TY - JOUR A1 - Hemme, Dorothea A1 - Veyel, Daniel A1 - Muehlhaus, Timo A1 - Sommer, Frederik A1 - Jueppner, Jessica A1 - Unger, Ann-Katrin A1 - Sandmann, Michael A1 - Fehrle, Ines A1 - Schoenfelder, Stephanie A1 - Steup, Martin A1 - Geimer, Stefan A1 - Kopka, Joachim A1 - Giavalisco, Patrick A1 - Schroda, Michael T1 - Systems-wide analysis of acclimation responses to long-term heat stress and recovery in the photosynthetic model organism Chlamydomonas reinhardtii JF - The plant cell N2 - We applied a top-down systems biology approach to understand how Chlamydomonas reinhardtii acclimates to long-term heat stress (HS) and recovers from it. For this, we shifted cells from 25 to 42 degrees C for 24 h and back to 25 degrees C for >= 8 h and monitored abundances of 1856 proteins/protein groups, 99 polar and 185 lipophilic metabolites, and cytological and photosynthesis parameters. Our data indicate that acclimation of Chlamydomonas to long-term HS consists of a temporally ordered, orchestrated implementation of response elements at various system levels. These comprise (1) cell cycle arrest; (2) catabolism of larger molecules to generate compounds with roles in stress protection; (3) accumulation of molecular chaperones to restore protein homeostasis together with compatible solutes; (4) redirection of photosynthetic energy and reducing power from the Calvin cycle to the de novo synthesis of saturated fatty acids to replace polyunsaturated ones in membrane lipids, which are deposited in lipid bodies; and (5) when sinks for photosynthetic energy and reducing power are depleted, resumption of Calvin cycle activity associated with increased photorespiration, accumulation of reactive oxygen species scavengers, and throttling of linear electron flow by antenna uncoupling. During recovery from HS, cells appear to focus on processes allowing rapid resumption of growth rather than restoring pre-HS conditions. Y1 - 2014 U6 - https://doi.org/10.1105/tpc.114.130997 SN - 1040-4651 SN - 1532-298X VL - 26 IS - 11 SP - 4270 EP - 4297 PB - American Society of Plant Physiologists CY - Rockville ER - TY - JOUR A1 - Garz, Andreas A1 - Sandmann, Michael A1 - Rading, Michael A1 - Ramm, Sascha A1 - Menzel, Ralf A1 - Steup, Martin T1 - Cell-to-cell diversity in a synchronized chlamydomonas culture as revealed by single-cell analyses JF - Biophysical journal N2 - In a synchronized photoautotrophic culture of Chlamydomonas reinhardtii, cell size, cell number, and the averaged starch content were determined throughout the light-dark cycle. For single-cell analyses, the relative cellular starch was quantified by measuring the second harmonic generation (SHG). In destained cells, amylopectin essentially represents the only biophotonic structure. As revealed by various validation procedures, SHG signal intensities are a reliable relative measure of the cellular starch content. During photosynthesis-driven starch biosynthesis, synchronized Chlamydomonas cells possess an unexpected cell-to-cell diversity both in size and starch content, but the starch-related heterogeneity largely exceeds that of size. The cellular volume, starch content, and amount of starch/cell volume obey lognormal distributions. Starch degradation was initiated by inhibiting the photosynthetic electron transport in illuminated cells or by darkening. Under both conditions, the averaged rate of starch degradation is almost constant, but it is higher in illuminated than in darkened cells. At the single-cell level, rates of starch degradation largely differ but are unrelated to the initial cellular starch content. A rate equation describing the cellular starch degradation Y1 - 2012 U6 - https://doi.org/10.1016/j.bpj.2012.07.026 SN - 0006-3495 VL - 103 IS - 5 SP - 1078 EP - 1086 PB - Cell Press CY - Cambridge ER - TY - JOUR A1 - Rading, M. Michael A1 - Sandmann, Michael A1 - Steup, Martin A1 - Chiarugi, Davide A1 - Valleriani, Angelo T1 - Weak correlation of starch and volume in synchronized photosynthetic cells JF - Physical review : E, Statistical, nonlinear and soft matter physics N2 - In cultures of unicellular algae, features of single cells, such as cellular volume and starch content, are thought to be the result of carefully balanced growth and division processes. Single-cell analyses of synchronized photoautotrophic cultures of the unicellular alga Chlamydomonas reinhardtii reveal, however, that the cellular volume and starch content are only weakly correlated. Likewise, other cell parameters, e.g., the chlorophyll content per cell, are only weakly correlated with cell size. We derive the cell size distributions at the beginning of each synchronization cycle considering growth, timing of cell division and daughter cell release, and the uneven division of cell volume. Furthermore, we investigate the link between cell volume growth and starch accumulation. This work presents evidence that, under the experimental conditions of light-dark synchronized cultures, the weak correlation between both cell features is a result of a cumulative process rather than due to asymmetric partition of biomolecules during cell division. This cumulative process necessarily limits cellular similarities within a synchronized cell population. Y1 - 2015 U6 - https://doi.org/10.1103/PhysRevE.91.012711 SN - 1539-3755 SN - 1550-2376 VL - 91 IS - 1 PB - American Physical Society CY - College Park ER - TY - GEN A1 - Hass, Roland A1 - Sandmann, Michael A1 - Reich, Oliver T1 - Photonic sensing in highly concentrated biotechnical processes by photon density wave spectroscopy T2 - Proceedings SPIE 10323, 25th International Conference on Optical Fiber Sensors N2 - Photon Density Wave (PDW) spectroscopy is introduced as a new approach for photonic sensing in highly concentrated biotechnical processes. It independently quantifies the absorption and reduced scattering coefficient calibration-free and as a function of time, thus describing the optical properties in the vis/NIR range of the biomaterial during their processing. As examples of industrial relevance, enzymatic milk coagulation, beer mashing, and algae cultivation in photo bioreactors are discussed. KW - Photon Density Wave Spectroscopy KW - multiple light scattering KW - fermentation KW - algae cultivation KW - process analytical technology KW - fiber spectroscopy Y1 - 2017 SN - 978-1-5090-4850-2 U6 - https://doi.org/10.1117/12.2263617 SN - 0277-786X SN - 1996-756X VL - 10323 PB - IEEE CY - New York ER - TY - THES A1 - Sandmann, Michael T1 - Biochemische und cytologische Marker der Zellentwicklung synchronisierter Stämme con Chlamydomonas reinhardtii Y1 - 2013 CY - Potsdam ER - TY - JOUR A1 - Gajdanowicz, Pawel A1 - Michard, Erwan A1 - Sandmann, Michael A1 - Rocha, Marcio A1 - Correa, Luiz Gustavo Guedes A1 - Ramirez-Aguilar, Santiago J. A1 - Gomez-Porras, Judith L. A1 - Gonzalez, Wendy A1 - Thibaud, Jean-Baptiste A1 - van Dongen, Joost T. A1 - Dreyer, Ingo T1 - Potassium (K plus ) gradients serve as a mobile energy source in plant vascular tissues JF - Proceedings of the National Academy of Sciences of the United States of America N2 - The essential mineral nutrient potassium (K(+)) is the most important inorganic cation for plants and is recognized as a limiting factor for crop yield and quality. Nonetheless, it is only partially understood how K(+) contributes to plant productivity. K(+) is used as a major active solute to maintain turgor and to drive irreversible and reversible changes in cell volume. K(+) also plays an important role in numerous metabolic processes, for example, by serving as an essential cofactor of enzymes. Here, we provide evidence for an additional, previously unrecognized role of K(+) in plant growth. By combining diverse experimental approaches with computational cell simulation, we show that K(+) circulating in the phloem serves as a decentralized energy storage that can be used to overcome local energy limitations. Posttranslational modification of the phloem-expressed Arabidopsis K(+) channel AKT2 taps this "potassium battery," which then efficiently assists the plasma membrane H(+)-ATPase in energizing the transmembrane phloem (re) loading processes. KW - channel gating KW - energy limiting condition KW - phloem reloading KW - posttranslational regulation KW - potassium channel Y1 - 2011 U6 - https://doi.org/10.1073/pnas.1009777108 SN - 0027-8424 VL - 108 IS - 2 SP - 864 EP - 869 PB - National Acad. of Sciences CY - Washington ER - TY - JOUR A1 - Sandmann, Michael A1 - Garz, Andreas A1 - Menzel, Ralf T1 - Physiological response of two different Chlamydomonas reinhardtii strains to light-dark rhythms JF - Botany N2 - Cells of a cell-wall deficient line (cw15-type) of Chlamydomonas reinhardtii and of the corresponding wild type were grown during repetitive light-dark cycles. In a direct comparison, both lines showed approximately the same relative biomass increase during light phase but the cw-line produced significantly more, and smaller, daughter cells. Throughout the light period the average cellular starch content, the cellular chlorophyll content, the cellular rate of dark respiration, and the cellular rate of photosynthesis of the cw-line was lower. Despite this, several non-cell volume related parameters like the development of starch content per cell volume were clearly different over time between the strains. Additionally, the chlorophyll-based photosynthesis rates were 2-fold higher in the mutant than in the wild-type cells, and the ratio of chlorophyll a to chlorophyll b as well as the light-saturation index were also consistently higher in the mutant cells. Differences in the starch content were also confirmed by single cell analyses using a sensitive SHG-based microscopy approach. In summary, the cw15-type mutant deviates from its genetic background in the entire cell physiology. Both lines should be used in further studies in comparative systems biology with focus on the detailed relation between cell volume increase, photosynthesis, starch metabolism, and daughter cell productivity. KW - cell wall deficient mutant KW - diurnal rhythm KW - nonlinear microscopy KW - photosynthesis KW - single-cell analysis Y1 - 2016 U6 - https://doi.org/10.1139/cjb-2015-0144 SN - 1916-2790 SN - 1916-2804 VL - 94 SP - 53 EP - 64 PB - NRC Research Press CY - Ottawa ER - TY - JOUR A1 - Sandmann, Michael A1 - Münzberg, Marvin A1 - Bressel, Lena A1 - Reich, Oliver A1 - Hass, Roland T1 - Inline monitoring of high cell density cultivation of Scenedesmus rubescens in a mesh ultra-thin layer photobioreactor by photon density wave spectroscopy JF - BMC Research Notes / Biomed Central N2 - Objective Due to multiple light scattering that occurs inside and between cells, quantitative optical spectroscopy in turbid biological suspensions is still a major challenge. This includes also optical inline determination of biomass in bioprocessing. Photon Density Wave (PDW) spectroscopy, a technique based on multiple light scattering, enables the independent and absolute determination of optical key parameters of concentrated cell suspensions, which allow to determine biomass during cultivation. Results A unique reactor type, called "mesh ultra-thin layer photobioreactor" was used to create a highly concentrated algal suspension. PDW spectroscopy measurements were carried out continuously in the reactor without any need of sampling or sample preparation, over 3 weeks, and with 10-min time resolution. Conventional dry matter content and coulter counter measurements have been employed as established offline reference analysis. The PBR allowed peak cell dry weight (CDW) of 33.4 g L-1. It is shown that the reduced scattering coefficient determined by PDW spectroscopy is strongly correlated with the biomass concentration in suspension and is thus suitable for process understanding. The reactor in combination with the fiber-optical measurement approach will lead to a better process management. KW - Photon density wave spectroscopy KW - Multiple light scattering KW - Process KW - analytical technology KW - Fiber-optical spectroscopy KW - Mesh ultra-thin layer KW - photobioreactor Y1 - 2022 U6 - https://doi.org/10.1186/s13104-022-05943-2 SN - 1756-0500 VL - 15 IS - 1 PB - Biomed Central (London) CY - London ER -