Martin A1 - Sabuncu, Orkunt A1 - Schaub, Torsten H. T1 - An incremental answer set programming based system for finite model computation JF - AI communications : AICOM ; the European journal on artificial intelligence N2 - We address the problem of Finite Model Computation (FMC) of first-order theories and show that FMC can efficiently and transparently be solved by taking advantage of a recent extension of Answer Set Programming (ASP), called incremental Answer Set Programming (iASP). The idea is to use the incremental parameter in iASP programs to account for the domain size of a model. The FMC problem is then successively addressed for increasing domain sizes until an answer set, representing a finite model of the original first-order theory, is found. We implemented a system based on the iASP solver iClingo and demonstrate its competitiveness by showing that it slightly outperforms the winner of the FNT division of CADE's 2009 Automated Theorem Proving (ATP) competition on the respective benchmark collection. KW - Incremental answer set programming KW - finite model computation Y1 - 2011 U6 - https://doi.org/10.3233/AIC-2011-0496 SN - 0921-7126 VL - 24 IS - 2 SP - 195 EP - 212 PB - IOS Press CY - Amsterdam ER - TY - CHAP A1 - Gebser, Martin A1 - Hinrichs, Henrik A1 - Schaub, Torsten H. A1 - Thiele, Sven T1 - xpanda: a (simple) preprocessor for adding multi-valued propositions to ASP N2 - We introduce a simple approach extending the input language of Answer Set Programming (ASP) systems by multi-valued propositions. Our approach is implemented as a (prototypical) preprocessor translating logic programs with multi-valued propositions into logic programs with Boolean propositions only. Our translation is modular and heavily benefits from the expressive input language of ASP. The resulting approach, along with its implementation, allows for solving interesting constraint satisfaction problems in ASP, showing a good performance. Y1 - 2010 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus-41466 ER - TY - JOUR A1 - Hermenegildo, Manuel A1 - Schaub, Torsten H. T1 - Introduction to the technical communications of the 26th International Conference on Logic Programming : special issue Y1 - 2010 UR - http://www.cs.kuleuven.ac.be/~dtai/projects/ALP//TPLP/ U6 - https://doi.org/10.1017/S1471068410000153 SN - 1471-0684 ER - TY - JOUR A1 - Gebser, Martin A1 - Gharib, Mona A1 - Mercer, Robert E. A1 - Schaub, Torsten H. T1 - Monotonic answer set programming N2 - Answer set programming (ASP) does not allow for incrementally constructing answer sets or locally validating constructions like proofs by only looking at a part of the given program. In this article, we elaborate upon an alternative approach to ASP that allows for incremental constructions. Our approach draws its basic intuitions from the area of default logics. We investigate the feasibility of the concept of semi-monotonicity known from default logics as a basis of incrementality. On the one hand, every logic program has at least one answer set in our alternative setting, which moreover can be constructed incrementally based on generating rules. On the other hand, the approach may produce answer sets lacking characteristic properties of standard answer sets, such as being a model of the given program. We show how integrity constraints can be used to re-establish such properties, even up to correspondence with standard answer sets. Furthermore, we develop an SLD-like proof procedure for our incremental approach to ASP, which allows for query-oriented computations. Also, we provide a characterization of our definition of answer sets via a modification of Clarks completion. Based on this notion of program completion, we present an algorithm for computing the answer sets of a logic program in our approach. Y1 - 2009 UR - http://logcom.oxfordjournals.org/ U6 - https://doi.org/10.1093/logcom/exn040 SN - 0955-792X ER - TY - JOUR A1 - Brain, Martin A1 - Gebser, Martin A1 - Pührer, Jörg A1 - Schaub, Torsten H. A1 - Tompits, Hans A1 - Woltran, Stefan T1 - "That is illogical, Captain!" : the debugging support tool spock for answer-set programs ; system description Y1 - 2007 ER - TY - JOUR A1 - Brain, Martin A1 - Gebser, Martin A1 - Pührer, Jörg A1 - Schaub, Torsten H. A1 - Tompits, Hans A1 - Woltran, Stefan T1 - Debugging ASP programs by means of ASP Y1 - 2007 SN - 978-3-540- 72199-4 ER - TY - JOUR A1 - Gebser, Martin A1 - Schaub, Torsten H. A1 - Tompits, Hans A1 - Woltran, Stefan T1 - Alternative characterizations for program equivalence under aswer-set semantics : a preliminary report Y1 - 2007 ER - TY - JOUR A1 - Delgrande, James Patrick A1 - Schaub, Torsten H. A1 - Tompits, Hans T1 - A preference-based framework for updating logic programs Y1 - 2007 SN - 978-3-540- 72199-4 ER - TY - JOUR A1 - Mileo, Alessandra A1 - Schaub, Torsten H. T1 - Qualitative constraint enforcement in advanced policy specification Y1 - 2007 ER - TY - JOUR A1 - Delgrande, James Patrick A1 - Lang, Jérôme A1 - Schaub, Torsten H. T1 - Belief change based on global minimisation Y1 - 2007 ER - TY - JOUR A1 - Gebser, Martin A1 - Schaub, Torsten H. A1 - Thiele, Sven T1 - GrinGo : a new grounder for answer set programming Y1 - 2007 SN - 978-3-540- 72199-4 ER - TY - JOUR A1 - Gebser, Martin A1 - Liu, Lengning A1 - Namasivayam, Gayathri A1 - Neumann, André A1 - Schaub, Torsten H. A1 - Truszczynski, Miroslaw T1 - The first answer set programming system competition Y1 - 2007 SN - 978-3-540- 72199-4 ER - TY - JOUR A1 - Brain, Martin A1 - Faber, Wolfgang A1 - Maratea, Marco A1 - Polleres, Axel A1 - Schaub, Torsten H. A1 - Schindlauer, Roman T1 - What should an ASP solver output? : a multiple position paper Y1 - 2007 ER - TY - JOUR A1 - Gebser, Martin A1 - Kaufmann, Benjamin A1 - Neumann, André A1 - Schaub, Torsten H. T1 - Conflict-driven answer set enumeration Y1 - 2007 SN - 978-3-540- 72199-4 ER -