TY - JOUR A1 - Ast, Cindy A1 - Schmälzlin, Elmar A1 - Löhmannsröben, Hans-Gerd A1 - van Dongen, Joost T. T1 - Optical oxygen micro- and nanosensors for plant applications JF - Sensors N2 - Pioneered by Clark's microelectrode more than half a century ago, there has been substantial interest in developing new, miniaturized optical methods to detect molecular oxygen inside cells. While extensively used for animal tissue measurements, applications of intracellular optical oxygen biosensors are still scarce in plant science. A critical aspect is the strong autofluorescence of the green plant tissue that interferes with optical signals of commonly used oxygen probes. A recently developed dual-frequency phase modulation technique can overcome this limitation, offering new perspectives for plant research. This review gives an overview on the latest optical sensing techniques and methods based on phosphorescence quenching in diverse tissues and discusses the potential pitfalls for applications in plants. The most promising oxygen sensitive probes are reviewed plus different oxygen sensing structures ranging from micro-optodes to soluble nanoparticles. Moreover, the applicability of using heterologously expressed oxygen binding proteins and fluorescent proteins to determine changes in the cellular oxygen concentration are discussed as potential non-invasive cellular oxygen reporters. KW - oxygen sensor KW - biosensors KW - microsensors KW - nanosensors KW - endogenous sensor proteins KW - dual-frequency phase-modulation KW - phosphorescence quenching KW - plant science Y1 - 2012 U6 - https://doi.org/10.3390/s120607015 SN - 1424-8220 VL - 12 IS - 6 SP - 7015 EP - 7032 PB - MDPI CY - Basel ER - TY - JOUR A1 - Zabalza, Ana A1 - van Dongen, Joost T. A1 - Fröhlich, Anja A1 - Oliver, Sandra N. A1 - Faix, Benjamin A1 - Gupta, Kapuganti Jagadis A1 - Schmalzlin, Elmar A1 - Igal, Maria A1 - Orcaray, Luis A1 - Royuela, Mercedes A1 - Geigenberger, Peter T1 - Regulation of respiration and fermentation to control the plant internal oxygen concentration N2 - Plant internal oxygen concentrations can drop well below ambient even when the plant grows under optimal conditions. Using pea (Pisum sativum) roots, we show how amenable respiration adapts to hypoxia to save oxygen when the oxygen availability decreases. The data cannot simply be explained by oxygen being limiting as substrate but indicate the existence of a regulatory mechanism, because the oxygen concentration at which the adaptive response is initiated is independent of the actual respiratory rate. Two phases can be discerned during the adaptive reaction: an initial linear decline of respiration is followed by a nonlinear inhibition in which the respiratory rate decreased progressively faster upon decreasing oxygen availability. In contrast to the cytochrome c pathway, the inhibition of the alternative oxidase pathway shows only the linear component of the adaptive response. Feeding pyruvate to the roots led to an increase of the oxygen consumption rate, which ultimately led to anoxia. The importance of balancing the in vivo pyruvate availability in the tissue was further investigated. Using various alcohol dehydrogenase knockout lines of Arabidopsis (Arabidopsis thaliana), it was shown that even under aerobic conditions, alcohol fermentation plays an important role in the control of the level of pyruvate in the tissue. Interestingly, alcohol fermentation appeared to be primarily induced by a drop in the energy status of the tissue rather than by a low oxygen concentration, indicating that sensing the energy status is an important component of optimizing plant metabolism to changes in the oxygen availability. Y1 - 2009 UR - http://www.plantphysiol.org/ U6 - https://doi.org/10.1104/pp.108.129288 SN - 0032-0889 ER - TY - JOUR A1 - Oliver, Sandra N. A1 - Lunn, John Edward A1 - Urbanczyk-Wochniak, Ewa A1 - Lytovchenko, Anna A1 - van Dongen, Joost T. A1 - Faix, Benjamin A1 - Schmälzlin, Elmar A1 - Fernie, Alisdair R. A1 - Schmäelzlin, E. A1 - Geigenberger, Peter T1 - Decreased expression of cytosolic pyruvate kinase in potato tubers leads to a decline in pyruvate resulting in an in vivo repression of the alternative oxidase N2 - The aim of this work was to investigate the effect of decreased cytosolic pyruvate kinase (PKc) on potato (Solanum tuberosum) tuber metabolism. Transgenic potato plants with strongly reduced levels of PKc were generated by RNA interference gene silencing under the control of a tuber-specific promoter. Metabolite profiling showed that decreased PKc activity led to a decrease in the levels of pyruvate and some other organic acids involved in the tricarboxylic acid cycle. Flux analysis showed that this was accompanied by changes in carbon partitioning, with carbon flux being diverted from glycolysis toward starch synthesis. However, this metabolic shift was relatively small and hence did not result in enhanced starch levels in the tubers. Although total respiration rates and the ATP to ADP ratio were largely unchanged, transgenic tubers showed a strong decrease in the levels of alternative oxidase (AOX) protein and a corresponding decrease in the capacity of the alternative pathway of respiration. External feeding of pyruvate to tuber tissue or isolated mitochondria resulted in activation of the AOX pathway, both in the wild type and the PKc transgenic lines, providing direct evidence for the regulation of AOX by changes in pyruvate levels. Overall, these results provide evidence for a crucial role of PKc in the regulation of pyruvate levels as well as the level of the AOX in heterotrophic plant tissue, and furthermore reveal that these parameters are interlinked in vivo. Y1 - 2008 UR - http://www.plantphysiol.org/content/148/3/1640.full U6 - https://doi.org/10.1104/pp.108.126516 ER - TY - GEN A1 - Löhmannsröben, Hans-Gerd A1 - Beck, Michael A1 - Hildebrandt, Niko A1 - Schmälzlin, Elmar A1 - van Dongen, Joost T. T1 - New challenges in biophotonics : laser-based fluoroimmuno analysis and in-vivo optical oxygen monitoring N2 - Two examples of our biophotonic research utilizing nanoparticles are presented, namely laser-based fluoroimmuno analysis and in-vivo optical oxygen monitoring. Results of the work include significantly enhanced sensitivity of a homogeneous fluorescence immunoassay and markedly improved spatial resolution of oxygen gradients in root nodules of a legume species. T3 - Zweitveröffentlichungen der Universität Potsdam : Mathematisch-Naturwissenschaftliche Reihe - paper 018 KW - Sauerstoff KW - Quantenpunkt KW - Lumineszenz KW - Immunoassay KW - Energietransfer KW - Fluoreszenz-Resonanz-Energie-Transfer KW - Nanopartikel KW - Lanthanoide KW - Optode KW - Förster Resonanz Energie Transfer KW - Biophotonik KW - biophotonics KW - nanoparticles KW - immunoassay KW - oxygen KW - optode Y1 - 2006 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:517-opus-10120 ER -