TY  - JOUR
A1  - Cook, Katherine V.
A1  - Li, Chuang
A1  - Cai, Haiyuan
A1  - Krumholz, Lee R.
A1  - Hambright, K. David
A1  - Paerl, Hans W.
A1  - Steffen, Morgan M.
A1  - Wilson, Alan E.
A1  - Burford, Michele A.
A1  - Grossart, Hans-Peter
A1  - Hamilton, David P.
A1  - Jiang, Helong
A1  - Sukenik, Assaf
A1  - Latour, Delphine
A1  - Meyer, Elisabeth I.
A1  - Padisak, Judit
A1  - Qin, Boqiang
A1  - Zamor, Richard M.
A1  - Zhu, Guangwei
T1  - The global Microcystis interactome
JF  - Limnology and oceanography
N2  - Bacteria play key roles in the function and diversity of aquatic systems, but aside from study of specific bloom systems, little is known about the diversity or biogeography of bacteria associated with harmful cyanobacterial blooms (cyanoHABs). CyanoHAB species are known to shape bacterial community composition and to rely on functions provided by the associated bacteria, leading to the hypothesized cyanoHAB interactome, a coevolved community of synergistic and interacting bacteria species, each necessary for the success of the others. Here, we surveyed the microbiome associated with Microcystis aeruginosa during blooms in 12 lakes spanning four continents as an initial test of the hypothesized Microcystis interactome. We predicted that microbiome composition and functional potential would be similar across blooms globally. Our results, as revealed by 16S rRNA sequence similarity, indicate that M. aeruginosa is cosmopolitan in lakes across a 280 degrees longitudinal and 90 degrees latitudinal gradient. The microbiome communities were represented by a wide range of operational taxonomic units and relative abundances. Highly abundant taxa were more related and shared across most sites and did not vary with geographic distance, thus, like Microcystis, revealing no evidence for dispersal limitation. High phylogenetic relatedness, both within and across lakes, indicates that microbiome bacteria with similar functional potential were associated with all blooms. While Microcystis and the microbiome bacteria shared many genes, whole-community metagenomic analysis revealed a suite of biochemical pathways that could be considered complementary. Our results demonstrate a high degree of similarity across global Microcystis blooms, thereby providing initial support for the hypothesized Microcystis interactome.
Y1  - 2019
U6  - https://doi.org/10.1002/lno.11361
SN  - 0024-3590
SN  - 1939-5590
VL  - 65
SP  - S194
EP  - S207
PB  - Wiley
CY  - Hoboken
ER  - 
TY  - JOUR
A1  - Van den Wyngaert, Silke
A1  - Ganzert, Lars
A1  - Seto, Kensuke
A1  - Rojas-Jimenez, Keilor
A1  - Agha, Ramsy
A1  - Berger, Stella A.
A1  - Woodhouse, Jason
A1  - Padisak, Judit
A1  - Wurzbacher, Christian
A1  - Kagami, Maiko
A1  - Grossart, Hans-Peter
T1  - Seasonality of parasitic and saprotrophic zoosporic fungi: linking sequence data to ecological traits
JF  - ISME journal
N2  - Zoosporic fungi of the phylum Chytridiomycota (chytrids) regularly dominate pelagic fungal communities in freshwater and marine environments. Their lifestyles range from obligate parasites to saprophytes. Yet, linking the scarce available sequence data to specific ecological traits or their host ranges constitutes currently a major challenge. We combined 28 S rRNA gene amplicon sequencing with targeted isolation and sequencing approaches, along with cross-infection assays and analysis of chytrid infection prevalence to obtain new insights into chytrid diversity, ecology, and seasonal dynamics in a temperate lake. Parasitic phytoplankton-chytrid and saprotrophic pollen-chytrid interactions made up the majority of zoosporic fungal reads. We explicitly demonstrate the recurrent dominance of parasitic chytrids during frequent diatom blooms and saprotrophic chytrids during pollen rains. Distinct temporal dynamics of diatom-specific parasitic clades suggest mechanisms of coexistence based on niche differentiation and competitive strategies. The molecular and ecological information on chytrids generated in this study will aid further exploration of their spatial and temporal distribution patterns worldwide. To fully exploit the power of environmental sequencing for studies on chytrid ecology and evolution, we emphasize the need to intensify current isolation efforts of chytrids and integrate taxonomic and autecological data into long-term studies and experiments.
Y1  - 2022
U6  - https://doi.org/10.1038/s41396-022-01267-y
SN  - 1751-7362
SN  - 1751-7370
VL  - 16
IS  - 9
SP  - 2242
EP  - 2254
PB  - Springer Nature
CY  - London
ER  -