TY - JOUR A1 - De Frenne, P. A1 - Kolb, Annette A1 - Graae, Benete Jessen A1 - Decocq, Guillaume A1 - Baltora, S. A1 - De Schrijver, A. A1 - Brunet, J. A1 - Chabrerie, Olivier A1 - Cousins, Sara A. O. A1 - Dhondt, Rob A1 - Diekmann, Martin A1 - Gruwez, R. A1 - Heinken, Thilo A1 - Hermy, Martin A1 - Liira, J. A1 - Saguez, R. A1 - Shevtsova, Anna A1 - Baskin, Carol C. A1 - Verheyen, Kris T1 - A latitudinal gradient in seed nutrients of the forest herb Anemone nemorosa JF - Plant biology N2 - The nutrient concentration in seeds determines many aspects of potential success of the sexual reproductive phase of plants, including the seed predation probability, efficiency of seed dispersal and seedling performance. Despite considerable research interest in latitudinal gradients of foliar nutrients, a similar gradient for seeds remains unexplored. We investigated a potential latitudinal gradient in seed nutrient concentrations within the widespread European understorey forest herb Anemone nemorosa L. We sampled seeds of A. nemorosa in 15 populations along a 1900-km long latitudinal gradient at three to seven seed collection dates post-anthesis and investigated the relative effects of growing degree-hours > 5 degrees C, soil characteristics and latitude on seed nutrient concentrations. Seed nitrogen, nitrogen:phosphorus ratio and calcium concentration decreased towards northern latitudes, while carbon:nitrogen ratios increased. When taking differences in growing degree-hours and measured soil characteristics into account and only considering the most mature seeds, the latitudinal decline remained particularly significant for seed nitrogen concentration. We argue that the decline in seed nitrogen concentration can be attributed to northward decreasing seed provisioning due to lower soil nitrogen availability or greater investment in clonal reproduction. This pattern may have large implications for the reproductive performance of this forest herb as the degree of seed provisioning ultimately co-determines seedling survival and reproductive success. KW - Collection date KW - latitude KW - nutrient stoichiometry KW - seed nitrogen KW - seed predation KW - seed provisioning KW - sexual reproduction KW - wood anemone Y1 - 2011 U6 - https://doi.org/10.1111/j.1438-8677.2010.00404.x SN - 1435-8603 VL - 13 IS - 3 SP - 493 EP - 501 PB - Wiley-Blackwell CY - Malden ER - TY - JOUR A1 - Ebenhoeh, Oliver A1 - Houwaart, Torsten A1 - Lokstein, Heiko A1 - Schlede, Stephanie A1 - Tirok, Katrin T1 - A minimal mathematical model of nonphotochemical quenching of chlorophyll fluorescence JF - Biosystems : journal of biological and information processing sciences N2 - Under natural conditions, plants are exposed to rapidly changing light intensities. To acclimate to such fluctuations, plants have evolved adaptive mechanisms that optimally exploit available light energy and simultaneously minimise damage of the photosynthetic apparatus through excess light. An important mechanism is the dissipation of excess excitation energy as heat which can be measured as nonphotochemical quenching of chlorophyll fluorescence (NPQ). In this paper, we present a highly simplified mathematical model that captures essential experimentally observed features of the short term adaptive quenching dynamics. We investigate the stationary and dynamic behaviour of the model and systematically analyse the dependence of characteristic system properties on key parameters such as rate constants and pool sizes. Comparing simulations with experimental data allows to derive conclusions about the validity of the simplifying assumptions and we further propose hypotheses regarding the role of the xanthophyll cycle in NPQ. We envisage that the presented theoretical description of the light reactions in conjunction with short term adaptive processes serves as a basis for the development of more detailed mechanistic models by which the molecular mechanisms of NPQ can be theoretically studied. KW - Photosynthesis KW - Light reactions KW - Nonphotochemical quenching of chlorophyll fluorescence KW - Chlorophyll fluorescence KW - Mathematical model Y1 - 2011 U6 - https://doi.org/10.1016/j.biosystems.2010.10.011 SN - 0303-2647 VL - 103 IS - 2 SP - 196 EP - 204 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Bog, Anja A1 - Plattner, Hasso A1 - Zeier, Alexander T1 - A mixed transaction processing and operational reporting benchmark JF - Information systems frontiers N2 - The importance of reporting is ever increasing in today's fast-paced market environments and the availability of up-to-date information for reporting has become indispensable. Current reporting systems are separated from the online transaction processing systems (OLTP) with periodic updates pushed in. A pre-defined and aggregated subset of the OLTP data, however, does not provide the flexibility, detail, and timeliness needed for today's operational reporting. As technology advances, this separation has to be re-evaluated and means to study and evaluate new trends in data storage management have to be provided. This article proposes a benchmark for combined OLTP and operational reporting, providing means to evaluate the performance of enterprise data management systems for mixed workloads of OLTP and operational reporting queries. Such systems offer up-to-date information and the flexibility of the entire data set for reporting. We describe how the benchmark provokes the conflicts that are the reason for separating the two workloads on different systems. In this article, we introduce the concepts, logical data schema, transactions and queries of the benchmark, which are entirely based on the original data sets and real workloads of existing, globally operating enterprises. KW - Benchmarking KW - Mixed workload KW - OLTP KW - Operational reporting Y1 - 2011 U6 - https://doi.org/10.1007/s10796-010-9283-8 SN - 1387-3326 VL - 13 IS - 3 SP - 321 EP - 335 PB - Springer CY - Dordrecht ER - TY - JOUR A1 - Zaupa, Alessandro A1 - Neffe, Axel T. A1 - Pierce, Benjamin F. A1 - Lendlein, Andreas A1 - Hofmann, Dieter T1 - A molecular dynamic analysis of gelatin as an amorphous material Prediction of mechanical properties of gelatin systems JF - The international journal of artificial organs N2 - Biomaterials are used in regenerative medicine for induced autoregeneration and tissue engineering. This is often challenging, however, due to difficulties in tailoring and controlling the respective material properties. Since functionalization is expected to offer better control, in this study gelatin chains were modified with physically interacting groups based on tyrosine with the aim of causing the formation of physical crosslinks. This method permits application-specific properties like swelling and better tailoring of mechanical properties. The design of the crosslink strategy was supported by molecular dynamic (MD) simulations of amorphous bulk models for gelatin and functionalized gelatins at different water contents (0.8 and 25 wt.-%). The results permitted predictions to be formulated about the expected crosslink density and its influence on equilibrium swelling behavior and on elastic material properties. The models of pure gelatin were used to validate the strategy by comparison between simulated and experimental data such as density, backbone conformation angle distribution, and X-ray scattering spectra. A key result of the simulations was the prediction that increasing the number of aromatic functions attached to the gelatin chain leads to an increase in the number of physical netpoints observed in the simulated bulk packing models. By comparison with the Flory-Rehner model, this suggested reduced equilibrium swelling of the functionalized materials in water, a prediction that was subsequently confirmed by our experimental work. The reduction and control of the equilibrium degree of swelling in water is a key criterion for the applicability of functionalized gelatins when used, for example, as matrices for induced autoregeneration of tissues. KW - Physical Network KW - Biopolymer material KW - Molecular modeling KW - Gelatin Y1 - 2011 U6 - https://doi.org/10.5301/IJAO.2010.6083 SN - 0391-3988 VL - 34 IS - 2 SP - 139 EP - 151 PB - Wichtig CY - Milano ER - TY - JOUR A1 - Aksu, Yilmaz A1 - Frasca, Stefano A1 - Wollenberger, Ursula A1 - Driess, Matthias A1 - Thomas, Arne T1 - A molecular precursor approach to tunable porous tin-rich indium tin oxide with durable high electrical conductivity for bioelectronic devices JF - Chemistry of materials : a publication of the American Chemical Society N2 - The preparation of porous, i.e., high surface area electrodes from transparent conducting oxides, is a valuable goal in materials chemistry as such electrodes can enable further development of optoelectronic, electrocatalytic, or bioelectronic devices. In this work the first tin-rich mesoporous indium tin oxide is prepared using the molecular heterobimetallic single-source precursor, indium tin tris-tert-butoxide, together with an appropriate structure-directing template, yielding materials with high surface areas and tailorable pore size. The resulting mesoporous tin-rich ITO films show a high and durable electrical conductivity and transparency, making them interesting materials for hosting electroactive biomolecules such as proteins. In fact, its unique performance in bioelectronic applications has been demonstrated by immobilization of high amounts of cytochrome c into the mesoporous film which undergo redox processes directly with the conductive electrode material. KW - indium tin oxide ITO KW - electrode KW - bioelectrochemistry KW - device KW - cytochrome c Y1 - 2011 U6 - https://doi.org/10.1021/cm103087p SN - 0897-4756 VL - 23 IS - 7 SP - 1798 EP - 1804 PB - American Chemical Society CY - Washington ER - TY - JOUR A1 - Giese, Holger A1 - Henkler, Stefan A1 - Hirsch, Martin T1 - A multi-paradigm approach supporting the modular execution of reconfigurable hybrid systems JF - Simulation : transactions of the Society for Modeling and Simulation International N2 - Advanced mechatronic systems have to integrate existing technologies from mechanical, electrical and software engineering. They must be able to adapt their structure and behavior at runtime by reconfiguration to react flexibly to changes in the environment. Therefore, a tight integration of structural and behavioral models of the different domains is required. This integration results in complex reconfigurable hybrid systems, the execution logic of which cannot be addressed directly with existing standard modeling, simulation, and code-generation techniques. We present in this paper how our component-based approach for reconfigurable mechatronic systems, MECHATRONIC UML, efficiently handles the complex interplay of discrete behavior and continuous behavior in a modular manner. In addition, its extension to even more flexible reconfiguration cases is presented. KW - code generation KW - hybrid systems KW - reconfigurable systems KW - simulation Y1 - 2011 U6 - https://doi.org/10.1177/0037549710366824 SN - 0037-5497 VL - 87 IS - 9 SP - 775 EP - 808 PB - Sage Publ. CY - London ER - TY - JOUR A1 - Shin, Seoleun A1 - Zöller, Gert A1 - Holschneider, Matthias A1 - Reich, Sebastian T1 - A multigrid solver for modeling complex interseismic stress fields JF - Computers & geosciences : an international journal devoted to the publication of papers on all aspects of geocomputation and to the distribution of computer programs and test data sets ; an official journal of the International Association for Mathematical Geology N2 - We develop a multigrid, multiple time stepping scheme to reduce computational efforts for calculating complex stress interactions in a strike-slip 2D planar fault for the simulation of seismicity. The key elements of the multilevel solver are separation of length scale, grid-coarsening, and hierarchy. In this study the complex stress interactions are split into two parts: the first with a small contribution is computed on a coarse level, and the rest for strong interactions is on a fine level. This partition leads to a significant reduction of the number of computations. The reduction of complexity is even enhanced by combining the multigrid with multiple time stepping. Computational efficiency is enhanced by a factor of 10 while retaining a reasonable accuracy, compared to the original full matrix-vortex multiplication. The accuracy of solution and computational efficiency depend on a given cut-off radius that splits multiplications into the two parts. The multigrid scheme is constructed in such a way that it conserves stress in the entire half-space. KW - Multigrid KW - Multiple time stepping KW - Strike-slip fault model Y1 - 2011 U6 - https://doi.org/10.1016/j.cageo.2010.11.011 SN - 0098-3004 VL - 37 IS - 8 SP - 1075 EP - 1082 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Belova, Valentina A1 - Shchukin, Dmitry G. A1 - Gorin, Dmitry A. A1 - Kopyshev, Alexey A1 - Moehwald, Helmuth T1 - A new approach to nucleation of cavitation bubbles at chemically modified surfaces JF - Physical chemistry, chemical physics : a journal of European Chemical Societies N2 - Cavitation at the solid surface normally begins with nucleation, in which defects or assembled molecules located at a liquid-solid interface act as nucleation centers and are actively involved in the evolution of cavitation bubbles. Here, we propose a simple approach to evaluate the behavior of cavitation bubbles formed under high intensity ultrasound (20 kHz, 51.3 W cm (2)) at solid surfaces, based on sonication of patterned substrates with a small roughness (less than 3 nm) and controllable surface energy. A mixture of octadecylphosphonic acid (ODTA) and octadecanethiol (ODT) was stamped on the Si wafer coated with different thicknesses of an aluminium layer (20-500 nm). We investigated the growth mechanism of cavitation bubble nuclei and the evolution of individual pits (defects) formed under sonication on the modified surface. A new activation behavior as a function of Al thickness, sonication time, ultrasonic power and temperature is reported. In this process cooperativity is introduced, as initially formed pits further reduce the energy to form bubbles. Furthermore, cavitation on the patterns is a controllable process, where up to 40-50 min of sonication time only the hydrophobic areas are active nucleation sites. This study provides a convincing proof of our theoretical approach on nucleation. Y1 - 2011 U6 - https://doi.org/10.1039/c1cp20218a SN - 1463-9076 VL - 13 IS - 17 SP - 8015 EP - 8023 PB - Royal Society of Chemistry CY - Cambridge ER - TY - JOUR A1 - Wessig, Pablo A1 - Wawrzinek, Robert A1 - Moellnitz, Kristian A1 - Feldbusch, Elvira A1 - Schilde, Uwe T1 - A new class of fluorescent dyes based on 1,3-benzodioxole and [1,3]-dioxolo[4.5-f]benzodioxole JF - Tetrahedron letters N2 - We report on synthesis and photophysical properties of a new class of fluorescent dyes. They are characterized by large Stokes-shifts, long fluorescence lifetimes in organic solvents and a pronounced dependency of the fluorescence lifetime on the solvent polarity. Also worthy of note is the high bleaching stability. To provide access to biochemical and medical applications a series of derivatives were prepared, which exhibit specific reactivity towards different biologically relevant functional groups (carboxylic acids, amines, maleimides, N-hydroxysuccinimide esters). Furthermore, two alkynes were prepared, which could be used in 'Click' chemistry. KW - Fluorescent dyes KW - Fluorescence lifetime KW - Large Stokes-shifts KW - Heterocycles Y1 - 2011 U6 - https://doi.org/10.1016/j.tetlet.2011.09.058 SN - 0040-4039 VL - 52 IS - 46 SP - 6192 EP - 6195 PB - Elsevier CY - Oxford ER - TY - JOUR A1 - Stahlberg, Tim A1 - Lahmann, Henning T1 - A Paradigm of Prevention Humpty Dumpty, the War on Terror, and the Power of Preventive Detention in the United States, Israel, and Europe JF - The American journal of comparative law N2 - A decade into the proclaimed "global war on terror," states are still struggling with the phenomenon's locus and definition under the effective laws. Remarkably, preventive detention of suspected terrorists fluctuates between various legal regimes: In Europe, criminal law is predominantly used but special security orders are occasionally issued as well; Israel applies in part the law of international armed conflicts; and in the United States, detention under a new war premise has been claimed. This Article analyzes the response of the U.S. Supreme Court, the Israeli Supreme Court, and the European Court of Human Rights to legislative and executive policies asserting the power of preventive detention in the aftermath of September 11, 2001. The comparison exposes significant differences with regard to the application of international law, and most prominently concerning the underlying question of whether the struggle against terrorism should be considered a "war," or, perhaps more traditionally, a fight against crime. Despite the substantial discrepancies in these three jurisdictions, this Article argues that the similarities are actually more striking. Whereas no court has accepted any attempt to fight terrorism outside the bounds of law, the judges have not hesitated to stretch and blur the pertinent frameworks by extensive interpretation. Ultimately, it is questionable whether on account of the individual's rights the resulting flexibilities and uncertainties are justifiable. "I don't know what you mean by 'glory'," Alice said. Humpty Dumpty smiled contemptuously. "Of course you don't till I tell you. I meant 'there's a nice knock-down argument for you!" "But 'glory' doesn't mean 'a nice knock-down argument" Alice objected. "When I use a word," Humpty Dumptysaid, in rather a scornful tone, "it means just what I choose it to mean - neither more nor less." "The question is," said Alice, "whether you can make words mean different things." "The question is," said Humpty Dumpty, "which is to be master that's all." Y1 - 2011 U6 - https://doi.org/10.5131/AJCL.2010.0034 SN - 0002-919X VL - 59 IS - 4 SP - 1051 EP - 1087 PB - American Society of Comparative Law CY - Berkeley ER -