TY - JOUR A1 - Schlägel, Ulrike E. A1 - Mädlow, Wolfgang T1 - All-season space use by non-native resident Mandarin Ducks (Aix galericulata) in northeastern Germany JF - Journal of ornithology / publ. by Deutsche Ornithologen-Gesellschaft N2 - Patterns of space use are often subject to large temporal and individual-level variation, due to seasonality in behaviour and environmental conditions as well as age- or sex-specific needs. Especially in temperate regions, seasonality likely influences space use even in non-migratory birds. In waterfowl of the family Anatidae, however, few studies have analyzed space use of the same individuals across the full annual cycle. We used a resident population of Mandarin Ducks (Aix galericulata) in northeast Germany to study their year-round space use in relation to season, sex, and age. We marked 172 birds with colour rings and surveyed relevant water bodies for re-encounters for several years. As space-use patterns we derived home ranges from minimum convex polygons and the number of water bodies used by individual birds. Our analysis revealed that individuals shifted their space use between seasons, in particular extending their home ranges during the non-breeding season. Between years, in contrast, birds tended to show season-specific site fidelity. Sex differences were apparent during both breeding and non-breeding season, males consistently having larger home ranges and using slightly more water bodies. No difference was found between first-year and adult birds. Our study demonstrates that mark-resighting can provide valuable information about space use in species with suitable behaviour and readily accessible habitat. In such cases, it may be a valid alternative to more expensive GPS-tracking or short-term manual radio telemetry, particularly within citizen-science projects. N2 - Raumnutzungsmuster von Vögeln zeigen häufig große zeitliche und individuelle Variationen in Abhängigkeit vom saisonalen Verhalten und von Umweltbedingungen, aber auch alters- und geschlechtsspezifischen Ansprüchen. In gemäßigten Klimazonen können jahreszeitliche Einflussfaktoren die Raumnutzung auch von nicht ziehenden Arten bestimmen. Für Entenvögel (Anatidae) liegen bisher jedoch nur wenige Studien vor, die die Raumnutzung von Individuen über den gesamten Jahresverlauf hinweg betrachten. Wir untersuchten die ganzjährige Raumnutzung einer Standvogel-Population der Mandarinente (Aix galericulata) in Abhängigkeit von Jahreszeit, Geschlecht und Alter der Vögel. Wir markierten 172 Vögel mit Farbringen und kontrollierten mehrere Jahre lang die relevanten Gewässer, um Ringablesungen zu erzielen. Zur Analyse der Raumnutzung ermittelten wir Minimum-Convex-Polygone und die Anzahl der von den einzelnen Individuen genutzten Gewässer. Unsere Auswertung zeigte, dass die von den Vögeln genutzten Aktionsräume sich mit den Jahreszeiten veränderten. Insbesondere vergrößerte sich das besuchte Gebiet außerhalb der Brutzeit. Beim Vergleich mehrerer Jahre tendierten die Vögel zu einer saisonspezifischen Gebietstreue. Geschlechterunterschiede zeigten sich sowohl innerhalb als auch außerhalb der Brutzeit, wobei die Männchen stets größere Gebiete und eine größere Zahl an Gewässern nutzten. Zwischen Vögeln im ersten Lebensjahr und Adulten wurden keine Unterschiede gefunden. Unsere Untersuchung zeigt, dass Farbberingungsprogramme wertvolle Informationen zur Raumnutzung bei Arten liefern können, deren Verhalten dafür geeignet ist und die in gut zugänglichen Lebensräumen vorkommen. In diesen Fällen kann die Farbberingung eine geeignete Alternative zur teureren GPS- oder manuellen Telemetrie sein, vor allem wenn die vereinte Kraft von Amateurornithologen in die Untersuchungen einbezogen werden kann. KW - Anatidae KW - Aix galericulata KW - Home range KW - Site fidelity KW - Movement KW - Seasonality Y1 - 2021 U6 - https://doi.org/10.1007/s10336-021-01932-7 SN - 2193-7192 SN - 2193-7206 VL - 163 IS - 1 SP - 71 EP - 82 PB - Springer CY - Berlin ER - TY - JOUR A1 - Nakamura, Yasunori A1 - Steup, Martin A1 - Colleoni, Christophe A1 - Iglesias, Alberto A. A1 - Bao, Jinsong A1 - Fujita, Naoko A1 - Tetlow, Ian T1 - Molecular regulation of starch metabolism JF - Plant molecular biology : an international journal of fundamental research and genetic engineering Y1 - 2022 U6 - https://doi.org/10.1007/s11103-022-01253-0 SN - 0167-4412 SN - 1573-5028 VL - 108 IS - 4-5 SP - 289 EP - 290 PB - Springer CY - Dordrecht ER - TY - JOUR A1 - Kath, Nadja Jeanette A1 - Gaedke, Ursula A1 - van Velzen, Ellen T1 - The double-edged sword of inducible defences: costs and benefits of maladaptive switching from the individual to the community level JF - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe N2 - Phenotypic plasticity can increase individual fitness when environmental conditions change over time. Inducible defences are a striking example, allowing species to react to fluctuating predation pressure by only expressing their costly defended phenotype under high predation risk. Previous theoretical investigations have focused on how this affects predator–prey dynamics, but the impact on competitive outcomes and broader community dynamics has received less attention. Here we use a small food web model, consisting of two competing plastic autotrophic species exploited by a shared consumer, to study how the speed of inducible defences across three trade-off constellations affects autotroph coexistence, biomasses across trophic levels, and temporal variability. Contrary to the intuitive idea that faster adaptation increases autotroph fitness, we found that higher switching rates reduced individual fitness as it consistently provoked more maladaptive switching towards undefended phenotypes under high predation pressure. This had an unexpected positive impact on the consumer, increasing consumer biomass and lowering total autotroph biomass. Additionally, maladaptive switching strongly reduced autotroph coexistence through an emerging source-sink dynamic between defended and undefended phenotypes. The striking impact of maladaptive switching on species and food web dynamics indicates that this mechanism may be of more critical importance than previously recognized. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - 1288 Y1 - 2022 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus4-572006 SN - 1866-8372 IS - 1288 ER - TY - JOUR A1 - Agne, Stefanie A1 - Preick, Michaela A1 - Straube, Nicolas A1 - Hofreiter, Michael T1 - Simultaneous Barcode Sequencing of Diverse Museum Collection Specimens Using a Mixed RNA Bait Set JF - Frontiers in Ecology and Evolution N2 - A growing number of publications presenting results from sequencing natural history collection specimens reflect the importance of DNA sequence information from such samples. Ancient DNA extraction and library preparation methods in combination with target gene capture are a way of unlocking archival DNA, including from formalin-fixed wet-collection material. Here we report on an experiment, in which we used an RNA bait set containing baits from a wide taxonomic range of species for DNA hybridisation capture of nuclear and mitochondrial targets for analysing natural history collection specimens. The bait set used consists of 2,492 mitochondrial and 530 nuclear RNA baits and comprises specific barcode loci of diverse animal groups including both invertebrates and vertebrates. The baits allowed to capture DNA sequence information of target barcode loci from 84% of the 37 samples tested, with nuclear markers being captured more frequently and consensus sequences of these being more complete compared to mitochondrial markers. Samples from dry material had a higher rate of success than wet-collection specimens, although target sequence information could be captured from 50% of formalin-fixed samples. Our study illustrates how efforts to obtain barcode sequence information from natural history collection specimens may be combined and are a way of implementing barcoding inventories of scientific collection material. KW - target capture KW - type specimens KW - molecular species identification KW - museum specimens KW - cross-species capture Y1 - 2022 U6 - https://doi.org/10.3389/fevo.2022.909846 SN - 2296-701X VL - 10 PB - Frontiers Media S.A. CY - Lausanne, Schweiz ER - TY - JOUR A1 - Apriyanto, Ardha A1 - Ajambang, Walter T1 - Transcriptomic dataset for early inflorescence stages of oil palm in response to defoliation stress JF - Data in Brief N2 - Oil palm breeding and seed development have been hindered due to the male parent's incapacity to produce male inflorescence as a source of pollen under normal conditions. On the other hand, a young oil palm plantation has a low pollination rate due to a lack of male flowers. These are the common problem of sex ratio in the oil palm industry. Nevertheless, the regulation of sex ratio in oil palm plants is a complex mechanism and remains an open question until now. Researchers have previously used complete defoliation to induce male inflorescences, but the biological and molecular mechanisms underlying this morphological change have yet to be discovered. Here, we present an RNA-seq dataset from three early stages of an oil palm inflorescence under normal conditions and complete defoliation stress. This transcriptomic dataset is a valuable resource to improve our understanding of sex determination mechanisms in oil palm inflorescence. KW - Complete defoliation KW - Flower development KW - Leaf axil KW - NGS KW - RNA-seq KW - Sex KW - determination Y1 - 2022 U6 - https://doi.org/10.1016/j.dib.2022.107914 SN - 2352-3409 VL - 41 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Parry, Victor A1 - Schlägel, Ulrike E. A1 - Tiedemann, Ralph A1 - Weithoff, Guntram T1 - Behavioural Responses of Defended and Undefended Prey to Their Predator BT - A Case Study of Rotifera JF - Biology N2 - Predation is a strong species interaction causing severe harm or death to prey. Thus, prey species have evolved various defence strategies to minimize predation risk, which may be immediate (e.g., a change in behaviour) or transgenerational (morphological defence structures). We studied the behaviour of two strains of a rotiferan prey (Brachionus calyciflorus) that differ in their ability to develop morphological defences in response to their predator Asplanchna brightwellii. Using video analysis, we tested: (a) if two strains differ in their response to predator presence and predator cues when both are undefended; (b) whether defended individuals respond to live predators or their cues; and (c) if the morphological defence (large spines) per se has an effect on the swimming behaviour. We found a clear increase in swimming speed for both undefended strains in predator presence. However, the defended specimens responded neither to the predator presence nor to their cues, showing that they behave indifferently to their predator when they are defended. We did not detect an effect of the spines on the swimming behaviour. Our study demonstrates a complex plastic behaviour of the prey, not only in the presence of their predator, but also with respect to their defence status. KW - animal behaviour KW - transgenerational response KW - Brachionus calyciflorus KW - Asplanchna brightwellii KW - video analysis Y1 - 2022 U6 - https://doi.org/10.3390/biology11081217 SN - 2079-7737 VL - 11 IS - 8 PB - MDPI CY - Basel, Schweiz ER - TY - JOUR A1 - Wicaksono, Wisnu Adi A1 - Braun, Maria A1 - Bernhardt, Jörg A1 - Riedel, Katharina A1 - Cernava, Tomislav A1 - Berg, Gabriele T1 - Trade-off for survival BT - microbiome response to chemical exposure combines activation of intrinsic resistances and adapted metabolic activity JF - Environment international : a journal of science, technology, health, monitoring and policy N2 - The environmental micmbiota is increasingly exposed to chemical pollution. While the emergence of multi-resistant pathogens is recognized as a global challenge, our understanding of antimicrobial resistance (AMR) development from native microbiomes and the risks associated with chemical exposure is limited. By implementing a lichen as a bioindicator organism and model for a native microbiome, we systematically examined responses towards antimicrobials (colistin, tetracycline, glyphosate, and alkylpyrazine). Despite an unexpectedly high resilience, we identified potential evolutionary consequences of chemical exposure in terms of composition and functioning of native bacterial communities. Major shifts in bacterial composition were observed due to replacement of naturally abundant taxa; e.g. Chthoniobacterales by Pseudomonadales. A general response, which comprised activation of intrinsic resistance and parallel reduction of metabolic activity at RNA and protein levels was deciphered by a multi-omics approach. Targeted analyses of key taxa based on metagenome-assembled genomes reflected these responses but also revealed diversified strategies of their players. Chemical-specific responses were also observed, e.g., glyphosate enriched bacterial r-strategists and activated distinct ARGs. Our work demonstrates that the high resilience of the native micmbiota toward antimicrobial exposure is not only explained by the presence of antibiotic resistance genes but also adapted metabolic activity as a trade-off for survival. Moreover, our results highlight the importance of native microbiomes as important but so far neglected AMR reservoirs. We expect that this phenomenon is representative for a wide range of environmental microbiota exposed to chemicals that potentially contribute to the emergence of antibiotic-resistant bacteria from natural environments. Y1 - 2022 U6 - https://doi.org/10.1016/j.envint.2022.107474 SN - 1873-6750 VL - 168 PB - Elsevier Science CY - Amsterdam [u.a.] ER - TY - JOUR A1 - Pawlak, Julia A1 - Noetzel, Dominique Christian A1 - Drago, Claudia A1 - Weithoff, Guntram T1 - Assessing the toxicity of polystyrene beads and silica particles on the microconsumer Brachionus calyciflorus at different timescales JF - Frontiers in Environmental Science N2 - Environmental pollution by microplastics has become a severe problem in terrestrial and aquatic ecosystems and, according to actual prognoses, problems will further increase in the future. Therefore, assessing and quantifying the risk for the biota is crucial. Standardized short-term toxicological procedures as well as methods quantifying potential toxic effects over the whole life span of an animal are required. We studied the effect of the microplastic polystyrene on the survival and reproduction of a common freshwater invertebrate, the rotifer Brachionus calyciflorus, at different timescales. We used pristine polystyrene spheres of 1, 3, and 6 µm diameter and fed them to the animals together with food algae in different ratios ranging from 0 to 50% nonfood particles. As a particle control, we used silica to distinguish between a pure particle effect and a plastic effect. After 24 h, no toxic effect was found, neither with polystyrene nor with silica. After 96 h, a toxic effect was detectable for both particle types. The size of the particles played a negligible role. Studying the long-term effect by using life table experiments, we found a reduced reproduction when the animals were fed with 3 µm spheres together with similar-sized food algae. We conclude that the fitness reduction is mainly driven by the dilution of food by the nonfood particles rather than by a direct toxic effect. KW - microplastics KW - rotifer KW - freshwater KW - natural particle KW - toxicity KW - environmental pollution Y1 - 2022 U6 - https://doi.org/10.3389/fenvs.2022.955425 SN - 2296-665X SP - 1 EP - 11 PB - Frontiers CY - Lausanne, Schweiz ER - TY - JOUR A1 - Jänicke, Clemens A1 - Goddard, Adam A1 - Stein, Susanne A1 - Steinmann, Horst-Henning A1 - Lakes, Tobia A1 - Nendel, Claas A1 - Müller, Daniel T1 - Field-level land-use data reveal heterogeneous crop sequences with distinct regional differences in Germany JF - European journal of agronomy N2 - Crop cultivation intensifies globally, which can jeopardize biodiversity and the resilience of cropping systems. We investigate changes in crop rotations as one intensification metric for half of the croplands in Germany with annual field-level land-use data from 2005 to 2018. We proxy crop rotations with crop sequences and compare how these sequences changed among three seven-year periods. The results reveal an overall high diversity of crop sequences in Germany. Half of the cropland has crop sequences with four or more crops within a seven-year period, while continuous cultivation of the same crop is present on only 2% of the cropland. Larger farms tend to have more diverse crop sequences and organic farms have lower shares of cereal crops. In three federal states, crop rotations became less structurally diverse over time, i.e. the number of crops and the number of changes between crops decreased. In one state, structural diversity increased and the proportion of monocropping decreased. The functional diversity of the crop sequences, which measures the share of winter and spring crops as well as the share of leaf and cereal crops per sequence, remained largely stable. Trends towards cereal-or leaf -crop dominated sequences varied between the states, and no clear overall dynamic could be observed. However, the share of winter crops per sequence decreased in all four federal states. Quantifying the dynamics of crop sequences at the field level is an important metric of land-use intensity and can reveal the patterns of land-use intensification. KW - crop production KW - crop rotation KW - cropping diversity KW - IACS KW - intensification KW - land-use intensity Y1 - 2022 U6 - https://doi.org/10.1016/j.eja.2022.126632 SN - 1161-0301 SN - 1873-7331 VL - 141 PB - Elsevier CY - Amsterdam ER - TY - JOUR A1 - Schweigel, Ulrike A1 - Batsios, Petros A1 - Müller-Taubenberger, Annette A1 - Gräf, Ralph A1 - Grafe, Marianne T1 - Dictyostelium spastin is involved in nuclear envelope dynamics during semi-closed mitosis JF - Nucleus N2 - Dictyostelium amoebae perform a semi-closed mitosis, in which the nuclear envelope is fenestrated at the insertion sites of the mitotic centrosomes and around the central spindle during karyokinesis. During late telophase the centrosome relocates to the cytoplasmic side of the nucleus, the central spindle disassembles and the nuclear fenestrae become closed. Our data indicate that Dictyostelium spastin (DdSpastin) is a microtubule-binding and severing type I membrane protein that plays a role in this process. Its mitotic localization is in agreement with a requirement for the removal of microtubules that would hinder closure of the fenestrae. Furthermore, DdSpastin interacts with the HeH/ LEM-family protein Src1 in BioID analyses as well as the inner nuclear membrane protein Sun1, and shows subcellular co-localizations with Src1, Sun1, the ESCRT component CHMP7 and the IST1-like protein filactin, suggesting that the principal pathway of mitotic nuclear envelope remodeling is conserved between animals and Dictyostelium amoebae. KW - Spastin KW - LEM-domain KW - ESCRT KW - sun1 KW - dictyostelium KW - nuclear envelope KW - mitosis Y1 - 2022 U6 - https://doi.org/10.1080/19491034.2022.2047289 SN - 1949-1034 SN - 1949-1042 VL - 13 IS - 1 SP - 144 EP - 154 PB - Taylor & Francis Group CY - Philadelphia ER -